Aldehyde dehydrogenase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34240 AT4G34240 AT4G34240 AT4G34240 |
| fragaria_vesca | FvH4_1g25230 FvH4_1g25230 FvH4_1g25230 FvH4_1g25230 FvH4_1g25230 |
| malus_domestica | MD15G1136900.v1.1 MD15G1137200.v1.1 |
| prunus_persica | Prupe.4G279800_v2.0.a1 Prupe.4G279800_v2.0.a1 Prupe.4G279800_v2.0.a1 Prupe.4G279800_v2.0.a1 Prupe.4G279800_v2.0.a1 |
| pyrus_communis | pycom15g12370 |
| rosa_chinensis | RchiOBHm_Chr2g0123141 |
| rosa_laevigata | RLG00000018731 |
| rosa_multiflora | Rmu_sc0005573.1_g000005 |
| rosa_roxburghii | Rroxscaffold_2G00120890 |
| rosa_rugosa | Rorug02G0243200 Rorug02G0243300 |
| rosa_samantha | Rh2AG302900 Rh2BG310700 Rh2CG289100 Rh2DG326900 |
| rosa_wichuraiana | Rw0G004910 Rw2G024200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1551 |
| AccB1I | GGYRCC | 1 cut(s) | 1551 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 593 |
| AciI | CCGC | 5 cut(s) | 53, 177, 250, 617, 1602 |
| AclI | AACGTT | 1 cut(s) | 1096 |
| AclWI | GGATC | 2 cut(s) | 578, 1037 |
| AcsI | RAATTY | 3 cut(s) | 1051, 1297, 1478 |
| AcuI | CTGAAG | 4 cut(s) | 372, 402, 618, 1370 |
| AfaI | GTAC | 2 cut(s) | 58, 1553 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 593, 1439, 1491, 1507 |
| AflIII | ACRYGT | 1 cut(s) | 1411 |
| AgsI | TTSAA | 9 cut(s) | 214, 262, 329, 486, 934, 1019, 1056, 1277, 1302 |
| AjnI | CCWGG | 2 cut(s) | 1067, 1623 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 119, 151 |
| Alw26I | GTCTC | 4 cut(s) | 445, 1132, 1218, 1262 |
| AlwI | GGATC | 2 cut(s) | 578, 1037 |
| AoxI | GGCC | 3 cut(s) | 1150, 1241, 1304 |
| ApeKI | GCWGC | 6 cut(s) | 66, 247, 809, 812, 815, 1345 |
| ApoI | RAATTY | 3 cut(s) | 1051, 1297, 1478 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 257, 1462 |
| Asp718I | GGTACC | 1 cut(s) | 1551 |
| AspLEI | GCGC | 1 cut(s) | 798 |
| AspS9I | GGNCC | 2 cut(s) | 367, 1241 |
| AsuC2I | CCSGG | 1 cut(s) | 863 |
| AsuHPI | GGTGA | 1 cut(s) | 1616 |
| AvaII | GGWCC | 1 cut(s) | 367 |
| BanI | GGYRCC | 1 cut(s) | 1551 |
| BbsI | GAAGAC | 1 cut(s) | 1284 |
| BbvI | GCAGC | 6 cut(s) | 78, 234, 796, 799, 802, 1357 |
| BccI | CCATC | 4 cut(s) | 508, 799, 1484, 1632 |
| BciT130I | CCWGG | 2 cut(s) | 1069, 1625 |
| BclI | TGATCA | 1 cut(s) | 1596 |
| BcnI | CCSGG | 1 cut(s) | 863 |
| BcoDI | GTCTC | 4 cut(s) | 445, 1132, 1218, 1262 |
| BfaI | CTAG | 4 cut(s) | 60, 236, 530, 842 |
| BisI | GCNGC | 6 cut(s) | 67, 248, 810, 813, 816, 1346 |
| BlsI | GCNGC | 6 cut(s) | 68, 249, 811, 814, 817, 1347 |
| Bme1390I | CCNGG | 3 cut(s) | 863, 1069, 1625 |
| Bme18I | GGWCC | 1 cut(s) | 367 |
| BmgT120I | GGNCC | 2 cut(s) | 367, 1241 |
