BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05320 AT1G05320 AT1G05320 AT1G05320 AT1G05320 AT1G05320 AT1G05320 AT1G05320 AT1G05320 |
| fragaria_vesca | FvH4_6g39571 FvH4_6g39571 FvH4_6g39571 FvH4_6g39571 |
| malus_domestica | MD09G1138500.v1.1 MD17G1128600.v1.1 |
| prunus_persica | Prupe.3G186800_v2.0.a1 Prupe.3G186800_v2.0.a1 Prupe.3G186800_v2.0.a1 |
| pyrus_communis | pycom09g05930 pycom09g05950 pycom17g12070 |
| rosa_chinensis | RchiOBHm_Chr2g0153621 |
| rosa_laevigata | RLG00000020715 |
| rosa_multiflora | Rmu_sc0005776.1_g000004 Rmu_ssc0000024.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00094860 |
| rosa_rugosa | Rorug02G0420900 Rorug02G0441000 |
| rosa_samantha | Rh2AG504000 Rh2BG514700 Rh2CG489700 Rh2DG526500 Rh3AG044900 Rh3BG047200 Rh3CG045700 Rh3DG046100 |
| rosa_wichuraiana | Rw2G041390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 959 |
| Acc16I | TGCGCA | 1 cut(s) | 3714 |
| Acc36I | ACCTGC | 1 cut(s) | 2533 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 919 |
| AccBSI | CCGCTC | 1 cut(s) | 1028 |
| AccI | GTMKAC | 1 cut(s) | 1049 |
| AccII | CGCG | 2 cut(s) | 1522, 2880 |
| AciI | CCGC | 5 cut(s) | 1026, 1883, 2099, 2878, 2885 |
| AclWI | GGATC | 5 cut(s) | 555, 3645, 3765, 3949, 4018 |
| AcoI | YGGCCR | 2 cut(s) | 1653, 2100 |
| AcsI | RAATTY | 5 cut(s) | 361, 1312, 1756, 2485, 3217 |
| AfaI | GTAC | 6 cut(s) | 1179, 1254, 1645, 1703, 1825, 2626 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 37, 295, 919, 991, 2421, 2422, 2884 |
| AflII | CTTAAG | 1 cut(s) | 2282 |
| AgeI | ACCGGT | 1 cut(s) | 103 |
| AjnI | CCWGG | 3 cut(s) | 1704, 2442, 3003 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1299, 1331 |
| Alw21I | GWGCWC | 3 cut(s) | 23, 2816, 3441 |
| Alw26I | GTCTC | 8 cut(s) | 509, 584, 701, 1344, 1511, 3050, 3239, 3525 |
| AlwI | GGATC | 5 cut(s) | 555, 3645, 3765, 3949, 4018 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 622, 3029, 3599 |
| Ama87I | CYCGRG | 4 cut(s) | 288, 2051, 2973, 4115 |
| ApoI | RAATTY | 5 cut(s) | 361, 1312, 1756, 2485, 3217 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1252, 1284 |
| AsiGI | ACCGGT | 1 cut(s) | 103 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2913, 3258 |
| AspLEI | GCGC | 3 cut(s) | 1124, 1524, 3715 |
| AspS9I | GGNCC | 5 cut(s) | 717, 982, 1813, 1818, 2847 |
| AsuC2I | CCSGG | 3 cut(s) | 289, 290, 1817 |
| AsuHPI | GGTGA | 7 cut(s) | 310, 571, 662, 1915, 2536, 3559, 3908 |
| AsuNHI | GCTAGC | 1 cut(s) | 3868 |
| AvaI | CYCGRG | 4 cut(s) | 288, 2051, 2973, 4115 |
| BanII | GRGCYC | 1 cut(s) | 23 |
| BauI | CACGAG | 1 cut(s) | 1157 |
| Bbv12I | GWGCWC | 3 cut(s) | 23, 2816, 3441 |
