Prupe.4G036400_v2.0.a1

Calmodulin binding protein-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
1722704 .. 1727684
4981 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G036400.2

Sequence Viewer

Length: 1917 bp
ATGCAGACAAGGTACATGGAGAGATCGAATAGTATGGCGAGGGAGAAGCGAGGTTTGGATTCGTCTTCAGCTGAAGAAGGCCAGCCAGATAGGAAACGGCCTGCTCTAGCCAGTGTAATTGTTGAAGCTCTCAAGGTGGATAGTCTGCAAAAGCTTTGCTCGTCATTGGAGCCGATTCTACGTAGAGTTGTTAGTGAAGAGGTGGAGCGTGCTTTGGCAAAATTAGGCTCTGCCAAACTTACTGGGAGGTCTTCTCCTAAACAAATTGGAGGGCCTGATGGAAGACACTTGCAGCTGCACTTTAGGTCTAGGTTGTCTCTTCCTCTCTTTACTGGTGGAAAAGTAGAAGGGGAGTGGGGTTCTGCAATCCCTATTGTCTTGATTGATGCAAATACAAAGCACGTTGTGACATCAGGCCCAGAGTCTGTGGTGAAACTAGATGTTGTTGTGCTTGAAGGTGATTTTAACAATGAGGATGATGATAACTGGACCCAAGAAGAATTTGAGAGCCATGTGGTGAAAGAGCGTGAAGGAAAGAGGCCACTTCTGACTGGGGATCTGCAAGTGACTCTGAAGGAAGGTGTAGGAACACTAGGGGAGCTAACATTTACTGATAACTCTAGCTGGATTAGGAGCAGAAAATTCAGGCTAGGACTGAAAGTTGCCTCAGGCTATTGCGAGGGCATTCGTATACGGGAAGCAAAAACAGATGCCTTTACTGTTAAGGATCACCGTGGGGAATTATACAAGAAACACTACCCACCTGCTTTAAATGATGAGGTCTGGAGATTGGAGAAAATTGGAAAAGATGGCTCCTTCCATAAGAGACTGAATAAAGCTGGAATTGTTACAGTTGAAGACTTCCTACGACTTGTGGTTAGAGACTCGCAGAGATTGCGGAATATTCTTGGAAGTGGCATGTCGAATAAGATGTGGGATGTCCTTATACAGCATGCAAAAACCTGTCTTCTAGTTGGGAAACTCTATGTCTACTATCCTGATGATGCAAGGAATGTTGGCGTTGTTTTTAACGATATCTACGAGTTGAGCGGCTTAATTACCAATGAACAATTTTACTCTGCCGATTCACTCTCGGACAGTCAGAAGGTCTATGTGGACGGTTTGGTGAAGAAGGCATATGACAACTGGATGCATGTGATGGAGTATGATGGAAAGTCTCTTTTAAACTTTAAGCAGCAGAAGAGTCCAGAGGCTTCTCTACCTGAGGTTCCATTGGCCACACAAGATTATCCAAACTCATTTGATCAATTCACCCTACCTAGCCTACCAATTTCAGTTTCTGCAGAACAGCCTACTATGGACTCGGGCCTAAGTGTAGGAGGTTATAATGATGGCATGGCTACCAGATTCTCAACACAGAACGTAAATCTCAGTGCTCCCATTCAGCTTGATGGCTTGGCATTTCCTCTACAGAATCAGTTGCCTAGCACTTCAAACCAGGCTCATTTTCAAAGAAATGAAAACATGCTTGCCCTCGGTCCCCCACAGTCATCCACATCAGGGTTCCAGAATATTGGTACATCCAATCTTACTTCTTATAGGGGAGTTGAGGACCTCTTCCCAGAGGAAGAAATACGTATGAGGAGCCATGAGATGCTTGAAAATGAAGATATGCAGCATCTACTTCGTATCTTTAACATGGGTGGTCAAGGTCACGGTCATGGTCACGGTTATGGACATGCCTCCATGAACATTACTGAAGACAATTATCCTTATTCCACAGCATACATCCCCACTCCACCAGTGAACTACAGTACTGATGATGATCACAGTCGTTCATCTGGAAAAGCTGTTGTTGGCTGGCTCAAGCTCAAGGCAGCCCTTAGATGGGGCATATTCATCAGAAAGAAGGCTGCTGAGAGACGGGCACAGCTAGTTGAGTTGGATGATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

