Prupe.5G024500_v2.0.a1

Plastidal glycolate glycerate translocator 1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
2754090 .. 2760249
6160 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G024500.1

Sequence Viewer

Length: 1569 bp
ATGTCTACCTTCTCAGCTACACCCTGTACACCCACCTCTCTCCTGAACCACCACAATTCATTATTCTATTTTCCAAGTTGCCTGCCTTCACTTTCAGTCTTTCAGAGAAGCCATCCCAAAAATTCTCCTGTTGCTTTCAATGGCGTCAGGTTACAACATAAGCAGGCTAATGTCCAAAATACAGTTCCTGGGGTGCTGAATTCCAGGTTCTTGCAAATTGGTTCTGAGGAAAGCTCCTCTAGTAGACATGTTTTAGTGAAATCAACTGGTGCAGAGAGTGCTGGCGGTTCCACTGTGTCTCAAAGTGTGCTTGGGATTTTGCATCTGATTGTTTCAGTTGGTATTATTCTTGCAATCGACAATTTTTTGAAACAAGCATTTGTGGCGGCTTCCATTAAGTTCCCCAGTGCGCTTTTTGGGATGTTTTGTATATTCTCCATTCTAATTATTCTTGATTCCACTGTTCCTGCTGTGGCAACAAGCTTGATGAACTTCTTTGAGCCGGCACTACTGTTCATCCAGAGATGGCTGCCATTGTTCTATGTTCCTTCTTTGGTTGTTTTGCCACTTTCTGTAAAAAGTATTCCCGCTGCTTCCGGCATCAAGATCTGCTATATTATAGTTGGAGGCTGGCTGGCTTCACTTGCTGTTGCAGGATATACAGCAATAGCTATTAGAAGAATGGTAAAGACAGAAATGACAGATGCTGAGCCTATGGGAAAACCCTCTCCATTTTCTGCGGTTGAAGTGTGGTCTTGGAGTGGGATCCTCCTGATATCATTTGTTTCTGCATTATTATATCCAACAGCCCTGGGGACAAGTGCTCGAACATGCCTTCCATTCCTACTTGCGTCAACTGTGTTGGGCTATATAGTTGGTTCTGGATTGCCATCAGATGTGAAGAAGGTTTTCCACCCGATTATTTGCTGTGCACTATCTGCAGATTTGGCAGCATTGGCTTTTGGATACTTCTCTAAGTCTGGGCTTGACTCTGTTCTTGGATCTTACCTTACAAAGGTTTCATCTAATCCTGGAGCTGGTGACGTTCTGATGGGATTCTTGGGGTCTGTTATCCTCTCATTTGCCTTCTCAATGTTCAAACAGAGGAAGCTAGTCAAGAGGCACGCAGCTGAGATTTTCACATCCGTCATCCTGTCAACCATATTCTCGTTGTATTCAACTGCTCTTGTTGGACGTCTTGTTGGGTTGGAACCTGGTTTGACTGTCTCAATTCTACCACGATGTATAACTGTGGCATTAGCACTCAGCATTGTGTCTTTGTTTGAAGGTACCAATCCATCGCTCACAGCCGCTGTGGTTGTGGTAACTGGTCTGGTTGGAGCTAATTTTGTGCAAGCAACACTTGATAAACTACAATTCCGTGATCCTATAGTTCGAGGGATAGCTACTGCATCTAGTGCTCATGGATTGGGAACGGCAGCATTGTCAGCCAAGGAACCCGAGGCCCTCCCATTTTGTGCCATTGCTTATGCTCTGAATGGTATATTTGGCTCTTTGCTTTGTTCAATTCCAGCAGTTAGGCAAAGCTTGCTTGCTGTAGTTGGATGA

Protein Analysis

523

Amino Acids

54.97

Weight (kDa)

9.28

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014623)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32080
fragaria_vesca FvH4_5g23540 FvH4_5g23540
malus_domestica MD06G1023600.v1.1
prunus_persica Prupe.5G024500_v2.0.a1
