pycom17g22800

disease resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
21199445 .. 21200569
1125 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g22800.1

Sequence Viewer

Length: 1125 bp
ATGAACATTGCGATAAACCCTGATATACTCTTGCATCTAACATGTCTGAGAACACTAAATCTGAGTCGCTGCTGGTTCAAAGAACTACCGGAGGAGGTTGGAAAGTTTATACATTTGAGATATCTCAATTTATCTAGCAACGACGAGCTGGAAAGGTTGCCTGAGACGCTGTGTGATTTATCTAACTTGCAAACTTTGTTGATCAACGATTGTATGCGAATTAGAAAACTACCAGAGAGGATGGGGATGCTATTGAACTTAAGACACCTTCACATTGATTGTTCTTTTAATCTAGAGAGTTTGCCCAAGGGAATTGCAAAACTGACTTCTCTACAGACACTAGATATGCTCGTCCTACCACAGTATGACAACGAAGAAGCATTTAAGCTGGGAGATTTGAAAAATTTGAACAAGCTTGAAGGGTATCTTCATATATGTAGGTGTGGCAACCTAGAAGATGTGAATGAGGCTGAGAAAGCGGAACTCGTAAACAGAGGAAACCTTGTTGATTTGACTCTAGATTTTGATGGGAGTGAAGAGAGGGGACACGAAGATAAAATTATACTTGAAGCTTTACAACCACATCCGAATTTGGAATCTTTAGAGATTCGGAAGTATAGAGGCAGAACCGTGTCTCCAGATTGGATGATGAGTTTAACGAATTTGAGAAGGCTTATCCTGCATTCCTGCCTGGATTGTGAGTCTCTACCTCCTTTGGGGAAACTCCTGTCCCTTGAATCACTCGAAATATGTCATATGAAAAGCATGAAAAAGGTGGGGTGCGAGTTTTTGGGGATAGAAACCGGTGGTGCAGAAAAGTGCTGTTTAGTTTCATTCCCGAAACTGAGGGAACTTCGTTTTTCTTCCTTGTTCAAGTGGAATGCATGGGTAGGGGCATCAAAGTCCAAGAAAGAAGATAGTTCGATCCAAATCATGCCATGTCTCATGTCCTTAGAGATTGACTCCTGCTTTTGCGTAAAGACTTTGCCACACTTCTTGAAAGAGATACCGCTGCAGAATTTGACGATCAGCAAGTGTAAGATCCTCCAAAAACATTGCCAAATGTCGAAAGGAAAAGAGTGGTCCAAGATTTCTCACATCCCGAATATCAAATTTAACGTTTGA
Functional Annotation

Protein Analysis

375

Amino Acids

42.9

Weight (kDa)

6.85

Isoelectric Point (pI)

50.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 12 - 341 1.9e-30 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 130 - 253 2.7e-34 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0021196)

Species Orthologous Gene IDs
malus_domestica MD17G1224300.v1.1
prunus_persica Prupe.3G100000_v2.0.a1
pyrus_communis pycom17g22800
rosa_laevigata RLG00000019277 RLG00000019281