| BmiI | GGNNCC | 1 cut(s) | 1553 |
| BmrFI | CCNGG | 3 cut(s) | 863, 1069, 1625 |
| BmrI | ACTGGG | 1 cut(s) | 1081 |
| BmsI | GCATC | 3 cut(s) | 121, 312, 1239 |
| BmuI | ACTGGG | 1 cut(s) | 1081 |
| BpiI | GAAGAC | 1 cut(s) | 1284 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1374, 1406 |
| BpmI | CTGGAG | 2 cut(s) | 630, 1401 |
| BpuEI | CTTGAG | 2 cut(s) | 1043, 1571 |
| BpuMI | CCSGG | 1 cut(s) | 863 |
| BsaI | GGTCTC | 1 cut(s) | 1132 |
| BsaJI | CCNNGG | 5 cut(s) | 186, 861, 1068, 1144, 1471 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 593, 1439, 1491, 1507 |
| Bse1I | ACTGG | 4 cut(s) | 45, 587, 1087, 1429 |
| Bse3DI | GCAATG | 2 cut(s) | 312, 619 |
| BseBI | CCWGG | 2 cut(s) | 1069, 1625 |
| BseDI | CCNNGG | 5 cut(s) | 186, 861, 1068, 1144, 1471 |
| BseGI | GGATG | 4 cut(s) | 465, 1120, 1165, 1643 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 593, 1439, 1491, 1507 |
| BseMI | GCAATG | 2 cut(s) | 312, 619 |
| BseMII | CTCAG | 2 cut(s) | 1229, 1538 |
| BseNI | ACTGG | 4 cut(s) | 45, 587, 1087, 1429 |
| BseRI | GAGGAG | 3 cut(s) | 695, 1244, 1455 |
| BseXI | GCAGC | 6 cut(s) | 78, 234, 796, 799, 802, 1357 |
| BsgI | GTGCAG | 1 cut(s) | 723 |
| BshFI | GGCC | 3 cut(s) | 1152, 1243, 1306 |
| BshNI | GGYRCC | 1 cut(s) | 1551 |
| BsiSI | CCGG | 1 cut(s) | 863 |
| BslFI | GGGAC | 1 cut(s) | 844 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 593, 1439, 1491, 1507 |
| BsmAI | GTCTC | 4 cut(s) | 445, 1132, 1218, 1262 |
| BsmBI | CGTCTC | 1 cut(s) | 1262 |
| BsmFI | GGGAC | 1 cut(s) | 844 |
| BsmI | GAATGC | 1 cut(s) | 1392 |
| BsnI | GGCC | 3 cut(s) | 1152, 1243, 1306 |
| Bso31I | GGTCTC | 1 cut(s) | 1132 |
| Bsp143I | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| Bsp19I | CCATGG | 1 cut(s) | 1471 |
| BspACI | CCGC | 5 cut(s) | 53, 177, 250, 617, 1602 |
| BspANI | GGCC | 3 cut(s) | 1152, 1243, 1306 |
| BspCNI | CTCAG | 2 cut(s) | 1228, 1539 |
| BspLI | GGNNCC | 1 cut(s) | 1553 |
| BspPI | GGATC | 2 cut(s) | 578, 1037 |
| BspT107I | GGYRCC | 1 cut(s) | 1551 |
| BspTNI | GGTCTC | 1 cut(s) | 1132 |
| BsrDI | GCAATG | 2 cut(s) | 312, 619 |
| BsrI | ACTGG | 4 cut(s) | 45, 587, 1087, 1429 |
| BssECI | CCNNGG | 5 cut(s) | 186, 861, 1068, 1144, 1471 |
| BssMI | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| BssT1I | CCWWGG | 1 cut(s) | 1471 |
| Bst2UI | CCWGG | 2 cut(s) | 1069, 1625 |
| Bst4CI | ACNGT | 6 cut(s) | 257, 303, 456, 1264, 1283, 1405 |
| Bst6I | CTCTTC | 3 cut(s) | 145, 324, 1203 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1582 |
| BstC8I | GCNNGC | 3 cut(s) | 229, 233, 610 |
| BstDEI | CTNAG | 2 cut(s) | 1215, 1547 |