639

Amino Acids

71.31

Weight (kDa)

6.14

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1347
AarI CACCTGC 1 cut(s) 772
Acc36I ACCTGC 1 cut(s) 772
AccBSI CCGCTC 1 cut(s) 1050
AccI GTMKAC 2 cut(s) 691, 990
AciI CCGC 2 cut(s) 898, 1050
AclWI GGATC 2 cut(s) 564, 735
AcoI YGGCCR 1 cut(s) 1236
AcsI RAATTY 2 cut(s) 500, 641
AcuI CTGAAG 4 cut(s) 51, 93, 593, 1740
AdeI CACNNNGTG 1 cut(s) 406
AfaI GTAC 3 cut(s) 14, 1540, 1777
AfiI CCNNNNNNNGG 3 cut(s) 1521, 1848, 1849
AgsI TTSAA 6 cut(s) 125, 455, 857, 1455, 1472, 1622
AjnI CCWGG 1 cut(s) 1458
AjuI GAANNNNNNNTTGG 4 cut(s) 38, 70, 1282, 1314
Alw21I GWGCWC 1 cut(s) 1399
Alw26I GTCTC 5 cut(s) 321, 820, 876, 1182, 1876
AlwI GGATC 2 cut(s) 564, 735
AlwNI CAGNNNCTG 2 cut(s) 425, 1301
Ama87I CYCGRG 1 cut(s) 1324
AoxI GGCC 7 cut(s) 79, 98, 272, 415, 539, 1236, 1327
ApeKI GCWGC 6 cut(s) 292, 295, 1195, 1636, 1838, 1874
ApoI RAATTY 2 cut(s) 500, 641
AspS9I GGNCC 6 cut(s) 272, 416, 489, 1327, 1499, 1573
AsuHPI GGTGA 6 cut(s) 442, 470, 529, 722, 1138, 1264
AvaI CYCGRG 1 cut(s) 1324
AvaII GGWCC 3 cut(s) 489, 1499, 1573
AxyI CCTNAGG 2 cut(s) 667, 1224
BaeGI GKGCMC 1 cut(s) 1891
BalI TGGCCA 1 cut(s) 1238
BarI GAAGNNNNNNTAC 2 cut(s) 849, 881
BbsI GAAGAC 6 cut(s) 57, 243, 289, 864, 959, 1728
Bbv12I GWGCWC 1 cut(s) 1399
BbvI GCAGC 6 cut(s) 282, 304, 1207, 1648, 1850, 1861
BccI CCATC 7 cut(s) 272, 803, 1153, 1163, 1346, 1406, 1842
BceAI ACGGC 1 cut(s) 113
BcgI CGANNNNNNTGC 2 cut(s) 1628, 1662
BciT130I CCWGG 1 cut(s) 1460
BclI TGATCA 2 cut(s) 1264, 1786
BcoDI GTCTC 5 cut(s) 321, 820, 876, 1182, 1876
BfmI CTRYAG 3 cut(s) 1302, 1430, 1771
BfuAI ACCTGC 1 cut(s) 772
BisI GCNGC 7 cut(s) 293, 296, 1051, 1196, 1637, 1839, 1875
BlsI GCNGC 7 cut(s) 294, 297, 1052, 1197, 1638, 1840, 1876
BmcAI AGTACT 1 cut(s) 1777
Bme1390I CCNGG 1 cut(s) 1460
Bme18I GGWCC 3 cut(s) 489, 1499, 1573
BmeT110I CYCGRG 1 cut(s) 1324
BmgT120I GGNCC 6 cut(s) 272, 416, 489, 1327, 1499, 1573
BmiI GGNNCC 7 cut(s) 171, 491, 814, 1230, 1501, 1526, 1607
BmrFI CCNGG 1 cut(s) 1460
BmrI ACTGGG 2 cut(s) 252, 561
