Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009515

Physical Location & Seq

Genomic Coordinates Reverse (-)

19452765 .. 19460787

Gene Structure 8023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G177800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2766 bp

ATGGCCGGGATTGTGAAACCGCCGGGGGCTTTCGCAGTGACGCCACACAAGGTCTCAGTCTGCATATTGCTTCAGGTCTACGCGCCGGCCGCTCAAATCTCAGTCCCCTTCCCTTTCTCCACCGTCAATCAGCACAACCGCCTCGGCCTCTTCTTGTTGTCTCTCACTAAGTCTTATGATGATATTTTTGAGCCCAAATTGGATGAGCTTATACATCAATTGAGGGGGATTGGGGGCTTATTGAACTATTGGTTAACCGACCATTTAACCAGTAAGCTGTTGGCTCTGTCTTCGCCGGATGATTTGTTTAACTTCTTTAGTGATATGCGAGGAATCCTTGGCGGTCCCGAAGCAGGTGTTCTGGAAGATGACCAAGTCATTTTGGATCCAAATAGTCACCTGGGGATGTTTCTTCGTCGTTGCATACTTGCGTTTAATCTTTTATCCTTTGAGGGTGCATGCCATCTTTTGACAAGTATAGGGATGTACTGTAAAGAAGCTATCTCAAGTTGTCCTCCGTATGAGGCACCTCACTTAGATGATTCTAGTAATGATTTAGAAACACCTCCGGAATATGAAAACATGGAATTGGAGAATCTTGTTTTTGAGAAAGTCACTGAAGAAATCGAAGCAAGGGAAAGAGCTGGTGGAAGAGTTTCTTTTCATCTTCATGCACCCCAAGCACTTGTTGGATTGGTTGAAGATATTGAGGTCCCTGGTGACCCAGAATTCAAACATGGCGGCAAACTTAGAGAAGCTTGTCATTATGCACATCCTACAAGCAATACATTAAGAGATCTTGATCCCAGTGGTGGCATATTCCTACGAACTAACTGGCAGATACAAGGATTTCTACAGGAGCAAGCTGATGCACTTGAAAAACAGGGGAGCTCTTTCTCTTTAAATGATTTTGAACTTATGCTAAGGCAGCTTCAAAAACTGGCACCTGAGCTACATCGCGTTCACTTCTTGCGTTACTTGAATGGTTTGTATCATGATGATTGTATTGCTGCTTTGGAGAATGTTCACCGCTATTTTGATTACAGTGCAGGGATTGAAGGATTTGATTTTGTTCCTCCTGCATCTGGTTGCAATACCTTTGGAAGATATGAAATTGCCTTGCTTTGTTTGGGAATGATGCATTTCCATTTTGGGCACCCGAAACAAGCTTTGGAGGTTTTGACTGAAGCAGTACATTTTTCTCAACTGCAAAGTAATGACACATGTCTTGCTTACACCTTAGCGGCTATCTGCAATTTGTTGTCCGAAACTGGTATATCTAGTACAACTGGAATACTGGGCTCGTCATATTCCCCTTTGACCAGAATAGGCATTTCACTGTCTGTCCAGCAACAACTATTTGTTCTCTTAAGGGGGTCTCTGAAGAGGGCAGAAAATTTGAAGTTAAAGCGTTTAGTGGCGTCCAATCATCTTGCGATGGCTAAATTTGATTTAACGCATGTGCAAAGGCCTCTAGTTTCATTTGGTCCCAAGGCTTCAATGAAGCTTAGAACAAGTCCAATTAATGTTTGCAAGGAACTTAGATTGAGTTCTCAATTGATTAGTGAGTTTGGGTCCGAAACTTCTTCAATGACAACTGATGGTGCTTTTAGTACTGCATGGCTTAAGAACTTACAGAAGCCAATGGATTCACAAGTCTTGTCACAAGAAAGTGGATCAGGAAGCAATAATGCTTTCCAGTTCTGTGCACAACCAAGTTCTGTCCCTGCATCTGTGTTGCAATTAGTAGGCTCTTCATACTTACTTCGTGCCACTGCATGGGAAATATATGGCAGTTCCTCTCTTGCTAGATTTAATGCGCTTGTTCATGCAACTTGTTTTCCTGATGTTTCAAGTTCATCTGACACAGCATTAGCATATTTGAAGCTTATCCAACATCTAGCAGTTTTTAAAGGATACAAAGAGGCATTTGCTGCTCTTAAAATAGCTGCAGAGAAGTTTTTATCTGTCTCAAAATCACGAATCTTGTTACTAAAACTTCAGCTCCTCCATGAGCGTGCTCTACATAGAGGACATTTGAAGCTTGCCCAACAAGTATGTGATGAGCTTGGAGTCCTGGCATCATCTGTCACTGGTGTGGATATGGAATTGAAGACGGAAGCAAGCCTTCGAAATGCTCGTACTTTGCTTGCGGCAAATCAGTTCAGTGAGGCAGCAGCTGTAGCACACTCACTCTTTTGCATGTGTTACAAATTCAATATGCAAGTTGAAAATGCCAGTGTTCTTCTATTGCTAGCTGAAATCCACAAGAAATCAGGCAATGCTGTTTTAGGTCTTCCGTACGCATTGGCAAGCCTCTCATTTTGCCAGTCATTTAACTTGGATCTTCTTAAAGCATCAGCCACACTCACACTAGCCGAGTTGTGGCTATCACTTGGATCAAATCATGCAAAAAGGGCCTTGAGCCTTGTGCATGGGGCCTTTCCTATGATTCTTGGTCAAGGGGGTTTGGAGCTCCGTGCTCGGGCCTTCATTGTAGAAGCAAAATGCTATCTATCTGATCCAAGCTTTTCCGTTTTTGAAGATTCTGATATTGTGCTGGATCCTCTGAGACAAGCTTCAGATGAGCTTCAATTGCTGGAGTATCATGAATTGGCGGCGGAAGCGTTCTATTTAACGGCAATGGTCTTTGACAAACTGGGAAGACTAGAGGACAGAGAAGACGCTGCAGCTTCATTTAAGAAACACATTCTGGCCCTTGAGAATCCGCAAGATGAGGAAGATCCTCTCGCCAACATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04657 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04657 map04914 map05166

