RchiOBHm_Chr5g0006541

Calmodulin binding protein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0011534
Physical Location & Seq
Reverse (-)
4035591 .. 4040291
4701 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28764

Sequence Viewer

Length: 1914 bp
ATGCAGACGAGGTACATGGAGAGATCGAATAGTATGGCCAGGGAGAAGCGGGGTCTGGATTCGGCCGCAGCTGAAGAAGGCCAGCCTGATAGGAAACGCCCAGCTCTAGCAAGTGTAATTGTTGAAGCTCTCAAGGTCGACAGTCTGCAAAAGCTTTGCTCCTCACTGGAGCCAATTCTACGCAGAGTTGTCAGTGAAGAGGTAGAGCGTGCTTTAGCAAAATTAGGCCCGGCTAAACTTACCGGAAGGTCGTCTCCTCCTAAACAAATTGAAGGACCTGATGGAAGAAACTTGCAGCTGCACTTCAGGTCCAAGTTGTCGCTTCCTCTCTTTACTGGTGGAAAAGTAGAAGGAGAGTGGGGTGCCGCAATCCCTATTGTGTTGATTGATGCAAATACACACTGTGTTGTCACATCAGGTCCAGAGTCAATGGTGAAACTAGATGTTATTGTTCTTGAAGGTGATTTTAACAATGAGGACGATGATAACTGGACTGAAGAAGAATTTGAGAGCCATGTGGTGAAAGAGCGTGAAGGAAAGAGGCCACTTCTCACTGGGGATCTTCAAGTGACACTGAAAGAAGGTGTAGGAACTCTAGGGGAGCTGACATTTACCGATAATTCAAGCTGGATTAGGAGCAGGAAGTTCAGGCTAGGATTGAAGGTTGCCTCAGGCTGTTGCGATGGAATTCGTATCCGTGAAGCAAAAACAGATGCCTTCACCGTTAAGGACCACCGTGGGGAATTATACAAGAAACACTACCCACCTGTGCTAACTGATGAGGTTTGGAGATTGGAGAAAATTGGAAAAGATGGGTCATTTCACAAGAGACTGAATAAGGCCGGAGTCTTTACTGTTGAAGACTTCCTACGACTTGTGAATAGAGACTCGCAGAGACTGCGGAATATTCTTGGGAGTGGCATGTCGAATAAGATGTGGGACGTCCTTATACAACATGCAAAGACCTGTCTTCTAGGTGGTAAACTCTATGTGTACTATCCTGAGGATGCAAGAAGTGTTGGTGTTGTTTTCAACAATATCTATGAGTTGAGTGGGTTAATCACCAATGAACAGTATATGTCCGCTGACTCTCTCTCAGACAGCCAGAAGGTCTATGTTGACGGTTTGGTGAAGAAGGCGTATGAAAACTGGATGCATGTTATGGAGTATGATGGAAAGTCTCTTCTAAACTTCAAGCAGCAGAAGGGTCCAGTTACCTCTCAACTTGAGGTTCCCATGGTTTCGCAGGAGTATACAAACTCATTTAACCAGCAGTTCACACTACCTAGCCTGCCAGTTCCTTCAGAGCAGAATATTATGGATCCTGGATTTATTGCGGGAGGTTATAATGATGGCATGGCAACCCGATTTTCAATACCTCCACAGAACGTAAATCTCAATCCTCCCGTTCAGTTTGATGGCTCTTCATTCCCTCTACAGAGTCAGTTGCCCAGCACTTCGCACCCACATGAAATCCAAAGAAGTGAAAATATGCGTGCCCTTGGTCCGCCACAATCATCCACATCAGGATTCCAGAATGTGGATACATCCAATCTTGCTTCTTTTAGGGGACTTGACTTTTTCCCAGAGGAAGAAATTCGTACGAGGAGCCATGAGATACTTGAACATGAAGATATGCAGCATCTACTTCGTATGTTTAGCATGGGTGGTCATGGTCAAGTTCACGGTCAGGGTGTCCATCCTTCCATAAATGCTACCGAAGACTATTCTTACGCCTCAGCATATATGCCCAGTCCATCTATAAACTACAATTTCGACGATGATCGCAGCCGTTCATCTGGTAAGGCTGTTGTTGGTTGGCTCAAACTTAAGGCAGCCCTTAGATGGGGCATATTCATTAGAAAGAAGGCTGCTGAGAGACGGGCACAACTGGTTGAGTTGGATGAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Calmodulin_bind

