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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48310 AT5G48310 |
| fragaria_vesca | FvH4_6g40180 FvH4_6g40180 FvH4_6g40180 FvH4_6g40180 |
| malus_domestica | MD09G1134500.v1.1 MD17G1123400.v1.1 |
| prunus_persica | Prupe.3G192200_v2.0.a1 Prupe.3G192200_v2.0.a1 Prupe.3G192200_v2.0.a1 |
| pyrus_communis | pycom09g05570 |
| rosa_chinensis | RchiOBHm_Chr2g0155201 |
| rosa_laevigata | RLG00000020825 |
| rosa_multiflora | Rmu_sc0004976.1_g000039 |
| rosa_roxburghii | Rroxscaffold_2G00093880 |
| rosa_rugosa | Rorug02G0445900 |
| rosa_samantha | Rh2AG512200 Rh2BG522900 Rh2CG497200 Rh2DG532600 |
| rosa_wichuraiana | Rw2G042080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 194, 218 |
| AatII | GACGTC | 1 cut(s) | 198 |
| Acc36I | ACCTGC | 1 cut(s) | 2979 |
| AccB1I | GGYRCC | 2 cut(s) | 871, 2497 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2507 |
| AccBSI | CCGCTC | 1 cut(s) | 1527 |
| AccI | GTMKAC | 3 cut(s) | 198, 829, 2409 |
| AccII | CGCG | 1 cut(s) | 149 |
| AciI | CCGC | 5 cut(s) | 656, 1290, 1527, 1609, 2247 |
| AclI | AACGTT | 1 cut(s) | 806 |
| AclWI | GGATC | 3 cut(s) | 47, 2191, 3259 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcuI | CTGAAG | 4 cut(s) | 73, 483, 1092, 2118 |
| AcyI | GRCGYC | 1 cut(s) | 195 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 616, 1005, 1006, 1289, 1996, 2312, 2399, 2507, 2891 |
| AflIII | ACRYGT | 4 cut(s) | 1132, 1699, 1911, 2326 |
| AhlI | ACTAGT | 4 cut(s) | 668, 974, 1144, 1412 |
| AjnI | CCWGG | 4 cut(s) | 15, 797, 1775, 2300 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 583, 615, 1619, 1651 |
| AleI | CACNNNNGTG | 1 cut(s) | 2403 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1369, 1401, 2925, 2957 |
| Alw21I | GWGCWC | 3 cut(s) | 1080, 1585, 2400 |
| Alw26I | GTCTC | 3 cut(s) | 235, 1535, 2063 |
| Alw44I | GTGCAC | 1 cut(s) | 2396 |
| AlwI | GGATC | 3 cut(s) | 47, 2191, 3259 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 424, 1118, 1934, 2749 |
| Ama87I | CYCGRG | 1 cut(s) | 945 |
| AoxI | GGCC | 8 cut(s) | 13, 106, 1433, 1773, 2303, 2606, 2871, 3269 |
| ApaI | GGGCCC | 1 cut(s) | 3273 |
| ApaLI | GTGCAC | 1 cut(s) | 2396 |
| ApeKI | GCWGC | 9 cut(s) | 861, 937, 1571, 1937, 2014, 2036, 2249, 2297, 3326 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1828, 1860 |
| AspLEI | GCGC | 5 cut(s) | 151, 280, 523, 1281, 1942 |
| AsuC2I | CCSGG | 1 cut(s) | 1284 |
| AsuHPI | GGTGA | 7 cut(s) | 46, 482, 647, 1304, 2236, 2526, 2930 |
| AsuII | TTCGAA | 2 cut(s) | 442, 907 |
| AvaI | CYCGRG | 1 cut(s) | 945 |
| AvaII | GGWCC | 7 cut(s) | 760, 1529, 1619, 1919, 2315, 2740, 3076 |
| BaeGI | GKGCMC | 2 cut(s) | 2400, 3273 |
| BanI | GGYRCC | 2 cut(s) | 871, 2497 |
