Prupe.3G211600_v2.0.a1

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
21643038 .. 21645875
2838 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G211600.3

Sequence Viewer

Length: 1785 bp
ATGGTTTTGATATCAAGGGATGGTGAGAAAGAAGGTGCAAGCGATGGAGCTGTGGTGGATTTTAGAGGGAATCCTGTGGACAAGTCCAAAACTGGTGGATGGCTTGCTGCAGGGCTTATTTTGGGAATTGAACTGGCTGAGAGGATCTGTGTGATGGGCATCTCTATGAATCTAGTAACTTACTTGGTTGGAAATTTGCATATATCTTCTGCAAAATCTGCAACCATAGTGACCAATTTCATGGGCACTTTGAACCTCCTTGGCCTCCTTGGTGGGTTTCTAGCAGATGCTAAACTGGGAAGGTACTTGACTGTCGCCCTTTCTGCAACAATAACTGGTCTGGGGATAATTTTGTTGACATTGGCAACATCCATTCCTAGCATGAGACCACCTCCATGTGATGACTACAGAAAGCAACATCATGAATGTATTGAGGCCAATGGAAAGCAATTAGCTCTGCTCTATGCTGCTTTATATACTACAGCACTAGGTGGTGGTGGTATAAAATCCAATGTCTCAGGTTTTGGGTCTGATCAATTTGATGGCAGAGACCCCAGGGAAGAGAAGTCCATGATCTTCTTCTTCAACAGGTTCTACTTTGGCATTAGCATTGGCTCTCTGTTTGCTGTTATTGTGCTGGTGTATGTACAAGATAATGTTGGCAGGGGGTTGGGTTATGGAATATCGGCAGGGGGGATGATCATCGCACTTGTTGTGTTGCTCTCTGGGACGCCGTTTTATAGATTCCATAAGCCTCAAGGCAGCCCTTTAACTGTCATATGGAGGGTGATATTTTTGGCTTGGAAGAAGAGGGCTTACCCTTATCCTGCTCATCCAAGCCTTTTGAATGAATACCAAGAAGCCAAGATCCCCCACACACAGAGGCTCAAGTGTCTAGACAAAGCTGCAATCCTAGATGAATATGCTTCTGCTGAAGGAAACAGAAGCAACCCATGGATAGTATCCACAGTGAACCAAGTTGAAGAGGTGAAACTGGTTTTCAAGCTCATGCCAGTCTGGTCGACATGTATTCTCTTTTGGACAGTCTACTCTCAAATGACTACCTTCACCATTGAACAAGCCACCTTCATGAACCGAAAAATAGGCTCCTTTGTTATCCCTTCGGGTTCTTTCTCAGCCTTTCTCTTCATCACCATTCTCCTGTTTACTTCCTTAAACGAGAAACTCTTTGTCCCCCTTGCTCGAAAACTCACCAACACTGCCCAAGGAATAACAAGCCTTCAGAGGATTGGAATTGGACTCGTTTTATCAACGGCTGCTATGATTGCTGCAGCAATAGTAGAGAAACAAAGAAGGGAATTCGCTGTTCACCAAAATACCAAAATAAGTGCTTTCTGGCTTGTCCTACAATACTTCCTAGTGGGTGCTGGAGAAGCTTTTGTCTATGTTGGACAACTTGAATTTTTCATCAGAGAGGCACCGGACAGGATGAAGTCCATGAGCACAGGGCTTTTCTTAAGCACCATCTCAATGGGGTTCTTTGTTAGCACTCTGTTGGTGACTCTGGTGGACAAAGTGACTAAGAAGAGCTGGCTGAGGAGTAACTTGAACAAGGGAAGGGTGGATTACTTCTACTTGCTGCTTGCAGTGCTCGGAGCTTTAAATTTCTTAGTGTTTCTTGCCTTTGCAATGAGACACCAGTACAAAGGCCAGCAGCACATTAGCCCTAACAATAGTGTCAAAAAGGAGCATAAGAACTCAAATGGCATAAGAGTTGAAGAGATGGCAGAGATGATAAGAATTGAGGCAAAGGAAGGACCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

595

Amino Acids

65.58

Weight (kDa)

9.45

Isoelectric Point (pI)

