Prupe.4G223000_v2.0.a1

Trigger factor-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
14002080 .. 14006955
4876 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G223000.1

Sequence Viewer

Length: 1605 bp
ATGGAGCTCTGTATGAGTCTCGTCAATGGTGGCTCCATCTCTGTCGTCAACGTAAAACCTTCTCTCCCTTCACGCTCTCTTCCTGTTCGTAAAAACCCCATTTCTCTTCAGTCCTACACTTGTCTTAGACCCCCTTCTCTTTCCCGCCAATTCCAACCTTCCCAATTCGCTGTTTCGGCTTCTCCTTCTTCCTCTTCTTCTTCTTCCACGGCTCTCAGCTCTGAGAAAGACCAGCTTCCAGCGGACATCGTTGTCACAGAGACCCAAGAACCCAATTCCAGAGTTAAGTTGAGCATACAAGTACCACCAGAGGTCTGTGATGACTGTTACAAAAGGGTTATAGACGAGTTCATGAAGCAAGCCAAGGTTCCGGGATTTCGGCCTGGAAAGAAGGTGCCTGAGAGTATTCTTGTGAGTCATGTTGGGAAGAAAAGTGTACAGAAGGCTGCAGTTGAATCTATTTTGAGGAGGACCCTTCCACATGCCATGTCTTCGGTCACAGGCACGCCTTTGAGAGACTCAGTCCGTATTGTAACCAGATTTTCAGATATGGAGCAGGCCTACTCTTCTCTCAATTCTCTCAGATATGATGTGATTGTTGATATAGCACCGGAAGTGAAATGGATTCCTGAGAATGGATACAAGAATTTGAAGGTCGTTGTTGAGATAGACAGTGACATAAATGCACAAAAAGCTTCTGAGCAAGAATTAAGACGCCGCCATAAGTCCCTAGGTTCATTGAGAATTGTAACCGACAGAGGTCTACAGATCGGTGATCTTGCTGTCCTTGATATATCTGCAACAACCATAGATCAAGATGAATCAAATGTTAAAAGTATTCCATCCGCTGAGAGTAAAGGTTATCATTTTGATACGGAAGATGGTGATAAAGTAGTTCCTGGTTTCCTCAATTCGATAATTGGAATTCAACGAGGTGAAACAAAGTCCTTTCCACTGGTATTTCCTGAATCATGGACACAAGAAGATCTTCGAGGAATTCATGCTCAATTCAATGTTGAATGCAAGGAATTATTTTACAGAGATTTACCCGAATTGGATGACTCCCTTGCTGAAAGGCTTCTCCCTGGAGGCACCAGCCTGAAACAGGTCAAGGAATCATTGTTGCAAAAATTCCTGGAAGTGGAACAAACAGCTAGAGAGCAAGCAGCTGATAATGCCATTCTAGATCAGCTTTGCAAGATGGTAGAGGTTGACATTCCTCAGTCCTTTTTTGAGGAGCAAGGTAGGCAGCTTTATGGAGCCAGACTTTTGGAGATACAGGCAAATATAAAATTAAATGAACAGCAATTGGCTTCTCTGTCAAGTAAGAAGGCTGTAGATGAGTATCTTCTAAACCAGAAGGAGAACATTACACATATGATAAAACAGAGTCTGGCTGTTGGAGACATATATAAACGTGAACATTTGCAGCTTTCAACAGAGGAGCTTGTCAAAGAAGTTGAAAATTCCATTGCCGAATTCAAACGTCAAAAACAAGATTATGATGAAGAACGCGTTAGGGGACAGGTTCAAGAGATTTTAGAGGGAGCAAAGGTGCTTGAATGGTTGAGAGCGCATGCAGAGATTCAGTATATAACTAGATGA

Protein Analysis

535

Amino Acids

59.95

Weight (kDa)

5.56

Isoelectric Point (pI)

