Prupe.5G021100_v2.0.a1

Putative S-adenosyl-L-methionine-dependent methyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
2311783 .. 2315480
3698 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G021100.1

Sequence Viewer

Length: 1803 bp
ATGAAGCATAAAGATGGAAAACCAGGACCCCAAGGTACCAGGGTTTTCCCCATGGCAATCTTGTTTGTTGTGCTATGCGGGTTTTCATTCTATCTTGGTGGAATCTTCTGTTCTGAGAGGAACAGAATTGAGCCTTCTGATGTCAAAGATGTCACAAAGGCAGTTCGATCATCCAAGGAGTCACTTGTGGCCCCTCTCCAAATAAAAACTGTTTCCTTTGCTGAATGCAGCAGTGACTATCAAGACTACACCCCATGCACAGATCCAAGGAGGTGGAAAAAATATGGTGTTCATCGGCTTACTTTCATGGAACGCCACTGCCCTCCAGTATTTGAAAGGAAAGAGTGCTTAGTTCCACCTCCAGATGGGTATAAGCTACCAATCAGATGGCCAAATAGCAGGGATGAATGTTGGTACAGGAATGTGCCATATGATTGGATTAACAAGCAGAAATCTAATCAGAATTGGCTAAGAAAAGAAGGGGAGAAGTTTCTCTTTCCTGGTGGAGGAACTATGTTTCCTAGAGGTGTATCTGCATATGTCTATTTGATGCAAGATCTTATTCCAGAAATGAAAGATGGGACTGTTCGAACTGCCATTGATACTGGGTGTGGGGTTGCAAGTTGGGGAGGTGATTTGCTAGATCGGGGGATTTTAACAGTTTCTCTCGCCCCAAGAGATAATCATGAAGCTCAAGTTCAGTTTGCCTTGGAACGTGGAATTCCAGCAATCCTTGGCATCATTTCTACACAGAGGCTTCCTTTCCCCTCAAACTCGTTTGATATGGCTCACTGCTCAAGGTGCCTCATCCCATGGACGGAATTTGGCGGAATTTACCTTCTTGAAATTCATCGTATACTCCGCCCTGGAGGTTTCTGGGTCCTGTCTGGTCCACCTGTCAACTATGAAAACCGCTGGCGTGGATGGAACACAACCATAGAAGAGCAGAAATCAGATTATGACAAGTTGCAAGAACTGCTAACTTCATTGTGCTTCAAATTGTATAACAAAAAGGATGATATCGCTGTTTGGAAGAAATTGTCAGATGATAGTTGCTACAATAAACTTAATGAGCCAGATGTCTATCCTCCGAAGTGTGATGATAGCCTTGAACCAGACTCAGGATGGTACACGCCATTACGCTCTTGTGTTGTCGTTCCTGACCCAAAGCTAAAAAAGTCAGCTTTGAAATCCATCCCTAGATGGCCAGAGCGATTGCATGTTGCACCAGATCGTATTTCCGATGTGCATGGTGGGAGTGCTAGTGCTTTTAAGCATGATGACAGCAAGTGGAGGGTACGATTGAAGCACTACAAGAAGTTGCTCCCAGCAATTGGGACAGATAAGATCAGAAATGTTATGGACATGAACACAGTATATGGAGGTTTTGCTGCGGGGATGATTGATTATCCTTTGTGGGTCATGAATGTGGTCTCTTCCTATGCTGCAAATACACTGCCAGTGGTCTATGATCGGGGCCTTATTGGAACTTACCATGATTGGTGTGAAGCTTTTTCTACATATCCCCGAACTTATGATCTTCTACATCTTGATGGCCTCTTTACTGCAGAAAGCCACAGATGCGAAATGAAATATGTACTCCTAGAGATGGACCGAATCCTGCGCCCCAACGGGTATGCAATAGTTCGAGAATCCAGCTACTTTGTGGATGCTGTTGCGACTATTGCCAAAGGCATGAGATGGGGTTGTCGCAAAGAAGATACTGAGTATGGTATAGGGAAGGAGAAAGTATTGATATGTCAGAAAAAACTCTGGTACTCATCGAATCGGACTTCTAGATGA

Protein Analysis

601

Amino Acids

68.81

Weight (kDa)

8.79