25.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1438
AccI GTMKAC 2 cut(s) 1022, 1047
AclWI GGATC 2 cut(s) 152, 862
AcsI RAATTY 4 cut(s) 193, 1319, 1421, 1624
AcuI CTGAAG 2 cut(s) 954, 1226
AcyI GRCGYC 1 cut(s) 731
AdeI CACNNNGTG 1 cut(s) 491
AfaI GTAC 3 cut(s) 305, 648, 1664
AflII CTTAAG 1 cut(s) 1477
AflIII ACRYGT 1 cut(s) 1025
AjnI CCWGG 1 cut(s) 554
AluBI AGCT 7 cut(s) 50, 455, 905, 1006, 1397, 1551, 1619
AluI AGCT 7 cut(s) 50, 455, 905, 1006, 1397, 1551, 1619
Alw21I GWGCWC 2 cut(s) 1466, 1614
Alw26I GTCTC 4 cut(s) 379, 520, 543, 1648
AlwI GGATC 2 cut(s) 152, 862
AoxI GGCC 3 cut(s) 262, 435, 1669
ApeKI GCWGC 9 cut(s) 107, 467, 762, 905, 1277, 1289, 1292, 1600, 1675
ApoI RAATTY 4 cut(s) 193, 1319, 1421, 1624
AspS9I GGNCC 1 cut(s) 1778
AsuHPI GGTGA 8 cut(s) 35, 799, 1000, 1060, 1144, 1204, 1322, 1531
AvaII GGWCC 1 cut(s) 1778
BaeGI GKGCMC 1 cut(s) 248
BanI GGYRCC 1 cut(s) 1438
BarI GAAGNNNNNNTAC 2 cut(s) 800, 832
Bbv12I GWGCWC 2 cut(s) 1466, 1614
BbvCI CCTCAGC 1 cut(s) 1556
BbvI GCAGC 9 cut(s) 94, 454, 774, 892, 1264, 1276, 1304, 1587, 1687
BccI CCATC 7 cut(s) 14, 38, 93, 148, 536, 1493, 1738
BceAI ACGGC 2 cut(s) 718, 1290
BciT130I CCWGG 1 cut(s) 556
BciVI GTATCC 1 cut(s) 973
BclI TGATCA 2 cut(s) 532, 699
BcoDI GTCTC 4 cut(s) 379, 520, 543, 1648
BfaI CTAG 8 cut(s) 173, 281, 378, 488, 896, 914, 1379, 1783
BfmI CTRYAG 4 cut(s) 108, 406, 480, 1290
BfrI CTTAAG 1 cut(s) 1477
BfuI GTATCC 1 cut(s) 973
BisI GCNGC 9 cut(s) 108, 468, 763, 906, 1278, 1290, 1293, 1601, 1676
BlsI GCNGC 9 cut(s) 109, 469, 764, 907, 1279, 1291, 1294, 1602, 1677
Bme1390I CCNGG 1 cut(s) 556
Bme18I GGWCC 1 cut(s) 1778
BmgT120I GGNCC 1 cut(s) 1778
BmiI GGNNCC 3 cut(s) 1108, 1440, 1780
BmrFI CCNGG 1 cut(s) 556
BmrI ACTGGG 1 cut(s) 305
BmsI GCATC 2 cut(s) 168, 277
BmuI ACTGGG 1 cut(s) 305
BplI GAGNNNNNCTC 2 cut(s) 376, 408
BpmI CTGGAG 1 cut(s) 1410
Bpu10I CCTNAGC 1 cut(s) 1556
BpuEI CTTGAG 2 cut(s) 741, 872
BsaBI GATNNNNATC 2 cut(s) 158, 701
BsaHI GRCGYC 1 cut(s) 731
BsaI GGTCTC 2 cut(s) 379, 543
BsaJI CCNNGG 6 cut(s) 259, 268, 554, 555, 953, 1225
BsaWI WCCGGW 1 cut(s) 1441
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bse1I ACTGG 7 cut(s) 97, 138, 300, 340, 999, 1013, 1660
Bse3DI GCAATG 1 cut(s) 1656
Bse8I GATNNNNATC 2 cut(s) 158, 701
BseBI CCWGG 1 cut(s) 556
BseDI CCNNGG 6 cut(s) 259, 268, 554, 555, 953, 1225
BseGI GGATG 6 cut(s) 25, 104, 368, 702, 832, 1455
BseJI GATNNNNATC 2 cut(s) 158, 701
BseMI GCAATG 1 cut(s) 1656
BseMII CTCAG 4 cut(s) 129, 531, 1149, 1547
BseNI ACTGG 7 cut(s) 97, 138, 300, 340, 999, 1013, 1660