Protein Analysis

637

Amino Acids

71.42

Weight (kDa)

6.2

Isoelectric Point (pI)

55.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Calmodulin_bind PF07887 98 - 245 3.6e-62 Calmodulin binding protein-like N-terminal domain
Calmod_bind_M PF20451 258 - 323 2.4e-32 Calmodulin binding protein central domain
Calmod_bind_C PF20452 328 - 390 3.3e-23 Calmodulin binding protein C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1347
AatII GACGTC 1 cut(s) 945
AccB1I GGYRCC 1 cut(s) 362
AccB7I CCANNNNNTGG 1 cut(s) 1540
AccI GTMKAC 2 cut(s) 138, 1253
AciI CCGC 7 cut(s) 49, 66, 366, 901, 1083, 1337, 1508
AclWI GGATC 3 cut(s) 567, 1316, 1329
AcoI YGGCCR 2 cut(s) 36, 63
AcsI RAATTY 3 cut(s) 503, 687, 1596
AcuI CTGAAG 4 cut(s) 93, 289, 516, 1287
AcyI GRCGYC 1 cut(s) 942
AdeI CACNNNGTG 1 cut(s) 404
AfaI GTAC 3 cut(s) 14, 995, 1603
AfiI CCNNNNNNNGG 4 cut(s) 739, 1540, 1845, 1846
AflII CTTAAG 1 cut(s) 1829
AjnI CCWGG 2 cut(s) 38, 1324
AluBI AGCT 7 cut(s) 71, 104, 128, 154, 298, 604, 627
AluI AGCT 7 cut(s) 71, 104, 128, 154, 298, 604, 627
Alw26I GTCTC 6 cut(s) 258, 823, 879, 889, 1185, 1873
AlwI GGATC 3 cut(s) 567, 1316, 1329
AlwNI CAGNNNCTG 1 cut(s) 898
AoxI GGCC 6 cut(s) 36, 63, 79, 226, 542, 840
ApeKI GCWGC 8 cut(s) 68, 295, 298, 1198, 1639, 1788, 1835, 1871
ApoI RAATTY 3 cut(s) 503, 687, 1596
Asp700I GAANNNNTTC 1 cut(s) 1596
AspS9I GGNCC 7 cut(s) 227, 275, 309, 419, 730, 1208, 1505
AsuC2I CCSGG 1 cut(s) 230
AsuHPI GGTGA 6 cut(s) 445, 473, 532, 712, 1054, 1141
AvaII GGWCC 6 cut(s) 275, 309, 419, 730, 1208, 1505
AxyI CCTNAGG 2 cut(s) 670, 1002
BaeGI GKGCMC 2 cut(s) 1501, 1888
BalI TGGCCA 1 cut(s) 38
BamHI GGATCC 1 cut(s) 1321
BanI GGYRCC 1 cut(s) 362
BarI GAAGNNNNNNTAC 2 cut(s) 852, 884
BbsI GAAGAC 3 cut(s) 867, 962, 1728
BbvCI CCTCAGC 1 cut(s) 1738
BbvI GCAGC 8 cut(s) 80, 285, 307, 1210, 1651, 1800, 1847, 1858
BccI CCATC 9 cut(s) 275, 677, 806, 1166, 1346, 1412, 1707, 1765, 1839
BceAI ACGGC 1 cut(s) 1776
BcgI CGANNNNNNTGC 2 cut(s) 1631, 1665
BciT130I CCWGG 2 cut(s) 40, 1326
BciVI GTATCC 2 cut(s) 704, 1537
BcnI CCSGG 1 cut(s) 230
BcoDI GTCTC 6 cut(s) 258, 823, 879, 889, 1185, 1873
BfaI CTAG 6 cut(s) 107, 440, 596, 653, 974, 1287
BfmI CTRYAG 1 cut(s) 1436
BfrI CTTAAG 1 cut(s) 1829
BfuI GTATCC 2 cut(s) 704, 1537
Bme1390I CCNGG 3 cut(s) 40, 230, 1326
Bme18I GGWCC 6 cut(s) 275, 309, 419, 730, 1208, 1505