BmsI GCATC 6 cut(s) 376, 700, 994, 1140, 1605, 1648
BmuI ACTGGG 2 cut(s) 252, 561
BpiI GAAGAC 6 cut(s) 57, 243, 289, 864, 959, 1728
BplI GAGNNNNNCTC 2 cut(s) 238, 270
BpmI CTGGAG 1 cut(s) 805
BpuEI CTTGAG 3 cut(s) 116, 1811, 1817
BsaAI YACGTR 2 cut(s) 182, 1598
BsaBI GATNNNNATC 1 cut(s) 1785
BsaJI CCNNGG 2 cut(s) 733, 1495
Bsc4I CCNNNNNNNGG 3 cut(s) 1521, 1848, 1849
Bse1I ACTGG 7 cut(s) 111, 247, 337, 491, 556, 1151, 1763
Bse21I CCTNAGG 2 cut(s) 667, 1224
Bse8I GATNNNNATC 1 cut(s) 1785
BseBI CCWGG 1 cut(s) 1460
BseDI CCNNGG 2 cut(s) 733, 1495
BseGI GGATG 7 cut(s) 481, 943, 1155, 1511, 1541, 1749, 1912
BseJI GATNNNNATC 1 cut(s) 1785
BseLI CCNNNNNNNGG 3 cut(s) 1521, 1848, 1849
BseMII CTCAG 4 cut(s) 681, 1215, 1405, 1869
BseNI ACTGG 7 cut(s) 111, 247, 337, 491, 556, 1151, 1763
BseRI GAGGAG 1 cut(s) 1618
BseSI GKGCMC 1 cut(s) 1891
BseXI GCAGC 6 cut(s) 282, 304, 1207, 1648, 1850, 1861
BsgI GTGCAG 1 cut(s) 281
BshFI GGCC 7 cut(s) 81, 100, 274, 417, 541, 1238, 1329
BsiHKAI GWGCWC 1 cut(s) 1399
BsiHKCI CYCGRG 1 cut(s) 1324
BslFI GGGAC 1 cut(s) 1485
BslI CCNNNNNNNGG 3 cut(s) 1521, 1848, 1849
BsmAI GTCTC 5 cut(s) 321, 820, 876, 1182, 1876
BsmBI CGTCTC 1 cut(s) 1876
BsmFI GGGAC 1 cut(s) 1485
BsmI GAATGC 1 cut(s) 684
BsnI GGCC 7 cut(s) 81, 100, 274, 417, 541, 1238, 1329
BsoBI CYCGRG 1 cut(s) 1324
Bsp1286I GDGCHC 2 cut(s) 1399, 1891
Bsp143I GATC 5 cut(s) 23, 556, 727, 1264, 1786
BspACI CCGC 2 cut(s) 898, 1050
BspANI GGCC 7 cut(s) 81, 100, 274, 417, 541, 1238, 1329
BspCNI CTCAG 4 cut(s) 680, 1216, 1404, 1870
BspLI GGNNCC 7 cut(s) 171, 491, 814, 1230, 1501, 1526, 1607
BspMAI CTGCAG 1 cut(s) 1306
BspMI ACCTGC 1 cut(s) 772
BspPI GGATC 2 cut(s) 564, 735
BsrBI CCGCTC 1 cut(s) 1050
BsrI ACTGG 7 cut(s) 111, 247, 337, 491, 556, 1151, 1763
BssECI CCNNGG 2 cut(s) 733, 1495
BssMI GATC 5 cut(s) 23, 556, 727, 1264, 1786
BssNAI GTATAC 1 cut(s) 692
Bst1107I GTATAC 1 cut(s) 692
Bst2UI CCWGG 1 cut(s) 1460
Bst6I CTCTTC 4 cut(s) 192, 324, 1196, 1583
BstAPI GCANNNNNTGC 1 cut(s) 895
BstBAI YACGTR 2 cut(s) 182, 1598
BstC8I GCNNGC 6 cut(s) 83, 102, 210, 954, 1491, 1823
BstDEI CTNAG 6 cut(s) 667, 1224, 1331, 1391, 1844, 1878