56.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 251
AccB1I GGYRCC 2 cut(s) 394, 1091
AccI GTMKAC 1 cut(s) 763
AccII CGCG 1 cut(s) 1515
AciI CCGC 4 cut(s) 145, 242, 718, 846
AcsI RAATTY 6 cut(s) 646, 924, 996, 1130, 1465, 1478
AcuI CTGAAG 1 cut(s) 92
AcyI GRCGYC 1 cut(s) 715
AfaI GTAC 2 cut(s) 303, 438
AfiI CCNNNNNNNGG 3 cut(s) 635, 1105, 1141
AflIII ACRYGT 1 cut(s) 1513
AjnI CCWGG 4 cut(s) 382, 898, 1084, 1134
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 4 cut(s) 23, 254, 510, 1398
AlwNI CAGNNNCTG 1 cut(s) 1393
AoxI GGCC 2 cut(s) 380, 558
ApeKI GCWGC 4 cut(s) 446, 1166, 1249, 1429
ApoI RAATTY 6 cut(s) 646, 924, 996, 1130, 1465, 1478
Asp700I GAANNNNTTC 2 cut(s) 987, 1077
AspA2I CCTAGG 1 cut(s) 730
AspLEI GCGC 1 cut(s) 1576
AspS9I GGNCC 1 cut(s) 471
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 3 cut(s) 785, 896, 947
AvaII GGWCC 1 cut(s) 471
AvrII CCTAGG 1 cut(s) 730
BanI GGYRCC 2 cut(s) 394, 1091
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 483
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 433, 1178, 1261, 1441
BccI CCATC 4 cut(s) 44, 850, 875, 1195
BceAI ACGGC 1 cut(s) 225
BciT130I CCWGG 4 cut(s) 384, 900, 1086, 1136
BciVI GTATCC 1 cut(s) 632
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 4 cut(s) 23, 254, 510, 1398
BfaI CTAG 4 cut(s) 731, 1155, 1184, 1599
BfmI CTRYAG 3 cut(s) 447, 764, 1335
BfuI GTATCC 1 cut(s) 632
BglII AGATCT 1 cut(s) 985
BisI GCNGC 5 cut(s) 447, 718, 1167, 1250, 1430
BlnI CCTAGG 1 cut(s) 730
BlsI GCNGC 5 cut(s) 448, 719, 1168, 1251, 1431
Bme1390I CCNGG 5 cut(s) 372, 384, 900, 1086, 1136
Bme18I GGWCC 1 cut(s) 471
BmgT120I GGNCC 1 cut(s) 471
BmiI GGNNCC 6 cut(s) 34, 369, 396, 473, 1093, 1261
BmrFI CCNGG 5 cut(s) 372, 384, 900, 1086, 1136
BoxI GACNNNNGTC 1 cut(s) 759
BpiI GAAGAC 1 cut(s) 483
BpmI CTGGAG 1 cut(s) 1107
BpuMI CCSGG 1 cut(s) 372
BsaBI GATNNNNATC 1 cut(s) 1344
BsaHI GRCGYC 1 cut(s) 715
BsaI GGTCTC 1 cut(s) 254
BsaJI CCNNGG 4 cut(s) 207, 363, 730, 1084
BsaWI WCCGGW 1 cut(s) 610
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 1539, 1569
Bsc4I CCNNNNNNNGG 3 cut(s) 635, 1105, 1141
Bse1I ACTGG 1 cut(s) 960
Bse3DI GCAATG 1 cut(s) 1470
Bse8I GATNNNNATC 1 cut(s) 1344
BseBI CCWGG 4 cut(s) 384, 900, 1086, 1136
BseDI CCNNGG 4 cut(s) 207, 363, 730, 1084
BseGI GGATG 2 cut(s) 842, 1063
BseJI GATNNNNATC 1 cut(s) 1344
BseLI CCNNNNNNNGG 3 cut(s) 635, 1105, 1141
BseMI GCAATG 1 cut(s) 1470
BseMII CTCAG 9 cut(s) 213, 229, 390, 534, 595, 621, 690, 840, 1235
BseNI ACTGG 1 cut(s) 960
BseRI GAGGAG 3 cut(s) 481, 1250, 1457
BseXI GCAGC 4 cut(s) 433, 1178, 1261, 1441
Bsh1236I CGCG 1 cut(s) 1515
BshFI GGCC 2 cut(s) 382, 560
BshNI GGYRCC 2 cut(s) 394, 1091
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 2 cut(s) 371, 611