Pfam Domains

Protein Families

ANAPC5

Protein Analysis

922

Amino Acids

101.46

Weight (kDa)

5.69

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06590
fragaria_vesca	FvH4_6g38720 FvH4_6g38720 FvH4_6g38720 FvH4_6g38720
malus_domestica	MD09G1148300.v1.1 MD17G1134600.v1.1
prunus_persica	Prupe.3G177800_v2.0.a1 Prupe.3G177800_v2.0.a1
pyrus_communis	pycom09g06800
rosa_chinensis	RchiOBHm_Chr2g0152251
rosa_laevigata	RLG00000020624
rosa_multiflora	Rmu_sc0003043.1_g000005
rosa_roxburghii	Rroxscaffold_2G00095840
rosa_rugosa	Rorug02G0431700 Rorug02G0431800
rosa_samantha	Rh2AG493500 Rh2BG505800 Rh2CG479700 Rh2DG516900
rosa_wichuraiana	Rw2G040540 Rw2G040580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	344
Acc36I	ACCTGC	1 cut(s)	344
AccB1I	GGYRCC	3 cut(s)	526, 943, 1155
AccB7I	CCANNNNNTGG	1 cut(s)	1779
AccBSI	CCGCTC	1 cut(s)	92
AccI	GTMKAC	1 cut(s)	78
AccII	CGCG	2 cut(s)	83, 960
AccIII	TCCGGA	1 cut(s)	568
AcoI	YGGCCR	2 cut(s)	3, 87
AcsI	RAATTY	4 cut(s)	728, 1396, 1445, 2213
AcuI	CTGAAG	6 cut(s)	56, 639, 1206, 1403, 1985, 2565
AcyI	GRCGYC	2 cut(s)	41, 1421
AfaI	GTAC	6 cut(s)	488, 1194, 1285, 1615, 2143, 2303
AfiI	CCNNNNNNNGG	6 cut(s)	353, 812, 1085, 1779, 2385, 2485
AflII	CTTAAG	2 cut(s)	1369, 1625
AflIII	ACRYGT	1 cut(s)	1223
AjnI	CCWGG	3 cut(s)	399, 715, 2076
AjuI	GAANNNNNNNTTGG	2 cut(s)	1154, 1186
AleI	CACNNNNGTG	1 cut(s)	2096
Alw21I	GWGCWC	5 cut(s)	893, 1711, 2023, 2478, 2485
Alw26I	GTCTC	5 cut(s)	58, 165, 1383, 1975, 2566
Alw44I	GTGCAC	1 cut(s)	1707
AlwNI	CAGNNNCTG	1 cut(s)	2180
Ama87I	CYCGRG	1 cut(s)	2484
Aor13HI	TCCGGA	1 cut(s)	568
AoxI	GGCC	8 cut(s)	3, 87, 145, 1469, 2418, 2439, 2487, 2715
ApaLI	GTGCAC	1 cut(s)	1707
ApeKI	GCWGC	8 cut(s)	928, 1010, 1934, 1949, 2174, 2177, 2687, 2690
ApoI	RAATTY	4 cut(s)	728, 1396, 1445, 2213
AseI	ATTAAT	1 cut(s)	1524
Asp700I	GAANNNNTTC	1 cut(s)	655
AspLEI	GCGC	2 cut(s)	85, 1822
AspS9I	GGNCC	8 cut(s)	344, 712, 1487, 1575, 2418, 2439, 2487, 2716
AsuC2I	CCSGG	2 cut(s)	7, 24
AsuHPI	GGTGA	3 cut(s)	389, 731, 1019
AsuII	TTCGAA	1 cut(s)	2131
AsuNHI	GCTAGC	1 cut(s)	2254
AvaI	CYCGRG	1 cut(s)	2484
AvaII	GGWCC	4 cut(s)	344, 712, 1487, 1575
BaeGI	GKGCMC	2 cut(s)	1158, 1711
BamHI	GGATCC	2 cut(s)	385, 2563