pyrus_communis pycom06g01920
rosa_chinensis RchiOBHm_Chr7g0212851
rosa_laevigata RLG00000002865
rosa_multiflora Rmu_sc0000394.1_g000049
rosa_roxburghii Rroxscaffold_3G00246510
rosa_rugosa Rorug07G0137000
rosa_samantha Rh7AG268600 Rh7BG264200 Rh7CG287600 Rh7DG276700
rosa_wichuraiana Rw7G023210 Rw7G023330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1198
Acc65I GGTACC 1 cut(s) 1289
AccB1I GGYRCC 1 cut(s) 1289
AccI GTMKAC 2 cut(s) 5, 244
AciI CCGC 5 cut(s) 285, 386, 588, 740, 1311
AclWI GGATC 4 cut(s) 760, 773, 1009, 1379
AcsI RAATTY 2 cut(s) 121, 199
AcyI GRCGYC 2 cut(s) 144, 1195
AfaI GTAC 2 cut(s) 28, 1291
AfiI CCNNNNNNNGG 2 cut(s) 1015, 1037
AflIII ACRYGT 1 cut(s) 247
AgsI TTSAA 7 cut(s) 139, 370, 746, 1099, 1179, 1286, 1527
AjnI CCWGG 5 cut(s) 187, 203, 810, 1030, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 168, 200
AloI GAACNNNNNNTCC 2 cut(s) 820, 852
Alw21I GWGCWC 3 cut(s) 826, 934, 1423
Alw26I GTCTC 2 cut(s) 303, 1231
Alw44I GTGCAC 1 cut(s) 930
AlwI GGATC 4 cut(s) 760, 773, 1009, 1379
AlwNI CAGNNNCTG 3 cut(s) 188, 707, 1313
Ama87I CYCGRG 1 cut(s) 1460
AoxI GGCC 1 cut(s) 1464
ApaLI GTGCAC 1 cut(s) 930
ApeKI GCWGC 5 cut(s) 529, 590, 950, 1127, 1439
ApoI RAATTY 2 cut(s) 121, 199
Asp700I GAANNNNTTC 1 cut(s) 908
Asp718I GGTACC 1 cut(s) 1289
AspLEI GCGC 1 cut(s) 412
AspS9I GGNCC 1 cut(s) 1465
AsuHPI GGTGA 1 cut(s) 1052
AvaI CYCGRG 1 cut(s) 1460
BaeGI GKGCMC 1 cut(s) 934
BamHI GGATCC 1 cut(s) 765
BanI GGYRCC 1 cut(s) 1289
Bbv12I GWGCWC 3 cut(s) 826, 934, 1423
BbvI GCAGC 5 cut(s) 516, 577, 962, 1139, 1451
BccI CCATC 5 cut(s) 120, 519, 898, 1045, 1306
BceAI ACGGC 1 cut(s) 1452
BciT130I CCWGG 5 cut(s) 189, 205, 812, 1032, 1215
BciVI GTATCC 1 cut(s) 959
BcoDI GTCTC 2 cut(s) 303, 1231
BfaI CTAG 3 cut(s) 240, 1112, 1416
BfmI CTRYAG 3 cut(s) 939, 1389, 1557
BfuI GTATCC 1 cut(s) 959
BglII AGATCT 1 cut(s) 606
BisI GCNGC 7 cut(s) 387, 530, 591, 951, 1128, 1311, 1440
BlpI GCTNAGC 1 cut(s) 708
BlsI GCNGC 7 cut(s) 388, 531, 592, 952, 1129, 1312, 1441
Bme1390I CCNGG 5 cut(s) 189, 205, 812, 1032, 1215
BmeT110I CYCGRG 1 cut(s) 1460
BmgT120I GGNCC 1 cut(s) 1465
