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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48310 AT5G48310 |
| fragaria_vesca | FvH4_6g40180 FvH4_6g40180 FvH4_6g40180 FvH4_6g40180 |
| malus_domestica | MD09G1134500.v1.1 MD17G1123400.v1.1 |
| prunus_persica | Prupe.3G192200_v2.0.a1 Prupe.3G192200_v2.0.a1 Prupe.3G192200_v2.0.a1 |
| pyrus_communis | pycom09g05570 |
| rosa_chinensis | RchiOBHm_Chr2g0155201 |
| rosa_laevigata | RLG00000020825 |
| rosa_multiflora | Rmu_sc0004976.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00093880 |
| rosa_rugosa | Rorug02G0445900 |
| rosa_samantha | Rh2AG512200 Rh2BG522900 Rh2CG497200 Rh2DG532600 |
| rosa_wichuraiana | Rw2G042080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 933 |
| Acc16I | TGCGCA | 1 cut(s) | 2189 |
| Acc36I | ACCTGC | 2 cut(s) | 2899, 3150 |
| Acc65I | GGTACC | 1 cut(s) | 2220 |
| AccB1I | GGYRCC | 3 cut(s) | 1027, 2220, 2668 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 536, 2678 |
| AccI | GTMKAC | 5 cut(s) | 795, 985, 2139, 2580, 3285 |
| AciI | CCGC | 2 cut(s) | 1750, 2207 |
| AclWI | GGATC | 5 cut(s) | 47, 58, 778, 2362, 3430 |
| AcoI | YGGCCR | 1 cut(s) | 943 |
| AcsI | RAATTY | 9 cut(s) | 1034, 1149, 1814, 2323, 2349, 2528, 2970, 2994, 3380 |
| AcuI | CTGAAG | 7 cut(s) | 151, 285, 1253, 1431, 1440, 2289, 3008 |
| AcyI | GRCGYC | 1 cut(s) | 1340 |
| AdeI | CACNNNGTG | 1 cut(s) | 533 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 536, 766, 767, 1460, 1510, 2483, 2570, 2678, 3062 |
| AflIII | ACRYGT | 3 cut(s) | 1294, 1870, 2497 |
| AhlI | ACTAGT | 2 cut(s) | 818, 1306 |
| AjnI | CCWGG | 4 cut(s) | 457, 953, 1053, 3038 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 119, 151, 369, 401 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 174, 206, 1540, 1572 |
| Alw21I | GWGCWC | 1 cut(s) | 1241 |
| Alw26I | GTCTC | 6 cut(s) | 338, 869, 1367, 1706, 2234, 2735 |
| AlwI | GGATC | 5 cut(s) | 47, 58, 778, 2362, 3430 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 59, 308, 550, 2105, 2920 |
| Ama87I | CYCGRG | 1 cut(s) | 1101 |
| AoxI | GGCC | 6 cut(s) | 13, 217, 943, 1604, 1944, 2777 |
| ApoI | RAATTY | 9 cut(s) | 1034, 1149, 1814, 2323, 2349, 2528, 2970, 2994, 3380 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1999, 2031, 3440, 3472 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 892 |
| Asp718I | GGTACC | 1 cut(s) | 2220 |
| AspLEI | GCGC | 5 cut(s) | 165, 649, 1452, 2113, 2190 |
| AspS9I | GGNCC | 7 cut(s) | 1700, 1790, 2090, 2486, 2778, 2911, 3247 |
| AsuC2I | CCSGG | 4 cut(s) | 1102, 1103, 1455, 1771 |
| AsuHPI | GGTGA | 5 cut(s) | 497, 608, 857, 1475, 2697 |