BanI	GGYRCC	3 cut(s)	526, 943, 1155
BanII	GRGCYC	4 cut(s)	195, 893, 1304, 2478
BbsI	GAAGAC	5 cut(s)	282, 2120, 2288, 2671, 2688
Bbv12I	GWGCWC	5 cut(s)	893, 1711, 2023, 2478, 2485
BbvI	GCAGC	8 cut(s)	940, 997, 1921, 1936, 2186, 2189, 2674, 2702
BccI	CCATC	3 cut(s)	471, 1432, 1595
BceAI	ACGGC	1 cut(s)	2655
BciT130I	CCWGG	3 cut(s)	401, 717, 2078
BciVI	GTATCC	1 cut(s)	1910
BcnI	CCSGG	2 cut(s)	7, 24
BcoDI	GTCTC	5 cut(s)	58, 165, 1383, 1975, 2566
BfaI	CTAG	8 cut(s)	546, 1281, 1475, 1809, 1901, 2255, 2375, 2669
BfmI	CTRYAG	4 cut(s)	854, 1950, 2181, 2688
BfrI	CTTAAG	2 cut(s)	1369, 1625
BfuAI	ACCTGC	1 cut(s)	344
BfuI	GTATCC	1 cut(s)	1910
BglII	AGATCT	1 cut(s)	796
BmcAI	AGTACT	1 cut(s)	1615
Bme1390I	CCNGG	5 cut(s)	7, 24, 401, 717, 2078
Bme18I	GGWCC	4 cut(s)	344, 712, 1487, 1575
BmeT110I	CYCGRG	1 cut(s)	2484
BmgT120I	GGNCC	8 cut(s)	344, 712, 1487, 1575, 2418, 2439, 2487, 2716
BmrFI	CCNGG	5 cut(s)	7, 24, 401, 717, 2078
BmrI	ACTGGG	3 cut(s)	801, 1307, 2669
BmsI	GCATC	6 cut(s)	859, 1091, 1128, 1739, 2090, 2366
BmtI	GCTAGC	1 cut(s)	2258
BmuI	ACTGGG	3 cut(s)	801, 1307, 2669
BoxI	GACNNNNGTC	1 cut(s)	1224
BpiI	GAAGAC	5 cut(s)	282, 2120, 2288, 2671, 2688
BpmI	CTGGAG	1 cut(s)	2621
Bpu10I	CCTNAGC	3 cut(s)	923, 948, 1240
Bpu14I	TTCGAA	1 cut(s)	2131
BpuEI	CTTGAG	3 cut(s)	490, 2443, 2741
BpuMI	CCSGG	2 cut(s)	7, 24
BsaBI	GATNNNNATC	1 cut(s)	801
BsaHI	GRCGYC	2 cut(s)	41, 1421
BsaI	GGTCTC	2 cut(s)	58, 1383
BsaJI	CCNNGG	6 cut(s)	23, 142, 337, 400, 715, 1491
BsaWI	WCCGGW	1 cut(s)	568
BsaXI	ACNNNNNCTCC	2 cut(s)	1989, 2019
Bsc4I	CCNNNNNNNGG	6 cut(s)	353, 812, 1085, 1779, 2385, 2485
Bse118I	RCCGGY	1 cut(s)	85
Bse3DI	GCAATG	2 cut(s)	2287, 2649
Bse8I	GATNNNNATC	1 cut(s)	801
BseAI	TCCGGA	1 cut(s)	568
BseBI	CCWGG	3 cut(s)	401, 717, 2078
BseDI	CCNNGG	6 cut(s)	23, 142, 337, 400, 715, 1491
BseGI	GGATG	5 cut(s)	208, 304, 411, 489, 772
BseJI	GATNNNNATC	1 cut(s)	801
BseLI	CCNNNNNNNGG	6 cut(s)	353, 812, 1085, 1779, 2385, 2485
BseMI	GCAATG	2 cut(s)	2287, 2649
BseMII	CTCAG	4 cut(s)	69, 114, 939, 2561
BseRI	GAGGAG	1 cut(s)	1997
BseSI	GKGCMC	2 cut(s)	1158, 1711
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	8 cut(s)	940, 997, 1921, 1936, 2186, 2189, 2674, 2702