BmgT120I GGNCC 7 cut(s) 227, 275, 309, 419, 730, 1208, 1505
BmiI GGNNCC 6 cut(s) 171, 364, 1209, 1233, 1323, 1610
BmrFI CCNGG 3 cut(s) 40, 230, 1326
BmrI ACTGGG 2 cut(s) 564, 1746
BmsI GCATC 5 cut(s) 379, 703, 997, 1143, 1651
BmuI ACTGGG 2 cut(s) 564, 1746
BpiI GAAGAC 3 cut(s) 867, 962, 1728
BpmI CTGGAG 1 cut(s) 188
Bpu10I CCTNAGC 1 cut(s) 1738
BpuEI CTTGAG 2 cut(s) 116, 1247
BpuMI CCSGG 1 cut(s) 230
BsaHI GRCGYC 1 cut(s) 942
BsaJI CCNNGG 4 cut(s) 39, 736, 1236, 1501
BsaWI WCCGGW 1 cut(s) 242
Bsc4I CCNNNNNNNGG 4 cut(s) 739, 1540, 1845, 1846
Bse1I ACTGG 9 cut(s) 171, 340, 494, 559, 1154, 1211, 1295, 1752, 1896
Bse21I CCTNAGG 2 cut(s) 670, 1002
BseBI CCWGG 2 cut(s) 40, 1326
BseDI CCNNGG 4 cut(s) 39, 736, 1236, 1501
BseGI GGATG 6 cut(s) 1012, 1158, 1517, 1547, 1699, 1909
BseLI CCNNNNNNNGG 4 cut(s) 739, 1540, 1845, 1846
BseMII CTCAG 5 cut(s) 684, 993, 1110, 1752, 1866
BseNI ACTGG 9 cut(s) 171, 340, 494, 559, 1154, 1211, 1295, 1752, 1896
BseRI GAGGAG 3 cut(s) 151, 246, 1621
BseSI GKGCMC 2 cut(s) 1501, 1888
BseX3I CGGCCG 1 cut(s) 63
BseXI GCAGC 8 cut(s) 80, 285, 307, 1210, 1651, 1800, 1847, 1858
BseYI CCCAGC 2 cut(s) 100, 1451
BsgI GTGCAG 1 cut(s) 284
Bsh1285I CGRYCG 1 cut(s) 66
BshFI GGCC 6 cut(s) 38, 65, 81, 228, 544, 842
BshNI GGYRCC 1 cut(s) 362
BsiEI CGRYCG 1 cut(s) 66
BsiSI CCGG 3 cut(s) 230, 243, 843
BsiWI CGTACG 1 cut(s) 1601
BslFI GGGAC 2 cut(s) 953, 1584
BslI CCNNNNNNNGG 4 cut(s) 739, 1540, 1845, 1846
BsmAI GTCTC 6 cut(s) 258, 823, 879, 889, 1185, 1873
BsmBI CGTCTC 2 cut(s) 258, 1873
BsmFI GGGAC 2 cut(s) 953, 1584
BsnI GGCC 6 cut(s) 38, 65, 81, 228, 544, 842
Bsp1286I GDGCHC 2 cut(s) 1501, 1888
Bsp143I GATC 4 cut(s) 23, 559, 1321, 1783
Bsp19I CCATGG 1 cut(s) 1236
BspACI CCGC 7 cut(s) 49, 66, 366, 901, 1083, 1337, 1508
BspANI GGCC 6 cut(s) 38, 65, 81, 228, 544, 842
BspCNI CTCAG 5 cut(s) 683, 994, 1109, 1751, 1867
BspLI GGNNCC 6 cut(s) 171, 364, 1209, 1233, 1323, 1610
BspPI GGATC 3 cut(s) 567, 1316, 1329
BspQI GCTCTTC 1 cut(s) 1429
BspT107I GGYRCC 1 cut(s) 362
BspTI CTTAAG 1 cut(s) 1829
BsrI ACTGG 9 cut(s) 171, 340, 494, 559, 1154, 1211, 1295, 1752, 1896
BssECI CCNNGG 4 cut(s) 39, 736, 1236, 1501
BssMI GATC 4 cut(s) 23, 559, 1321, 1783
BssNAI GTATAC 1 cut(s) 1254
BssNI GRCGYC 1 cut(s) 942
BssT1I CCWWGG 2 cut(s) 1236, 1501
Bst1107I GTATAC 1 cut(s) 1254
Bst2UI CCWGG 2 cut(s) 40, 1326
Bst4CI ACNGT 8 cut(s) 143, 404, 724, 737, 856, 1074, 1124, 1688