BslFI GGGAC 2 cut(s) 712, 1536
BslI CCNNNNNNNGG 3 cut(s) 635, 1105, 1141
BsmAI GTCTC 4 cut(s) 23, 254, 510, 1398
BsmFI GGGAC 2 cut(s) 712, 1536
BsmI GAATGC 1 cut(s) 1025
BsnI GGCC 2 cut(s) 382, 560
Bso31I GGTCTC 1 cut(s) 254
Bsp1286I GDGCHC 1 cut(s) 9
Bsp1407I TGTACA 1 cut(s) 436
Bsp143I GATC 5 cut(s) 768, 775, 811, 985, 1186
BspACI CCGC 4 cut(s) 145, 242, 718, 846
BspANI GGCC 2 cut(s) 382, 560
BspCNI CTCAG 9 cut(s) 214, 228, 391, 533, 594, 622, 691, 841, 1234
BspFNI CGCG 1 cut(s) 1515
BspHI TCATGA 1 cut(s) 351
BspLI GGNNCC 6 cut(s) 34, 369, 396, 473, 1093, 1261
BspMAI CTGCAG 1 cut(s) 451
BspT107I GGYRCC 2 cut(s) 394, 1091
BspTNI GGTCTC 1 cut(s) 254
BsrDI GCAATG 1 cut(s) 1470
BsrGI TGTACA 1 cut(s) 436
BsrI ACTGG 1 cut(s) 960
BssECI CCNNGG 4 cut(s) 207, 363, 730, 1084
BssMI GATC 5 cut(s) 768, 775, 811, 985, 1186
BssNI GRCGYC 1 cut(s) 715
BssT1I CCWWGG 2 cut(s) 363, 730
Bst2UI CCWGG 4 cut(s) 384, 900, 1086, 1136
Bst4CI ACNGT 2 cut(s) 326, 674
Bst6I CTCTTC 4 cut(s) 84, 111, 199, 571
BstACI GRCGYC 1 cut(s) 715
BstAUI TGTACA 1 cut(s) 436
BstC8I GCNNGC 5 cut(s) 360, 506, 558, 1164, 1578
BstDSI CCRYGG 1 cut(s) 207
BstENI CCTNNNNNAGG 1 cut(s) 1103
BstF5I GGATG 2 cut(s) 842, 1063
BstFNI CGCG 1 cut(s) 1515
BstHHI GCGC 1 cut(s) 1576
BstKTI GATC 5 cut(s) 771, 778, 814, 988, 1189
BstMAI GTCTC 4 cut(s) 23, 254, 510, 1398
BstMBI GATC 5 cut(s) 768, 775, 811, 985, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 176, 692, 1175, 1246
BstNI CCWGG 4 cut(s) 384, 900, 1086, 1136
BstNSI RCATGY 2 cut(s) 485, 1580
BstPAI GACNNNNGTC 1 cut(s) 759
BstSCI CCNGG 5 cut(s) 370, 382, 898, 1084, 1134
BstSFI CTRYAG 3 cut(s) 447, 764, 1335
BstUI CGCG 1 cut(s) 1515
BstV1I GCAGC 4 cut(s) 433, 1178, 1261, 1441
BstV2I GAAGAC 1 cut(s) 483
BstX2I RGATCY 1 cut(s) 985
BstXI CCANNNNNNTGG 1 cut(s) 1270
BstYI RGATCY 1 cut(s) 985
BsuI GTATCC 1 cut(s) 632
BsuRI GGCC 2 cut(s) 382, 560
BtgI CCRYGG 1 cut(s) 207
BtsCI GGATG 2 cut(s) 842, 1063
BtsIMutI CAGTG 2 cut(s) 679, 953
Cac8I GCNNGC 5 cut(s) 360, 506, 558, 1164, 1578
CaiI CAGNNNCTG 1 cut(s) 1393
CciI TCATGA 1 cut(s) 351
CfoI GCGC 1 cut(s) 1576
Cfr13I GGNCC 1 cut(s) 471
CseI GACGC 1 cut(s) 723
Csp6I GTAC 2 cut(s) 302, 437
CviAII CATG 7 cut(s) 352, 419, 482, 487, 972, 1001, 1577
CviQI GTAC 2 cut(s) 302, 437
DpnI GATC 5 cut(s) 770, 777, 813, 987, 1188
DpnII GATC 5 cut(s) 768, 775, 811, 985, 1186
DrdI GACNNNNNNGTC 1 cut(s) 251
DseDI GACNNNNNNGTC 1 cut(s) 251
Eam1104I CTCTTC 4 cut(s) 84, 111, 199, 571
EarI CTCTTC 4 cut(s) 84, 111, 199, 571
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 2 cut(s) 363, 730
Eco147I AGGCCT 1 cut(s) 560
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 254
Eco47I GGWCC 1 cut(s) 471
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 92