BsgI	GTGCAG	1 cut(s)	1068
Bsh1236I	CGCG	2 cut(s)	83, 960
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	8 cut(s)	5, 89, 147, 1471, 2420, 2441, 2489, 2717
BshNI	GGYRCC	3 cut(s)	526, 943, 1155
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	5 cut(s)	893, 1711, 2023, 2478, 2485
BsiHKCI	CYCGRG	1 cut(s)	2484
BsiSI	CCGG	5 cut(s)	6, 23, 86, 296, 569
BsiWI	CGTACG	1 cut(s)	2301
BslFI	GGGAC	5 cut(s)	89, 330, 698, 1473, 1709
BslI	CCNNNNNNNGG	6 cut(s)	353, 812, 1085, 1779, 2385, 2485
BsmAI	GTCTC	5 cut(s)	58, 165, 1383, 1975, 2566
BsmFI	GGGAC	5 cut(s)	89, 330, 698, 1473, 1709
BsnI	GGCC	8 cut(s)	5, 89, 147, 1471, 2420, 2441, 2489, 2717
Bso31I	GGTCTC	2 cut(s)	58, 1383
BsoBI	CYCGRG	1 cut(s)	2484
Bsp119I	TTCGAA	1 cut(s)	2131
Bsp1286I	GDGCHC	8 cut(s)	195, 893, 1158, 1304, 1711, 2023, 2478, 2485
Bsp13I	TCCGGA	1 cut(s)	568
Bsp143I	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
BspANI	GGCC	8 cut(s)	5, 89, 147, 1471, 2420, 2441, 2489, 2717
BspCNI	CTCAG	4 cut(s)	68, 113, 940, 2562
BspEI	TCCGGA	1 cut(s)	568
BspFNI	CGCG	2 cut(s)	83, 960
BspHI	TCATGA	2 cut(s)	994, 2608
BspMAI	CTGCAG	2 cut(s)	1954, 2692
BspMI	ACCTGC	1 cut(s)	344
BspOI	GCTAGC	1 cut(s)	2258
BspQI	GCTCTTC	1 cut(s)	1759
BspT104I	TTCGAA	1 cut(s)	2131
BspT107I	GGYRCC	3 cut(s)	526, 943, 1155
BspTI	CTTAAG	2 cut(s)	1369, 1625
BspTNI	GGTCTC	2 cut(s)	58, 1383
BsrBI	CCGCTC	1 cut(s)	92
BsrDI	GCAATG	2 cut(s)	2287, 2649
BsrFI	RCCGGY	1 cut(s)	85
BssAI	RCCGGY	1 cut(s)	85
BssECI	CCNNGG	6 cut(s)	23, 142, 337, 400, 715, 1491
BssMI	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
BssNI	GRCGYC	2 cut(s)	41, 1421
BssT1I	CCWWGG	2 cut(s)	337, 1491
Bst2UI	CCWGG	3 cut(s)	401, 717, 2078
Bst4CI	ACNGT	4 cut(s)	124, 491, 1046, 1341
Bst6I	CTCTTC	4 cut(s)	155, 646, 1379, 1759
BstACI	GRCGYC	2 cut(s)	41, 1421
BstAFI	CTTAAG	2 cut(s)	1369, 1625
BstAPI	GCANNNNNTGC	1 cut(s)	1934
BstBI	TTCGAA	1 cut(s)	2131
BstC8I	GCNNGC	9 cut(s)	87, 460, 864, 2019, 2046, 2125, 2151, 2256, 2314
BstEII	GGTNACC	1 cut(s)	719
BstF5I	GGATG	5 cut(s)	208, 304, 411, 489, 772
BstFNI	CGCG	2 cut(s)	83, 960
BstHHI	GCGC	2 cut(s)	85, 1822
BstKTI	GATC	9 cut(s)	388, 799, 805, 1679, 2347, 2402, 2524, 2566, 2746
BstMAI	GTCTC	5 cut(s)	58, 165, 1383, 1975, 2566