| BanII | GRGCYC | 1 cut(s) | 3273 |
| BbsI | GAAGAC | 1 cut(s) | 2764 |
| Bbv12I | GWGCWC | 3 cut(s) | 1080, 1585, 2400 |
| BbvCI | CCTCAGC | 2 cut(s) | 2544, 3072 |
| BbvI | GCAGC | 9 cut(s) | 848, 924, 1558, 1949, 2001, 2048, 2236, 2284, 3313 |
| BccI | CCATC | 6 cut(s) | 478, 1008, 2026, 2132, 2598, 3056 |
| BciT130I | CCWGG | 4 cut(s) | 17, 799, 1777, 2302 |
| BciVI | GTATCC | 1 cut(s) | 3307 |
| BclI | TGATCA | 1 cut(s) | 1450 |
| BcnI | CCSGG | 1 cut(s) | 1284 |
| BcoDI | GTCTC | 3 cut(s) | 235, 1535, 2063 |
| BcuI | ACTAGT | 4 cut(s) | 668, 974, 1144, 1412 |
| BfmI | CTRYAG | 5 cut(s) | 1248, 1935, 1956, 2972, 3327 |
| BfoI | RGCGCY | 1 cut(s) | 1943 |
| BfuAI | ACCTGC | 1 cut(s) | 2979 |
| BfuI | GTATCC | 1 cut(s) | 3307 |
| BisI | GCNGC | 9 cut(s) | 862, 938, 1572, 1938, 2015, 2037, 2250, 2298, 3327 |
| BlsI | GCNGC | 9 cut(s) | 863, 939, 1573, 1939, 2016, 2038, 2251, 2299, 3328 |
| BmcAI | AGTACT | 2 cut(s) | 673, 2615 |
| Bme1390I | CCNGG | 5 cut(s) | 17, 799, 1284, 1777, 2302 |
| Bme18I | GGWCC | 7 cut(s) | 760, 1529, 1619, 1919, 2315, 2740, 3076 |
| BmeT110I | CYCGRG | 1 cut(s) | 945 |
| BmrFI | CCNGG | 5 cut(s) | 17, 799, 1284, 1777, 2302 |
| BmrI | ACTGGG | 1 cut(s) | 2214 |
| BmsI | GCATC | 2 cut(s) | 1990, 3344 |
| BmuI | ACTGGG | 1 cut(s) | 2214 |
| BpiI | GAAGAC | 1 cut(s) | 2764 |
| BpmI | CTGGAG | 3 cut(s) | 741, 1911, 2693 |
| Bpu10I | CCTNAGC | 4 cut(s) | 179, 1183, 2544, 3072 |
| Bpu14I | TTCGAA | 2 cut(s) | 442, 907 |
| BpuEI | CTTGAG | 2 cut(s) | 110, 2087 |
| BpuMI | CCSGG | 1 cut(s) | 1284 |
| Bsa29I | ATCGAT | 1 cut(s) | 2602 |
| BsaHI | GRCGYC | 1 cut(s) | 195 |
| BsaI | GGTCTC | 1 cut(s) | 235 |
| BsaJI | CCNNGG | 7 cut(s) | 867, 946, 1004, 1282, 1369, 1622, 2501 |
| BsaWI | WCCGGW | 3 cut(s) | 245, 1425, 2052 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 616, 1005, 1006, 1289, 1996, 2312, 2399, 2507, 2891 |
| Bse118I | RCCGGY | 1 cut(s) | 137 |
| Bse1I | ACTGG | 5 cut(s) | 783, 1532, 2220, 2393, 2676 |
| BseBI | CCWGG | 4 cut(s) | 17, 799, 1777, 2302 |
| BseCI | ATCGAT | 1 cut(s) | 2602 |
| BseDI | CCNNGG | 7 cut(s) | 867, 946, 1004, 1282, 1369, 1622, 2501 |
| BseGI | GGATG | 5 cut(s) | 489, 664, 1000, 1714, 2005 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 616, 1005, 1006, 1289, 1996, 2312, 2399, 2507, 2891 |
| BseMII | CTCAG | 6 cut(s) | 170, 1230, 1676, 2535, 2624, 3063 |
| BseNI | ACTGG | 5 cut(s) | 783, 1532, 2220, 2393, 2676 |
| BseRI | GAGGAG | 2 cut(s) | 320, 1168 |
| BseSI | GKGCMC | 2 cut(s) | 2400, 3273 |
| BseXI | GCAGC | 9 cut(s) | 848, 924, 1558, 1949, 2001, 2048, 2236, 2284, 3313 |
| BseYI | CCCAGC | 1 cut(s) | 3105 |
| BsgI | GTGCAG | 1 cut(s) | 847 |
| Bsh1236I | CGCG | 1 cut(s) | 149 |