BmiI GGNNCC 5 cut(s) 289, 767, 1212, 1291, 1458
BmrFI CCNGG 5 cut(s) 189, 205, 812, 1032, 1215
BmrI ACTGGG 1 cut(s) 399
BmsI GCATC 4 cut(s) 331, 609, 694, 1421
BmuI ACTGGG 1 cut(s) 399
BplI GAGNNNNNCTC 2 cut(s) 218, 250
BpmI CTGGAG 1 cut(s) 1053
Bpu1102I GCTNAGC 1 cut(s) 708
BsaBI GATNNNNATC 1 cut(s) 889
BsaHI GRCGYC 2 cut(s) 144, 1195
BsaJI CCNNGG 5 cut(s) 188, 810, 811, 1452, 1461
Bsc4I CCNNNNNNNGG 2 cut(s) 1015, 1037
Bse118I RCCGGY 1 cut(s) 502
Bse1I ACTGG 3 cut(s) 271, 405, 1333
Bse3DI GCAATG 1 cut(s) 1482
Bse8I GATNNNNATC 1 cut(s) 889
BseBI CCWGG 5 cut(s) 189, 205, 812, 1032, 1215
BseDI CCNNGG 5 cut(s) 188, 810, 811, 1452, 1461
BseGI GGATG 5 cut(s) 112, 426, 516, 1142, 1149
BseJI GATNNNNATC 1 cut(s) 889
BseLI CCNNNNNNNGG 2 cut(s) 1015, 1037
BseMI GCAATG 1 cut(s) 1482
BseMII CTCAG 5 cut(s) 27, 216, 699, 1122, 1279
BseNI ACTGG 3 cut(s) 271, 405, 1333
BseRI GAGGAG 1 cut(s) 226
BseSI GKGCMC 1 cut(s) 934
BseXI GCAGC 5 cut(s) 516, 577, 962, 1139, 1451
BsgI GTGCAG 1 cut(s) 291
BshFI GGCC 1 cut(s) 1466
BshNI GGYRCC 1 cut(s) 1289
BsiHKAI GWGCWC 3 cut(s) 826, 934, 1423
BsiHKCI CYCGRG 1 cut(s) 1460
BsiSI CCGG 2 cut(s) 503, 597
BslFI GGGAC 1 cut(s) 829
BslI CCNNNNNNNGG 2 cut(s) 1015, 1037
BsmAI GTCTC 2 cut(s) 303, 1231
BsmFI GGGAC 1 cut(s) 829
BsnI GGCC 1 cut(s) 1466
BsoBI CYCGRG 1 cut(s) 1460
Bsp1286I GDGCHC 3 cut(s) 826, 934, 1423
Bsp1407I TGTACA 1 cut(s) 26
Bsp143I GATC 4 cut(s) 606, 765, 1001, 1384
Bsp1720I GCTNAGC 1 cut(s) 708
BspACI CCGC 5 cut(s) 285, 386, 588, 740, 1311
BspANI GGCC 1 cut(s) 1466
BspCNI CTCAG 5 cut(s) 26, 217, 700, 1123, 1278
BspLI GGNNCC 5 cut(s) 289, 767, 1212, 1291, 1458
BspMAI CTGCAG 1 cut(s) 943
BspPI GGATC 4 cut(s) 760, 773, 1009, 1379
BspT107I GGYRCC 1 cut(s) 1289
BsrDI GCAATG 1 cut(s) 1482
BsrFI RCCGGY 1 cut(s) 502
BsrGI TGTACA 1 cut(s) 26
BsrI ACTGG 3 cut(s) 271, 405, 1333
BssAI RCCGGY 1 cut(s) 502
BssECI CCNNGG 5 cut(s) 188, 810, 811, 1452, 1461
BssMI GATC 4 cut(s) 606, 765, 1001, 1384
BssNI GRCGYC 2 cut(s) 144, 1195
BssT1I CCWWGG 1 cut(s) 1452
Bst2UI CCWGG 5 cut(s) 189, 205, 812, 1032, 1215
Bst4CI ACNGT 7 cut(s) 184, 295, 463, 513, 859, 1225, 1252