| BbvCI | CCTCAGC | 4 cut(s) | 477, 828, 3147, 4041 |
| BccI | CCATC | 9 cut(s) | 143, 188, 244, 569, 763, 775, 1839, 3967, 4106 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4096, 4130 |
| BciT130I | CCWGG | 3 cut(s) | 1706, 2444, 3005 |
| BciVI | GTATCC | 1 cut(s) | 1882 |
| BcnI | CCSGG | 3 cut(s) | 289, 290, 1817 |
| BcoDI | GTCTC | 8 cut(s) | 509, 584, 701, 1344, 1511, 3050, 3239, 3525 |
| BfaI | CTAG | 9 cut(s) | 182, 2076, 2417, 2966, 3143, 3830, 3869, 3930, 4129 |
| BfmI | CTRYAG | 5 cut(s) | 635, 1106, 2145, 2744, 3279 |
| BfoI | RGCGCY | 1 cut(s) | 1125 |
| BfrI | CTTAAG | 1 cut(s) | 2282 |
| BfuAI | ACCTGC | 1 cut(s) | 2533 |
| BfuI | GTATCC | 1 cut(s) | 1882 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 653 |
| BglII | AGATCT | 3 cut(s) | 1060, 1237, 2649 |
| BlpI | GCTNAGC | 2 cut(s) | 870, 3045 |
| BmcAI | AGTACT | 2 cut(s) | 1645, 2626 |
| Bme1390I | CCNGG | 6 cut(s) | 289, 290, 1706, 1817, 2444, 3005 |
| BmeT110I | CYCGRG | 4 cut(s) | 288, 2051, 2973, 4115 |
| BmgT120I | GGNCC | 5 cut(s) | 717, 982, 1813, 1818, 2847 |
| BmrFI | CCNGG | 6 cut(s) | 289, 290, 1706, 1817, 2444, 3005 |
| BmrI | ACTGGG | 1 cut(s) | 26 |
| BmtI | GCTAGC | 1 cut(s) | 3872 |
| BmuI | ACTGGG | 1 cut(s) | 26 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 239, 271 |
| BpmI | CTGGAG | 6 cut(s) | 644, 1934, 2366, 2426, 3101, 3383 |
| Bpu10I | CCTNAGC | 5 cut(s) | 477, 528, 828, 3147, 4041 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 870, 3045 |
| BpuMI | CCSGG | 3 cut(s) | 289, 290, 1817 |
| BsaI | GGTCTC | 1 cut(s) | 584 |
| BsaJI | CCNNGG | 9 cut(s) | 288, 720, 913, 945, 1125, 1656, 2334, 2478, 3003 |
| BsaWI | WCCGGW | 1 cut(s) | 103 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 4071, 4101 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 37, 295, 919, 991, 2421, 2422, 2884 |
| Bse118I | RCCGGY | 2 cut(s) | 103, 647 |
| BseBI | CCWGG | 3 cut(s) | 1706, 2444, 3005 |
| BseDI | CCNNGG | 9 cut(s) | 288, 720, 913, 945, 1125, 1656, 2334, 2478, 3003 |
| BseGI | GGATG | 8 cut(s) | 55, 199, 838, 1999, 2176, 2378, 2479, 3355 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 37, 295, 919, 991, 2421, 2422, 2884 |
| BseRI | GAGGAG | 3 cut(s) | 494, 683, 2351 |
| BseYI | CCCAGC | 1 cut(s) | 3414 |
| BsgI | GTGCAG | 4 cut(s) | 659, 1128, 1294, 1620 |
| Bsh1236I | CGCG | 2 cut(s) | 1522, 2880 |
| BshTI | ACCGGT | 1 cut(s) | 103 |
| BsiHKAI | GWGCWC | 3 cut(s) | 23, 2816, 3441 |
| BsiHKCI | CYCGRG | 4 cut(s) | 288, 2051, 2973, 4115 |
| BsiSI | CCGG | 5 cut(s) | 104, 289, 648, 1816, 3912 |
| BslFI | GGGAC | 4 cut(s) | 107, 895, 2665, 3947 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 37, 295, 919, 991, 2421, 2422, 2884 |