BstMBI	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	8 cut(s)	89, 680, 928, 1934, 2183, 2417, 2596, 2624
BstNI	CCWGG	3 cut(s)	401, 717, 2078
BstNSI	RCATGY	4 cut(s)	462, 1227, 1463, 2206
BstPAI	GACNNNNGTC	1 cut(s)	1224
BstPI	GGTNACC	1 cut(s)	719
BstSCI	CCNGG	5 cut(s)	5, 22, 399, 715, 2076
BstSFI	CTRYAG	4 cut(s)	854, 1950, 2181, 2688
BstSLI	GKGCMC	2 cut(s)	1158, 1711
BstUI	CGCG	2 cut(s)	83, 960
BstV1I	GCAGC	8 cut(s)	940, 997, 1921, 1936, 2186, 2189, 2674, 2702
BstV2I	GAAGAC	5 cut(s)	282, 2120, 2288, 2671, 2688
BstX2I	RGATCY	5 cut(s)	385, 796, 2344, 2563, 2743
BstYI	RGATCY	5 cut(s)	385, 796, 2344, 2563, 2743
BstZI	CGGCCG	1 cut(s)	87
BsuI	GTATCC	1 cut(s)	1910
BsuRI	GGCC	8 cut(s)	5, 89, 147, 1471, 2420, 2441, 2489, 2717
BtgZI	GCGATG	2 cut(s)	941, 1451
BtsCI	GGATG	5 cut(s)	208, 304, 411, 489, 772
BtsI	GCAGTG	2 cut(s)	42, 1773
BtsIMutI	CAGTG	9 cut(s)	42, 615, 814, 1051, 1337, 1773, 2091, 2173, 2245
BveI	ACCTGC	1 cut(s)	344
Cac8I	GCNNGC	9 cut(s)	87, 460, 864, 2019, 2046, 2125, 2151, 2256, 2314
CaiI	CAGNNNCTG	1 cut(s)	2180
CciI	TCATGA	2 cut(s)	994, 2608
CfoI	GCGC	2 cut(s)	85, 1822
Cfr10I	RCCGGY	1 cut(s)	85
Cfr13I	GGNCC	8 cut(s)	344, 712, 1487, 1575, 2418, 2439, 2487, 2716
CseI	GACGC	3 cut(s)	49, 1410, 2693
Csp6I	GTAC	6 cut(s)	487, 1193, 1284, 1614, 2142, 2302
CviQI	GTAC	6 cut(s)	487, 1193, 1284, 1614, 2142, 2302
DpnI	GATC	9 cut(s)	387, 798, 804, 1678, 2346, 2401, 2523, 2565, 2745
DpnII	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
DraI	TTTAAA	2 cut(s)	903, 1912
EaeI	YGGCCR	2 cut(s)	3, 87
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	4 cut(s)	155, 646, 1379, 1759
EarI	CTCTTC	4 cut(s)	155, 646, 1379, 1759
EciI	GGCGGA	1 cut(s)	2636
Ecl136II	GAGCTC	2 cut(s)	891, 2476
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	337, 1491
Eco147I	AGGCCT	1 cut(s)	1471
Eco24I	GRGCYC	4 cut(s)	195, 893, 1304, 2478
Eco31I	GGTCTC	2 cut(s)	58, 1383
Eco47I	GGWCC	4 cut(s)	344, 712, 1487, 1575
Eco52I	CGGCCG	1 cut(s)	87
Eco53kI	GAGCTC	2 cut(s)	891, 2476
Eco57I	CTGAAG	6 cut(s)	56, 639, 1206, 1403, 1985, 2565
Eco88I	CYCGRG	1 cut(s)	2484
Eco91I	GGTNACC	1 cut(s)	719
EcoICRI	GAGCTC	2 cut(s)	891, 2476
EcoO109I	RGGNCCY	3 cut(s)	712, 2418, 2439