| AvaI | CYCGRG | 1 cut(s) | 1101 |
| AvaII | GGWCC | 6 cut(s) | 1700, 1790, 2090, 2486, 2911, 3247 |
| AxyI | CCTNAGG | 1 cut(s) | 1161 |
| BaeGI | GKGCMC | 2 cut(s) | 514, 1756 |
| BalI | TGGCCA | 1 cut(s) | 945 |
| BanI | GGYRCC | 3 cut(s) | 1027, 2220, 2668 |
| BanII | GRGCYC | 2 cut(s) | 562, 3516 |
| BbsI | GAAGAC | 3 cut(s) | 524, 1419, 3030 |
| Bbv12I | GWGCWC | 1 cut(s) | 1241 |
| BbvCI | CCTCAGC | 2 cut(s) | 2715, 3243 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 8, 42, 1032, 1066, 3440, 3474 |
| BciT130I | CCWGG | 4 cut(s) | 459, 955, 1055, 3040 |
| BciVI | GTATCC | 3 cut(s) | 808, 2897, 3550 |
| BclI | TGATCA | 1 cut(s) | 1621 |
| BcnI | CCSGG | 4 cut(s) | 1102, 1103, 1455, 1771 |
| BcoDI | GTCTC | 6 cut(s) | 338, 869, 1367, 1706, 2234, 2735 |
| BcuI | ACTAGT | 2 cut(s) | 818, 1306 |
| BfaI | CTAG | 9 cut(s) | 65, 405, 819, 1307, 1718, 2120, 2168, 3212, 3281 |
| BfmI | CTRYAG | 4 cut(s) | 2067, 2106, 3143, 3570 |
| BfoI | RGCGCY | 1 cut(s) | 2114 |
| BfuAI | ACCTGC | 2 cut(s) | 2899, 3150 |
| BfuI | GTATCC | 3 cut(s) | 808, 2897, 3550 |
| BglII | AGATCT | 1 cut(s) | 3505 |
| BlpI | GCTNAGC | 1 cut(s) | 60 |
| BmcAI | AGTACT | 1 cut(s) | 365 |
| Bme1390I | CCNGG | 8 cut(s) | 459, 955, 1055, 1102, 1103, 1455, 1771, 3040 |
| Bme18I | GGWCC | 6 cut(s) | 1700, 1790, 2090, 2486, 2911, 3247 |
| BmeT110I | CYCGRG | 1 cut(s) | 1101 |
| BmgT120I | GGNCC | 7 cut(s) | 1700, 1790, 2090, 2486, 2778, 2911, 3247 |
| BmiI | GGNNCC | 6 cut(s) | 141, 1029, 2222, 2540, 2670, 2780 |
| BmrFI | CCNGG | 8 cut(s) | 459, 955, 1055, 1102, 1103, 1455, 1771, 3040 |
| BmrI | ACTGGG | 1 cut(s) | 2385 |
| BmsI | GCATC | 4 cut(s) | 1489, 2161, 3565, 3587 |
| BmuI | ACTGGG | 1 cut(s) | 2385 |
| BpiI | GAAGAC | 3 cut(s) | 524, 1419, 3030 |
| BpmI | CTGGAG | 4 cut(s) | 1757, 2082, 2258, 2864 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2715, 3243 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 3 cut(s) | 188, 3139, 3530 |
| BpuMI | CCSGG | 4 cut(s) | 1102, 1103, 1455, 1771 |
| Bsa29I | ATCGAT | 1 cut(s) | 2773 |
| BsaHI | GRCGYC | 1 cut(s) | 1340 |
| BsaI | GGTCTC | 1 cut(s) | 2735 |
| BsaJI | CCNNGG | 9 cut(s) | 1100, 1101, 1102, 1453, 1540, 1793, 2672, 3038, 3039 |
| BsaWI | WCCGGW | 2 cut(s) | 2223, 2563 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3278, 3308 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 536, 766, 767, 1460, 1510, 2483, 2570, 2678, 3062 |
| Bse1I | ACTGG | 6 cut(s) | 939, 1115, 1321, 1703, 2391, 2847 |
| Bse21I | CCTNAGG | 1 cut(s) | 1161 |
| Bse3DI | GCAATG | 4 cut(s) | 742, 1266, 3178, 3493 |