| BsmAI | GTCTC | 8 cut(s) | 509, 584, 701, 1344, 1511, 3050, 3239, 3525 |
| BsmBI | CGTCTC | 2 cut(s) | 509, 1511 |
| BsmFI | GGGAC | 4 cut(s) | 107, 895, 2665, 3947 |
| BsmI | GAATGC | 3 cut(s) | 1552, 2057, 3784 |
| Bso31I | GGTCTC | 1 cut(s) | 584 |
| BsoBI | CYCGRG | 4 cut(s) | 288, 2051, 2973, 4115 |
| Bsp1286I | GDGCHC | 3 cut(s) | 23, 2816, 3441 |
| Bsp1407I | TGTACA | 2 cut(s) | 1177, 1252 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 870, 3045 |
| BspACI | CCGC | 5 cut(s) | 1026, 1883, 2099, 2878, 2885 |
| BspFNI | CGCG | 2 cut(s) | 1522, 2880 |
| BspMAI | CTGCAG | 2 cut(s) | 639, 1110 |
| BspMI | ACCTGC | 1 cut(s) | 2533 |
| BspOI | GCTAGC | 1 cut(s) | 3872 |
| BspPI | GGATC | 5 cut(s) | 555, 3645, 3765, 3949, 4018 |
| BspQI | GCTCTTC | 4 cut(s) | 423, 885, 2532, 3531 |
| BspTI | CTTAAG | 1 cut(s) | 2282 |
| BspTNI | GGTCTC | 1 cut(s) | 584 |
| BsrBI | CCGCTC | 1 cut(s) | 1028 |
| BsrFI | RCCGGY | 2 cut(s) | 103, 647 |
| BsrGI | TGTACA | 2 cut(s) | 1177, 1252 |
| BssAI | RCCGGY | 2 cut(s) | 103, 647 |
| BssECI | CCNNGG | 9 cut(s) | 288, 720, 913, 945, 1125, 1656, 2334, 2478, 3003 |
| BssSI | CACGAG | 1 cut(s) | 1157 |
| BssT1I | CCWWGG | 4 cut(s) | 720, 913, 945, 1125 |
| Bst2BI | CACGAG | 1 cut(s) | 1157 |
| Bst2UI | CCWGG | 3 cut(s) | 1706, 2444, 3005 |
| Bst4CI | ACNGT | 5 cut(s) | 491, 2700, 2818, 3250, 3724 |
| BstAFI | CTTAAG | 1 cut(s) | 2282 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 634, 3862, 3998 |
| BstAUI | TGTACA | 2 cut(s) | 1177, 1252 |
| BstC8I | GCNNGC | 9 cut(s) | 525, 787, 897, 1721, 2097, 2878, 3362, 3717, 3870 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 989 |
| BstF5I | GGATG | 8 cut(s) | 55, 199, 838, 1999, 2176, 2378, 2479, 3355 |
| BstFNI | CGCG | 2 cut(s) | 1522, 2880 |
| BstH2I | RGCGCY | 1 cut(s) | 1125 |
| BstHHI | GCGC | 3 cut(s) | 1124, 1524, 3715 |
| BstMAI | GTCTC | 8 cut(s) | 509, 584, 701, 1344, 1511, 3050, 3239, 3525 |
| BstNI | CCWGG | 3 cut(s) | 1706, 2444, 3005 |
| BstNSI | RCATGY | 1 cut(s) | 698 |
| BstSCI | CCNGG | 6 cut(s) | 287, 288, 1704, 1815, 2442, 3003 |
| BstSFI | CTRYAG | 5 cut(s) | 635, 1106, 2145, 2744, 3279 |
| BstUI | CGCG | 2 cut(s) | 1522, 2880 |
| BstX2I | RGATCY | 6 cut(s) | 547, 1060, 1237, 2649, 3757, 4023 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1132 |
| BstYI | RGATCY | 6 cut(s) | 547, 1060, 1237, 2649, 3757, 4023 |
| BsuI | GTATCC | 1 cut(s) | 1882 |
| BtsCI | GGATG | 8 cut(s) | 55, 199, 838, 1999, 2176, 2378, 2479, 3355 |
| BtsI | GCAGTG | 2 cut(s) | 1282, 2090 |
| BtsIMutI | CAGTG | 7 cut(s) | 39, 1242, 1282, 1649, 2090, 2194, 3720 |
| BveI | ACCTGC | 1 cut(s) | 2533 |
| Cac8I | GCNNGC | 9 cut(s) | 525, 787, 897, 1721, 2097, 2878, 3362, 3717, 3870 |