BstACI GRCGYC 2 cut(s) 144, 1195
BstAPI GCANNNNNTGC 4 cut(s) 278, 938, 1418, 1549
BstAUI TGTACA 1 cut(s) 26
BstDEI CTNAG 6 cut(s) 13, 225, 708, 975, 1131, 1265
BstENI CCTNNNNNAGG 1 cut(s) 1013
BstF5I GGATG 5 cut(s) 112, 426, 516, 1142, 1149
BstHHI GCGC 1 cut(s) 412
BstKTI GATC 4 cut(s) 609, 768, 1004, 1387
BstMAI GTCTC 2 cut(s) 303, 1231
BstMBI GATC 4 cut(s) 606, 765, 1001, 1384
BstMWI GCNNNNNNNGC 9 cut(s) 278, 383, 644, 938, 947, 956, 1418, 1448, 1549
BstNI CCWGG 5 cut(s) 189, 205, 812, 1032, 1215
BstNSI RCATGY 2 cut(s) 251, 834
BstSCI CCNGG 5 cut(s) 187, 203, 810, 1030, 1213
BstSFI CTRYAG 3 cut(s) 939, 1389, 1557
BstSLI GKGCMC 1 cut(s) 934
BstV1I GCAGC 5 cut(s) 516, 577, 962, 1139, 1451
BstX2I RGATCY 3 cut(s) 606, 765, 1001
BstYI RGATCY 3 cut(s) 606, 765, 1001
BsuI GTATCC 1 cut(s) 959
BsuRI GGCC 1 cut(s) 1466
BtgZI GCGATG 1 cut(s) 1284
BtsCI GGATG 5 cut(s) 112, 426, 516, 1142, 1149
BtsIMutI CAGTG 3 cut(s) 291, 412, 459
CaiI CAGNNNCTG 3 cut(s) 188, 707, 1313
CfoI GCGC 1 cut(s) 412
Cfr10I RCCGGY 1 cut(s) 502
Cfr13I GGNCC 1 cut(s) 1465
CseI GACGC 2 cut(s) 133, 840
CsiI ACCWGGT 1 cut(s) 1213
Csp6I GTAC 2 cut(s) 27, 1290
CviAII CATG 3 cut(s) 248, 831, 1424
CviQI GTAC 2 cut(s) 27, 1290
DdeI CTNAG 6 cut(s) 13, 225, 708, 975, 1131, 1265
DpnI GATC 4 cut(s) 608, 767, 1003, 1386
DpnII GATC 4 cut(s) 606, 765, 1001, 1384
Eco130I CCWWGG 1 cut(s) 1452
Eco32I GATATC 1 cut(s) 777
Eco88I CYCGRG 1 cut(s) 1460
EcoNI CCTNNNNNAGG 1 cut(s) 1013
EcoO109I RGGNCCY 1 cut(s) 1465
EcoRI GAATTC 1 cut(s) 199
EcoRII CCWGG 5 cut(s) 187, 203, 810, 1030, 1213
EcoRV GATATC 1 cut(s) 777
EcoT14I CCWWGG 1 cut(s) 1452
ErhI CCWWGG 1 cut(s) 1452
FaeI CATG 3 cut(s) 251, 834, 1427
FalI AAGNNNNNCTT 2 cut(s) 1347, 1379
FaqI GGGAC 1 cut(s) 829
FatI CATG 3 cut(s) 247, 830, 1423
FauI CCCGC 1 cut(s) 595
FblI GTMKAC 2 cut(s) 5, 244
Fnu4HI GCNGC 7 cut(s) 387, 530, 591, 951, 1128, 1311, 1440
FokI GGATG 5 cut(s) 99, 433, 503, 1129, 1136
Fsp4HI GCNGC 7 cut(s) 387, 530, 591, 951, 1128, 1311, 1440
FspBI CTAG 3 cut(s) 240, 1112, 1416
GlaI GCGC 1 cut(s) 411
GluI GCNGC 7 cut(s) 387, 530, 591, 951, 1128, 1311, 1440