| BstDSI | CCRYGG | 1 cut(s) | 1471 |
| BstF5I | GGATG | 4 cut(s) | 465, 1120, 1165, 1643 |
| BstHHI | GCGC | 1 cut(s) | 798 |
| BstKTI | GATC | 4 cut(s) | 22, 586, 1045, 1599 |
| BstMAI | GTCTC | 4 cut(s) | 445, 1132, 1218, 1262 |
| BstMBI | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 605, 614, 815, 1249, 1582 |
| BstNI | CCWGG | 2 cut(s) | 1069, 1625 |
| BstNSI | RCATGY | 1 cut(s) | 1415 |
| BstSCI | CCNGG | 3 cut(s) | 861, 1067, 1623 |
| BstV1I | GCAGC | 6 cut(s) | 78, 234, 796, 799, 802, 1357 |
| BstV2I | GAAGAC | 1 cut(s) | 1284 |
| BstX2I | RGATCY | 1 cut(s) | 1042 |
| BstYI | RGATCY | 1 cut(s) | 1042 |
| BsuRI | GGCC | 3 cut(s) | 1152, 1243, 1306 |
| BtgI | CCRYGG | 1 cut(s) | 1471 |
| BtgZI | GCGATG | 1 cut(s) | 532 |
| BtsCI | GGATG | 4 cut(s) | 465, 1120, 1165, 1643 |
| BtsI | GCAGTG | 3 cut(s) | 43, 1326, 1599 |
| BtsIMutI | CAGTG | 6 cut(s) | 43, 437, 461, 1260, 1326, 1599 |
| Cac8I | GCNNGC | 3 cut(s) | 229, 233, 610 |
| CfoI | GCGC | 1 cut(s) | 798 |
| Cfr13I | GGNCC | 2 cut(s) | 367, 1241 |
| CseI | GACGC | 1 cut(s) | 118 |
| Csp6I | GTAC | 2 cut(s) | 57, 1552 |
| CviAII | CATG | 4 cut(s) | 426, 555, 1412, 1472 |
| CviQI | GTAC | 2 cut(s) | 57, 1552 |
| DdeI | CTNAG | 2 cut(s) | 1215, 1547 |
| DpnI | GATC | 4 cut(s) | 21, 585, 1044, 1598 |
| DpnII | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| DraI | TTTAAA | 1 cut(s) | 1093 |
| Eam1104I | CTCTTC | 3 cut(s) | 145, 324, 1203 |
| EarI | CTCTTC | 3 cut(s) | 145, 324, 1203 |
| Eco130I | CCWWGG | 1 cut(s) | 1471 |
| Eco31I | GGTCTC | 1 cut(s) | 1132 |
| Eco32I | GATATC | 1 cut(s) | 1201 |
| Eco47I | GGWCC | 1 cut(s) | 367 |
| Eco57I | CTGAAG | 4 cut(s) | 372, 402, 618, 1370 |
| EcoO109I | RGGNCCY | 1 cut(s) | 367 |
| EcoRI | GAATTC | 1 cut(s) | 1051 |
| EcoRII | CCWGG | 2 cut(s) | 1067, 1623 |
| EcoRV | GATATC | 1 cut(s) | 1201 |
| EcoT14I | CCWWGG | 1 cut(s) | 1471 |
| EcoT22I | ATGCAT | 1 cut(s) | 17 |
| ErhI | CCWWGG | 1 cut(s) | 1471 |
| Esp3I | CGTCTC | 1 cut(s) | 1262 |
| FaeI | CATG | 4 cut(s) | 429, 558, 1415, 1475 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1343, 1375 |
| FaqI | GGGAC | 1 cut(s) | 844 |
| FatI | CATG | 4 cut(s) | 425, 554, 1411, 1471 |
| FauI | CCCGC | 1 cut(s) | 46 |
| FbaI | TGATCA | 1 cut(s) | 1596 |
| Fnu4HI | GCNGC | 6 cut(s) | 67, 248, 810, 813, 816, 1346 |
| FokI | GGATG | 3 cut(s) | 472, 1127, 1172 |
| Fsp4HI | GCNGC | 6 cut(s) | 67, 248, 810, 813, 816, 1346 |
| FspBI | CTAG | 4 cut(s) | 60, 236, 530, 842 |
| GlaI | GCGC | 1 cut(s) | 797 |
| GluI | GCNGC | 6 cut(s) | 67, 248, 810, 813, 816, 1346 |
| GsuI | CTGGAG | 2 cut(s) | 630, 1401 |
| HaeIII | GGCC | 3 cut(s) | 1152, 1243, 1306 |