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 35
AccB1I GGYRCC 2 cut(s) 35, 801
AccB7I CCANNNNNTGG 1 cut(s) 1334
AccI GTMKAC 1 cut(s) 856
AciI CCGC 5 cut(s) 78, 828, 862, 913, 1394
AclWI GGATC 1 cut(s) 257
AcoI YGGCCR 2 cut(s) 389, 1205
AcsI RAATTY 4 cut(s) 720, 821, 831, 846
AfaI GTAC 6 cut(s) 37, 416, 1130, 1299, 1599, 1778
AfiI CCNNNNNNNGG 6 cut(s) 365, 506, 817, 1121, 1334, 1609
AgsI TTSAA 6 cut(s) 335, 845, 997, 1112, 1189, 1306
AjnI CCWGG 4 cut(s) 22, 38, 499, 865
AloI GAACNNNNNNTCC 2 cut(s) 502, 534
AluBI AGCT 6 cut(s) 376, 692, 1171, 1184, 1511, 1659
AluI AGCT 6 cut(s) 376, 692, 1171, 1184, 1511, 1659
Alw26I GTCTC 1 cut(s) 1438
AlwI GGATC 1 cut(s) 257
AoxI GGCC 5 cut(s) 189, 389, 1205, 1477, 1555
ApeKI GCWGC 3 cut(s) 228, 1391, 1445
ApoI RAATTY 4 cut(s) 720, 821, 831, 846
Asp718I GGTACC 1 cut(s) 35
AspLEI GCGC 1 cut(s) 1626
AspS9I GGNCC 6 cut(s) 26, 190, 880, 890, 1477, 1612
AsuHPI GGTGA 1 cut(s) 644
AsuII TTCGAA 1 cut(s) 589
AvaII GGWCC 4 cut(s) 26, 880, 890, 1612
BaeI ACNNNNGTAYC 2 cut(s) 27, 60
BalI TGGCCA 2 cut(s) 391, 1207
BanI GGYRCC 2 cut(s) 35, 801
BbvI GCAGC 3 cut(s) 240, 1378, 1432
BciT130I CCWGG 4 cut(s) 24, 40, 501, 867
BcoDI GTCTC 1 cut(s) 1438
BfaI CTAG 6 cut(s) 522, 641, 1200, 1263, 1604, 1797
BfmI CTRYAG 1 cut(s) 1566
BglII AGATCT 1 cut(s) 556
BisI GCNGC 3 cut(s) 229, 1392, 1446
BlsI GCNGC 3 cut(s) 230, 1393, 1447
Bme1390I CCNGG 4 cut(s) 24, 40, 501, 867
Bme18I GGWCC 4 cut(s) 26, 880, 890, 1612
BmgT120I GGNCC 6 cut(s) 26, 190, 880, 890, 1477, 1612
BmiI GGNNCC 6 cut(s) 28, 37, 192, 803, 881, 1478
BmrFI CCNGG 4 cut(s) 24, 40, 501, 867
BmrI ACTGGG 1 cut(s) 615
BmsI GCATC 4 cut(s) 540, 747, 1571, 1660
BmuI ACTGGG 1 cut(s) 615
BpmI CTGGAG 3 cut(s) 309, 345, 888
Bpu14I TTCGAA 1 cut(s) 589
BpuEI CTTGAG 2 cut(s) 678, 781
BsaBI GATNNNNATC 1 cut(s) 1083
BsaI GGTCTC 1 cut(s) 1438
BsaJI CCNNGG 9 cut(s) 31, 39, 51, 174, 266, 708, 733, 812, 865
BsaXI ACNNNNNCTCC 2 cut(s) 1249, 1279
Bsc4I CCNNNNNNNGG 6 cut(s) 365, 506, 817, 1121, 1334, 1609
Bse1I ACTGG 3 cut(s) 326, 610, 1460
Bse8I GATNNNNATC 1 cut(s) 1083
BseBI CCWGG 4 cut(s) 24, 40, 501, 867
BseDI CCNNGG 9 cut(s) 31, 39, 51, 174, 266, 708, 733, 812, 865