BstDSI CCRYGG 1 cut(s) 733
BstF5I GGATG 7 cut(s) 481, 943, 1155, 1511, 1541, 1749, 1912
BstKTI GATC 5 cut(s) 26, 559, 730, 1267, 1789
BstMAI GTCTC 5 cut(s) 321, 820, 876, 1182, 1876
BstMBI GATC 5 cut(s) 23, 556, 727, 1264, 1786
BstMWI GCNNNNNNNGC 1 cut(s) 895
BstNI CCWGG 1 cut(s) 1460
BstNSI RCATGY 5 cut(s) 922, 956, 1157, 1489, 1703
BstSCI CCNGG 1 cut(s) 1458
BstSFI CTRYAG 3 cut(s) 1302, 1430, 1771
BstSLI GKGCMC 1 cut(s) 1891
BstSNI TACGTA 2 cut(s) 182, 1598
BstV1I GCAGC 6 cut(s) 282, 304, 1207, 1648, 1850, 1861
BstV2I GAAGAC 6 cut(s) 57, 243, 289, 864, 959, 1728
BstX2I RGATCY 1 cut(s) 556
BstXI CCANNNNNNTGG 1 cut(s) 1535
BstYI RGATCY 1 cut(s) 556
BstZ17I GTATAC 1 cut(s) 692
Bsu36I CCTNAGG 2 cut(s) 667, 1224
BsuRI GGCC 7 cut(s) 81, 100, 274, 417, 541, 1238, 1329
BtgI CCRYGG 1 cut(s) 733
BtsCI GGATG 7 cut(s) 481, 943, 1155, 1511, 1541, 1749, 1912
BtsIMutI CAGTG 3 cut(s) 118, 1399, 1770
BveI ACCTGC 1 cut(s) 772
Cac8I GCNNGC 6 cut(s) 83, 102, 210, 954, 1491, 1823
CaiI CAGNNNCTG 2 cut(s) 425, 1301
Cfr13I GGNCC 6 cut(s) 272, 416, 489, 1327, 1499, 1573
Csp6I GTAC 3 cut(s) 13, 1539, 1776
CviQI GTAC 3 cut(s) 13, 1539, 1776
DdeI CTNAG 6 cut(s) 667, 1224, 1331, 1391, 1844, 1878
DpnI GATC 5 cut(s) 25, 558, 729, 1266, 1788
DpnII GATC 5 cut(s) 23, 556, 727, 1264, 1786
DraI TTTAAA 2 cut(s) 771, 1185
DraIII CACNNNGTG 1 cut(s) 406
EaeI YGGCCR 1 cut(s) 1236
Eam1104I CTCTTC 4 cut(s) 192, 324, 1196, 1583
EarI CTCTTC 4 cut(s) 192, 324, 1196, 1583
Eco105I TACGTA 2 cut(s) 182, 1598
Eco32I GATATC 1 cut(s) 1036
Eco47I GGWCC 3 cut(s) 489, 1499, 1573
Eco57I CTGAAG 4 cut(s) 51, 93, 593, 1740
Eco81I CCTNAGG 2 cut(s) 667, 1224
Eco88I CYCGRG 1 cut(s) 1324
EcoO109I RGGNCCY 2 cut(s) 272, 1573
EcoRII CCWGG 1 cut(s) 1458
EcoRV GATATC 1 cut(s) 1036
EcoT22I ATGCAT 1 cut(s) 1155
Esp3I CGTCTC 1 cut(s) 1876
FaqI GGGAC 1 cut(s) 1485
FauNDI CATATG 1 cut(s) 1138
FbaI TGATCA 2 cut(s) 1264, 1786
FblI GTMKAC 2 cut(s) 691, 990
Fnu4HI GCNGC 7 cut(s) 293, 296, 1051, 1196, 1637, 1839, 1875
FokI GGATG 6 cut(s) 488, 950, 1162, 1498, 1528, 1736
Fsp4HI GCNGC 7 cut(s) 293, 296, 1051, 1196, 1637, 1839, 1875
GluI GCNGC 7 cut(s) 293, 296, 1051, 1196, 1637, 1839, 1875