GsuI CTGGAG 1 cut(s) 1053
HaeIII GGCC 1 cut(s) 1466
HapII CCGG 2 cut(s) 503, 597
HgaI GACGC 2 cut(s) 133, 840
HhaI GCGC 1 cut(s) 412
Hin1I GRCGYC 2 cut(s) 144, 1195
Hin1II CATG 3 cut(s) 251, 834, 1427
Hin6I GCGC 1 cut(s) 410
HinP1I GCGC 1 cut(s) 410
HincII GTYRAC 2 cut(s) 855, 1158
HindII GTYRAC 2 cut(s) 855, 1158
HindIII AAGCTT 2 cut(s) 481, 1546
HinfI GANTC 3 cut(s) 455, 989, 1056
HpaII CCGG 2 cut(s) 503, 597
HphI GGTGA 1 cut(s) 1052
Hpy166II GTNNAC 6 cut(s) 6, 29, 245, 855, 932, 1158
Hpy188I TCNGA 6 cut(s) 105, 226, 327, 895, 1050, 1497
Hpy188III TCNNGA 7 cut(s) 43, 452, 520, 604, 772, 882, 1117
Hpy8I GTNNAC 6 cut(s) 6, 29, 245, 855, 932, 1158
HpyAV CCTTC 7 cut(s) 19, 96, 558, 845, 898, 1096, 1280
HpyCH4III ACNGT 7 cut(s) 184, 295, 463, 513, 859, 1225, 1252
HpyCH4IV ACGT 2 cut(s) 1044, 1195
HpyF10VI GCNNNNNNNGC 9 cut(s) 278, 383, 644, 938, 947, 956, 1418, 1448, 1549
HpyF3I CTNAG 6 cut(s) 13, 225, 708, 975, 1131, 1265
HpySE526I ACGT 2 cut(s) 1044, 1195
Hsp92I GRCGYC 2 cut(s) 144, 1195
Hsp92II CATG 3 cut(s) 251, 834, 1427
HspAI GCGC 1 cut(s) 410
KpnI GGTACC 1 cut(s) 1293
KroI GCCGGC 1 cut(s) 502
KroNI GCCGGC 1 cut(s) 504
Kzo9I GATC 4 cut(s) 606, 765, 1001, 1384
LmnI GCTCC 3 cut(s) 239, 1034, 1340
Lsp1109I GCAGC 5 cut(s) 516, 577, 962, 1139, 1451
LweI GCATC 4 cut(s) 331, 609, 694, 1421
MabI ACCWGGT 1 cut(s) 1213
MaeI CTAG 3 cut(s) 240, 1112, 1416
MaeII ACGT 2 cut(s) 1044, 1195
MaeIII GTNAC 3 cut(s) 150, 1040, 1324
MalI GATC 4 cut(s) 608, 767, 1003, 1386
MboI GATC 4 cut(s) 606, 765, 1001, 1384
MboII GAAGA 2 cut(s) 690, 913
MflI RGATCY 3 cut(s) 606, 765, 1001
MhlI GDGCHC 3 cut(s) 826, 934, 1423
MlyI GAGTC 1 cut(s) 983
MmeI TCCRAC 6 cut(s) 604, 827, 1171, 1188, 1318, 1543
MroNI GCCGGC 1 cut(s) 502
MroXI GAANNNNTTC 1 cut(s) 908
MseI TTAA 1 cut(s) 396
MspA1I CMGCKG 3 cut(s) 590, 1130, 1313
MspI CCGG 2 cut(s) 503, 597
MspR9I CCNGG 5 cut(s) 189, 205, 812, 1032, 1215
MvaI CCWGG 5 cut(s) 189, 205, 812, 1032, 1215
MwoI GCNNNNNNNGC 9 cut(s) 278, 383, 644, 938, 947, 956, 1418, 1448, 1549
NaeI GCCGGC 1 cut(s) 504
NdeII GATC 4 cut(s) 606, 765, 1001, 1384