BseRI GAGGAG 1 cut(s) 1573
BseSI GKGCMC 1 cut(s) 248
BseXI GCAGC 9 cut(s) 94, 454, 774, 892, 1264, 1276, 1304, 1587, 1687
BshFI GGCC 3 cut(s) 264, 437, 1671
BshNI GGYRCC 1 cut(s) 1438
BsiHKAI GWGCWC 2 cut(s) 1466, 1614
BsiSI CCGG 1 cut(s) 1442
BslFI GGGAC 2 cut(s) 742, 1178
BsmAI GTCTC 4 cut(s) 379, 520, 543, 1648
BsmFI GGGAC 2 cut(s) 742, 1178
BsnI GGCC 3 cut(s) 264, 437, 1671
Bso31I GGTCTC 2 cut(s) 379, 543
Bsp1286I GDGCHC 3 cut(s) 248, 1466, 1614
Bsp1407I TGTACA 1 cut(s) 646
Bsp143I GATC 5 cut(s) 144, 532, 573, 699, 867
Bsp19I CCATGG 1 cut(s) 953
BspANI GGCC 3 cut(s) 264, 437, 1671
BspCNI CTCAG 4 cut(s) 130, 530, 1148, 1548
BspHI TCATGA 2 cut(s) 421, 1089
BspLI GGNNCC 3 cut(s) 1108, 1440, 1780
BspMAI CTGCAG 2 cut(s) 112, 1294
BspPI GGATC 2 cut(s) 152, 862
BspQI GCTCTTC 1 cut(s) 1541
BspT107I GGYRCC 1 cut(s) 1438
BspTI CTTAAG 1 cut(s) 1477
BspTNI GGTCTC 2 cut(s) 379, 543
BsrDI GCAATG 1 cut(s) 1656
BsrGI TGTACA 1 cut(s) 646
BsrI ACTGG 7 cut(s) 97, 138, 300, 340, 999, 1013, 1660
BssECI CCNNGG 6 cut(s) 259, 268, 554, 555, 953, 1225
BssMI GATC 5 cut(s) 144, 532, 573, 699, 867
BssNI GRCGYC 1 cut(s) 731
BssT1I CCWWGG 4 cut(s) 259, 268, 953, 1225
Bst2UI CCWGG 1 cut(s) 556
Bst4CI ACNGT 4 cut(s) 313, 775, 970, 1045
Bst6I CTCTTC 6 cut(s) 555, 803, 978, 1151, 1541, 1734
BstACI GRCGYC 1 cut(s) 731
BstAFI CTTAAG 1 cut(s) 1477
BstAPI GCANNNNNTGC 1 cut(s) 218
BstAUI TGTACA 1 cut(s) 646
BstC8I GCNNGC 5 cut(s) 40, 105, 1553, 1605, 1673
BstDEI CTNAG 6 cut(s) 138, 517, 1135, 1542, 1556, 1630
BstDSI CCRYGG 1 cut(s) 953
BstF5I GGATG 6 cut(s) 25, 104, 368, 702, 832, 1455
BstKTI GATC 5 cut(s) 147, 535, 576, 702, 870
BstMAI GTCTC 4 cut(s) 379, 520, 543, 1648
BstMBI GATC 5 cut(s) 144, 532, 573, 699, 867
BstMWI GCNNNNNNNGC 5 cut(s) 218, 323, 1286, 1394, 1609
BstNI CCWGG 1 cut(s) 556
BstNSI RCATGY 1 cut(s) 1029
BstSCI CCNGG 1 cut(s) 554
BstSFI CTRYAG 4 cut(s) 108, 406, 480, 1290
BstSLI GKGCMC 1 cut(s) 248
BstV1I GCAGC 9 cut(s) 94, 454, 774, 892, 1264, 1276, 1304, 1587, 1687
BstX2I RGATCY 2 cut(s) 144, 867
BstXI CCANNNNNNTGG 2 cut(s) 241, 1492
BstYI RGATCY 2 cut(s) 144, 867
BsuI GTATCC 1 cut(s) 973
BsuRI GGCC 3 cut(s) 264, 437, 1671
BtgI CCRYGG 1 cut(s) 953
BtgZI GCGATG 2 cut(s) 57, 688
BtsCI GGATG 6 cut(s) 25, 104, 368, 702, 832, 1455
BtsI GCAGTG 2 cut(s) 1218, 1614
BtsIMutI CAGTG 3 cut(s) 975, 1218, 1614
Cac8I GCNNGC 5 cut(s) 40, 105, 1553, 1605, 1673
CciI TCATGA 2 cut(s) 421, 1089
Cfr13I GGNCC 1 cut(s) 1778
CseI GACGC 1 cut(s) 739
Csp6I GTAC 3 cut(s) 304, 647, 1663