| CaiI | CAGNNNCTG | 3 cut(s) | 622, 3029, 3599 |
| CfoI | GCGC | 3 cut(s) | 1124, 1524, 3715 |
| Cfr10I | RCCGGY | 2 cut(s) | 103, 647 |
| Cfr13I | GGNCC | 5 cut(s) | 717, 982, 1813, 1818, 2847 |
| Cfr9I | CCCGGG | 1 cut(s) | 288 |
| CseI | GACGC | 3 cut(s) | 1035, 1528, 2559 |
| Csp6I | GTAC | 6 cut(s) | 1178, 1253, 1644, 1702, 1824, 2625 |
| CspAI | ACCGGT | 1 cut(s) | 103 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 667, 702 |
| CviAII | CATG | 6 cut(s) | 113, 203, 695, 1808, 2408, 3656 |
| CviQI | GTAC | 6 cut(s) | 1178, 1253, 1644, 1702, 1824, 2625 |
| EaeI | YGGCCR | 2 cut(s) | 1653, 2100 |
| Ecl136II | GAGCTC | 1 cut(s) | 21 |
| Eco130I | CCWWGG | 4 cut(s) | 720, 913, 945, 1125 |
| Eco147I | AGGCCT | 1 cut(s) | 995 |
| Eco24I | GRGCYC | 1 cut(s) | 23 |
| Eco31I | GGTCTC | 1 cut(s) | 584 |
| Eco32I | GATATC | 3 cut(s) | 2031, 3336, 3411 |
| Eco53kI | GAGCTC | 1 cut(s) | 21 |
| Eco88I | CYCGRG | 4 cut(s) | 288, 2051, 2973, 4115 |
| EcoICRI | GAGCTC | 1 cut(s) | 21 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 989 |
| EcoO109I | RGGNCCY | 2 cut(s) | 717, 2847 |
| EcoRI | GAATTC | 2 cut(s) | 361, 1756 |
| EcoRII | CCWGG | 3 cut(s) | 1704, 2442, 3003 |
| EcoRV | GATATC | 3 cut(s) | 2031, 3336, 3411 |
| EcoT14I | CCWWGG | 4 cut(s) | 720, 913, 945, 1125 |
| EcoT22I | ATGCAT | 1 cut(s) | 2176 |
| EcoT38I | GRGCYC | 1 cut(s) | 23 |
| ErhI | CCWWGG | 4 cut(s) | 720, 913, 945, 1125 |
| Esp3I | CGTCTC | 2 cut(s) | 509, 1511 |
| FaeI | CATG | 6 cut(s) | 116, 206, 698, 1811, 2411, 3659 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 704, 736, 879, 911, 1047, 1079, 2940, 2972 |
| FaqI | GGGAC | 4 cut(s) | 107, 895, 2665, 3947 |
| FatI | CATG | 6 cut(s) | 112, 202, 694, 1807, 2407, 3655 |
| FauI | CCCGC | 1 cut(s) | 2885 |
| FblI | GTMKAC | 1 cut(s) | 1049 |
| FokI | GGATG | 8 cut(s) | 62, 206, 845, 2006, 2183, 2365, 2486, 3362 |
| FriOI | GRGCYC | 1 cut(s) | 23 |
| FspBI | CTAG | 9 cut(s) | 182, 2076, 2417, 2966, 3143, 3830, 3869, 3930, 4129 |
| FspI | TGCGCA | 1 cut(s) | 3714 |
| GlaI | GCGC | 3 cut(s) | 1123, 1523, 3714 |
| GsaI | CCCAGC | 1 cut(s) | 3418 |
| GsuI | CTGGAG | 6 cut(s) | 644, 1934, 2366, 2426, 3101, 3383 |
| HaeII | RGCGCY | 1 cut(s) | 1125 |
| HapII | CCGG | 5 cut(s) | 104, 289, 648, 1816, 3912 |
| HgaI | GACGC | 3 cut(s) | 1035, 1528, 2559 |
| HhaI | GCGC | 3 cut(s) | 1124, 1524, 3715 |
| Hin1II | CATG | 6 cut(s) | 116, 206, 698, 1811, 2411, 3659 |
| Hin6I | GCGC | 3 cut(s) | 1122, 1522, 3713 |
| HinP1I | GCGC | 3 cut(s) | 1122, 1522, 3713 |
| HincII | GTYRAC | 4 cut(s) | 1050, 2124, 2707, 3621 |
| HindII | GTYRAC | 4 cut(s) | 1050, 2124, 2707, 3621 |