EcoICRI GAGCTC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 1103
EcoO109I RGGNCCY 1 cut(s) 471
EcoRI GAATTC 3 cut(s) 924, 996, 1478
EcoRII CCWGG 4 cut(s) 382, 898, 1084, 1134
EcoT14I CCWWGG 2 cut(s) 363, 730
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 2 cut(s) 363, 730
FaeI CATG 7 cut(s) 355, 422, 485, 490, 975, 1004, 1580
FalI AAGNNNNNCTT 4 cut(s) 219, 251, 972, 1004
FaqI GGGAC 2 cut(s) 712, 1536
FatI CATG 7 cut(s) 351, 418, 481, 486, 971, 1000, 1576
FauI CCCGC 1 cut(s) 152
FauNDI CATATG 1 cut(s) 1377
FblI GTMKAC 1 cut(s) 763
Fnu4HI GCNGC 5 cut(s) 447, 718, 1167, 1250, 1430
FokI GGATG 2 cut(s) 829, 1070
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 5 cut(s) 447, 718, 1167, 1250, 1430
FspBI CTAG 4 cut(s) 731, 1155, 1184, 1599
GlaI GCGC 1 cut(s) 1575
GluI GCNGC 5 cut(s) 447, 718, 1167, 1250, 1430
GsuI CTGGAG 1 cut(s) 1107
HaeIII GGCC 2 cut(s) 382, 560
HapII CCGG 2 cut(s) 371, 611
HgaI GACGC 1 cut(s) 723
HhaI GCGC 1 cut(s) 1576
Hin1I GRCGYC 1 cut(s) 715
Hin1II CATG 7 cut(s) 355, 422, 485, 490, 975, 1004, 1580
Hin6I GCGC 1 cut(s) 1574
HinP1I GCGC 1 cut(s) 1574
HincII GTYRAC 2 cut(s) 49, 1213
HindII GTYRAC 2 cut(s) 49, 1213
HindIII AAGCTT 1 cut(s) 693
HpaII CCGG 2 cut(s) 371, 611
HphI GGTGA 3 cut(s) 785, 896, 947
Hpy166II GTNNAC 5 cut(s) 49, 437, 764, 1213, 1421
Hpy188I TCNGA 4 cut(s) 223, 547, 584, 700
Hpy188III TCNNGA 7 cut(s) 279, 352, 629, 815, 965, 1184, 1532
Hpy8I GTNNAC 5 cut(s) 49, 437, 764, 1213, 1421
HpyCH4III ACNGT 2 cut(s) 326, 674
HpyCH4IV ACGT 3 cut(s) 51, 1417, 1486
HpyCH4V TGCA 8 cut(s) 449, 686, 800, 1023, 1126, 1197, 1429, 1580
HpyF10VI GCNNNNNNNGC 4 cut(s) 176, 692, 1175, 1246
HpySE526I ACGT 3 cut(s) 51, 1417, 1486
Hsp92I GRCGYC 1 cut(s) 715
Hsp92II CATG 7 cut(s) 355, 422, 485, 490, 975, 1004, 1580
HspAI GCGC 1 cut(s) 1574
Kzo9I GATC 5 cut(s) 768, 775, 811, 985, 1186
LmnI GCTCC 7 cut(s) 4, 38, 553, 1237, 1259, 1444, 1547
Lsp1109I GCAGC 4 cut(s) 433, 1178, 1261, 1441
MaeI CTAG 4 cut(s) 731, 1155, 1184, 1599
MaeII ACGT 3 cut(s) 51, 1417, 1486
MaeIII GTNAC 6 cut(s) 253, 326, 496, 532, 674, 748
MalI GATC 5 cut(s) 770, 777, 813, 987, 1188
MboI GATC 5 cut(s) 768, 775, 811, 985, 1186
MfeI CAATTG 1 cut(s) 1307
MflI RGATCY 1 cut(s) 985
MhlI GDGCHC 1 cut(s) 9
MluI ACGCGT 1 cut(s) 1513
MlyI GAGTC 5 cut(s) 25, 424, 512, 1055, 1399
MmeI TCCRAC 2 cut(s) 178, 1381
MroXI GAANNNNTTC 2 cut(s) 987, 1077
MseI TTAA 4 cut(s) 285, 710, 831, 1295
MspA1I CMGCKG 3 cut(s) 242, 848, 1169
MspI CCGG 2 cut(s) 371, 611
MspR9I CCNGG 5 cut(s) 372, 384, 900, 1086, 1136
MunI CAATTG 1 cut(s) 1307
Mva1269I GAATGC 1 cut(s) 1025
MvaI CCWGG 4 cut(s) 384, 900, 1086, 1136
MvnI CGCG 1 cut(s) 1515
MwoI GCNNNNNNNGC 4 cut(s) 176, 692, 1175, 1246
