Cysteine-rich TM module stress tolerance
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g12190 |
| malus_domestica | MD05G1252900.v1.1 MD10G1234000.v1.1 |
| prunus_persica | Prupe.4G110700_v2.0.a1 Prupe.4G110900_v2.0.a1 Prupe.4G111000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0019971 |
| rosa_laevigata | RLG00000032490 |
| rosa_roxburghii | Rroxscaffold_1G00058220 |
| rosa_rugosa | Rorug05G0055900 |
| rosa_samantha | Rh5AG146000 Rh5BG145300 Rh5CG157000 Rh5DG144800 |
| rosa_wichuraiana | Rw5G012890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 199 |
| AciI | CCGC | 1 cut(s) | 281 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 62 |
| AluBI | AGCT | 2 cut(s) | 255, 296 |
| AluI | AGCT | 2 cut(s) | 255, 296 |
| Alw26I | GTCTC | 1 cut(s) | 204 |
| Ama87I | CYCGRG | 1 cut(s) | 173 |
| AspS9I | GGNCC | 3 cut(s) | 92, 140, 287 |
| AsuHPI | GGTGA | 1 cut(s) | 227 |
| AvaI | CYCGRG | 1 cut(s) | 173 |
| AvaII | GGWCC | 3 cut(s) | 92, 140, 287 |
| BccI | CCATC | 3 cut(s) | 27, 131, 212 |
| BcoDI | GTCTC | 1 cut(s) | 204 |
| BfmI | CTRYAG | 1 cut(s) | 192 |
| BfuAI | ACCTGC | 1 cut(s) | 199 |
| BisI | GCNGC | 1 cut(s) | 281 |
| BlsI | GCNGC | 1 cut(s) | 282 |
| Bme18I | GGWCC | 3 cut(s) | 92, 140, 287 |
| BmeT110I | CYCGRG | 1 cut(s) | 173 |
| BmgT120I | GGNCC | 3 cut(s) | 92, 140, 287 |
| BmiI | GGNNCC | 3 cut(s) | 33, 288, 289 |
| BpmI | CTGGAG | 1 cut(s) | 18 |
| BsaWI | WCCGGW | 1 cut(s) | 62 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 62 |
| Bse1I | ACTGG | 1 cut(s) | 113 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BseNI | ACTGG | 1 cut(s) | 113 |
| BseYI | CCCAGC | 1 cut(s) | 283 |
| BsgI | GTGCAG | 1 cut(s) | 87 |
| BsiHKCI | CYCGRG | 1 cut(s) | 173 |
| BsiSI | CCGG | 1 cut(s) | 63 |
| BslFI | GGGAC | 1 cut(s) | 273 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 62 |
| BsmAI | GTCTC | 1 cut(s) | 204 |
| BsmFI | GGGAC | 1 cut(s) | 273 |
| BsoBI | CYCGRG | 1 cut(s) | 173 |
| BspACI | CCGC | 1 cut(s) | 281 |
| BspLI | GGNNCC | 3 cut(s) | 33, 288, 289 |
| BspMAI | CTGCAG | 1 cut(s) | 196 |
| BspMI | ACCTGC | 1 cut(s) | 199 |
| BsrI | ACTGG | 1 cut(s) | 113 |
| Bst4CI | ACNGT | 1 cut(s) | 318 |
| BstMAI | GTCTC | 1 cut(s) | 204 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 184, 261, 270 |
| BstSFI | CTRYAG | 1 cut(s) | 192 |
| BveI | ACCTGC | 1 cut(s) | 199 |
| Cfr13I | GGNCC | 3 cut(s) | 92, 140, 287 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 70, 105 |
| CviAII | CATG | 3 cut(s) | 127, 134, 247 |
| CviJI | RGCY | 3 cut(s) | 32, 255, 296 |
| CviKI_1 | RGCY | 3 cut(s) | 32, 255, 296 |