| HindIII | AAGCTT | 6 cut(s) | 1298, 1344, 1840, 2195, 2458, 2670 |
| HpaI | GTTAAC | 1 cut(s) | 2124 |
| HpaII | CCGG | 5 cut(s) | 104, 289, 648, 1816, 3912 |
| HphI | GGTGA | 7 cut(s) | 310, 571, 662, 1915, 2536, 3559, 3908 |
| Hpy166II | GTNNAC | 8 cut(s) | 494, 692, 1050, 1826, 2124, 2645, 2707, 3621 |
| Hpy8I | GTNNAC | 8 cut(s) | 494, 692, 1050, 1826, 2124, 2645, 2707, 3621 |
| Hpy99I | CGWCG | 1 cut(s) | 1051 |
| HpyCH4III | ACNGT | 5 cut(s) | 491, 2700, 2818, 3250, 3724 |
| HpyCH4IV | ACGT | 1 cut(s) | 518 |
| HpySE526I | ACGT | 1 cut(s) | 518 |
| Hsp92II | CATG | 6 cut(s) | 116, 206, 698, 1811, 2411, 3659 |
| HspAI | GCGC | 3 cut(s) | 1122, 1522, 3713 |
| KspAI | GTTAAC | 1 cut(s) | 2124 |
| LguI | GCTCTTC | 4 cut(s) | 423, 885, 2532, 3531 |
| LmnI | GCTCC | 9 cut(s) | 625, 670, 928, 1412, 2338, 2347, 3295, 3436, 3529 |
| MaeI | CTAG | 9 cut(s) | 182, 2076, 2417, 2966, 3143, 3830, 3869, 3930, 4129 |
| MaeII | ACGT | 1 cut(s) | 518 |
| MaeIII | GTNAC | 4 cut(s) | 302, 1198, 1920, 2852 |
| MbiI | CCGCTC | 1 cut(s) | 1028 |
| MfeI | CAATTG | 1 cut(s) | 3542 |
| MflI | RGATCY | 6 cut(s) | 547, 1060, 1237, 2649, 3757, 4023 |
| MhlI | GDGCHC | 3 cut(s) | 23, 2816, 3441 |
| MlyI | GAGTC | 3 cut(s) | 1175, 3052, 3197 |
| MmeI | TCCRAC | 2 cut(s) | 1888, 2046 |
| Mph1103I | ATGCAT | 1 cut(s) | 2176 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2913, 3258 |
| MspA1I | CMGCKG | 6 cut(s) | 1229, 1258, 1681, 1723, 2722, 3596 |
| MspCI | CTTAAG | 1 cut(s) | 2282 |
| MspI | CCGG | 5 cut(s) | 104, 289, 648, 1816, 3912 |
| MspR9I | CCNGG | 6 cut(s) | 289, 290, 1706, 1817, 2444, 3005 |
| MunI | CAATTG | 1 cut(s) | 3542 |
| Mva1269I | GAATGC | 3 cut(s) | 1552, 2057, 3784 |
| MvaI | CCWGG | 3 cut(s) | 1706, 2444, 3005 |
| MvnI | CGCG | 2 cut(s) | 1522, 2880 |
| NciI | CCSGG | 3 cut(s) | 289, 290, 1817 |
| NheI | GCTAGC | 1 cut(s) | 3868 |
| NlaIII | CATG | 6 cut(s) | 116, 206, 698, 1811, 2411, 3659 |
| NmeAIII | GCCGAG | 3 cut(s) | 1681, 2359, 2503 |
| NmuCI | GTSAC | 2 cut(s) | 302, 2852 |
| NsbI | TGCGCA | 1 cut(s) | 3714 |
| NsiI | ATGCAT | 1 cut(s) | 2176 |
| NspI | RCATGY | 1 cut(s) | 698 |
| PaeR7I | CTCGAG | 2 cut(s) | 2051, 2973 |
| PceI | AGGCCT | 1 cut(s) | 995 |
| PciSI | GCTCTTC | 4 cut(s) | 423, 885, 2532, 3531 |
| PctI | GAATGC | 3 cut(s) | 1552, 2057, 3784 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2913, 3258 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 919 |
| PfoI | TCCNGGA | 1 cut(s) | 2442 |
| PinAI | ACCGGT | 1 cut(s) | 103 |
| PleI | GAGTC | 3 cut(s) | 1174, 3052, 3196 |
| PpsI | GAGTC | 3 cut(s) | 1174, 3052, 3196 |
| PsiI | TTATAA | 1 cut(s) | 959 |
| Psp124BI | GAGCTC | 1 cut(s) | 23 |