GsuI CTGGAG 1 cut(s) 805
HaeIII GGCC 7 cut(s) 81, 100, 274, 417, 541, 1238, 1329
HindIII AAGCTT 1 cut(s) 152
HphI GGTGA 6 cut(s) 442, 470, 529, 722, 1138, 1264
Hpy166II GTNNAC 4 cut(s) 692, 991, 1117, 1768
Hpy188I TCNGA 5 cut(s) 549, 573, 1096, 1104, 1865
Hpy188III TCNNGA 6 cut(s) 379, 784, 998, 1208, 1528, 1803
Hpy8I GTNNAC 4 cut(s) 692, 991, 1117, 1768
HpyCH4IV ACGT 4 cut(s) 181, 402, 1383, 1597
HpyF10VI GCNNNNNNNGC 1 cut(s) 895
HpyF3I CTNAG 6 cut(s) 667, 1224, 1331, 1391, 1844, 1878
HpySE526I ACGT 4 cut(s) 181, 402, 1383, 1597
Ksp22I TGATCA 2 cut(s) 1264, 1786
Kzo9I GATC 5 cut(s) 23, 556, 727, 1264, 1786
LmnI GCTCC 7 cut(s) 169, 205, 598, 633, 818, 1402, 1605
Lsp1109I GCAGC 6 cut(s) 282, 304, 1207, 1648, 1850, 1861
LweI GCATC 6 cut(s) 376, 700, 994, 1140, 1605, 1648
MaeII ACGT 4 cut(s) 181, 402, 1383, 1597
MaeIII GTNAC 5 cut(s) 406, 565, 847, 1673, 1685
MalI GATC 5 cut(s) 25, 558, 729, 1266, 1788
MbiI CCGCTC 1 cut(s) 1050
MboI GATC 5 cut(s) 23, 556, 727, 1264, 1786
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 2 cut(s) 1399, 1891
MlsI TGGCCA 1 cut(s) 1238
MluNI TGGCCA 1 cut(s) 1238
MlyI GAGTC 5 cut(s) 431, 562, 878, 1213, 1316
MmeI TCCRAC 1 cut(s) 1884
Mox20I TGGCCA 1 cut(s) 1238
Mph1103I ATGCAT 1 cut(s) 1155
MscI TGGCCA 1 cut(s) 1238
MseI TTAA 8 cut(s) 465, 723, 770, 1029, 1055, 1184, 1191, 1656
MslI CAYNNNNRTG 2 cut(s) 1680, 1692
Msp20I TGGCCA 1 cut(s) 1238
MspA1I CMGCKG 2 cut(s) 71, 295
MspR9I CCNGG 1 cut(s) 1460
Mva1269I GAATGC 1 cut(s) 684
MvaI CCWGG 1 cut(s) 1460
MwoI GCNNNNNNNGC 1 cut(s) 895
NdeI CATATG 1 cut(s) 1138
NdeII GATC 5 cut(s) 23, 556, 727, 1264, 1786
NlaIV GGNNCC 7 cut(s) 171, 491, 814, 1230, 1501, 1526, 1607
NmuCI GTSAC 4 cut(s) 406, 565, 1673, 1685
NsiI ATGCAT 1 cut(s) 1155
NspI RCATGY 5 cut(s) 922, 956, 1157, 1489, 1703
PaeI GCATGC 1 cut(s) 956
PaqCI CACCTGC 1 cut(s) 772
PcsI WCGNNNNNNNCGW 1 cut(s) 1038
PctI GAATGC 1 cut(s) 684
PfeI GAWTC 6 cut(s) 59, 175, 1085, 1368, 1435, 1910
PkrI GCNGC 7 cut(s) 294, 297, 1052, 1197, 1638, 1840, 1876
PleI GAGTC 5 cut(s) 430, 562, 878, 1212, 1316
PpsI GAGTC 5 cut(s) 430, 562, 878, 1212, 1316
