Domain of unknown function (DUF2431)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g00200 |
| malus_domestica | MD10G1341000.v1.1 |
| prunus_persica | Prupe.4G002200_v2.0.a1 |
| pyrus_communis | pycom10g29060 |
| rosa_chinensis | RchiOBHm_Chr5g0000261 |
| rosa_laevigata | RLG00000030854 |
| rosa_multiflora | Rmu_sc0043092.1_g000001 Rmu_ssc0000385.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00075840 |
| rosa_rugosa | Rorug04G0382900 |
| rosa_samantha | Rh5AG001900 Rh5BG003300 Rh5CG002200 Rh5DG002200 |
| rosa_wichuraiana | Rw5G000240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 374 |
| Acc65I | GGTACC | 1 cut(s) | 647 |
| AccB1I | GGYRCC | 1 cut(s) | 647 |
| AccI | GTMKAC | 1 cut(s) | 378 |
| AciI | CCGC | 3 cut(s) | 202, 604, 707 |
| AclWI | GGATC | 2 cut(s) | 202, 424 |
| AcyI | GRCGYC | 1 cut(s) | 321 |
| AfaI | GTAC | 2 cut(s) | 254, 649 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 28, 208, 395 |
| AgsI | TTSAA | 3 cut(s) | 287, 439, 584 |
| AjnI | CCWGG | 1 cut(s) | 231 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 431, 463 |
| AluBI | AGCT | 2 cut(s) | 283, 420 |
| AluI | AGCT | 2 cut(s) | 283, 420 |
| Alw26I | GTCTC | 1 cut(s) | 150 |
| AlwI | GGATC | 2 cut(s) | 202, 424 |
| ApeKI | GCWGC | 2 cut(s) | 577, 703 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 458 |
| Asp718I | GGTACC | 1 cut(s) | 647 |
| AsuC2I | CCSGG | 2 cut(s) | 410, 621 |
| AsuHPI | GGTGA | 1 cut(s) | 463 |
| BanI | GGYRCC | 1 cut(s) | 647 |
| BanII | GRGCYC | 1 cut(s) | 643 |
| BbvCI | CCTCAGC | 1 cut(s) | 350 |
| BbvI | GCAGC | 2 cut(s) | 564, 690 |
| BciT130I | CCWGG | 1 cut(s) | 233 |
| BclI | TGATCA | 2 cut(s) | 67, 73 |
| BcnI | CCSGG | 2 cut(s) | 410, 621 |
| BcoDI | GTCTC | 1 cut(s) | 150 |
| BfmI | CTRYAG | 1 cut(s) | 464 |
| BisI | GCNGC | 3 cut(s) | 578, 704, 707 |
| BlsI | GCNGC | 3 cut(s) | 579, 705, 708 |
| Bme1390I | CCNGG | 3 cut(s) | 233, 410, 621 |
| BmiI | GGNNCC | 1 cut(s) | 649 |
| BmrFI | CCNGG | 3 cut(s) | 233, 410, 621 |
| BmsI | GCATC | 2 cut(s) | 287, 649 |
| Bpu10I | CCTNAGC | 1 cut(s) | 350 |
| BpuMI | CCSGG | 2 cut(s) | 410, 621 |
| BsaBI | GATNNNNATC | 1 cut(s) | 72 |
| BsaHI | GRCGYC | 1 cut(s) | 321 |
| BsaJI | CCNNGG | 3 cut(s) | 231, 643, 673 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 28, 208, 395 |
| Bse1I | ACTGG | 1 cut(s) | 433 |
| Bse8I | GATNNNNATC | 1 cut(s) | 72 |
| BseBI | CCWGG | 1 cut(s) | 233 |