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 479, 1010
AclI AACGTT 1 cut(s) 1119
AclWI GGATC 2 cut(s) 919, 1036
AcsI RAATTY 5 cut(s) 403, 589, 661, 1018, 1112
AfiI CCNNNNNNNGG 1 cut(s) 716
AflII CTTAAG 1 cut(s) 259
AflIII ACRYGT 1 cut(s) 41
AgeI ACCGGT 1 cut(s) 803
AgsI TTSAA 9 cut(s) 79, 256, 400, 409, 419, 569, 737, 874, 1000
AjnI CCWGG 1 cut(s) 690
AloI GAACNNNNNNTCC 2 cut(s) 619, 651
AluBI AGCT 4 cut(s) 148, 388, 415, 572
AluI AGCT 4 cut(s) 148, 388, 415, 572
Alw26I GTCTC 4 cut(s) 158, 639, 708, 947
AlwI GGATC 2 cut(s) 919, 1036
ApeKI GCWGC 2 cut(s) 69, 1012
ApoI RAATTY 5 cut(s) 403, 589, 661, 1018, 1112
AsiGI ACCGGT 1 cut(s) 803
AspS9I GGNCC 1 cut(s) 1083
AvaII GGWCC 1 cut(s) 1083
BbvI GCAGC 2 cut(s) 56, 999
BccI CCATC 2 cut(s) 235, 521
BciT130I CCWGG 1 cut(s) 692
BclI TGATCA 1 cut(s) 201
BcoDI GTCTC 4 cut(s) 158, 639, 708, 947
BfaI CTAG 5 cut(s) 135, 293, 341, 452, 518
BfmI CTRYAG 2 cut(s) 332, 1013
BfrI CTTAAG 1 cut(s) 259
BisI GCNGC 2 cut(s) 70, 1013
BlsI GCNGC 2 cut(s) 71, 1014
Bme1390I CCNGG 1 cut(s) 692
Bme18I GGWCC 1 cut(s) 1083
BmgT120I GGNCC 1 cut(s) 1083
BmrFI CCNGG 1 cut(s) 692
BmsI GCATC 3 cut(s) 43, 237, 905
BplI GAGNNNNNCTC 2 cut(s) 947, 979
BpmI CTGGAG 1 cut(s) 621
BsaBI GATNNNNATC 1 cut(s) 929
BsaJI CCNNGG 1 cut(s) 306
BsaWI WCCGGW 2 cut(s) 88, 803
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 1 cut(s) 716
Bse118I RCCGGY 1 cut(s) 803
Bse3DI GCAATG 2 cut(s) 6, 1054
Bse8I GATNNNNATC 1 cut(s) 929
BseBI CCWGG 1 cut(s) 692
BseDI CCNNGG 1 cut(s) 306
BseGI GGATG 5 cut(s) 246, 252, 583, 651, 1098
BseJI GATNNNNATC 1 cut(s) 929
BseLI CCNNNNNNNGG 1 cut(s) 716
BseMI GCAATG 2 cut(s) 6, 1054
BseMII CTCAG 5 cut(s) 38, 53, 153, 462, 836
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 2 cut(s) 56, 999
BseYI CCCAGC 1 cut(s) 388
BsgI GTGCAG 1 cut(s) 831
BshTI ACCGGT 1 cut(s) 803
BsiSI CCGG 2 cut(s) 89, 804
BslFI GGGAC 2 cut(s) 558, 715
BslI CCNNNNNNNGG 1 cut(s) 716
BsmAI GTCTC 4 cut(s) 158, 639, 708, 947
BsmBI CGTCTC 1 cut(s) 158
BsmFI GGGAC 2 cut(s) 558, 715
BsmI GAATGC 2 cut(s) 682, 886
Bsp143I GATC 4 cut(s) 201, 924, 1026, 1041
BspACI CCGC 2 cut(s) 479, 1010
BspCNI CTCAG 5 cut(s) 39, 54, 154, 463, 837
BspMAI CTGCAG 1 cut(s) 1017
BspPI GGATC 2 cut(s) 919, 1036
BspTI CTTAAG 1 cut(s) 259
BsrDI GCAATG 2 cut(s) 6, 1054
BsrFI RCCGGY 1 cut(s) 803
BssAI RCCGGY 1 cut(s) 803
BssECI CCNNGG 1 cut(s) 306
BssMI GATC 4 cut(s) 201, 924, 1026, 1041
BssT1I CCWWGG 1 cut(s) 306
Bst2UI CCWGG 1 cut(s) 692
Bst4CI ACNGT 2 cut(s) 363, 631