| BseBI | CCWGG | 4 cut(s) | 459, 955, 1055, 3040 |
| BseCI | ATCGAT | 1 cut(s) | 2773 |
| BseDI | CCNNGG | 9 cut(s) | 1100, 1101, 1102, 1453, 1540, 1793, 2672, 3038, 3039 |
| BseGI | GGATG | 3 cut(s) | 487, 1504, 1565 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 536, 766, 767, 1460, 1510, 2483, 2570, 2678, 3062 |
| BseMI | GCAATG | 4 cut(s) | 742, 1266, 3178, 3493 |
| BseMII | CTCAG | 9 cut(s) | 51, 135, 434, 628, 1014, 2427, 2706, 3234, 3260 |
| BseNI | ACTGG | 6 cut(s) | 939, 1115, 1321, 1703, 2391, 2847 |
| BseRI | GAGGAG | 1 cut(s) | 212 |
| BseSI | GKGCMC | 2 cut(s) | 514, 1756 |
| BsgI | GTGCAG | 3 cut(s) | 1003, 1389, 2588 |
| Bsh1285I | CGRYCG | 1 cut(s) | 113 |
| BshFI | GGCC | 6 cut(s) | 15, 219, 945, 1606, 1946, 2779 |
| BshNI | GGYRCC | 3 cut(s) | 1027, 2220, 2668 |
| BshVI | ATCGAT | 1 cut(s) | 2773 |
| BsiEI | CGRYCG | 1 cut(s) | 113 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1241 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1101 |
| BsiSI | CCGG | 5 cut(s) | 1102, 1455, 1771, 2224, 2564 |
| BslFI | GGGAC | 2 cut(s) | 686, 3378 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 536, 766, 767, 1460, 1510, 2483, 2570, 2678, 3062 |
| BsmAI | GTCTC | 6 cut(s) | 338, 869, 1367, 1706, 2234, 2735 |
| BsmFI | GGGAC | 2 cut(s) | 686, 3378 |
| BsmI | GAATGC | 4 cut(s) | 1072, 1144, 1634, 3264 |
| BsnI | GGCC | 6 cut(s) | 15, 219, 945, 1606, 1946, 2779 |
| Bso31I | GGTCTC | 1 cut(s) | 2735 |
| BsoBI | CYCGRG | 1 cut(s) | 1101 |
| Bsp1286I | GDGCHC | 5 cut(s) | 514, 562, 1241, 1756, 3516 |
| Bsp1407I | TGTACA | 3 cut(s) | 1108, 1263, 2131 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 60 |
| Bsp19I | CCATGG | 1 cut(s) | 2672 |
| BspACI | CCGC | 2 cut(s) | 1750, 2207 |
| BspANI | GGCC | 6 cut(s) | 15, 219, 945, 1606, 1946, 2779 |
| BspCNI | CTCAG | 9 cut(s) | 52, 134, 435, 627, 1015, 2428, 2707, 3235, 3261 |
| BspDI | ATCGAT | 1 cut(s) | 2773 |
| BspHI | TCATGA | 2 cut(s) | 1875, 2152 |
| BspLI | GGNNCC | 6 cut(s) | 141, 1029, 2222, 2540, 2670, 2780 |
| BspMAI | CTGCAG | 2 cut(s) | 2110, 3147 |
| BspMI | ACCTGC | 2 cut(s) | 2899, 3150 |
| BspPI | GGATC | 5 cut(s) | 47, 58, 778, 2362, 3430 |
| BspQI | GCTCTTC | 2 cut(s) | 1065, 1229 |
| BspT107I | GGYRCC | 3 cut(s) | 1027, 2220, 2668 |
| BspTNI | GGTCTC | 1 cut(s) | 2735 |
| BsrDI | GCAATG | 4 cut(s) | 742, 1266, 3178, 3493 |
| BsrGI | TGTACA | 3 cut(s) | 1108, 1263, 2131 |
| BsrI | ACTGG | 6 cut(s) | 939, 1115, 1321, 1703, 2391, 2847 |
| BssECI | CCNNGG | 9 cut(s) | 1100, 1101, 1102, 1453, 1540, 1793, 2672, 3038, 3039 |
| BssNAI | GTATAC | 1 cut(s) | 986 |
| BssNI | GRCGYC | 1 cut(s) | 1340 |