| Eco47I | GGWCC | 3 cut(s) | 92, 140, 287 |
| Eco88I | CYCGRG | 1 cut(s) | 173 |
| EcoO109I | RGGNCCY | 1 cut(s) | 287 |
| FaeI | CATG | 3 cut(s) | 130, 137, 250 |
| FaiI | YATR | 7 cut(s) | 43, 97, 99, 128, 135, 248, 278 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 285, 317 |
| FaqI | GGGAC | 1 cut(s) | 273 |
| FatI | CATG | 3 cut(s) | 126, 133, 246 |
| FauNDI | CATATG | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 1 cut(s) | 281 |
| Fsp4HI | GCNGC | 1 cut(s) | 281 |
| GluI | GCNGC | 1 cut(s) | 281 |
| GsaI | CCCAGC | 1 cut(s) | 287 |
| GsuI | CTGGAG | 1 cut(s) | 18 |
| HapII | CCGG | 1 cut(s) | 63 |
| Hin1II | CATG | 3 cut(s) | 130, 137, 250 |
| HindIII | AAGCTT | 1 cut(s) | 294 |
| HinfI | GANTC | 2 cut(s) | 4, 197 |
| HpaII | CCGG | 1 cut(s) | 63 |
| HphI | GGTGA | 1 cut(s) | 227 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188III | TCNNGA | 5 cut(s) | 8, 35, 74, 143, 290 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyAV | CCTTC | 1 cut(s) | 69 |
| HpyCH4III | ACNGT | 1 cut(s) | 318 |
| HpyCH4V | TGCA | 4 cut(s) | 68, 107, 194, 228 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 184, 261, 270 |
| Hsp92II | CATG | 3 cut(s) | 130, 137, 250 |
| KflI | GGGWCCC | 1 cut(s) | 287 |
| LmnI | GCTCC | 1 cut(s) | 37 |
| LpnPI | CCDG | 8 cut(s) | 14, 26, 48, 76, 126, 156, 204, 269 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MlyI | GAGTC | 2 cut(s) | 13, 206 |
| MnlI | CCTC | 2 cut(s) | 31, 174 |
| MspA1I | CMGCKG | 1 cut(s) | 283 |
| MspI | CCGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 184, 261, 270 |
| NdeI | CATATG | 1 cut(s) | 97 |
| NlaIII | CATG | 3 cut(s) | 130, 137, 250 |
| NlaIV | GGNNCC | 3 cut(s) | 33, 288, 289 |
| NmuCI | GTSAC | 1 cut(s) | 5 |
| PkrI | GCNGC | 1 cut(s) | 282 |
| PleI | GAGTC | 2 cut(s) | 12, 205 |
| PpsI | GAGTC | 2 cut(s) | 12, 205 |
| PpuMI | RGGWCCY | 1 cut(s) | 287 |
| Psp5II | RGGWCCY | 1 cut(s) | 287 |
| PspFI | CCCAGC | 1 cut(s) | 283 |
| PspN4I | GGNNCC | 3 cut(s) | 33, 288, 289 |
| PspPI | GGNCC | 3 cut(s) | 92, 140, 287 |
| PspPPI | RGGWCCY | 1 cut(s) | 287 |
| PstI | CTGCAG | 1 cut(s) | 196 |
| SatI | GCNGC | 1 cut(s) | 281 |
| Sau96I | GGNCC | 3 cut(s) | 92, 140, 287 |
| SchI | GAGTC | 2 cut(s) | 13, 206 |
| SetI | ASST | 8 cut(s) | 42, 61, 91, 166, 193, 257, 298, 303 |
| SfcI | CTRYAG | 1 cut(s) | 192 |
| SinI | GGWCC | 3 cut(s) | 92, 140, 287 |
| SsiI | CCGC | 1 cut(s) | 281 |
| TaaI | ACNGT | 1 cut(s) | 318 |
| TauI | GCSGC | 1 cut(s) | 283 |
| TseFI | GTSAC | 1 cut(s) | 5 |
| Tsp45I | GTSAC | 1 cut(s) | 5 |
| TspDTI | ATGAA | 1 cut(s) | 143 |
| VpaK11BI | GGWCC | 3 cut(s) | 92, 140, 287 |