No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01960 |
| fragaria_vesca | FvH4_6g53750 |
| prunus_persica | Prupe.3G308000_v2.0.a1 |
| pyrus_communis | pycom17g00770 |
| rosa_chinensis | RchiOBHm_Chr2g0175871 |
| rosa_laevigata | RLG00000022361 |
| rosa_multiflora | Rmu_sc0003282.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00076980 |
| rosa_rugosa | Rorug02G0588200 |
| rosa_samantha | Rh2AG667500 Rh2BG679000 Rh2CG641800 Rh2DG692500 |
| rosa_wichuraiana | Rw2G054710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 263 |
| AclI | AACGTT | 1 cut(s) | 328 |
| AgsI | TTSAA | 3 cut(s) | 323, 334, 341 |
| AjnI | CCWGG | 1 cut(s) | 114 |
| AluBI | AGCT | 4 cut(s) | 62, 134, 229, 337 |
| AluI | AGCT | 4 cut(s) | 62, 134, 229, 337 |
| AspLEI | GCGC | 1 cut(s) | 21 |
| AsuHPI | GGTGA | 1 cut(s) | 287 |
| BciT130I | CCWGG | 1 cut(s) | 116 |
| BclI | TGATCA | 1 cut(s) | 244 |
| BfmI | CTRYAG | 2 cut(s) | 210, 267 |
| BlpI | GCTNAGC | 1 cut(s) | 174 |
| Bme1390I | CCNGG | 1 cut(s) | 116 |
| BmrFI | CCNGG | 1 cut(s) | 116 |
| BmsI | GCATC | 1 cut(s) | 36 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 174 |
| BpuEI | CTTGAG | 1 cut(s) | 215 |
| Bse118I | RCCGGY | 1 cut(s) | 272 |
| BseBI | CCWGG | 1 cut(s) | 116 |
| BseMII | CTCAG | 1 cut(s) | 188 |
| BsiSI | CCGG | 1 cut(s) | 273 |
| Bsp143I | GATC | 1 cut(s) | 244 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 174 |
| BspACI | CCGC | 1 cut(s) | 263 |
| BspCNI | CTCAG | 1 cut(s) | 187 |
| BspHI | TCATGA | 1 cut(s) | 30 |
| BspMAI | CTGCAG | 2 cut(s) | 214, 271 |
| BsrFI | RCCGGY | 1 cut(s) | 272 |
| BssAI | RCCGGY | 1 cut(s) | 272 |
| BssMI | GATC | 1 cut(s) | 244 |
| Bst2UI | CCWGG | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 2 cut(s) | 190, 260 |
| BstC8I | GCNNGC | 2 cut(s) | 86, 227 |
| BstDEI | CTNAG | 1 cut(s) | 174 |
| BstHHI | GCGC | 1 cut(s) | 21 |
| BstKTI | GATC | 1 cut(s) | 247 |
| BstMBI | GATC | 1 cut(s) | 244 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 235, 269 |
| BstNI | CCWGG | 1 cut(s) | 116 |
| BstNSI | RCATGY | 1 cut(s) | 88 |
| BstSCI | CCNGG | 1 cut(s) | 114 |
| BstSFI | CTRYAG | 2 cut(s) | 210, 267 |
| Cac8I | GCNNGC | 2 cut(s) | 86, 227 |
| CciI | TCATGA | 1 cut(s) | 30 |
| CfoI | GCGC | 1 cut(s) | 21 |
| Cfr10I | RCCGGY | 1 cut(s) | 272 |
| CviAII | CATG | 3 cut(s) | 31, 85, 154 |
| DdeI | CTNAG | 1 cut(s) | 174 |
| DpnI | GATC | 1 cut(s) | 246 |
| DpnII | GATC | 1 cut(s) | 244 |
| Eco32I | GATATC | 1 cut(s) | 292 |
| EcoRII | CCWGG | 1 cut(s) | 114 |
| EcoRV | GATATC | 1 cut(s) | 292 |
| FaeI | CATG | 3 cut(s) | 34, 88, 157 |
| FaiI | YATR | 8 cut(s) | 32, 86, 93, 155, 162, 200, 249, 309 |
| FatI | CATG | 3 cut(s) | 30, 84, 153 |
| FbaI | TGATCA | 1 cut(s) | 244 |
| GlaI | GCGC | 1 cut(s) | 20 |