| BssT1I | CCWWGG | 3 cut(s) | 1540, 1793, 2672 |
| Bst1107I | GTATAC | 1 cut(s) | 986 |
| Bst2UI | CCWGG | 4 cut(s) | 459, 955, 1055, 3040 |
| Bst4CI | ACNGT | 5 cut(s) | 144, 179, 3112, 3154, 3188 |
| Bst6I | CTCTTC | 6 cut(s) | 336, 372, 1065, 1229, 1356, 2984 |
| BstACI | GRCGYC | 1 cut(s) | 1340 |
| BstAUI | TGTACA | 3 cut(s) | 1108, 1263, 2131 |
| BstC8I | GCNNGC | 9 cut(s) | 217, 538, 903, 907, 1752, 2115, 3147, 3180, 3264 |
| BstDSI | CCRYGG | 1 cut(s) | 2672 |
| BstF5I | GGATG | 3 cut(s) | 487, 1504, 1565 |
| BstH2I | RGCGCY | 1 cut(s) | 2114 |
| BstHHI | GCGC | 5 cut(s) | 165, 649, 1452, 2113, 2190 |
| BstMAI | GTCTC | 6 cut(s) | 338, 869, 1367, 1706, 2234, 2735 |
| BstMCI | CGRYCG | 1 cut(s) | 113 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 977, 1751, 2114, 2465, 2905, 2948, 3575 |
| BstNI | CCWGG | 4 cut(s) | 459, 955, 1055, 3040 |
| BstNSI | RCATGY | 6 cut(s) | 984, 1298, 1874, 2384, 2501, 3266 |
| BstSCI | CCNGG | 8 cut(s) | 457, 953, 1053, 1100, 1101, 1453, 1769, 3038 |
| BstSFI | CTRYAG | 4 cut(s) | 2067, 2106, 3143, 3570 |
| BstSLI | GKGCMC | 2 cut(s) | 514, 1756 |
| BstV2I | GAAGAC | 3 cut(s) | 524, 1419, 3030 |
| BstX2I | RGATCY | 3 cut(s) | 2367, 3422, 3505 |
| BstYI | RGATCY | 3 cut(s) | 2367, 3422, 3505 |
| BstZ17I | GTATAC | 1 cut(s) | 986 |
| Bsu15I | ATCGAT | 1 cut(s) | 2773 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1161 |
| BsuI | GTATCC | 3 cut(s) | 808, 2897, 3550 |
| BsuRI | GGCC | 6 cut(s) | 15, 219, 945, 1606, 1946, 2779 |
| BsuTUI | ATCGAT | 1 cut(s) | 2773 |
| BtgI | CCRYGG | 1 cut(s) | 2672 |
| BtsCI | GGATG | 3 cut(s) | 487, 1504, 1565 |
| BveI | ACCTGC | 2 cut(s) | 2899, 3150 |
| Cac8I | GCNNGC | 9 cut(s) | 217, 538, 903, 907, 1752, 2115, 3147, 3180, 3264 |
| CaiI | CAGNNNCTG | 5 cut(s) | 59, 308, 550, 2105, 2920 |
| CciI | TCATGA | 2 cut(s) | 1875, 2152 |
| CfoI | GCGC | 5 cut(s) | 165, 649, 1452, 2113, 2190 |
| Cfr13I | GGNCC | 7 cut(s) | 1700, 1790, 2090, 2486, 2778, 2911, 3247 |
| Cfr9I | CCCGGG | 1 cut(s) | 1101 |
| ClaI | ATCGAT | 1 cut(s) | 2773 |
| CseI | GACGC | 2 cut(s) | 806, 1329 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1155, 1190 |
| DraI | TTTAAA | 2 cut(s) | 1332, 2979 |
| DraIII | CACNNNGTG | 1 cut(s) | 533 |
| EaeI | YGGCCR | 1 cut(s) | 943 |
| Eam1104I | CTCTTC | 6 cut(s) | 336, 372, 1065, 1229, 1356, 2984 |
| EarI | CTCTTC | 6 cut(s) | 336, 372, 1065, 1229, 1356, 2984 |
| Eco130I | CCWWGG | 3 cut(s) | 1540, 1793, 2672 |
| Eco147I | AGGCCT | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 2 cut(s) | 562, 3516 |
| Eco31I | GGTCTC | 1 cut(s) | 2735 |