| Bsh1285I | CGRYCG | 1 cut(s) | 64 |
| BshFI | GGCC | 8 cut(s) | 15, 108, 1435, 1775, 2305, 2608, 2873, 3271 |
| BshNI | GGYRCC | 2 cut(s) | 871, 2497 |
| BshVI | ATCGAT | 1 cut(s) | 2602 |
| BsiEI | CGRYCG | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1080, 1585, 2400 |
| BsiHKCI | CYCGRG | 1 cut(s) | 945 |
| BsiSI | CCGG | 6 cut(s) | 105, 138, 246, 1284, 1426, 2053 |
| BslFI | GGGAC | 3 cut(s) | 61, 2768, 3207 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 616, 1005, 1006, 1289, 1996, 2312, 2399, 2507, 2891 |
| BsmAI | GTCTC | 3 cut(s) | 235, 1535, 2063 |
| BsmFI | GGGAC | 3 cut(s) | 61, 2768, 3207 |
| BsmI | GAATGC | 2 cut(s) | 2288, 3093 |
| BsnI | GGCC | 8 cut(s) | 15, 108, 1435, 1775, 2305, 2608, 2873, 3271 |
| Bso31I | GGTCTC | 1 cut(s) | 235 |
| BsoBI | CYCGRG | 1 cut(s) | 945 |
| Bsp119I | TTCGAA | 2 cut(s) | 442, 907 |
| Bsp120I | GGGCCC | 1 cut(s) | 3269 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1080, 1585, 2400, 3273 |
| Bsp1407I | TGTACA | 2 cut(s) | 1102, 2159 |
| Bsp143I | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| Bsp19I | CCATGG | 2 cut(s) | 1622, 2501 |
| BspACI | CCGC | 5 cut(s) | 656, 1290, 1527, 1609, 2247 |
| BspANI | GGCC | 8 cut(s) | 15, 108, 1435, 1775, 2305, 2608, 2873, 3271 |
| BspCNI | CTCAG | 6 cut(s) | 171, 1231, 1677, 2536, 2623, 3064 |
| BspDI | ATCGAT | 1 cut(s) | 2602 |
| BspFNI | CGCG | 1 cut(s) | 149 |
| BspHI | TCATGA | 1 cut(s) | 1981 |
| BspMAI | CTGCAG | 4 cut(s) | 1939, 1960, 2976, 3331 |
| BspMI | ACCTGC | 1 cut(s) | 2979 |
| BspPI | GGATC | 3 cut(s) | 47, 2191, 3259 |
| BspQI | GCTCTTC | 2 cut(s) | 909, 1068 |
| BspT104I | TTCGAA | 2 cut(s) | 442, 907 |
| BspT107I | GGYRCC | 2 cut(s) | 871, 2497 |
| BspTNI | GGTCTC | 1 cut(s) | 235 |
| BsrBI | CCGCTC | 1 cut(s) | 1527 |
| BsrFI | RCCGGY | 1 cut(s) | 137 |
| BsrGI | TGTACA | 2 cut(s) | 1102, 2159 |
| BsrI | ACTGG | 5 cut(s) | 783, 1532, 2220, 2393, 2676 |
| BssAI | RCCGGY | 1 cut(s) | 137 |
| BssECI | CCNNGG | 7 cut(s) | 867, 946, 1004, 1282, 1369, 1622, 2501 |
| BssMI | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| BssNAI | GTATAC | 1 cut(s) | 830 |
| BssNI | GRCGYC | 1 cut(s) | 195 |
| BssT1I | CCWWGG | 3 cut(s) | 1369, 1622, 2501 |
| Bst1107I | GTATAC | 1 cut(s) | 830 |
| Bst2UI | CCWGG | 4 cut(s) | 17, 799, 1777, 2302 |
| Bst4CI | ACNGT | 8 cut(s) | 65, 1818, 2402, 2843, 2913, 2941, 2983, 3017 |
| Bst6I | CTCTTC | 7 cut(s) | 92, 297, 909, 1068, 1194, 1338, 2813 |
| BstACI | GRCGYC | 1 cut(s) | 195 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2294 |
| BstAUI | TGTACA | 2 cut(s) | 1102, 2159 |
| BstBI | TTCGAA | 2 cut(s) | 442, 907 |
| BstDEI | CTNAG | 9 cut(s) | 179, 614, 1183, 1239, 1685, 1735, 2544, 2610, 3072 |
| BstDSI | CCRYGG | 2 cut(s) | 1622, 2501 |