| HapII | CCGG | 1 cut(s) | 273 |
| HhaI | GCGC | 1 cut(s) | 21 |
| Hin1II | CATG | 3 cut(s) | 34, 88, 157 |
| Hin6I | GCGC | 1 cut(s) | 19 |
| HinP1I | GCGC | 1 cut(s) | 19 |
| HindIII | AAGCTT | 1 cut(s) | 335 |
| HinfI | GANTC | 3 cut(s) | 5, 10, 345 |
| HpaII | CCGG | 1 cut(s) | 273 |
| HphI | GGTGA | 1 cut(s) | 287 |
| Hpy188I | TCNGA | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 3 cut(s) | 31, 323, 354 |
| HpyAV | CCTTC | 2 cut(s) | 28, 81 |
| HpyCH4III | ACNGT | 2 cut(s) | 190, 260 |
| HpyCH4IV | ACGT | 1 cut(s) | 328 |
| HpyCH4V | TGCA | 4 cut(s) | 88, 212, 269, 302 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 235, 269 |
| HpyF3I | CTNAG | 1 cut(s) | 174 |
| HpySE526I | ACGT | 1 cut(s) | 328 |
| Hsp92II | CATG | 3 cut(s) | 34, 88, 157 |
| HspAI | GCGC | 1 cut(s) | 19 |
| Ksp22I | TGATCA | 1 cut(s) | 244 |
| Kzo9I | GATC | 1 cut(s) | 244 |
| LpnPI | CCDG | 5 cut(s) | 101, 128, 219, 239, 286 |
| LweI | GCATC | 1 cut(s) | 36 |
| MaeII | ACGT | 1 cut(s) | 328 |
| MalI | GATC | 1 cut(s) | 246 |
| MboI | GATC | 1 cut(s) | 244 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 1 cut(s) | 17 |
| MseI | TTAA | 1 cut(s) | 105 |
| MslI | CAYNNNNRTG | 1 cut(s) | 258 |
| MspA1I | CMGCKG | 1 cut(s) | 134 |
| MspI | CCGG | 1 cut(s) | 273 |
| MspR9I | CCNGG | 1 cut(s) | 116 |
| MvaI | CCWGG | 1 cut(s) | 116 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 235, 269 |
| NdeII | GATC | 1 cut(s) | 244 |
| NlaIII | CATG | 3 cut(s) | 34, 88, 157 |
| NmeAIII | GCCGAG | 1 cut(s) | 135 |
| NspI | RCATGY | 1 cut(s) | 88 |
| PaeI | GCATGC | 1 cut(s) | 88 |
| PagI | TCATGA | 1 cut(s) | 30 |
| PfeI | GAWTC | 2 cut(s) | 10, 345 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Psp1406I | AACGTT | 1 cut(s) | 328 |
| Psp6I | CCWGG | 1 cut(s) | 114 |
| PspGI | CCWGG | 1 cut(s) | 114 |
| PstI | CTGCAG | 2 cut(s) | 214, 271 |
| PvuII | CAGCTG | 1 cut(s) | 134 |
| RseI | CAYNNNNRTG | 1 cut(s) | 258 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| Sau3AI | GATC | 1 cut(s) | 244 |
| SchI | GAGTC | 1 cut(s) | 14 |
| ScrFI | CCNGG | 1 cut(s) | 116 |
| SetI | ASST | 9 cut(s) | 28, 64, 73, 105, 136, 231, 308, 331, 339 |
| SfaNI | GCATC | 1 cut(s) | 36 |
| SfcI | CTRYAG | 2 cut(s) | 210, 267 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 258 |
| SmlI | CTYRAG | 1 cut(s) | 230 |
| SmoI | CTYRAG | 1 cut(s) | 230 |
| SphI | GCATGC | 1 cut(s) | 88 |
| SsiI | CCGC | 1 cut(s) | 263 |
| StyD4I | CCNGG | 1 cut(s) | 114 |
| TaaI | ACNGT | 2 cut(s) | 190, 260 |
| TaiI | ACGT | 1 cut(s) | 331 |
| TaqI | TCGA | 1 cut(s) | 8 |
| TauI | GCSGC | 1 cut(s) | 266 |
| TfiI | GAWTC | 2 cut(s) | 10, 345 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TspDTI | ATGAA | 5 cut(s) | 19, 47, 142, 183, 303 |
| XceI | RCATGY | 1 cut(s) | 88 |