Ppu21I YACGTR 2 cut(s) 182, 1598
PpuMI RGGWCCY 1 cut(s) 1573
PsiI TTATAA 1 cut(s) 1347
Psp5II RGGWCCY 1 cut(s) 1573
Psp6I CCWGG 1 cut(s) 1458
PspGI CCWGG 1 cut(s) 1458
PspN4I GGNNCC 7 cut(s) 171, 491, 814, 1230, 1501, 1526, 1607
PspPI GGNCC 6 cut(s) 272, 416, 489, 1327, 1499, 1573
PspPPI RGGWCCY 1 cut(s) 1573
PstI CTGCAG 1 cut(s) 1306
PstNI CAGNNNCTG 2 cut(s) 425, 1301
PsuI RGATCY 1 cut(s) 556
PvuII CAGCTG 2 cut(s) 71, 295
RsaI GTAC 3 cut(s) 14, 1540, 1777
RsaNI GTAC 3 cut(s) 13, 1539, 1776
RseI CAYNNNNRTG 2 cut(s) 1680, 1692
SaqAI TTAA 8 cut(s) 465, 723, 770, 1029, 1055, 1184, 1191, 1656
SatI GCNGC 7 cut(s) 293, 296, 1051, 1196, 1637, 1839, 1875
Sau3AI GATC 5 cut(s) 23, 556, 727, 1264, 1786
Sau96I GGNCC 6 cut(s) 272, 416, 489, 1327, 1499, 1573
ScaI AGTACT 1 cut(s) 1777
SchI GAGTC 5 cut(s) 431, 562, 878, 1213, 1316
ScrFI CCNGG 1 cut(s) 1460
SduI GDGCHC 2 cut(s) 1399, 1891
SfaNI GCATC 6 cut(s) 376, 700, 994, 1140, 1605, 1648
SfcI CTRYAG 3 cut(s) 1302, 1430, 1771
SinI GGWCC 3 cut(s) 489, 1499, 1573
SmiMI CAYNNNNRTG 2 cut(s) 1680, 1692
SmlI CTYRAG 3 cut(s) 131, 1826, 1832
SmoI CTYRAG 3 cut(s) 131, 1826, 1832
SnaBI TACGTA 2 cut(s) 182, 1598
SphI GCATGC 1 cut(s) 956
SsiI CCGC 2 cut(s) 898, 1050
SspI AATATT 2 cut(s) 904, 1534
StyD4I CCNGG 1 cut(s) 1458
TaiI ACGT 4 cut(s) 184, 405, 1386, 1600
TaqI TCGA 2 cut(s) 26, 923
TaqII GACCGA 1 cut(s) 1487
TatI WGTACW 1 cut(s) 1775
TauI GCSGC 1 cut(s) 1053
TfiI GAWTC 6 cut(s) 59, 175, 1085, 1368, 1435, 1910
Tru1I TTAA 8 cut(s) 465, 723, 770, 1029, 1055, 1184, 1191, 1656
Tru9I TTAA 8 cut(s) 465, 723, 770, 1029, 1055, 1184, 1191, 1656
TscAI CASTG 3 cut(s) 118, 1399, 1770
TseFI GTSAC 4 cut(s) 406, 565, 1673, 1685
TseI GCWGC 6 cut(s) 292, 295, 1195, 1636, 1838, 1874
Tsp45I GTSAC 4 cut(s) 406, 565, 1673, 1685
TspDTI ATGAA 7 cut(s) 1080, 1494, 1641, 1724, 1788, 1849, 1902
TspRI CASTG 3 cut(s) 118, 1399, 1770
VpaK11BI GGWCC 3 cut(s) 489, 1499, 1573
XapI RAATTY 2 cut(s) 500, 641
XceI RCATGY 5 cut(s) 922, 956, 1157, 1489, 1703
XmiI GTMKAC 2 cut(s) 691, 990
ZrmI AGTACT 1 cut(s) 1777
Zsp2I ATGCAT 1 cut(s) 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.