| BstF5I | GGATG | 5 cut(s) | 489, 664, 1000, 1714, 2005 |
| BstFNI | CGCG | 1 cut(s) | 149 |
| BstH2I | RGCGCY | 1 cut(s) | 1943 |
| BstHHI | GCGC | 5 cut(s) | 151, 280, 523, 1281, 1942 |
| BstKTI | GATC | 9 cut(s) | 42, 1453, 1558, 2199, 2233, 2479, 2775, 3254, 3299 |
| BstMAI | GTCTC | 3 cut(s) | 235, 1535, 2063 |
| BstMBI | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| BstMCI | CGRYCG | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 821, 1287, 1580, 1943, 2294, 3332 |
| BstNI | CCWGG | 4 cut(s) | 17, 799, 1777, 2302 |
| BstNSI | RCATGY | 8 cut(s) | 828, 1136, 1703, 1915, 2065, 2330, 2636, 3095 |
| BstSCI | CCNGG | 5 cut(s) | 15, 797, 1282, 1775, 2300 |
| BstSFI | CTRYAG | 5 cut(s) | 1248, 1935, 1956, 2972, 3327 |
| BstSLI | GKGCMC | 2 cut(s) | 2400, 3273 |
| BstUI | CGCG | 1 cut(s) | 149 |
| BstV1I | GCAGC | 9 cut(s) | 848, 924, 1558, 1949, 2001, 2048, 2236, 2284, 3313 |
| BstV2I | GAAGAC | 1 cut(s) | 2764 |
| BstX2I | RGATCY | 2 cut(s) | 2196, 3251 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 757, 1629 |
| BstYI | RGATCY | 2 cut(s) | 2196, 3251 |
| BstZ17I | GTATAC | 1 cut(s) | 830 |
| Bsu15I | ATCGAT | 1 cut(s) | 2602 |
| BsuI | GTATCC | 1 cut(s) | 3307 |
| BsuRI | GGCC | 8 cut(s) | 15, 108, 1435, 1775, 2305, 2608, 2873, 3271 |
| BsuTUI | ATCGAT | 1 cut(s) | 2602 |
| BtgI | CCRYGG | 2 cut(s) | 1622, 2501 |
| BtsCI | GGATG | 5 cut(s) | 489, 664, 1000, 1714, 2005 |
| BtsI | GCAGTG | 1 cut(s) | 190 |
| BtsIMutI | CAGTG | 7 cut(s) | 190, 790, 1236, 2400, 2669, 2839, 3095 |
| BveI | ACCTGC | 1 cut(s) | 2979 |
| CaiI | CAGNNNCTG | 4 cut(s) | 424, 1118, 1934, 2749 |
| CciI | TCATGA | 1 cut(s) | 1981 |
| CfoI | GCGC | 5 cut(s) | 151, 280, 523, 1281, 1942 |
| Cfr10I | RCCGGY | 1 cut(s) | 137 |
| ClaI | ATCGAT | 1 cut(s) | 2602 |
| CseI | GACGC | 2 cut(s) | 208, 3341 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 999, 1034 |
| DdeI | CTNAG | 9 cut(s) | 179, 614, 1183, 1239, 1685, 1735, 2544, 2610, 3072 |
| DpnI | GATC | 9 cut(s) | 41, 1452, 1557, 2198, 2232, 2478, 2774, 3253, 3298 |
| DpnII | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| DraI | TTTAAA | 1 cut(s) | 1170 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 194, 218 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 194, 218 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 7 cut(s) | 92, 297, 909, 1068, 1194, 1338, 2813 |
| EarI | CTCTTC | 7 cut(s) | 92, 297, 909, 1068, 1194, 1338, 2813 |
| Eco130I | CCWWGG | 3 cut(s) | 1369, 1622, 2501 |
| Eco147I | AGGCCT | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 1 cut(s) | 3273 |
| Eco31I | GGTCTC | 1 cut(s) | 235 |
| Eco32I | GATATC | 4 cut(s) | 1691, 1987, 2386, 2857 |
| Eco47I | GGWCC | 7 cut(s) | 760, 1529, 1619, 1919, 2315, 2740, 3076 |