| Eco32I | GATATC | 3 cut(s) | 1862, 2158, 2863 |
| Eco47I | GGWCC | 6 cut(s) | 1700, 1790, 2090, 2486, 2911, 3247 |
| Eco57I | CTGAAG | 7 cut(s) | 151, 285, 1253, 1431, 1440, 2289, 3008 |
| Eco81I | CCTNAGG | 1 cut(s) | 1161 |
| Eco88I | CYCGRG | 1 cut(s) | 1101 |
| EcoRI | GAATTC | 1 cut(s) | 2994 |
| EcoRII | CCWGG | 4 cut(s) | 457, 953, 1053, 3038 |
| EcoRV | GATATC | 3 cut(s) | 1862, 2158, 2863 |
| EcoT14I | CCWWGG | 3 cut(s) | 1540, 1793, 2672 |
| EcoT22I | ATGCAT | 3 cut(s) | 1634, 3264, 3580 |
| EcoT38I | GRGCYC | 2 cut(s) | 562, 3516 |
| ErhI | CCWWGG | 3 cut(s) | 1540, 1793, 2672 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 877, 909, 1777, 1809, 1889, 1921, 2262, 2294 |
| FaqI | GGGAC | 2 cut(s) | 686, 3378 |
| FauI | CCCGC | 1 cut(s) | 1743 |
| FbaI | TGATCA | 1 cut(s) | 1621 |
| FblI | GTMKAC | 5 cut(s) | 795, 985, 2139, 2580, 3285 |
| FokI | GGATG | 3 cut(s) | 494, 1511, 1552 |
| FriOI | GRGCYC | 2 cut(s) | 562, 3516 |
| FspBI | CTAG | 9 cut(s) | 65, 405, 819, 1307, 1718, 2120, 2168, 3212, 3281 |
| FspI | TGCGCA | 1 cut(s) | 2189 |
| GlaI | GCGC | 5 cut(s) | 164, 648, 1451, 2112, 2189 |
| GsuI | CTGGAG | 4 cut(s) | 1757, 2082, 2258, 2864 |
| HaeII | RGCGCY | 1 cut(s) | 2114 |
| HaeIII | GGCC | 6 cut(s) | 15, 219, 945, 1606, 1946, 2779 |
| HapII | CCGG | 5 cut(s) | 1102, 1455, 1771, 2224, 2564 |
| HgaI | GACGC | 2 cut(s) | 806, 1329 |
| HhaI | GCGC | 5 cut(s) | 165, 649, 1452, 2113, 2190 |
| Hin1I | GRCGYC | 1 cut(s) | 1340 |
| Hin6I | GCGC | 5 cut(s) | 163, 647, 1450, 2111, 2188 |
| HinP1I | GCGC | 5 cut(s) | 163, 647, 1450, 2111, 2188 |
| HincII | GTYRAC | 4 cut(s) | 726, 1809, 2259, 2688 |
| HindII | GTYRAC | 4 cut(s) | 726, 1809, 2259, 2688 |
| HindIII | AAGCTT | 3 cut(s) | 235, 711, 831 |
| HpaII | CCGG | 5 cut(s) | 1102, 1455, 1771, 2224, 2564 |
| HphI | GGTGA | 5 cut(s) | 497, 608, 857, 1475, 2697 |
| Hpy99I | CGWCG | 1 cut(s) | 23 |
| HpyCH4III | ACNGT | 5 cut(s) | 144, 179, 3112, 3154, 3188 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 977, 1751, 2114, 2465, 2905, 2948, 3575 |
| Hsp92I | GRCGYC | 1 cut(s) | 1340 |
| HspAI | GCGC | 5 cut(s) | 163, 647, 1450, 2111, 2188 |
| KpnI | GGTACC | 1 cut(s) | 2224 |
| Ksp22I | TGATCA | 1 cut(s) | 1621 |
| LguI | GCTCTTC | 2 cut(s) | 1065, 1229 |
| LmnI | GCTCC | 6 cut(s) | 176, 358, 740, 1909, 2128, 3091 |
| LweI | GCATC | 4 cut(s) | 1489, 2161, 3565, 3587 |
| MaeI | CTAG | 9 cut(s) | 65, 405, 819, 1307, 1718, 2120, 2168, 3212, 3281 |
| MaeIII | GTNAC | 4 cut(s) | 389, 845, 1351, 3188 |
| MfeI | CAATTG | 2 cut(s) | 2397, 2520 |
| MflI | RGATCY | 3 cut(s) | 2367, 3422, 3505 |