EcoO65I	GGTNACC	1 cut(s)	719
EcoRI	GAATTC	1 cut(s)	728
EcoRII	CCWGG	3 cut(s)	399, 715, 2076
EcoT14I	CCWWGG	2 cut(s)	337, 1491
EcoT22I	ATGCAT	1 cut(s)	1143
EcoT38I	GRGCYC	4 cut(s)	195, 893, 1304, 2478
ErhI	CCWWGG	2 cut(s)	337, 1491
FalI	AAGNNNNNCTT	4 cut(s)	643, 675, 2112, 2144
FaqI	GGGAC	5 cut(s)	89, 330, 698, 1473, 1709
FblI	GTMKAC	1 cut(s)	78
FokI	GGATG	5 cut(s)	215, 311, 418, 496, 759
FriOI	GRGCYC	4 cut(s)	195, 893, 1304, 2478
FspBI	CTAG	8 cut(s)	546, 1281, 1475, 1809, 1901, 2255, 2375, 2669
GlaI	GCGC	2 cut(s)	84, 1821
GsuI	CTGGAG	1 cut(s)	2621
HaeIII	GGCC	8 cut(s)	5, 89, 147, 1471, 2420, 2441, 2489, 2717
HapII	CCGG	5 cut(s)	6, 23, 86, 296, 569
HgaI	GACGC	3 cut(s)	49, 1410, 2693
HhaI	GCGC	2 cut(s)	85, 1822
Hin1I	GRCGYC	2 cut(s)	41, 1421
Hin6I	GCGC	2 cut(s)	83, 1820
HinP1I	GCGC	2 cut(s)	83, 1820
HincII	GTYRAC	1 cut(s)	255
HindII	GTYRAC	1 cut(s)	255
HindIII	AAGCTT	7 cut(s)	756, 1167, 1505, 1886, 2042, 2527, 2577
HinfI	GANTC	9 cut(s)	333, 542, 595, 1649, 1983, 2073, 2452, 2546, 2725
HpaI	GTTAAC	1 cut(s)	255
HpaII	CCGG	5 cut(s)	6, 23, 86, 296, 569
HphI	GGTGA	3 cut(s)	389, 731, 1019
Hpy166II	GTNNAC	5 cut(s)	79, 255, 964, 1027, 1709
Hpy188I	TCNGA	8 cut(s)	1267, 1383, 1579, 1864, 2521, 2551, 2571, 2584
Hpy188III	TCNNGA	9 cut(s)	347, 362, 569, 800, 995, 1680, 1844, 1980, 2609
Hpy8I	GTNNAC	5 cut(s)	79, 255, 964, 1027, 1709
Hpy99I	CGWCG	1 cut(s)	420
HpyAV	CCTTC	4 cut(s)	118, 1052, 2138, 2500
HpyCH4III	ACNGT	4 cut(s)	124, 491, 1046, 1341
HpyF10VI	GCNNNNNNNGC	8 cut(s)	89, 680, 928, 1934, 2183, 2417, 2596, 2624
Hsp92I	GRCGYC	2 cut(s)	41, 1421
HspAI	GCGC	2 cut(s)	83, 1820
Kpn2I	TCCGGA	1 cut(s)	568
KroI	GCCGGC	1 cut(s)	85
KroNI	GCCGGC	1 cut(s)	87
KspAI	GTTAAC	1 cut(s)	255
Kzo9I	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
LguI	GCTCTTC	1 cut(s)	1759
LmnI	GCTCC	5 cut(s)	859, 888, 2010, 2473, 2481
Lsp1109I	GCAGC	8 cut(s)	940, 997, 1921, 1936, 2186, 2189, 2674, 2702
LweI	GCATC	6 cut(s)	859, 1091, 1128, 1739, 2090, 2366
MaeI	CTAG	8 cut(s)	546, 1281, 1475, 1809, 1901, 2255, 2375, 2669
MaeIII	GTNAC	9 cut(s)	37, 395, 613, 719, 974, 1662, 1989, 2089, 2207
MalI	GATC	9 cut(s)	387, 798, 804, 1678, 2346, 2401, 2523, 2565, 2745