| BseDI | CCNNGG | 3 cut(s) | 231, 643, 673 |
| BseGI | GGATG | 2 cut(s) | 302, 529 |
| BseJI | GATNNNNATC | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 28, 208, 395 |
| BseMII | CTCAG | 3 cut(s) | 364, 371, 476 |
| BseNI | ACTGG | 1 cut(s) | 433 |
| BseRI | GAGGAG | 1 cut(s) | 251 |
| BseXI | GCAGC | 2 cut(s) | 564, 690 |
| BshNI | GGYRCC | 1 cut(s) | 647 |
| BsiSI | CCGG | 2 cut(s) | 409, 621 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 28, 208, 395 |
| BsmAI | GTCTC | 1 cut(s) | 150 |
| BsmI | GAATGC | 2 cut(s) | 117, 475 |
| Bsp1286I | GDGCHC | 1 cut(s) | 643 |
| Bsp143I | GATC | 4 cut(s) | 67, 73, 194, 429 |
| Bsp19I | CCATGG | 1 cut(s) | 643 |
| BspACI | CCGC | 3 cut(s) | 202, 604, 707 |
| BspCNI | CTCAG | 3 cut(s) | 363, 370, 477 |
| BspHI | TCATGA | 2 cut(s) | 70, 76 |
| BspLI | GGNNCC | 1 cut(s) | 649 |
| BspMAI | CTGCAG | 1 cut(s) | 468 |
| BspPI | GGATC | 2 cut(s) | 202, 424 |
| BspT107I | GGYRCC | 1 cut(s) | 647 |
| BsrI | ACTGG | 1 cut(s) | 433 |
| BssECI | CCNNGG | 3 cut(s) | 231, 643, 673 |
| BssMI | GATC | 4 cut(s) | 67, 73, 194, 429 |
| BssNI | GRCGYC | 1 cut(s) | 321 |
| BssT1I | CCWWGG | 2 cut(s) | 643, 673 |
| Bst2UI | CCWGG | 1 cut(s) | 233 |
| Bst4CI | ACNGT | 1 cut(s) | 257 |
| Bst6I | CTCTTC | 3 cut(s) | 6, 93, 410 |
| BstACI | GRCGYC | 1 cut(s) | 321 |
| BstC8I | GCNNGC | 1 cut(s) | 202 |
| BstDEI | CTNAG | 3 cut(s) | 350, 357, 485 |
| BstDSI | CCRYGG | 1 cut(s) | 643 |
| BstF5I | GGATG | 2 cut(s) | 302, 529 |
| BstKTI | GATC | 4 cut(s) | 70, 76, 197, 432 |
| BstMAI | GTCTC | 1 cut(s) | 150 |
| BstMBI | GATC | 4 cut(s) | 67, 73, 194, 429 |
| BstNI | CCWGG | 1 cut(s) | 233 |
| BstSCI | CCNGG | 3 cut(s) | 231, 408, 619 |
| BstSFI | CTRYAG | 1 cut(s) | 464 |
| BstV1I | GCAGC | 2 cut(s) | 564, 690 |
| BstX2I | RGATCY | 2 cut(s) | 194, 429 |
| BstYI | RGATCY | 2 cut(s) | 194, 429 |
| BtgI | CCRYGG | 1 cut(s) | 643 |
| BtsCI | GGATG | 2 cut(s) | 302, 529 |
| Cac8I | GCNNGC | 1 cut(s) | 202 |
| CciI | TCATGA | 2 cut(s) | 70, 76 |
| CseI | GACGC | 1 cut(s) | 329 |
| Csp6I | GTAC | 2 cut(s) | 253, 648 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 172, 207 |
| CviAII | CATG | 5 cut(s) | 71, 77, 208, 392, 644 |
| CviJI | RGCY | 8 cut(s) | 182, 215, 283, 399, 420, 577, 641, 703 |
| CviKI_1 | RGCY | 8 cut(s) | 182, 215, 283, 399, 420, 577, 641, 703 |
| CviQI | GTAC | 2 cut(s) | 253, 648 |
| DdeI | CTNAG | 3 cut(s) | 350, 357, 485 |
| DpnI | GATC | 4 cut(s) | 69, 75, 196, 431 |