Bst6I CTCTTC 3 cut(s) 192, 1188, 1429
BstACI GRCGYC 1 cut(s) 942
BstAFI CTTAAG 1 cut(s) 1829
BstAPI GCANNNNNTGC 1 cut(s) 898
BstC8I GCNNGC 4 cut(s) 83, 210, 1292, 1497
BstDEI CTNAG 6 cut(s) 670, 1002, 1096, 1738, 1841, 1875
BstDSI CCRYGG 2 cut(s) 736, 1236
BstF5I GGATG 6 cut(s) 1012, 1158, 1517, 1547, 1699, 1909
BstKTI GATC 4 cut(s) 26, 562, 1324, 1786
BstMAI GTCTC 6 cut(s) 258, 823, 879, 889, 1185, 1873
BstMBI GATC 4 cut(s) 23, 559, 1321, 1783
BstMCI CGRYCG 1 cut(s) 66
BstMWI GCNNNNNNNGC 1 cut(s) 898
BstNI CCWGG 2 cut(s) 40, 1326
BstNSI RCATGY 3 cut(s) 925, 959, 1160
BstSCI CCNGG 3 cut(s) 38, 228, 1324
BstSFI CTRYAG 1 cut(s) 1436
BstSLI GKGCMC 2 cut(s) 1501, 1888
BstV1I GCAGC 8 cut(s) 80, 285, 307, 1210, 1651, 1800, 1847, 1858
BstV2I GAAGAC 3 cut(s) 867, 962, 1728
BstX2I RGATCY 2 cut(s) 559, 1321
BstYI RGATCY 2 cut(s) 559, 1321
BstZ17I GTATAC 1 cut(s) 1254
BstZI CGGCCG 1 cut(s) 63
Bsu36I CCTNAGG 2 cut(s) 670, 1002
BsuI GTATCC 2 cut(s) 704, 1537
BsuRI GGCC 6 cut(s) 38, 65, 81, 228, 544, 842
BtgI CCRYGG 2 cut(s) 736, 1236
BtgZI GCGATG 1 cut(s) 696
BtsCI GGATG 6 cut(s) 1012, 1158, 1517, 1547, 1699, 1909
BtsIMutI CAGTG 5 cut(s) 164, 199, 400, 552, 572
Cac8I GCNNGC 4 cut(s) 83, 210, 1292, 1497
CaiI CAGNNNCTG 1 cut(s) 898
Cfr13I GGNCC 7 cut(s) 227, 275, 309, 419, 730, 1208, 1505
Csp6I GTAC 3 cut(s) 13, 994, 1602
CviQI GTAC 3 cut(s) 13, 994, 1602
DdeI CTNAG 6 cut(s) 670, 1002, 1096, 1738, 1841, 1875
DpnI GATC 4 cut(s) 25, 561, 1323, 1785
DpnII GATC 4 cut(s) 23, 559, 1321, 1783
DraIII CACNNNGTG 1 cut(s) 404
EaeI YGGCCR 2 cut(s) 36, 63
EagI CGGCCG 1 cut(s) 63
Eam1104I CTCTTC 3 cut(s) 192, 1188, 1429
EarI CTCTTC 3 cut(s) 192, 1188, 1429
EciI GGCGGA 1 cut(s) 1497
EclXI CGGCCG 1 cut(s) 63
Eco130I CCWWGG 2 cut(s) 1236, 1501
Eco47I GGWCC 6 cut(s) 275, 309, 419, 730, 1208, 1505
Eco52I CGGCCG 1 cut(s) 63
Eco57I CTGAAG 4 cut(s) 93, 289, 516, 1287
Eco81I CCTNAGG 2 cut(s) 670, 1002
EcoO109I RGGNCCY 1 cut(s) 275
EcoRI GAATTC 1 cut(s) 687
EcoRII CCWGG 2 cut(s) 38, 1324
EcoT14I CCWWGG 2 cut(s) 1236, 1501
EcoT22I ATGCAT 1 cut(s) 1158
ErhI CCWWGG 2 cut(s) 1236, 1501
Esp3I CGTCTC 2 cut(s) 258, 1873
FaqI GGGAC 2 cut(s) 953, 1584
FauI CCCGC 2 cut(s) 42, 1330
FblI GTMKAC 2 cut(s) 138, 1253
FokI GGATG 5 cut(s) 1019, 1165, 1504, 1534, 1686
FspBI CTAG 6 cut(s) 107, 440, 596, 653, 974, 1287
GsaI CCCAGC 2 cut(s) 104, 1455
GsuI CTGGAG 1 cut(s) 188