MbiI	CCGCTC	1 cut(s)	92
MboI	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
MfeI	CAATTG	3 cut(s)	218, 1556, 2594
MflI	RGATCY	5 cut(s)	385, 796, 2344, 2563, 2743
MhlI	GDGCHC	8 cut(s)	195, 893, 1158, 1304, 1711, 2023, 2478, 2485
MlyI	GAGTC	1 cut(s)	2082
MmeI	TCCRAC	2 cut(s)	670, 1918
Mph1103I	ATGCAT	1 cut(s)	1143
MroI	TCCGGA	1 cut(s)	568
MroNI	GCCGGC	1 cut(s)	85
MroXI	GAANNNNTTC	1 cut(s)	655
MslI	CAYNNNNRTG	4 cut(s)	537, 669, 2016, 2096
MspA1I	CMGCKG	1 cut(s)	2180
MspCI	CTTAAG	2 cut(s)	1369, 1625
MspI	CCGG	5 cut(s)	6, 23, 86, 296, 569
MspR9I	CCNGG	5 cut(s)	7, 24, 401, 717, 2078
MunI	CAATTG	3 cut(s)	218, 1556, 2594
MvaI	CCWGG	3 cut(s)	401, 717, 2078
MvnI	CGCG	2 cut(s)	83, 960
MwoI	GCNNNNNNNGC	8 cut(s)	89, 680, 928, 1934, 2183, 2417, 2596, 2624
NaeI	GCCGGC	1 cut(s)	87
NciI	CCSGG	2 cut(s)	7, 24
NdeII	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
NgoMIV	GCCGGC	1 cut(s)	85
NheI	GCTAGC	1 cut(s)	2254
NmeAIII	GCCGAG	2 cut(s)	123, 2404
NmuCI	GTSAC	6 cut(s)	37, 395, 613, 719, 1662, 2089
NsiI	ATGCAT	1 cut(s)	1143
NspI	RCATGY	4 cut(s)	462, 1227, 1463, 2206
NspV	TTCGAA	1 cut(s)	2131
OliI	CACNNNNGTG	1 cut(s)	2096
PaeI	GCATGC	1 cut(s)	462
PagI	TCATGA	2 cut(s)	994, 2608
PaqCI	CACCTGC	1 cut(s)	344
PceI	AGGCCT	1 cut(s)	1471
PciI	ACATGT	1 cut(s)	1223
PciSI	GCTCTTC	1 cut(s)	1759
PcsI	WCGNNNNNNNCGW	1 cut(s)	2137
PdiI	GCCGGC	1 cut(s)	87
PdmI	GAANNNNTTC	1 cut(s)	655
PfeI	GAWTC	8 cut(s)	333, 542, 595, 1649, 1983, 2452, 2546, 2725
Pfl23II	CGTACG	1 cut(s)	2301
PflFI	GACNNNGTC	1 cut(s)	374
PflMI	CCANNNNNTGG	1 cut(s)	1779
PleI	GAGTC	1 cut(s)	2081
PpsI	GAGTC	1 cut(s)	2081
PpuMI	RGGWCCY	1 cut(s)	712
PscI	ACATGT	1 cut(s)	1223
PshAI	GACNNNNGTC	1 cut(s)	1224
PshBI	ATTAAT	1 cut(s)	1524
Psp124BI	GAGCTC	2 cut(s)	893, 2478
Psp5II	RGGWCCY	1 cut(s)	712
Psp6I	CCWGG	3 cut(s)	399, 715, 2076
PspEI	GGTNACC	1 cut(s)	719
PspGI	CCWGG	3 cut(s)	399, 715, 2076
PspLI	CGTACG	1 cut(s)	2301
PspPI	GGNCC	8 cut(s)	344, 712, 1487, 1575, 2418, 2439, 2487, 2716
PspPPI	RGGWCCY	1 cut(s)	712
PstI	CTGCAG	2 cut(s)	1954, 2692
PstNI	CAGNNNCTG	1 cut(s)	2180
PsuI	RGATCY	5 cut(s)	385, 796, 2344, 2563, 2743
PsyI	GACNNNGTC	1 cut(s)	374
PvuII	CAGCTG	1 cut(s)	2180