NgoMIV GCCGGC 1 cut(s) 502
NlaIII CATG 3 cut(s) 251, 834, 1427
NlaIV GGNNCC 5 cut(s) 289, 767, 1212, 1291, 1458
NmuCI GTSAC 1 cut(s) 1040
NspI RCATGY 2 cut(s) 251, 834
PasI CCCWGGG 1 cut(s) 811
PciI ACATGT 1 cut(s) 247
PdiI GCCGGC 1 cut(s) 504
PdmI GAANNNNTTC 1 cut(s) 908
PfeI GAWTC 2 cut(s) 455, 1056
PfoI TCCNGGA 1 cut(s) 1030
PkrI GCNGC 7 cut(s) 388, 531, 592, 952, 1129, 1312, 1441
PleI GAGTC 1 cut(s) 983
PpsI GAGTC 1 cut(s) 983
PscI ACATGT 1 cut(s) 247
Psp6I CCWGG 5 cut(s) 187, 203, 810, 1030, 1213
PspGI CCWGG 5 cut(s) 187, 203, 810, 1030, 1213
PspN4I GGNNCC 5 cut(s) 289, 767, 1212, 1291, 1458
PspPI GGNCC 1 cut(s) 1465
PstI CTGCAG 1 cut(s) 943
PstNI CAGNNNCTG 3 cut(s) 188, 707, 1313
PsuI RGATCY 3 cut(s) 606, 765, 1001
PvuII CAGCTG 1 cut(s) 1130
RsaI GTAC 2 cut(s) 28, 1291
RsaNI GTAC 2 cut(s) 27, 1290
SaqAI TTAA 1 cut(s) 396
SatI GCNGC 7 cut(s) 387, 530, 591, 951, 1128, 1311, 1440
Sau3AI GATC 4 cut(s) 606, 765, 1001, 1384
Sau96I GGNCC 1 cut(s) 1465
SchI GAGTC 1 cut(s) 983
ScrFI CCNGG 5 cut(s) 189, 205, 812, 1032, 1215
SduI GDGCHC 3 cut(s) 826, 934, 1423
SexAI ACCWGGT 1 cut(s) 1213
SfaNI GCATC 4 cut(s) 331, 609, 694, 1421
SfcI CTRYAG 3 cut(s) 939, 1389, 1557
SsiI CCGC 5 cut(s) 285, 386, 588, 740, 1311
SspMI CTAG 3 cut(s) 240, 1112, 1416
StyD4I CCNGG 5 cut(s) 187, 203, 810, 1030, 1213
StyI CCWWGG 1 cut(s) 1452
TaaI ACNGT 7 cut(s) 184, 295, 463, 513, 859, 1225, 1252
TaiI ACGT 2 cut(s) 1047, 1198
TaqI TCGA 3 cut(s) 357, 826, 1396
TatI WGTACW 1 cut(s) 26
TauI GCSGC 2 cut(s) 389, 1313
TfiI GAWTC 2 cut(s) 455, 1056
Tru1I TTAA 1 cut(s) 396
Tru9I TTAA 1 cut(s) 396
TscAI CASTG 3 cut(s) 298, 412, 466
TseFI GTSAC 1 cut(s) 1040
TseI GCWGC 5 cut(s) 529, 590, 950, 1127, 1439
Tsp45I GTSAC 1 cut(s) 1040
TspDTI ATGAA 4 cut(s) 48, 503, 505, 1011
TspGWI ACGGA 2 cut(s) 1135, 1370
TspRI CASTG 3 cut(s) 298, 412, 466
VneI GTGCAC 1 cut(s) 930
XagI CCTNNNNNAGG 1 cut(s) 1013
XapI RAATTY 2 cut(s) 121, 199
XceI RCATGY 2 cut(s) 251, 834
XmiI GTMKAC 2 cut(s) 5, 244
XmnI GAANNNNTTC 1 cut(s) 908
XspI CTAG 3 cut(s) 240, 1112, 1416
ZraI GACGTC 1 cut(s) 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.