BseGI GGATG 9 cut(s) 170, 409, 807, 929, 1021, 1130, 1194, 1404, 1675
BseJI GATNNNNATC 1 cut(s) 1083
BseLI CCNNNNNNNGG 6 cut(s) 365, 506, 817, 1121, 1334, 1609
BseMII CTCAG 3 cut(s) 105, 1134, 1716
BseNI ACTGG 3 cut(s) 326, 610, 1460
BseXI GCAGC 3 cut(s) 240, 1378, 1432
BseYI CCCAGC 1 cut(s) 1327
BshFI GGCC 5 cut(s) 191, 391, 1207, 1479, 1557
BshNI GGYRCC 2 cut(s) 35, 801
BslFI GGGAC 2 cut(s) 595, 1351
BslI CCNNNNNNNGG 6 cut(s) 365, 506, 817, 1121, 1334, 1609
BsmAI GTCTC 1 cut(s) 1438
BsmFI GGGAC 2 cut(s) 595, 1351
BsmI GAATGC 1 cut(s) 230
BsnI GGCC 5 cut(s) 191, 391, 1207, 1479, 1557
Bso31I GGTCTC 1 cut(s) 1438
Bsp119I TTCGAA 1 cut(s) 589
Bsp143I GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
Bsp19I CCATGG 2 cut(s) 51, 812
BspACI CCGC 5 cut(s) 78, 828, 862, 913, 1394
BspANI GGCC 5 cut(s) 191, 391, 1207, 1479, 1557
BspCNI CTCAG 3 cut(s) 106, 1133, 1717
BspHI TCATGA 2 cut(s) 685, 1422
BspLI GGNNCC 6 cut(s) 28, 37, 192, 803, 881, 1478
BspMAI CTGCAG 1 cut(s) 1570
BspPI GGATC 1 cut(s) 257
BspQI GCTCTTC 1 cut(s) 936
BspT104I TTCGAA 1 cut(s) 589
BspT107I GGYRCC 2 cut(s) 35, 801
BspTNI GGTCTC 1 cut(s) 1438
BsrI ACTGG 3 cut(s) 326, 610, 1460
BssECI CCNNGG 9 cut(s) 31, 39, 51, 174, 266, 708, 733, 812, 865
BssMI GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
BssNAI GTATAC 1 cut(s) 857
BssT1I CCWWGG 7 cut(s) 31, 51, 174, 266, 708, 733, 812
Bst1107I GTATAC 1 cut(s) 857
Bst2UI CCWGG 4 cut(s) 24, 40, 501, 867
Bst4CI ACNGT 4 cut(s) 211, 586, 661, 1375
Bst6I CTCTTC 2 cut(s) 936, 1441
BstAPI GCANNNNNTGC 1 cut(s) 976
BstBI TTCGAA 1 cut(s) 589
BstC8I GCNNGC 1 cut(s) 917
BstDEI CTNAG 5 cut(s) 114, 349, 470, 1120, 1725
BstDSI CCRYGG 2 cut(s) 51, 812
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 9 cut(s) 170, 409, 807, 929, 1021, 1130, 1194, 1404, 1675
BstHHI GCGC 1 cut(s) 1626
BstKTI GATC 8 cut(s) 170, 265, 559, 646, 1234, 1350, 1474, 1540
BstMAI GTCTC 1 cut(s) 1438
BstMBI GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
BstMWI GCNNNNNNNGC 4 cut(s) 801, 976, 1581, 1685
BstNI CCWGG 4 cut(s) 24, 40, 501, 867
BstNSI RCATGY 1 cut(s) 1223
BstSCI CCNGG 4 cut(s) 22, 38, 499, 865