HaeIII GGCC 6 cut(s) 38, 65, 81, 228, 544, 842
HapII CCGG 3 cut(s) 230, 243, 843
Hin1I GRCGYC 1 cut(s) 942
HincII GTYRAC 2 cut(s) 139, 1120
HindII GTYRAC 2 cut(s) 139, 1120
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 8 cut(s) 59, 425, 846, 887, 1088, 1441, 1530, 1907
HpaII CCGG 3 cut(s) 230, 243, 843
HphI GGTGA 6 cut(s) 445, 473, 532, 712, 1054, 1141
Hpy166II GTNNAC 7 cut(s) 139, 983, 994, 1120, 1254, 1278, 1684
Hpy188I TCNGA 2 cut(s) 1099, 1306
Hpy188III TCNNGA 6 cut(s) 56, 422, 455, 1001, 1527, 1534
Hpy8I GTNNAC 7 cut(s) 139, 983, 994, 1120, 1254, 1278, 1684
Hpy99I CGWCG 1 cut(s) 1781
HpyCH4III ACNGT 8 cut(s) 143, 404, 724, 737, 856, 1074, 1124, 1688
HpyCH4IV ACGT 2 cut(s) 942, 1389
HpyCH4V TGCA 9 cut(s) 4, 148, 295, 301, 392, 959, 1010, 1156, 1639
HpyF10VI GCNNNNNNNGC 1 cut(s) 898
HpyF3I CTNAG 6 cut(s) 670, 1002, 1096, 1738, 1841, 1875
HpySE526I ACGT 2 cut(s) 942, 1389
Hsp92I GRCGYC 1 cut(s) 942
Kzo9I GATC 4 cut(s) 23, 559, 1321, 1783
LguI GCTCTTC 1 cut(s) 1429
LmnI GCTCC 5 cut(s) 164, 169, 601, 636, 1608
Lsp1109I GCAGC 8 cut(s) 80, 285, 307, 1210, 1651, 1800, 1847, 1858
LweI GCATC 5 cut(s) 379, 703, 997, 1143, 1651
MaeI CTAG 6 cut(s) 107, 440, 596, 653, 974, 1287
MaeII ACGT 2 cut(s) 942, 1389
MaeIII GTNAC 3 cut(s) 409, 568, 1213
MalI GATC 4 cut(s) 25, 561, 1323, 1785
MboI GATC 4 cut(s) 23, 559, 1321, 1783
MflI RGATCY 2 cut(s) 559, 1321
MhlI GDGCHC 2 cut(s) 1501, 1888
MlsI TGGCCA 1 cut(s) 38
MluNI TGGCCA 1 cut(s) 38
MlyI GAGTC 5 cut(s) 434, 855, 881, 1082, 1450
MmeI TCCRAC 1 cut(s) 1881
Mox20I TGGCCA 1 cut(s) 38
Mph1103I ATGCAT 1 cut(s) 1158
MroXI GAANNNNTTC 1 cut(s) 1596
MscI TGGCCA 1 cut(s) 38
MseI TTAA 5 cut(s) 468, 726, 1058, 1266, 1830
MslI CAYNNNNRTG 1 cut(s) 1467
Msp20I TGGCCA 1 cut(s) 38
MspA1I CMGCKG 3 cut(s) 71, 298, 1085
MspCI CTTAAG 1 cut(s) 1829
MspI CCGG 3 cut(s) 230, 243, 843
MspR9I CCNGG 3 cut(s) 40, 230, 1326
MvaI CCWGG 2 cut(s) 40, 1326
MwoI GCNNNNNNNGC 1 cut(s) 898
NciI CCSGG 1 cut(s) 230
NcoI CCATGG 1 cut(s) 1236
NdeII GATC 4 cut(s) 23, 559, 1321, 1783
NlaIV GGNNCC 6 cut(s) 171, 364, 1209, 1233, 1323, 1610
NmuCI GTSAC 2 cut(s) 409, 568
NsiI ATGCAT 1 cut(s) 1158
NspI RCATGY 3 cut(s) 925, 959, 1160
PciSI GCTCTTC 1 cut(s) 1429
PdmI GAANNNNTTC 1 cut(s) 1596
PfeI GAWTC 3 cut(s) 59, 1530, 1907
Pfl23II CGTACG 1 cut(s) 1601
PflMI CCANNNNNTGG 1 cut(s) 1540
PfoI TCCNGGA 1 cut(s) 1324