| MhlI | GDGCHC | 5 cut(s) | 514, 562, 1241, 1756, 3516 |
| MlsI | TGGCCA | 1 cut(s) | 945 |
| MluNI | TGGCCA | 1 cut(s) | 945 |
| MlyI | GAGTC | 9 cut(s) | 706, 1436, 1708, 2111, 2279, 2576, 2863, 3281, 3417 |
| MmeI | TCCRAC | 7 cut(s) | 198, 1159, 1315, 1417, 1916, 2117, 3321 |
| Mox20I | TGGCCA | 1 cut(s) | 945 |
| Mph1103I | ATGCAT | 3 cut(s) | 1634, 3264, 3580 |
| MroXI | GAANNNNTTC | 1 cut(s) | 892 |
| MscI | TGGCCA | 1 cut(s) | 945 |
| MseI | TTAA | 6 cut(s) | 1331, 1784, 2513, 2637, 2978, 3032 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1880, 2502 |
| Msp20I | TGGCCA | 1 cut(s) | 945 |
| MspA1I | CMGCKG | 2 cut(s) | 323, 2207 |
| MspI | CCGG | 5 cut(s) | 1102, 1455, 1771, 2224, 2564 |
| MspR9I | CCNGG | 8 cut(s) | 459, 955, 1055, 1102, 1103, 1455, 1771, 3040 |
| MunI | CAATTG | 2 cut(s) | 2397, 2520 |
| Mva1269I | GAATGC | 4 cut(s) | 1072, 1144, 1634, 3264 |
| MvaI | CCWGG | 4 cut(s) | 459, 955, 1055, 3040 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 977, 1751, 2114, 2465, 2905, 2948, 3575 |
| NciI | CCSGG | 4 cut(s) | 1102, 1103, 1455, 1771 |
| NcoI | CCATGG | 1 cut(s) | 2672 |
| NlaIV | GGNNCC | 6 cut(s) | 141, 1029, 2222, 2540, 2670, 2780 |
| NmuCI | GTSAC | 1 cut(s) | 845 |
| NsbI | TGCGCA | 1 cut(s) | 2189 |
| NsiI | ATGCAT | 3 cut(s) | 1634, 3264, 3580 |
| NspI | RCATGY | 6 cut(s) | 984, 1298, 1874, 2384, 2501, 3266 |
| PaeI | GCATGC | 1 cut(s) | 3266 |
| PagI | TCATGA | 2 cut(s) | 1875, 2152 |
| PasI | CCCWGGG | 1 cut(s) | 3039 |
| PceI | AGGCCT | 1 cut(s) | 15 |
| PciI | ACATGT | 3 cut(s) | 1294, 1870, 2497 |
| PciSI | GCTCTTC | 2 cut(s) | 1065, 1229 |
| PctI | GAATGC | 4 cut(s) | 1072, 1144, 1634, 3264 |
| PdmI | GAANNNNTTC | 1 cut(s) | 892 |
| PfeI | GAWTC | 8 cut(s) | 620, 888, 1642, 2546, 2590, 3105, 3208, 3348 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 536, 2678 |
| PfoI | TCCNGGA | 1 cut(s) | 1769 |
| Ple19I | CGATCG | 1 cut(s) | 113 |
| PleI | GAGTC | 9 cut(s) | 705, 1435, 1708, 2110, 2279, 2576, 2863, 3281, 3416 |
| PpsI | GAGTC | 9 cut(s) | 705, 1435, 1708, 2110, 2279, 2576, 2863, 3281, 3416 |
| PscI | ACATGT | 3 cut(s) | 1294, 1870, 2497 |
| PsiI | TTATAA | 1 cut(s) | 933 |
| Psp6I | CCWGG | 4 cut(s) | 457, 953, 1053, 3038 |
| PspGI | CCWGG | 4 cut(s) | 457, 953, 1053, 3038 |
| PspN4I | GGNNCC | 6 cut(s) | 141, 1029, 2222, 2540, 2670, 2780 |
| PspPI | GGNCC | 7 cut(s) | 1700, 1790, 2090, 2486, 2778, 2911, 3247 |
| PstI | CTGCAG | 2 cut(s) | 2110, 3147 |
| PstNI | CAGNNNCTG | 5 cut(s) | 59, 308, 550, 2105, 2920 |
| PsuI | RGATCY | 3 cut(s) | 2367, 3422, 3505 |
| PvuI | CGATCG | 1 cut(s) | 113 |