| HapII | CCGG | 1 cut(s) | 863 |
| HgaI | GACGC | 1 cut(s) | 118 |
| HhaI | GCGC | 1 cut(s) | 798 |
| Hin1II | CATG | 4 cut(s) | 429, 558, 1415, 1475 |
| Hin6I | GCGC | 1 cut(s) | 796 |
| HinP1I | GCGC | 1 cut(s) | 796 |
| HincII | GTYRAC | 1 cut(s) | 478 |
| HindII | GTYRAC | 1 cut(s) | 478 |
| HindIII | AAGCTT | 1 cut(s) | 945 |
| HinfI | GANTC | 3 cut(s) | 463, 1211, 1538 |
| HpaII | CCGG | 1 cut(s) | 863 |
| HphI | GGTGA | 1 cut(s) | 1616 |
| Hpy166II | GTNNAC | 2 cut(s) | 478, 1430 |
| Hpy188III | TCNNGA | 6 cut(s) | 218, 267, 373, 728, 842, 1380 |
| Hpy8I | GTNNAC | 2 cut(s) | 478, 1430 |
| HpyAV | CCTTC | 5 cut(s) | 264, 577, 642, 1348, 1501 |
| HpyCH4III | ACNGT | 6 cut(s) | 257, 303, 456, 1264, 1283, 1405 |
| HpyCH4IV | ACGT | 1 cut(s) | 1096 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 605, 614, 815, 1249, 1582 |
| HpyF3I | CTNAG | 2 cut(s) | 1215, 1547 |
| HpySE526I | ACGT | 1 cut(s) | 1096 |
| Hsp92II | CATG | 4 cut(s) | 429, 558, 1415, 1475 |
| HspAI | GCGC | 1 cut(s) | 796 |
| KpnI | GGTACC | 1 cut(s) | 1555 |
| Ksp22I | TGATCA | 1 cut(s) | 1596 |
| Kzo9I | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| LmnI | GCTCC | 6 cut(s) | 63, 244, 596, 649, 994, 1186 |
| Lsp1109I | GCAGC | 6 cut(s) | 78, 234, 796, 799, 802, 1357 |
| LweI | GCATC | 3 cut(s) | 121, 312, 1239 |
| MaeI | CTAG | 4 cut(s) | 60, 236, 530, 842 |
| MaeII | ACGT | 1 cut(s) | 1096 |
| MaeIII | GTNAC | 6 cut(s) | 181, 297, 409, 428, 1258, 1604 |
| MalI | GATC | 4 cut(s) | 21, 585, 1044, 1598 |
| MboI | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| MboII | GAAGA | 7 cut(s) | 132, 209, 341, 648, 1220, 1289, 1363 |
| MflI | RGATCY | 1 cut(s) | 1042 |
| MlyI | GAGTC | 1 cut(s) | 1220 |
| MmeI | TCCRAC | 3 cut(s) | 285, 1092, 1208 |
| Mph1103I | ATGCAT | 1 cut(s) | 17 |
| MroXI | GAANNNNTTC | 2 cut(s) | 257, 1462 |
| MseI | TTAA | 5 cut(s) | 27, 77, 240, 1092, 1172 |
| MslI | CAYNNNNRTG | 2 cut(s) | 803, 879 |
| MspA1I | CMGCKG | 5 cut(s) | 179, 608, 701, 1348, 1602 |
| MspI | CCGG | 1 cut(s) | 863 |
| MspR9I | CCNGG | 3 cut(s) | 863, 1069, 1625 |
| MssI | GTTTAAAC | 1 cut(s) | 1093 |
| Mva1269I | GAATGC | 1 cut(s) | 1392 |
| MvaI | CCWGG | 2 cut(s) | 1069, 1625 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 605, 614, 815, 1249, 1582 |
| NciI | CCSGG | 1 cut(s) | 863 |
| NcoI | CCATGG | 1 cut(s) | 1471 |
| NdeII | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| NlaIII | CATG | 4 cut(s) | 429, 558, 1415, 1475 |
| NlaIV | GGNNCC | 1 cut(s) | 1553 |
| NmuCI | GTSAC | 3 cut(s) | 297, 1258, 1604 |
| NsiI | ATGCAT | 1 cut(s) | 17 |
| NspI | RCATGY | 1 cut(s) | 1415 |