| Psp6I | CCWGG | 3 cut(s) | 1704, 2442, 3003 |
| PspFI | CCCAGC | 1 cut(s) | 3414 |
| PspGI | CCWGG | 3 cut(s) | 1704, 2442, 3003 |
| PspPI | GGNCC | 5 cut(s) | 717, 982, 1813, 1818, 2847 |
| PspXI | VCTCGAGB | 1 cut(s) | 2051 |
| PstI | CTGCAG | 2 cut(s) | 639, 1110 |
| PstNI | CAGNNNCTG | 3 cut(s) | 622, 3029, 3599 |
| PsuI | RGATCY | 6 cut(s) | 547, 1060, 1237, 2649, 3757, 4023 |
| PvuII | CAGCTG | 6 cut(s) | 1229, 1258, 1681, 1723, 2722, 3596 |
| RsaI | GTAC | 6 cut(s) | 1179, 1254, 1645, 1703, 1825, 2626 |
| RsaNI | GTAC | 6 cut(s) | 1178, 1253, 1644, 1702, 1824, 2625 |
| SacI | GAGCTC | 1 cut(s) | 23 |
| SalI | GTCGAC | 1 cut(s) | 1048 |
| SapI | GCTCTTC | 4 cut(s) | 423, 885, 2532, 3531 |
| Sau96I | GGNCC | 5 cut(s) | 717, 982, 1813, 1818, 2847 |
| ScaI | AGTACT | 2 cut(s) | 1645, 2626 |
| SchI | GAGTC | 3 cut(s) | 1175, 3052, 3197 |
| ScrFI | CCNGG | 6 cut(s) | 289, 290, 1706, 1817, 2444, 3005 |
| SduI | GDGCHC | 3 cut(s) | 23, 2816, 3441 |
| SfcI | CTRYAG | 5 cut(s) | 635, 1106, 2145, 2744, 3279 |
| Sfr274I | CTCGAG | 2 cut(s) | 2051, 2973 |
| SlaI | CTCGAG | 2 cut(s) | 2051, 2973 |
| SmaI | CCCGGG | 1 cut(s) | 290 |
| SseBI | AGGCCT | 1 cut(s) | 995 |
| SsiI | CCGC | 5 cut(s) | 1026, 1883, 2099, 2878, 2885 |
| SspI | AATATT | 1 cut(s) | 3385 |
| SspMI | CTAG | 9 cut(s) | 182, 2076, 2417, 2966, 3143, 3830, 3869, 3930, 4129 |
| SstI | GAGCTC | 1 cut(s) | 23 |
| StuI | AGGCCT | 1 cut(s) | 995 |
| StyD4I | CCNGG | 6 cut(s) | 287, 288, 1704, 1815, 2442, 3003 |
| StyI | CCWWGG | 4 cut(s) | 720, 913, 945, 1125 |
| TaaI | ACNGT | 5 cut(s) | 491, 2700, 2818, 3250, 3724 |
| TaiI | ACGT | 1 cut(s) | 521 |
| TaqI | TCGA | 5 cut(s) | 86, 1049, 2052, 2974, 3420 |
| TatI | WGTACW | 5 cut(s) | 1177, 1252, 1643, 1823, 2624 |
| TauI | GCSGC | 1 cut(s) | 2102 |
| TscAI | CASTG | 7 cut(s) | 39, 1249, 1282, 1656, 2097, 2194, 3727 |
| TseFI | GTSAC | 2 cut(s) | 302, 2852 |
| Tsp45I | GTSAC | 2 cut(s) | 302, 2852 |
| TspGWI | ACGGA | 1 cut(s) | 3308 |
| TspMI | CCCGGG | 1 cut(s) | 288 |
| TspRI | CASTG | 7 cut(s) | 39, 1249, 1282, 1656, 2097, 2194, 3727 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 919 |
| Vha464I | CTTAAG | 1 cut(s) | 2282 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 989 |
| XapI | RAATTY | 5 cut(s) | 361, 1312, 1756, 2485, 3217 |
| XbaI | TCTAGA | 1 cut(s) | 3829 |
| XceI | RCATGY | 1 cut(s) | 698 |
| XhoI | CTCGAG | 2 cut(s) | 2051, 2973 |
| XmaI | CCCGGG | 1 cut(s) | 288 |
| XmiI | GTMKAC | 1 cut(s) | 1049 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2913, 3258 |
| XspI | CTAG | 9 cut(s) | 182, 2076, 2417, 2966, 3143, 3830, 3869, 3930, 4129 |
| ZrmI | AGTACT | 2 cut(s) | 1645, 2626 |
| Zsp2I | ATGCAT | 1 cut(s) | 2176 |