PleI GAGTC 5 cut(s) 433, 854, 881, 1082, 1449
PpsI GAGTC 5 cut(s) 433, 854, 881, 1082, 1449
PpuMI RGGWCCY 1 cut(s) 275
PsiI TTATAA 1 cut(s) 1347
Psp5II RGGWCCY 1 cut(s) 275
Psp6I CCWGG 2 cut(s) 38, 1324
PspFI CCCAGC 2 cut(s) 100, 1451
PspGI CCWGG 2 cut(s) 38, 1324
PspLI CGTACG 1 cut(s) 1601
PspN4I GGNNCC 6 cut(s) 171, 364, 1209, 1233, 1323, 1610
PspPI GGNCC 7 cut(s) 227, 275, 309, 419, 730, 1208, 1505
PspPPI RGGWCCY 1 cut(s) 275
PstNI CAGNNNCTG 1 cut(s) 898
PsuI RGATCY 2 cut(s) 559, 1321
PvuII CAGCTG 2 cut(s) 71, 298
RsaI GTAC 3 cut(s) 14, 995, 1603
RsaNI GTAC 3 cut(s) 13, 994, 1602
RseI CAYNNNNRTG 1 cut(s) 1467
SalI GTCGAC 1 cut(s) 137
SapI GCTCTTC 1 cut(s) 1429
SaqAI TTAA 5 cut(s) 468, 726, 1058, 1266, 1830
Sau3AI GATC 4 cut(s) 23, 559, 1321, 1783
Sau96I GGNCC 7 cut(s) 227, 275, 309, 419, 730, 1208, 1505
SchI GAGTC 5 cut(s) 434, 855, 881, 1082, 1450
ScrFI CCNGG 3 cut(s) 40, 230, 1326
SduI GDGCHC 2 cut(s) 1501, 1888
SfaNI GCATC 5 cut(s) 379, 703, 997, 1143, 1651
SfcI CTRYAG 1 cut(s) 1436
SinI GGWCC 6 cut(s) 275, 309, 419, 730, 1208, 1505
SmiMI CAYNNNNRTG 1 cut(s) 1467
SmlI CTYRAG 3 cut(s) 131, 1226, 1829
SmoI CTYRAG 3 cut(s) 131, 1226, 1829
SsiI CCGC 7 cut(s) 49, 66, 366, 901, 1083, 1337, 1508
SspI AATATT 2 cut(s) 907, 1315
SspMI CTAG 6 cut(s) 107, 440, 596, 653, 974, 1287
StyD4I CCNGG 3 cut(s) 38, 228, 1324
StyI CCWWGG 2 cut(s) 1236, 1501
TaaI ACNGT 8 cut(s) 143, 404, 724, 737, 856, 1074, 1124, 1688
TaiI ACGT 2 cut(s) 945, 1392
TaqI TCGA 4 cut(s) 26, 138, 926, 1776
TatI WGTACW 1 cut(s) 993
TauI GCSGC 2 cut(s) 68, 368
TfiI GAWTC 3 cut(s) 59, 1530, 1907
Tru1I TTAA 5 cut(s) 468, 726, 1058, 1266, 1830
Tru9I TTAA 5 cut(s) 468, 726, 1058, 1266, 1830
TscAI CASTG 5 cut(s) 171, 199, 407, 559, 579
TseFI GTSAC 2 cut(s) 409, 568
TseI GCWGC 8 cut(s) 68, 295, 298, 1198, 1639, 1788, 1835, 1871
Tsp45I GTSAC 2 cut(s) 409, 568
TspDTI ATGAA 7 cut(s) 1083, 1158, 1416, 1485, 1644, 1785, 1846
TspGWI ACGGA 1 cut(s) 686
TspRI CASTG 5 cut(s) 171, 199, 407, 559, 579
Van91I CCANNNNNTGG 1 cut(s) 1540
Vha464I CTTAAG 1 cut(s) 1829
VpaK11BI GGWCC 6 cut(s) 275, 309, 419, 730, 1208, 1505
XapI RAATTY 3 cut(s) 503, 687, 1596
XceI RCATGY 3 cut(s) 925, 959, 1160
XmiI GTMKAC 2 cut(s) 138, 1253
XmnI GAANNNNTTC 1 cut(s) 1596
XspI CTAG 6 cut(s) 107, 440, 596, 653, 974, 1287
ZraI GACGTC 1 cut(s) 943
Zsp2I ATGCAT 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.