BstSFI CTRYAG 1 cut(s) 1566
BstV1I GCAGC 3 cut(s) 240, 1378, 1432
BstX2I RGATCY 2 cut(s) 262, 556
BstXI CCANNNNNNTGG 3 cut(s) 273, 387, 435
BstYI RGATCY 2 cut(s) 262, 556
BstZ17I GTATAC 1 cut(s) 857
BsuRI GGCC 5 cut(s) 191, 391, 1207, 1479, 1557
BtgI CCRYGG 2 cut(s) 51, 812
BtsCI GGATG 9 cut(s) 170, 409, 807, 929, 1021, 1130, 1194, 1404, 1675
BtsI GCAGTG 4 cut(s) 238, 316, 790, 1454
BtsIMutI CAGTG 5 cut(s) 238, 316, 790, 1454, 1467
Cac8I GCNNGC 1 cut(s) 917
CciI TCATGA 2 cut(s) 685, 1422
CfoI GCGC 1 cut(s) 1626
Cfr13I GGNCC 6 cut(s) 26, 190, 880, 890, 1477, 1612
Csp6I GTAC 6 cut(s) 36, 415, 1129, 1298, 1598, 1777
CviQI GTAC 6 cut(s) 36, 415, 1129, 1298, 1598, 1777
DdeI CTNAG 5 cut(s) 114, 349, 470, 1120, 1725
DpnI GATC 8 cut(s) 169, 264, 558, 645, 1233, 1349, 1473, 1539
DpnII GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
EaeI YGGCCR 2 cut(s) 389, 1205
Eam1104I CTCTTC 2 cut(s) 936, 1441
EarI CTCTTC 2 cut(s) 936, 1441
EciI GGCGGA 2 cut(s) 843, 851
Eco130I CCWWGG 7 cut(s) 31, 51, 174, 266, 708, 733, 812
Eco31I GGTCTC 1 cut(s) 1438
Eco32I GATATC 1 cut(s) 1021
Eco47I GGWCC 4 cut(s) 26, 880, 890, 1612
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoO109I RGGNCCY 3 cut(s) 26, 880, 1477
EcoRI GAATTC 1 cut(s) 720
EcoRII CCWGG 4 cut(s) 22, 38, 499, 865
EcoRV GATATC 1 cut(s) 1021
EcoT14I CCWWGG 7 cut(s) 31, 51, 174, 266, 708, 733, 812
ErhI CCWWGG 7 cut(s) 31, 51, 174, 266, 708, 733, 812
FalI AAGNNNNNCTT 2 cut(s) 479, 511
FaqI GGGAC 2 cut(s) 595, 1351
FauI CCCGC 2 cut(s) 71, 1387
FauNDI CATATG 2 cut(s) 430, 538
FblI GTMKAC 1 cut(s) 856
Fnu4HI GCNGC 3 cut(s) 229, 1392, 1446
FokI GGATG 9 cut(s) 157, 416, 794, 936, 1028, 1137, 1181, 1411, 1682
Fsp4HI GCNGC 3 cut(s) 229, 1392, 1446
FspBI CTAG 6 cut(s) 522, 641, 1200, 1263, 1604, 1797
GlaI GCGC 1 cut(s) 1625
GluI GCNGC 3 cut(s) 229, 1392, 1446
GsaI CCCAGC 1 cut(s) 1331
GsuI CTGGAG 3 cut(s) 309, 345, 888
HaeIII GGCC 5 cut(s) 191, 391, 1207, 1479, 1557
HhaI GCGC 1 cut(s) 1626
Hin6I GCGC 1 cut(s) 1624
HinP1I GCGC 1 cut(s) 1624
HincII GTYRAC 1 cut(s) 901
HindII GTYRAC 1 cut(s) 901
HindIII AAGCTT 1 cut(s) 1509