NciI CCSGG 1 cut(s) 372
NdeI CATATG 1 cut(s) 1377
NdeII GATC 5 cut(s) 768, 775, 811, 985, 1186
NlaIII CATG 7 cut(s) 355, 422, 485, 490, 975, 1004, 1580
NlaIV GGNNCC 6 cut(s) 34, 369, 396, 473, 1093, 1261
NmuCI GTSAC 3 cut(s) 253, 496, 674
NspI RCATGY 2 cut(s) 485, 1580
PaeI GCATGC 1 cut(s) 1580
PagI TCATGA 1 cut(s) 351
PceI AGGCCT 1 cut(s) 560
PctI GAATGC 1 cut(s) 1025
PdmI GAANNNNTTC 2 cut(s) 987, 1077
PfeI GAWTC 6 cut(s) 455, 625, 821, 968, 1115, 1585
PflFI GACNNNGTC 1 cut(s) 521
PfoI TCCNGGA 2 cut(s) 370, 1134
PkrI GCNGC 5 cut(s) 448, 719, 1168, 1251, 1431
PleI GAGTC 5 cut(s) 24, 423, 512, 1055, 1398
PpsI GAGTC 5 cut(s) 24, 423, 512, 1055, 1398
PpuMI RGGWCCY 1 cut(s) 471
PshAI GACNNNNGTC 1 cut(s) 759
Psp124BI GAGCTC 1 cut(s) 9
Psp5II RGGWCCY 1 cut(s) 471
Psp6I CCWGG 4 cut(s) 382, 898, 1084, 1134
PspGI CCWGG 4 cut(s) 382, 898, 1084, 1134
PspN4I GGNNCC 6 cut(s) 34, 369, 396, 473, 1093, 1261
PspPI GGNCC 1 cut(s) 471
PspPPI RGGWCCY 1 cut(s) 471
PstI CTGCAG 1 cut(s) 451
PstNI CAGNNNCTG 1 cut(s) 1393
PsuI RGATCY 1 cut(s) 985
PsyI GACNNNGTC 1 cut(s) 521
PvuII CAGCTG 1 cut(s) 1169
RsaI GTAC 2 cut(s) 303, 438
RsaNI GTAC 2 cut(s) 302, 437
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 4 cut(s) 285, 710, 831, 1295
SatI GCNGC 5 cut(s) 447, 718, 1167, 1250, 1430
Sau3AI GATC 5 cut(s) 768, 775, 811, 985, 1186
Sau96I GGNCC 1 cut(s) 471
SchI GAGTC 5 cut(s) 25, 424, 512, 1055, 1399
ScrFI CCNGG 5 cut(s) 372, 384, 900, 1086, 1136
SduI GDGCHC 1 cut(s) 9
SfcI CTRYAG 3 cut(s) 447, 764, 1335
SinI GGWCC 1 cut(s) 471
SphI GCATGC 1 cut(s) 1580
SseBI AGGCCT 1 cut(s) 560
SsiI CCGC 4 cut(s) 145, 242, 718, 846
SspMI CTAG 4 cut(s) 731, 1155, 1184, 1599
SstI GAGCTC 1 cut(s) 9
StuI AGGCCT 1 cut(s) 560
StyD4I CCNGG 5 cut(s) 370, 382, 898, 1084, 1134
StyI CCWWGG 2 cut(s) 363, 730
TaaI ACNGT 2 cut(s) 326, 674
TaiI ACGT 3 cut(s) 54, 1420, 1489
TaqI TCGA 2 cut(s) 914, 991
TaqII GACCGA 1 cut(s) 484
TatI WGTACW 1 cut(s) 436
TauI GCSGC 1 cut(s) 720
TfiI GAWTC 6 cut(s) 455, 625, 821, 968, 1115, 1585
Tru1I TTAA 4 cut(s) 285, 710, 831, 1295
Tru9I TTAA 4 cut(s) 285, 710, 831, 1295
TscAI CASTG 2 cut(s) 679, 960
TseFI GTSAC 3 cut(s) 253, 496, 674
TseI GCWGC 4 cut(s) 446, 1166, 1249, 1429
Tsp45I GTSAC 3 cut(s) 253, 496, 674
TspDTI ATGAA 7 cut(s) 340, 368, 726, 834, 989, 1314, 1521
TspGWI ACGGA 2 cut(s) 515, 890
TspRI CASTG 2 cut(s) 679, 960
Tth111I GACNNNGTC 1 cut(s) 521
VpaK11BI GGWCC 1 cut(s) 471
XagI CCTNNNNNAGG 1 cut(s) 1103
XapI RAATTY 6 cut(s) 646, 924, 996, 1130, 1465, 1478
XbaI TCTAGA 1 cut(s) 1183
XceI RCATGY 2 cut(s) 485, 1580
XmaJI CCTAGG 1 cut(s) 730
XmiI GTMKAC 1 cut(s) 763
XmnI GAANNNNTTC 2 cut(s) 987, 1077
XspI CTAG 4 cut(s) 731, 1155, 1184, 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.