| Eco57I | CTGAAG | 4 cut(s) | 73, 483, 1092, 2118 |
| Eco88I | CYCGRG | 1 cut(s) | 945 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3270 |
| EcoRI | GAATTC | 3 cut(s) | 1383, 2823, 3100 |
| EcoRII | CCWGG | 4 cut(s) | 15, 797, 1775, 2300 |
| EcoRV | GATATC | 4 cut(s) | 1691, 1987, 2386, 2857 |
| EcoT14I | CCWWGG | 3 cut(s) | 1369, 1622, 2501 |
| EcoT22I | ATGCAT | 2 cut(s) | 1217, 3093 |
| EcoT38I | GRGCYC | 1 cut(s) | 3273 |
| ErhI | CCWWGG | 3 cut(s) | 1369, 1622, 2501 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1191, 1223, 2091, 2123 |
| FaqI | GGGAC | 3 cut(s) | 61, 2768, 3207 |
| FbaI | TGATCA | 1 cut(s) | 1450 |
| FblI | GTMKAC | 3 cut(s) | 198, 829, 2409 |
| Fnu4HI | GCNGC | 9 cut(s) | 862, 938, 1572, 1938, 2015, 2037, 2250, 2298, 3327 |
| FokI | GGATG | 5 cut(s) | 496, 671, 987, 1721, 2012 |
| FriOI | GRGCYC | 1 cut(s) | 3273 |
| Fsp4HI | GCNGC | 9 cut(s) | 862, 938, 1572, 1938, 2015, 2037, 2250, 2298, 3327 |
| GlaI | GCGC | 5 cut(s) | 150, 279, 522, 1280, 1941 |
| GluI | GCNGC | 9 cut(s) | 862, 938, 1572, 1938, 2015, 2037, 2250, 2298, 3327 |
| GsaI | CCCAGC | 1 cut(s) | 3109 |
| GsuI | CTGGAG | 3 cut(s) | 741, 1911, 2693 |
| HaeII | RGCGCY | 1 cut(s) | 1943 |
| HaeIII | GGCC | 8 cut(s) | 15, 108, 1435, 1775, 2305, 2608, 2873, 3271 |
| HapII | CCGG | 6 cut(s) | 105, 138, 246, 1284, 1426, 2053 |
| HgaI | GACGC | 2 cut(s) | 208, 3341 |
| HhaI | GCGC | 5 cut(s) | 151, 280, 523, 1281, 1942 |
| Hin1I | GRCGYC | 1 cut(s) | 195 |
| Hin6I | GCGC | 5 cut(s) | 149, 278, 521, 1279, 1940 |
| HinP1I | GCGC | 5 cut(s) | 149, 278, 521, 1279, 1940 |
| HincII | GTYRAC | 4 cut(s) | 199, 706, 2517, 3115 |
| HindII | GTYRAC | 4 cut(s) | 199, 706, 2517, 3115 |
| HindIII | AAGCTT | 1 cut(s) | 681 |
| HpaII | CCGG | 6 cut(s) | 105, 138, 246, 1284, 1426, 2053 |
| HphI | GGTGA | 7 cut(s) | 46, 482, 647, 1304, 2236, 2526, 2930 |
| Hpy188I | TCNGA | 9 cut(s) | 61, 235, 262, 426, 502, 688, 1005, 1130, 2098 |
| Hpy99I | CGWCG | 8 cut(s) | 175, 200, 203, 206, 209, 212, 215, 224 |
| HpyCH4III | ACNGT | 8 cut(s) | 65, 1818, 2402, 2843, 2913, 2941, 2983, 3017 |
| HpyCH4IV | ACGT | 4 cut(s) | 195, 806, 1080, 3351 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 821, 1287, 1580, 1943, 2294, 3332 |
| HpyF3I | CTNAG | 9 cut(s) | 179, 614, 1183, 1239, 1685, 1735, 2544, 2610, 3072 |
| HpySE526I | ACGT | 4 cut(s) | 195, 806, 1080, 3351 |
| Hsp92I | GRCGYC | 1 cut(s) | 195 |
| HspAI | GCGC | 5 cut(s) | 149, 278, 521, 1279, 1940 |
| Ksp22I | TGATCA | 1 cut(s) | 1450 |
| Kzo9I | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| LguI | GCTCTTC | 2 cut(s) | 909, 1068 |
| LmnI | GCTCC | 5 cut(s) | 98, 172, 1255, 1957, 3033 |
| Lsp1109I | GCAGC | 9 cut(s) | 848, 924, 1558, 1949, 2001, 2048, 2236, 2284, 3313 |