| DpnII | GATC | 4 cut(s) | 67, 73, 194, 429 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 374 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 374 |
| Eam1104I | CTCTTC | 3 cut(s) | 6, 93, 410 |
| EarI | CTCTTC | 3 cut(s) | 6, 93, 410 |
| Eco130I | CCWWGG | 2 cut(s) | 643, 673 |
| Eco24I | GRGCYC | 1 cut(s) | 643 |
| EcoRII | CCWGG | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 2 cut(s) | 643, 673 |
| EcoT22I | ATGCAT | 1 cut(s) | 302 |
| EcoT38I | GRGCYC | 1 cut(s) | 643 |
| ErhI | CCWWGG | 2 cut(s) | 643, 673 |
| FaeI | CATG | 5 cut(s) | 74, 80, 211, 395, 647 |
| FaiI | YATR | 9 cut(s) | 72, 78, 132, 209, 302, 393, 510, 512, 645 |
| FatI | CATG | 5 cut(s) | 70, 76, 207, 391, 643 |
| FauI | CCCGC | 1 cut(s) | 209 |
| FbaI | TGATCA | 2 cut(s) | 67, 73 |
| FblI | GTMKAC | 1 cut(s) | 378 |
| Fnu4HI | GCNGC | 3 cut(s) | 578, 704, 707 |
| FokI | GGATG | 2 cut(s) | 309, 516 |
| FriOI | GRGCYC | 1 cut(s) | 643 |
| Fsp4HI | GCNGC | 3 cut(s) | 578, 704, 707 |
| GluI | GCNGC | 3 cut(s) | 578, 704, 707 |
| HapII | CCGG | 2 cut(s) | 409, 621 |
| HgaI | GACGC | 1 cut(s) | 329 |
| Hin1I | GRCGYC | 1 cut(s) | 321 |
| Hin1II | CATG | 5 cut(s) | 74, 80, 211, 395, 647 |
| HincII | GTYRAC | 1 cut(s) | 338 |
| HindII | GTYRAC | 1 cut(s) | 338 |
| HinfI | GANTC | 4 cut(s) | 32, 227, 334, 505 |
| HpaII | CCGG | 2 cut(s) | 409, 621 |
| HphI | GGTGA | 1 cut(s) | 463 |
| Hpy166II | GTNNAC | 3 cut(s) | 319, 338, 379 |
| Hpy188I | TCNGA | 2 cut(s) | 360, 658 |
| Hpy188III | TCNNGA | 3 cut(s) | 71, 77, 224 |
| Hpy8I | GTNNAC | 3 cut(s) | 319, 338, 379 |
| Hpy99I | CGWCG | 1 cut(s) | 44 |
| HpyAV | CCTTC | 6 cut(s) | 86, 146, 175, 448, 518, 610 |
| HpyCH4III | ACNGT | 1 cut(s) | 257 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 5 cut(s) | 115, 263, 300, 466, 684 |
| HpyF3I | CTNAG | 3 cut(s) | 350, 357, 485 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| Hsp92I | GRCGYC | 1 cut(s) | 321 |
| Hsp92II | CATG | 5 cut(s) | 74, 80, 211, 395, 647 |
| KpnI | GGTACC | 1 cut(s) | 651 |
| Ksp22I | TGATCA | 2 cut(s) | 67, 73 |
| Kzo9I | GATC | 4 cut(s) | 67, 73, 194, 429 |
| LmnI | GCTCC | 1 cut(s) | 280 |
| Lsp1109I | GCAGC | 2 cut(s) | 564, 690 |
| LweI | GCATC | 2 cut(s) | 287, 649 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MaeIII | GTNAC | 1 cut(s) | 623 |
| MalI | GATC | 4 cut(s) | 69, 75, 196, 431 |
| MboI | GATC | 4 cut(s) | 67, 73, 194, 429 |