HinfI GANTC 6 cut(s) 102, 179, 1118, 1617, 1652, 1786
HphI GGTGA 1 cut(s) 644
Hpy166II GTNNAC 4 cut(s) 857, 893, 901, 1131
Hpy8I GTNNAC 4 cut(s) 857, 893, 901, 1131
HpyAV CCTTC 4 cut(s) 144, 473, 848, 1735
HpyCH4III ACNGT 4 cut(s) 211, 586, 661, 1375
HpyCH4IV ACGT 1 cut(s) 715
HpyF10VI GCNNNNNNNGC 4 cut(s) 801, 976, 1581, 1685
HpyF3I CTNAG 5 cut(s) 114, 349, 470, 1120, 1725
HpySE526I ACGT 1 cut(s) 715
HspAI GCGC 1 cut(s) 1624
KpnI GGTACC 1 cut(s) 39
Kzo9I GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
LguI GCTCTTC 1 cut(s) 936
LmnI GCTCC 1 cut(s) 1329
Lsp1109I GCAGC 3 cut(s) 240, 1378, 1432
LweI GCATC 4 cut(s) 540, 747, 1571, 1660
MaeI CTAG 6 cut(s) 522, 641, 1200, 1263, 1604, 1797
MaeII ACGT 1 cut(s) 715
MaeIII GTNAC 3 cut(s) 151, 180, 233
MalI GATC 8 cut(s) 169, 264, 558, 645, 1233, 1349, 1473, 1539
MboI GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
MboII GAAGA 6 cut(s) 97, 953, 1045, 1428, 1532, 1730
MfeI CAATTG 1 cut(s) 1332
MflI RGATCY 2 cut(s) 262, 556
MlsI TGGCCA 2 cut(s) 391, 1207
MluCI AATT 9 cut(s) 126, 463, 720, 821, 831, 846, 998, 1037, 1332
MluNI TGGCCA 2 cut(s) 391, 1207
MlyI GAGTC 2 cut(s) 188, 1112
Mox20I TGGCCA 2 cut(s) 391, 1207
MscI TGGCCA 2 cut(s) 391, 1207
MseI TTAA 4 cut(s) 441, 656, 1068, 1272
MslI CAYNNNNRTG 3 cut(s) 12, 1427, 1551
Msp20I TGGCCA 2 cut(s) 391, 1207
MspA1I CMGCKG 1 cut(s) 915
MspR9I CCNGG 4 cut(s) 24, 40, 501, 867
MunI CAATTG 1 cut(s) 1332
Mva1269I GAATGC 1 cut(s) 230
MvaI CCWGG 4 cut(s) 24, 40, 501, 867
MwoI GCNNNNNNNGC 4 cut(s) 801, 976, 1581, 1685
NcoI CCATGG 2 cut(s) 51, 812
NdeI CATATG 2 cut(s) 430, 538
NdeII GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
NlaIV GGNNCC 6 cut(s) 28, 37, 192, 803, 881, 1478
NmuCI GTSAC 3 cut(s) 151, 180, 233
NspI RCATGY 1 cut(s) 1223
NspV TTCGAA 1 cut(s) 589
PagI TCATGA 2 cut(s) 685, 1422
PciSI GCTCTTC 1 cut(s) 936
PctI GAATGC 1 cut(s) 230
PfeI GAWTC 4 cut(s) 102, 1617, 1652, 1786
PflMI CCANNNNNTGG 1 cut(s) 1334
PkrI GCNGC 3 cut(s) 230, 1393, 1447
PleI GAGTC 2 cut(s) 187, 1112
PpsI GAGTC 2 cut(s) 187, 1112
PpuMI RGGWCCY 2 cut(s) 26, 880
Psp5II RGGWCCY 2 cut(s) 26, 880
Psp6I CCWGG 4 cut(s) 22, 38, 499, 865