Bst6I CTCTTC 1 cut(s) 531
BstAFI CTTAAG 1 cut(s) 259
BstDEI CTNAG 6 cut(s) 47, 62, 162, 471, 845, 952
BstF5I GGATG 5 cut(s) 246, 252, 583, 651, 1098
BstKTI GATC 4 cut(s) 204, 927, 1029, 1044
BstMAI GTCTC 4 cut(s) 158, 639, 708, 947
BstMBI GATC 4 cut(s) 201, 924, 1026, 1041
BstMWI GCNNNNNNNGC 3 cut(s) 166, 476, 679
BstNI CCWGG 1 cut(s) 692
BstNSI RCATGY 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 690
BstSFI CTRYAG 2 cut(s) 332, 1013
BstV1I GCAGC 2 cut(s) 56, 999
BstX2I RGATCY 1 cut(s) 1041
BstYI RGATCY 1 cut(s) 1041
BtsCI GGATG 5 cut(s) 246, 252, 583, 651, 1098
Cfr10I RCCGGY 1 cut(s) 803
Cfr13I GGNCC 1 cut(s) 1083
CseI GACGC 1 cut(s) 175
CspAI ACCGGT 1 cut(s) 803
CspCI CAANNNNNGTGG 2 cut(s) 978, 1013
CviAII CATG 6 cut(s) 42, 766, 885, 934, 939, 946
CviJI RGCY 6 cut(s) 148, 388, 415, 470, 572, 673
CviKI_1 RGCY 6 cut(s) 148, 388, 415, 470, 572, 673
DdeI CTNAG 6 cut(s) 47, 62, 162, 471, 845, 952
DpnI GATC 4 cut(s) 203, 926, 1028, 1043
DpnII GATC 4 cut(s) 201, 924, 1026, 1041
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
Eco130I CCWWGG 1 cut(s) 306
Eco32I GATATC 1 cut(s) 122
Eco47I GGWCC 1 cut(s) 1083
EcoRII CCWGG 1 cut(s) 690
EcoRV GATATC 1 cut(s) 122
EcoT14I CCWWGG 1 cut(s) 306
EcoT22I ATGCAT 1 cut(s) 886
ErhI CCWWGG 1 cut(s) 306
Esp3I CGTCTC 1 cut(s) 158
FaeI CATG 6 cut(s) 45, 769, 888, 937, 942, 949
FalI AAGNNNNNCTT 2 cut(s) 411, 443
FaqI GGGAC 2 cut(s) 558, 715
FatI CATG 6 cut(s) 41, 765, 884, 933, 938, 945
FauNDI CATATG 1 cut(s) 756
FbaI TGATCA 1 cut(s) 201
Fnu4HI GCNGC 2 cut(s) 70, 1013
FokI GGATG 5 cut(s) 253, 259, 570, 658, 1085
Fsp4HI GCNGC 2 cut(s) 70, 1013
FspBI CTAG 5 cut(s) 135, 293, 341, 452, 518
GluI GCNGC 2 cut(s) 70, 1013
GsaI CCCAGC 1 cut(s) 392
GsuI CTGGAG 1 cut(s) 621
HapII CCGG 2 cut(s) 89, 804
HgaI GACGC 1 cut(s) 175
Hin1II CATG 6 cut(s) 45, 769, 888, 937, 942, 949
HindIII AAGCTT 2 cut(s) 413, 570
HinfI GANTC 7 cut(s) 64, 514, 596, 607, 701, 737, 962
HpaII CCGG 2 cut(s) 89, 804
Hpy166II GTNNAC 1 cut(s) 490
Hpy188I TCNGA 4 cut(s) 48, 63, 588, 612
Hpy188III TCNNGA 6 cut(s) 293, 518, 638, 838, 997, 1102
Hpy8I GTNNAC 1 cut(s) 490
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 3 cut(s) 278, 413, 663
HpyCH4III ACNGT 2 cut(s) 363, 631
HpyCH4IV ACGT 1 cut(s) 1119
HpyCH4V TGCA 7 cut(s) 34, 190, 317, 682, 812, 884, 1015
HpyF10VI GCNNNNNNNGC 3 cut(s) 166, 476, 679
HpyF3I CTNAG 6 cut(s) 47, 62, 162, 471, 845, 952
HpySE526I ACGT 1 cut(s) 1119
Hsp92II CATG 6 cut(s) 45, 769, 888, 937, 942, 949
Ksp22I TGATCA 1 cut(s) 201