| PciI | ACATGT | 1 cut(s) | 1411 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 272 |
| PctI | GAATGC | 1 cut(s) | 1392 |
| PdmI | GAANNNNTTC | 2 cut(s) | 257, 1462 |
| PfeI | GAWTC | 2 cut(s) | 463, 1538 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 593 |
| PkrI | GCNGC | 6 cut(s) | 68, 249, 811, 814, 817, 1347 |
| PleI | GAGTC | 1 cut(s) | 1219 |
| PmeI | GTTTAAAC | 1 cut(s) | 1093 |
| PpsI | GAGTC | 1 cut(s) | 1219 |
| PpuMI | RGGWCCY | 1 cut(s) | 367 |
| PscI | ACATGT | 1 cut(s) | 1411 |
| Psp1406I | AACGTT | 1 cut(s) | 1096 |
| Psp5II | RGGWCCY | 1 cut(s) | 367 |
| Psp6I | CCWGG | 2 cut(s) | 1067, 1623 |
| PspGI | CCWGG | 2 cut(s) | 1067, 1623 |
| PspN4I | GGNNCC | 1 cut(s) | 1553 |
| PspPI | GGNCC | 2 cut(s) | 367, 1241 |
| PspPPI | RGGWCCY | 1 cut(s) | 367 |
| PsuI | RGATCY | 1 cut(s) | 1042 |
| PvuII | CAGCTG | 3 cut(s) | 608, 701, 1348 |
| RsaI | GTAC | 2 cut(s) | 58, 1553 |
| RsaNI | GTAC | 2 cut(s) | 57, 1552 |
| RseI | CAYNNNNRTG | 2 cut(s) | 803, 879 |
| SaqAI | TTAA | 5 cut(s) | 27, 77, 240, 1092, 1172 |
| SatI | GCNGC | 6 cut(s) | 67, 248, 810, 813, 816, 1346 |
| Sau3AI | GATC | 4 cut(s) | 19, 583, 1042, 1596 |
| Sau96I | GGNCC | 2 cut(s) | 367, 1241 |
| SchI | GAGTC | 1 cut(s) | 1220 |
| ScrFI | CCNGG | 3 cut(s) | 863, 1069, 1625 |
| SfaNI | GCATC | 3 cut(s) | 121, 312, 1239 |
| SinI | GGWCC | 1 cut(s) | 367 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 803, 879 |
| SmlI | CTYRAG | 2 cut(s) | 1022, 1586 |
| SmoI | CTYRAG | 2 cut(s) | 1022, 1586 |
| SsiI | CCGC | 5 cut(s) | 53, 177, 250, 617, 1602 |
| SspMI | CTAG | 4 cut(s) | 60, 236, 530, 842 |
| StyD4I | CCNGG | 3 cut(s) | 861, 1067, 1623 |
| StyI | CCWWGG | 1 cut(s) | 1471 |
| TaaI | ACNGT | 6 cut(s) | 257, 303, 456, 1264, 1283, 1405 |
| TaiI | ACGT | 1 cut(s) | 1099 |
| TaqI | TCGA | 3 cut(s) | 374, 387, 885 |
| TfiI | GAWTC | 2 cut(s) | 463, 1538 |
| Tru1I | TTAA | 5 cut(s) | 27, 77, 240, 1092, 1172 |
| Tru9I | TTAA | 5 cut(s) | 27, 77, 240, 1092, 1172 |
| TscAI | CASTG | 6 cut(s) | 43, 444, 461, 1267, 1326, 1599 |
| TseFI | GTSAC | 3 cut(s) | 297, 1258, 1604 |
| TseI | GCWGC | 6 cut(s) | 66, 247, 809, 812, 815, 1345 |
| Tsp45I | GTSAC | 3 cut(s) | 297, 1258, 1604 |
| TspDTI | ATGAA | 4 cut(s) | 17, 1064, 1455, 1530 |
| TspRI | CASTG | 6 cut(s) | 43, 444, 461, 1267, 1326, 1599 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 593 |
| VpaK11BI | GGWCC | 1 cut(s) | 367 |
| XapI | RAATTY | 3 cut(s) | 1051, 1297, 1478 |
| XbaI | TCTAGA | 1 cut(s) | 841 |
| XceI | RCATGY | 1 cut(s) | 1415 |
| XmnI | GAANNNNTTC | 2 cut(s) | 257, 1462 |
| XspI | CTAG | 4 cut(s) | 60, 236, 530, 842 |
| Zsp2I | ATGCAT | 1 cut(s) | 17 |