PspFI CCCAGC 1 cut(s) 1327
PspGI CCWGG 4 cut(s) 22, 38, 499, 865
PspN4I GGNNCC 6 cut(s) 28, 37, 192, 803, 881, 1478
PspPI GGNCC 6 cut(s) 26, 190, 880, 890, 1477, 1612
PspPPI RGGWCCY 2 cut(s) 26, 880
PstI CTGCAG 1 cut(s) 1570
PsuI RGATCY 2 cut(s) 262, 556
RsaI GTAC 6 cut(s) 37, 416, 1130, 1299, 1599, 1778
RsaNI GTAC 6 cut(s) 36, 415, 1129, 1298, 1598, 1777
RseI CAYNNNNRTG 3 cut(s) 12, 1427, 1551
SapI GCTCTTC 1 cut(s) 936
SaqAI TTAA 4 cut(s) 441, 656, 1068, 1272
SatI GCNGC 3 cut(s) 229, 1392, 1446
Sau3AI GATC 8 cut(s) 167, 262, 556, 643, 1231, 1347, 1471, 1537
Sau96I GGNCC 6 cut(s) 26, 190, 880, 890, 1477, 1612
SchI GAGTC 2 cut(s) 188, 1112
ScrFI CCNGG 4 cut(s) 24, 40, 501, 867
SfaNI GCATC 4 cut(s) 540, 747, 1571, 1660
SfcI CTRYAG 1 cut(s) 1566
SfuI TTCGAA 1 cut(s) 589
SinI GGWCC 4 cut(s) 26, 880, 890, 1612
SmiMI CAYNNNNRTG 3 cut(s) 12, 1427, 1551
SmlI CTYRAG 2 cut(s) 693, 796
SmoI CTYRAG 2 cut(s) 693, 796
Sse9I AATT 9 cut(s) 126, 463, 720, 821, 831, 846, 998, 1037, 1332
SsiI CCGC 5 cut(s) 78, 828, 862, 913, 1394
SspMI CTAG 6 cut(s) 522, 641, 1200, 1263, 1604, 1797
StyD4I CCNGG 4 cut(s) 22, 38, 499, 865
StyI CCWWGG 7 cut(s) 31, 51, 174, 266, 708, 733, 812
TaaI ACNGT 4 cut(s) 211, 586, 661, 1375
TaiI ACGT 1 cut(s) 718
TaqI TCGA 4 cut(s) 166, 589, 1648, 1784
TaqII GACCGA 1 cut(s) 1629
TasI AATT 9 cut(s) 126, 463, 720, 821, 831, 846, 998, 1037, 1332
TatI WGTACW 1 cut(s) 1597
TfiI GAWTC 4 cut(s) 102, 1617, 1652, 1786
Tru1I TTAA 4 cut(s) 441, 656, 1068, 1272
Tru9I TTAA 4 cut(s) 441, 656, 1068, 1272
TscAI CASTG 5 cut(s) 238, 323, 797, 1461, 1467
TseFI GTSAC 3 cut(s) 151, 180, 233
TseI GCWGC 3 cut(s) 228, 1391, 1445
Tsp45I GTSAC 3 cut(s) 151, 180, 233
TspGWI ACGGA 1 cut(s) 833
TspRI CASTG 5 cut(s) 238, 323, 797, 1461, 1467
Van91I CCANNNNNTGG 1 cut(s) 1334
VpaK11BI GGWCC 4 cut(s) 26, 880, 890, 1612
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 4 cut(s) 720, 821, 831, 846
XbaI TCTAGA 1 cut(s) 1796
XceI RCATGY 1 cut(s) 1223
XcmI CCANNNNNNNNNTGG 2 cut(s) 1122, 1663
XmiI GTMKAC 1 cut(s) 856
XspI CTAG 6 cut(s) 522, 641, 1200, 1263, 1604, 1797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.