| LweI | GCATC | 2 cut(s) | 1990, 3344 |
| MaeII | ACGT | 4 cut(s) | 195, 806, 1080, 3351 |
| MaeIII | GTNAC | 6 cut(s) | 185, 1189, 1203, 1875, 2090, 2767 |
| MalI | GATC | 9 cut(s) | 41, 1452, 1557, 2198, 2232, 2478, 2774, 3253, 3298 |
| MbiI | CCGCTC | 1 cut(s) | 1527 |
| MboI | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| MfeI | CAATTG | 1 cut(s) | 2226 |
| MflI | RGATCY | 2 cut(s) | 2196, 3251 |
| MhlI | GDGCHC | 4 cut(s) | 1080, 1585, 2400, 3273 |
| MlyI | GAGTC | 9 cut(s) | 711, 1211, 1238, 1327, 1537, 1940, 2405, 2692, 3110 |
| Mph1103I | ATGCAT | 2 cut(s) | 1217, 3093 |
| MseI | TTAA | 7 cut(s) | 371, 1169, 2466, 2664, 2705, 2730, 2861 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1210, 1446, 1627, 1709, 2331, 2403 |
| MspA1I | CMGCKG | 1 cut(s) | 2249 |
| MspI | CCGG | 6 cut(s) | 105, 138, 246, 1284, 1426, 2053 |
| MspR9I | CCNGG | 5 cut(s) | 17, 799, 1284, 1777, 2302 |
| MunI | CAATTG | 1 cut(s) | 2226 |
| Mva1269I | GAATGC | 2 cut(s) | 2288, 3093 |
| MvaI | CCWGG | 4 cut(s) | 17, 799, 1777, 2302 |
| MvnI | CGCG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 821, 1287, 1580, 1943, 2294, 3332 |
| NciI | CCSGG | 1 cut(s) | 1284 |
| NcoI | CCATGG | 2 cut(s) | 1622, 2501 |
| NdeII | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| NmuCI | GTSAC | 3 cut(s) | 185, 1203, 1875 |
| NsiI | ATGCAT | 2 cut(s) | 1217, 3093 |
| NspI | RCATGY | 8 cut(s) | 828, 1136, 1703, 1915, 2065, 2330, 2636, 3095 |
| NspV | TTCGAA | 2 cut(s) | 442, 907 |
| OliI | CACNNNNGTG | 1 cut(s) | 2403 |
| PaeI | GCATGC | 1 cut(s) | 3095 |
| PagI | TCATGA | 1 cut(s) | 1981 |
| PceI | AGGCCT | 1 cut(s) | 15 |
| PciI | ACATGT | 4 cut(s) | 1132, 1699, 1911, 2326 |
| PciSI | GCTCTTC | 2 cut(s) | 909, 1068 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 201, 204, 207, 210, 216, 219 |
| PctI | GAATGC | 2 cut(s) | 2288, 3093 |
| PflFI | GACNNNGTC | 1 cut(s) | 701 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2507 |
| PkrI | GCNGC | 9 cut(s) | 863, 939, 1573, 1939, 2016, 2038, 2251, 2299, 3328 |
| PleI | GAGTC | 9 cut(s) | 710, 1210, 1238, 1326, 1537, 1939, 2405, 2692, 3110 |
| PpsI | GAGTC | 9 cut(s) | 710, 1210, 1238, 1326, 1537, 1939, 2405, 2692, 3110 |
| PscI | ACATGT | 4 cut(s) | 1132, 1699, 1911, 2326 |
| Psp1406I | AACGTT | 1 cut(s) | 806 |
| Psp6I | CCWGG | 4 cut(s) | 15, 797, 1775, 2300 |
| PspFI | CCCAGC | 1 cut(s) | 3105 |
| PspGI | CCWGG | 4 cut(s) | 15, 797, 1775, 2300 |
| PspOMI | GGGCCC | 1 cut(s) | 3269 |
| PstI | CTGCAG | 4 cut(s) | 1939, 1960, 2976, 3331 |
| PstNI | CAGNNNCTG | 4 cut(s) | 424, 1118, 1934, 2749 |
| PsuI | RGATCY | 2 cut(s) | 2196, 3251 |
| PsyI | GACNNNGTC | 1 cut(s) | 701 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1210, 1446, 1627, 1709, 2331, 2403 |