Kzo9I GATC 4 cut(s) 201, 924, 1026, 1041
Lsp1109I GCAGC 2 cut(s) 56, 999
LweI GCATC 3 cut(s) 43, 237, 905
MaeI CTAG 5 cut(s) 135, 293, 341, 452, 518
MaeII ACGT 1 cut(s) 1119
MalI GATC 4 cut(s) 203, 926, 1028, 1043
MboI GATC 4 cut(s) 201, 924, 1026, 1041
MboII GAAGA 7 cut(s) 386, 419, 467, 548, 563, 855, 926
MflI RGATCY 1 cut(s) 1041
MluCI AATT 9 cut(s) 127, 219, 312, 403, 558, 589, 661, 1018, 1112
MlyI GAGTC 4 cut(s) 73, 508, 710, 956
MmeI TCCRAC 1 cut(s) 79
Mph1103I ATGCAT 1 cut(s) 886
MseI TTAA 5 cut(s) 260, 288, 384, 656, 1116
MspA1I CMGCKG 1 cut(s) 1012
MspCI CTTAAG 1 cut(s) 259
MspI CCGG 2 cut(s) 89, 804
MspR9I CCNGG 1 cut(s) 692
Mva1269I GAATGC 2 cut(s) 682, 886
MvaI CCWGG 1 cut(s) 692
MwoI GCNNNNNNNGC 3 cut(s) 166, 476, 679
NdeI CATATG 1 cut(s) 756
NdeII GATC 4 cut(s) 201, 924, 1026, 1041
NlaIII CATG 6 cut(s) 45, 769, 888, 937, 942, 949
NsiI ATGCAT 1 cut(s) 886
NspI RCATGY 1 cut(s) 45
PciI ACATGT 1 cut(s) 41
PctI GAATGC 2 cut(s) 682, 886
PfeI GAWTC 3 cut(s) 596, 607, 737
PinAI ACCGGT 1 cut(s) 803
PkrI GCNGC 2 cut(s) 71, 1014
PleI GAGTC 4 cut(s) 72, 508, 709, 956
PpsI GAGTC 4 cut(s) 72, 508, 709, 956
PscI ACATGT 1 cut(s) 41
Psp1406I AACGTT 1 cut(s) 1119
Psp6I CCWGG 1 cut(s) 690
PspFI CCCAGC 1 cut(s) 388
PspGI CCWGG 1 cut(s) 690
PspPI GGNCC 1 cut(s) 1083
PstI CTGCAG 1 cut(s) 1017
PsuI RGATCY 1 cut(s) 1041
SaqAI TTAA 5 cut(s) 260, 288, 384, 656, 1116
SatI GCNGC 2 cut(s) 70, 1013
Sau3AI GATC 4 cut(s) 201, 924, 1026, 1041
Sau96I GGNCC 1 cut(s) 1083
SchI GAGTC 4 cut(s) 73, 508, 710, 956
ScrFI CCNGG 1 cut(s) 692
SfaNI GCATC 3 cut(s) 43, 237, 905
SfcI CTRYAG 2 cut(s) 332, 1013
SinI GGWCC 1 cut(s) 1083
SmlI CTYRAG 1 cut(s) 259
SmoI CTYRAG 1 cut(s) 259
Sse9I AATT 9 cut(s) 127, 219, 312, 403, 558, 589, 661, 1018, 1112
SsiI CCGC 2 cut(s) 479, 1010
SspMI CTAG 5 cut(s) 135, 293, 341, 452, 518
StyD4I CCNGG 1 cut(s) 690
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 2 cut(s) 363, 631
TaiI ACGT 1 cut(s) 1122
TaqI TCGA 3 cut(s) 744, 923, 1067
TasI AATT 9 cut(s) 127, 219, 312, 403, 558, 589, 661, 1018, 1112
TfiI GAWTC 3 cut(s) 596, 607, 737
Tru1I TTAA 5 cut(s) 260, 288, 384, 656, 1116
Tru9I TTAA 5 cut(s) 260, 288, 384, 656, 1116
TseI GCWGC 2 cut(s) 69, 1012
TspDTI ATGAA 5 cut(s) 17, 419, 773, 782, 822
Vha464I CTTAAG 1 cut(s) 259
VpaK11BI GGWCC 1 cut(s) 1083
XapI RAATTY 5 cut(s) 403, 589, 661, 1018, 1112
XbaI TCTAGA 2 cut(s) 292, 517
XceI RCATGY 1 cut(s) 45
XspI CTAG 5 cut(s) 135, 293, 341, 452, 518
Zsp2I ATGCAT 1 cut(s) 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.