| MboII | GAAGA | 9 cut(s) | 23, 65, 68, 71, 74, 110, 299, 337, 397 |
| MflI | RGATCY | 2 cut(s) | 194, 429 |
| MhlI | GDGCHC | 1 cut(s) | 643 |
| MlyI | GAGTC | 1 cut(s) | 343 |
| Mph1103I | ATGCAT | 1 cut(s) | 302 |
| MroXI | GAANNNNTTC | 1 cut(s) | 458 |
| MseI | TTAA | 1 cut(s) | 715 |
| MslI | CAYNNNNRTG | 2 cut(s) | 75, 81 |
| MspI | CCGG | 2 cut(s) | 409, 621 |
| MspR9I | CCNGG | 3 cut(s) | 233, 410, 621 |
| Mva1269I | GAATGC | 2 cut(s) | 117, 475 |
| MvaI | CCWGG | 1 cut(s) | 233 |
| NciI | CCSGG | 2 cut(s) | 410, 621 |
| NcoI | CCATGG | 1 cut(s) | 643 |
| NdeII | GATC | 4 cut(s) | 67, 73, 194, 429 |
| NlaIII | CATG | 5 cut(s) | 74, 80, 211, 395, 647 |
| NlaIV | GGNNCC | 1 cut(s) | 649 |
| NsiI | ATGCAT | 1 cut(s) | 302 |
| PagI | TCATGA | 2 cut(s) | 70, 76 |
| PctI | GAATGC | 2 cut(s) | 117, 475 |
| PdmI | GAANNNNTTC | 1 cut(s) | 458 |
| PfeI | GAWTC | 3 cut(s) | 32, 227, 505 |
| PfoI | TCCNGGA | 1 cut(s) | 408 |
| PkrI | GCNGC | 3 cut(s) | 579, 705, 708 |
| PleI | GAGTC | 1 cut(s) | 342 |
| PpsI | GAGTC | 1 cut(s) | 342 |
| Psp6I | CCWGG | 1 cut(s) | 231 |
| PspGI | CCWGG | 1 cut(s) | 231 |
| PspN4I | GGNNCC | 1 cut(s) | 649 |
| PstI | CTGCAG | 1 cut(s) | 468 |
| PsuI | RGATCY | 2 cut(s) | 194, 429 |
| RsaI | GTAC | 2 cut(s) | 254, 649 |
| RsaNI | GTAC | 2 cut(s) | 253, 648 |
| RseI | CAYNNNNRTG | 2 cut(s) | 75, 81 |
| SaqAI | TTAA | 1 cut(s) | 715 |
| SatI | GCNGC | 3 cut(s) | 578, 704, 707 |
| Sau3AI | GATC | 4 cut(s) | 67, 73, 194, 429 |
| SchI | GAGTC | 1 cut(s) | 343 |
| ScrFI | CCNGG | 3 cut(s) | 233, 410, 621 |
| SduI | GDGCHC | 1 cut(s) | 643 |
| SetI | ASST | 7 cut(s) | 42, 285, 365, 422, 449, 529, 675 |
| SfaNI | GCATC | 2 cut(s) | 287, 649 |
| SfcI | CTRYAG | 1 cut(s) | 464 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 75, 81 |
| SsiI | CCGC | 3 cut(s) | 202, 604, 707 |
| StyD4I | CCNGG | 3 cut(s) | 231, 408, 619 |
| StyI | CCWWGG | 2 cut(s) | 643, 673 |
| TaaI | ACNGT | 1 cut(s) | 257 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TaqI | TCGA | 3 cut(s) | 42, 125, 225 |
| TatI | WGTACW | 1 cut(s) | 252 |
| TauI | GCSGC | 1 cut(s) | 709 |
| TfiI | GAWTC | 3 cut(s) | 32, 227, 505 |
| Tru1I | TTAA | 1 cut(s) | 715 |
| Tru9I | TTAA | 1 cut(s) | 715 |
| TseI | GCWGC | 2 cut(s) | 577, 703 |
| TspDTI | ATGAA | 3 cut(s) | 66, 105, 497 |
| TspGWI | ACGGA | 1 cut(s) | 327 |
| XmiI | GTMKAC | 1 cut(s) | 378 |
| XmnI | GAANNNNTTC | 1 cut(s) | 458 |
| Zsp2I | ATGCAT | 1 cut(s) | 302 |