CspCI CAANNNNNGTGG 2 cut(s) 76, 111
CviQI GTAC 3 cut(s) 304, 647, 1663
DdeI CTNAG 6 cut(s) 138, 517, 1135, 1542, 1556, 1630
DpnI GATC 5 cut(s) 146, 534, 575, 701, 869
DpnII GATC 5 cut(s) 144, 532, 573, 699, 867
DraI TTTAAA 1 cut(s) 1623
DraIII CACNNNGTG 1 cut(s) 491
Eam1104I CTCTTC 6 cut(s) 555, 803, 978, 1151, 1541, 1734
EarI CTCTTC 6 cut(s) 555, 803, 978, 1151, 1541, 1734
Eco130I CCWWGG 4 cut(s) 259, 268, 953, 1225
Eco31I GGTCTC 2 cut(s) 379, 543
Eco32I GATATC 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 1778
Eco57I CTGAAG 2 cut(s) 954, 1226
EcoO109I RGGNCCY 1 cut(s) 1778
EcoRI GAATTC 1 cut(s) 1319
EcoRII CCWGG 1 cut(s) 554
EcoRV GATATC 1 cut(s) 12
EcoT14I CCWWGG 4 cut(s) 259, 268, 953, 1225
ErhI CCWWGG 4 cut(s) 259, 268, 953, 1225
FaqI GGGAC 2 cut(s) 742, 1178
FauNDI CATATG 1 cut(s) 779
FbaI TGATCA 2 cut(s) 532, 699
FblI GTMKAC 2 cut(s) 1022, 1047
Fnu4HI GCNGC 9 cut(s) 108, 468, 763, 906, 1278, 1290, 1293, 1601, 1676
FokI GGATG 6 cut(s) 32, 111, 355, 709, 819, 1462
Fsp4HI GCNGC 9 cut(s) 108, 468, 763, 906, 1278, 1290, 1293, 1601, 1676
FspBI CTAG 8 cut(s) 173, 281, 378, 488, 896, 914, 1379, 1783
GluI GCNGC 9 cut(s) 108, 468, 763, 906, 1278, 1290, 1293, 1601, 1676
GsuI CTGGAG 1 cut(s) 1410
HaeIII GGCC 3 cut(s) 264, 437, 1671
HapII CCGG 1 cut(s) 1442
HgaI GACGC 1 cut(s) 739
Hin1I GRCGYC 1 cut(s) 731
HincII GTYRAC 2 cut(s) 357, 1023
HindII GTYRAC 2 cut(s) 357, 1023
HindIII AAGCTT 1 cut(s) 1395
HinfI GANTC 5 cut(s) 70, 169, 744, 1260, 1522
HpaII CCGG 1 cut(s) 1442
HphI GGTGA 8 cut(s) 35, 799, 1000, 1060, 1144, 1204, 1322, 1531
Hpy166II GTNNAC 8 cut(s) 79, 357, 973, 1023, 1048, 1167, 1330, 1531
Hpy188I TCNGA 4 cut(s) 532, 1245, 1433, 1616
Hpy188III TCNNGA 3 cut(s) 422, 896, 1090
Hpy8I GTNNAC 8 cut(s) 79, 357, 973, 1023, 1048, 1167, 1330, 1531
HpyCH4III ACNGT 4 cut(s) 313, 775, 970, 1045
HpyF10VI GCNNNNNNNGC 5 cut(s) 218, 323, 1286, 1394, 1609
HpyF3I CTNAG 6 cut(s) 138, 517, 1135, 1542, 1556, 1630
Hsp92I GRCGYC 1 cut(s) 731
Ksp22I TGATCA 2 cut(s) 532, 699
Kzo9I GATC 5 cut(s) 144, 532, 573, 699, 867
LguI GCTCTTC 1 cut(s) 1541
LmnI GCTCC 4 cut(s) 47, 1112, 1616, 1708
Lsp1109I GCAGC 9 cut(s) 94, 454, 774, 892, 1264, 1276, 1304, 1587, 1687
LweI GCATC 2 cut(s) 168, 277
MaeI CTAG 8 cut(s) 173, 281, 378, 488, 896, 914, 1379, 1783
MaeIII GTNAC 5 cut(s) 175, 229, 1519, 1537, 1562
MalI GATC 5 cut(s) 146, 534, 575, 701, 869
MboI GATC 5 cut(s) 144, 532, 573, 699, 867
MflI RGATCY 2 cut(s) 144, 867
MhlI GDGCHC 3 cut(s) 248, 1466, 1614
MlyI GAGTC 2 cut(s) 1254, 1516
MmeI TCCRAC 2 cut(s) 169, 1390