RsaI	GTAC	6 cut(s)	488, 1194, 1285, 1615, 2143, 2303
RsaNI	GTAC	6 cut(s)	487, 1193, 1284, 1614, 2142, 2302
RseI	CAYNNNNRTG	4 cut(s)	537, 669, 2016, 2096
SacI	GAGCTC	2 cut(s)	893, 2478
SapI	GCTCTTC	1 cut(s)	1759
Sau3AI	GATC	9 cut(s)	385, 796, 802, 1676, 2344, 2399, 2521, 2563, 2743
Sau96I	GGNCC	8 cut(s)	344, 712, 1487, 1575, 2418, 2439, 2487, 2716
ScaI	AGTACT	1 cut(s)	1615
SchI	GAGTC	1 cut(s)	2082
ScrFI	CCNGG	5 cut(s)	7, 24, 401, 717, 2078
SduI	GDGCHC	8 cut(s)	195, 893, 1158, 1304, 1711, 2023, 2478, 2485
SfaNI	GCATC	6 cut(s)	859, 1091, 1128, 1739, 2090, 2366
SfcI	CTRYAG	4 cut(s)	854, 1950, 2181, 2688
SfuI	TTCGAA	1 cut(s)	2131
SinI	GGWCC	4 cut(s)	344, 712, 1487, 1575
SmiMI	CAYNNNNRTG	4 cut(s)	537, 669, 2016, 2096
SmlI	CTYRAG	5 cut(s)	505, 1369, 1625, 2422, 2720
SmoI	CTYRAG	5 cut(s)	505, 1369, 1625, 2422, 2720
SphI	GCATGC	1 cut(s)	462
SseBI	AGGCCT	1 cut(s)	1471
SspMI	CTAG	8 cut(s)	546, 1281, 1475, 1809, 1901, 2255, 2375, 2669
SstI	GAGCTC	2 cut(s)	893, 2478
StuI	AGGCCT	1 cut(s)	1471
StyD4I	CCNGG	5 cut(s)	5, 22, 399, 715, 2076
StyI	CCWWGG	2 cut(s)	337, 1491
TaaI	ACNGT	4 cut(s)	124, 491, 1046, 1341
TaqI	TCGA	2 cut(s)	627, 2131
TatI	WGTACW	4 cut(s)	486, 1192, 1283, 1613
TauI	GCSGC	5 cut(s)	92, 744, 1247, 2156, 2621
TfiI	GAWTC	8 cut(s)	333, 542, 595, 1649, 1983, 2452, 2546, 2725
TscAI	CASTG	9 cut(s)	42, 622, 814, 1051, 1344, 1780, 2098, 2173, 2245
TseFI	GTSAC	6 cut(s)	37, 395, 613, 719, 1662, 2089
TseI	GCWGC	8 cut(s)	928, 1010, 1934, 1949, 2174, 2177, 2687, 2690
Tsp45I	GTSAC	6 cut(s)	37, 395, 613, 719, 1662, 2089
TspGWI	ACGGA	5 cut(s)	507, 2132, 2289, 2468, 2524
TspRI	CASTG	9 cut(s)	42, 622, 814, 1051, 1344, 1780, 2098, 2173, 2245
Tth111I	GACNNNGTC	1 cut(s)	374
Van91I	CCANNNNNTGG	1 cut(s)	1779
Vha464I	CTTAAG	2 cut(s)	1369, 1625
VneI	GTGCAC	1 cut(s)	1707
VpaK11BI	GGWCC	4 cut(s)	344, 712, 1487, 1575
VspI	ATTAAT	1 cut(s)	1524
XapI	RAATTY	4 cut(s)	728, 1396, 1445, 2213
XceI	RCATGY	4 cut(s)	462, 1227, 1463, 2206
XcmI	CCANNNNNNNNNTGG	2 cut(s)	277, 686
XmiI	GTMKAC	1 cut(s)	78
XmnI	GAANNNNTTC	1 cut(s)	655
XspI	CTAG	8 cut(s)	546, 1281, 1475, 1809, 1901, 2255, 2375, 2669
ZrmI	AGTACT	1 cut(s)	1615
Zsp2I	ATGCAT	1 cut(s)	1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.