| SalI | GTCGAC | 1 cut(s) | 197 |
| SapI | GCTCTTC | 2 cut(s) | 909, 1068 |
| SaqAI | TTAA | 7 cut(s) | 371, 1169, 2466, 2664, 2705, 2730, 2861 |
| SatI | GCNGC | 9 cut(s) | 862, 938, 1572, 1938, 2015, 2037, 2250, 2298, 3327 |
| Sau3AI | GATC | 9 cut(s) | 39, 1450, 1555, 2196, 2230, 2476, 2772, 3251, 3296 |
| SbfI | CCTGCAGG | 1 cut(s) | 2976 |
| ScaI | AGTACT | 2 cut(s) | 673, 2615 |
| SchI | GAGTC | 9 cut(s) | 711, 1211, 1238, 1327, 1537, 1940, 2405, 2692, 3110 |
| ScrFI | CCNGG | 5 cut(s) | 17, 799, 1284, 1777, 2302 |
| SdaI | CCTGCAGG | 1 cut(s) | 2976 |
| SduI | GDGCHC | 4 cut(s) | 1080, 1585, 2400, 3273 |
| SfaNI | GCATC | 2 cut(s) | 1990, 3344 |
| SfcI | CTRYAG | 5 cut(s) | 1248, 1935, 1956, 2972, 3327 |
| SfuI | TTCGAA | 2 cut(s) | 442, 907 |
| SgrDI | CGTCGACG | 1 cut(s) | 197 |
| SinI | GGWCC | 7 cut(s) | 760, 1529, 1619, 1919, 2315, 2740, 3076 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1210, 1446, 1627, 1709, 2331, 2403 |
| SmlI | CTYRAG | 2 cut(s) | 125, 2066 |
| SmoI | CTYRAG | 2 cut(s) | 125, 2066 |
| SpeI | ACTAGT | 4 cut(s) | 668, 974, 1144, 1412 |
| SphI | GCATGC | 1 cut(s) | 3095 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2976 |
| SseBI | AGGCCT | 1 cut(s) | 15 |
| SsiI | CCGC | 5 cut(s) | 656, 1290, 1527, 1609, 2247 |
| SspI | AATATT | 1 cut(s) | 3156 |
| StuI | AGGCCT | 1 cut(s) | 15 |
| StyD4I | CCNGG | 5 cut(s) | 15, 797, 1282, 1775, 2300 |
| StyI | CCWWGG | 3 cut(s) | 1369, 1622, 2501 |
| TaaI | ACNGT | 8 cut(s) | 65, 1818, 2402, 2843, 2913, 2941, 2983, 3017 |
| TaiI | ACGT | 4 cut(s) | 198, 809, 1083, 3354 |
| TaqII | GACCGA | 1 cut(s) | 217 |
| TatI | WGTACW | 8 cut(s) | 665, 671, 1102, 1490, 1960, 2159, 2212, 2613 |
| Tru1I | TTAA | 7 cut(s) | 371, 1169, 2466, 2664, 2705, 2730, 2861 |
| Tru9I | TTAA | 7 cut(s) | 371, 1169, 2466, 2664, 2705, 2730, 2861 |
| TscAI | CASTG | 7 cut(s) | 190, 790, 1243, 2400, 2676, 2846, 3102 |
| TseFI | GTSAC | 3 cut(s) | 185, 1203, 1875 |
| TseI | GCWGC | 9 cut(s) | 861, 937, 1571, 1937, 2014, 2036, 2249, 2297, 3326 |
| Tsp45I | GTSAC | 3 cut(s) | 185, 1203, 1875 |
| TspGWI | ACGGA | 5 cut(s) | 159, 299, 875, 1471, 3068 |
| TspRI | CASTG | 7 cut(s) | 190, 790, 1243, 2400, 2676, 2846, 3102 |
| Tth111I | GACNNNGTC | 1 cut(s) | 701 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2507 |
| VneI | GTGCAC | 1 cut(s) | 2396 |
| VpaK11BI | GGWCC | 7 cut(s) | 760, 1529, 1619, 1919, 2315, 2740, 3076 |
| XbaI | TCTAGA | 1 cut(s) | 3040 |
| XceI | RCATGY | 8 cut(s) | 828, 1136, 1703, 1915, 2065, 2330, 2636, 3095 |
| XmiI | GTMKAC | 3 cut(s) | 198, 829, 2409 |
| ZraI | GACGTC | 1 cut(s) | 196 |
| ZrmI | AGTACT | 2 cut(s) | 673, 2615 |
| Zsp2I | ATGCAT | 2 cut(s) | 1217, 3093 |