| PvuII | CAGCTG | 1 cut(s) | 323 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1880, 2502 |
| SapI | GCTCTTC | 2 cut(s) | 1065, 1229 |
| SaqAI | TTAA | 6 cut(s) | 1331, 1784, 2513, 2637, 2978, 3032 |
| Sau96I | GGNCC | 7 cut(s) | 1700, 1790, 2090, 2486, 2778, 2911, 3247 |
| SbfI | CCTGCAGG | 1 cut(s) | 3147 |
| ScaI | AGTACT | 1 cut(s) | 365 |
| SchI | GAGTC | 9 cut(s) | 706, 1436, 1708, 2111, 2279, 2576, 2863, 3281, 3417 |
| ScrFI | CCNGG | 8 cut(s) | 459, 955, 1055, 1102, 1103, 1455, 1771, 3040 |
| SdaI | CCTGCAGG | 1 cut(s) | 3147 |
| SduI | GDGCHC | 5 cut(s) | 514, 562, 1241, 1756, 3516 |
| SfaNI | GCATC | 4 cut(s) | 1489, 2161, 3565, 3587 |
| SfcI | CTRYAG | 4 cut(s) | 2067, 2106, 3143, 3570 |
| SinI | GGWCC | 6 cut(s) | 1700, 1790, 2090, 2486, 2911, 3247 |
| SmaI | CCCGGG | 1 cut(s) | 1103 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1880, 2502 |
| SmlI | CTYRAG | 3 cut(s) | 203, 3118, 3509 |
| SmoI | CTYRAG | 3 cut(s) | 203, 3118, 3509 |
| SpeI | ACTAGT | 2 cut(s) | 818, 1306 |
| SphI | GCATGC | 1 cut(s) | 3266 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3147 |
| SseBI | AGGCCT | 1 cut(s) | 15 |
| SsiI | CCGC | 2 cut(s) | 1750, 2207 |
| SspI | AATATT | 2 cut(s) | 1654, 3327 |
| SspMI | CTAG | 9 cut(s) | 65, 405, 819, 1307, 1718, 2120, 2168, 3212, 3281 |
| StuI | AGGCCT | 1 cut(s) | 15 |
| StyD4I | CCNGG | 8 cut(s) | 457, 953, 1053, 1100, 1101, 1453, 1769, 3038 |
| StyI | CCWWGG | 3 cut(s) | 1540, 1793, 2672 |
| TaaI | ACNGT | 5 cut(s) | 144, 179, 3112, 3154, 3188 |
| TaqII | GACCGA | 1 cut(s) | 1826 |
| TatI | WGTACW | 5 cut(s) | 363, 1108, 1263, 2131, 2383 |
| TauI | GCSGC | 1 cut(s) | 2210 |
| TfiI | GAWTC | 8 cut(s) | 620, 888, 1642, 2546, 2590, 3105, 3208, 3348 |
| Tru1I | TTAA | 6 cut(s) | 1331, 1784, 2513, 2637, 2978, 3032 |
| Tru9I | TTAA | 6 cut(s) | 1331, 1784, 2513, 2637, 2978, 3032 |
| TseFI | GTSAC | 1 cut(s) | 845 |
| Tsp45I | GTSAC | 1 cut(s) | 845 |
| TspGWI | ACGGA | 3 cut(s) | 494, 3239, 3435 |
| TspMI | CCCGGG | 1 cut(s) | 1101 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 536, 2678 |
| VpaK11BI | GGWCC | 6 cut(s) | 1700, 1790, 2090, 2486, 2911, 3247 |
| XapI | RAATTY | 9 cut(s) | 1034, 1149, 1814, 2323, 2349, 2528, 2970, 2994, 3380 |
| XbaI | TCTAGA | 1 cut(s) | 3211 |
| XceI | RCATGY | 6 cut(s) | 984, 1298, 1874, 2384, 2501, 3266 |
| XmaI | CCCGGG | 1 cut(s) | 1101 |
| XmiI | GTMKAC | 5 cut(s) | 795, 985, 2139, 2580, 3285 |
| XmnI | GAANNNNTTC | 1 cut(s) | 892 |
| XspI | CTAG | 9 cut(s) | 65, 405, 819, 1307, 1718, 2120, 2168, 3212, 3281 |
| ZrmI | AGTACT | 1 cut(s) | 365 |
| Zsp2I | ATGCAT | 3 cut(s) | 1634, 3264, 3580 |