MseI TTAA 4 cut(s) 770, 1175, 1478, 1622
MslI CAYNNNNRTG 4 cut(s) 164, 394, 1088, 1490
MspCI CTTAAG 1 cut(s) 1477
MspI CCGG 1 cut(s) 1442
MspR9I CCNGG 1 cut(s) 556
MvaI CCWGG 1 cut(s) 556
MwoI GCNNNNNNNGC 5 cut(s) 218, 323, 1286, 1394, 1609
NcoI CCATGG 1 cut(s) 953
NdeI CATATG 1 cut(s) 779
NdeII GATC 5 cut(s) 144, 532, 573, 699, 867
NlaIV GGNNCC 3 cut(s) 1108, 1440, 1780
NmuCI GTSAC 3 cut(s) 229, 1519, 1537
NspI RCATGY 1 cut(s) 1029
PagI TCATGA 2 cut(s) 421, 1089
PasI CCCWGGG 1 cut(s) 555
PciI ACATGT 1 cut(s) 1025
PciSI GCTCTTC 1 cut(s) 1541
PfeI GAWTC 3 cut(s) 70, 169, 744
PkrI GCNGC 9 cut(s) 109, 469, 764, 907, 1279, 1291, 1294, 1602, 1677
PleI GAGTC 2 cut(s) 1254, 1516
PpsI GAGTC 2 cut(s) 1254, 1516
PpuMI RGGWCCY 1 cut(s) 1778
PscI ACATGT 1 cut(s) 1025
Psp5II RGGWCCY 1 cut(s) 1778
Psp6I CCWGG 1 cut(s) 554
PspGI CCWGG 1 cut(s) 554
PspN4I GGNNCC 3 cut(s) 1108, 1440, 1780
PspPI GGNCC 1 cut(s) 1778
PspPPI RGGWCCY 1 cut(s) 1778
PstI CTGCAG 2 cut(s) 112, 1294
PsuI RGATCY 2 cut(s) 144, 867
RsaI GTAC 3 cut(s) 305, 648, 1664
RsaNI GTAC 3 cut(s) 304, 647, 1663
RseI CAYNNNNRTG 4 cut(s) 164, 394, 1088, 1490
SalI GTCGAC 1 cut(s) 1021
SapI GCTCTTC 1 cut(s) 1541
SaqAI TTAA 4 cut(s) 770, 1175, 1478, 1622
SatI GCNGC 9 cut(s) 108, 468, 763, 906, 1278, 1290, 1293, 1601, 1676
Sau3AI GATC 5 cut(s) 144, 532, 573, 699, 867
Sau96I GGNCC 1 cut(s) 1778
SchI GAGTC 2 cut(s) 1254, 1516
ScrFI CCNGG 1 cut(s) 556
SduI GDGCHC 3 cut(s) 248, 1466, 1614
SfaNI GCATC 2 cut(s) 168, 277
SfcI CTRYAG 4 cut(s) 108, 406, 480, 1290
SinI GGWCC 1 cut(s) 1778
SmiMI CAYNNNNRTG 4 cut(s) 164, 394, 1088, 1490
SmlI CTYRAG 3 cut(s) 756, 887, 1477
SmoI CTYRAG 3 cut(s) 756, 887, 1477
SspMI CTAG 8 cut(s) 173, 281, 378, 488, 896, 914, 1379, 1783
StyD4I CCNGG 1 cut(s) 554
StyI CCWWGG 4 cut(s) 259, 268, 953, 1225
TaaI ACNGT 4 cut(s) 313, 775, 970, 1045
TaqI TCGA 2 cut(s) 1022, 1204
TatI WGTACW 2 cut(s) 646, 1662
TfiI GAWTC 3 cut(s) 70, 169, 744
Tru1I TTAA 4 cut(s) 770, 1175, 1478, 1622
Tru9I TTAA 4 cut(s) 770, 1175, 1478, 1622
TscAI CASTG 3 cut(s) 975, 1225, 1614
TseFI GTSAC 3 cut(s) 229, 1519, 1537
TseI GCWGC 9 cut(s) 107, 467, 762, 905, 1277, 1289, 1292, 1600, 1675
Tsp45I GTSAC 3 cut(s) 229, 1519, 1537
TspRI CASTG 3 cut(s) 975, 1225, 1614
Vha464I CTTAAG 1 cut(s) 1477
VpaK11BI GGWCC 1 cut(s) 1778
XapI RAATTY 4 cut(s) 193, 1319, 1421, 1624
XbaI TCTAGA 1 cut(s) 895
XceI RCATGY 1 cut(s) 1029
XmiI GTMKAC 2 cut(s) 1022, 1047
XspI CTAG 8 cut(s) 173, 281, 378, 488, 896, 914, 1379, 1783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.