Prupe.5G122100_v2.0.a1

Calcineurin B-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
12135993 .. 12138422
2430 bp
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UTR
Exon/CDS
Intron
Prupe.5G122100.1

Sequence Viewer

Length: 642 bp
ATGGGCTGTGTCTGGATGAAGCAGCGGCGTCAATGTGCCAATGCAGATGTTCTTGCTGCTCAAACATGTTTTAAGATAACTGATATTAAAACTCTGTATGAGTTGTTCAGGAAGCTAAGCAATTCTATAGTTGATGATGGGCTTATAAGCAAAGAAGAGTTTCAGCTAGGTTTATTCAGGAACAGCAAAAAAAAAAGTCTATTTGCAGATAGGATCTTCTATATGTTTGACTCGAAACATGACGGGGTAATAGAATTTGAAGAGTTTATTCGATGTCTAAATGTGTTCCACCCAGAAGCACCCCAAGCAGAAAAAGCTGCATTTGCATTTCAGTTATACGATATATGGCAGACGGGCTTCATCGAACGTGAAGAGGTGAAAGAGATGGTTTTGGCGCTTCTCAAGGAGTCAGACTTGATCCTCTGTGATGACATTGTGGAAGCCATTATTGATAAGACATTTGAGGAAGCAGATTTAAATGGAGATGGAAAGATTGATCTGGAAGAGTGGAGGGAACTCGTGGATCGAAATCCGTCCTTATTGAAGAACATGACAGTTCCATACCTGAAGGATATCACAAGTGCTTTTCCTAGTTTTGTGCTGAGACGAGACATTGAAGATGAAACTAGCAACTACCTCTAA

Protein Analysis

214

Amino Acids

24.82

Weight (kDa)

4.7

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017662)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g04810
malus_domestica MD14G1130200.v1.1
prunus_persica Prupe.5G122100_v2.0.a1 Prupe.5G122100_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0194321
rosa_multiflora Rmu_sc0000901.1_g000015
rosa_roxburghii Rroxscaffold_3G00261420
rosa_rugosa Rorug07G0015400
rosa_samantha Rh7AG142400 Rh7CG146500 Rh7DG144100
rosa_wichuraiana Rw7G012190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 146
AciI CCGC 1 cut(s) 25
AclWI GGATC 3 cut(s) 221, 412, 531
AcsI RAATTY 1 cut(s) 254
AcuI CTGAAG 1 cut(s) 587
AcyI GRCGYC 1 cut(s) 28
AflIII ACRYGT 1 cut(s) 65
AgsI TTSAA 3 cut(s) 260, 544, 617
AluBI AGCT 3 cut(s) 115, 166, 317
AluI AGCT 3 cut(s) 115, 166, 317
Alw26I GTCTC 2 cut(s) 598, 603
AlwI GGATC 3 cut(s) 221, 412, 531
ApeKI GCWGC 3 cut(s) 22, 56, 317
ApoI RAATTY 1 cut(s) 254
Asp700I GAANNNNTTC 1 cut(s) 159
AspLEI GCGC 1 cut(s) 397
AsuHPI GGTGA 1 cut(s) 388
BauI CACGAG 1 cut(s) 518
BbvI GCAGC 3 cut(s) 34, 43, 304
BccI CCATC 3 cut(s) 131, 379, 479
BcoDI GTCTC 2 cut(s) 598, 603
BfaI CTAG 3 cut(s) 167, 591, 627
BfmI CTRYAG 1 cut(s) 126
BfoI RGCGCY 1 cut(s) 398
BisI GCNGC 4 cut(s) 23, 26, 57, 318
BlpI GCTNAGC 1 cut(s) 116
BlsI GCNGC 4 cut(s) 24, 27, 58, 319
Bpu1102I GCTNAGC 1 cut(s) 116
BpuEI CTTGAG 1 cut(s) 386
BsaBI GATNNNNATC 1 cut(s) 528
BsaHI GRCGYC 1 cut(s) 28
Bse8I GATNNNNATC 1 cut(s) 528
BseGI GGATG 1 cut(s) 21
BseJI GATNNNNATC 1 cut(s) 528
BseMII CTCAG 1 cut(s) 593
BseXI GCAGC 3 cut(s) 34, 43, 304
BsmAI GTCTC 2 cut(s) 598, 603
BsmBI CGTCTC 1 cut(s) 598
Bsp143I GATC 4 cut(s) 213, 417, 496, 523
Bsp1720I GCTNAGC 1 cut(s) 116
BspACI CCGC 1 cut(s) 25
BspCNI CTCAG 1 cut(s) 594
BspPI GGATC 3 cut(s) 221, 412, 531
BssMI GATC 4 cut(s) 213, 417, 496, 523
BssNI GRCGYC 1 cut(s) 28
BssSI CACGAG 1 cut(s) 518
Bst2BI CACGAG 1 cut(s) 518
Bst4CI ACNGT 1 cut(s) 556
Bst6I CTCTTC 4 cut(s) 150, 255, 366, 498
BstACI GRCGYC 1 cut(s) 28
BstDEI CTNAG 2 cut(s) 116, 602
BstF5I GGATG 1 cut(s) 21
BstH2I RGCGCY 1 cut(s) 398
BstHHI GCGC 1 cut(s) 397
BstKTI GATC 4 cut(s) 216, 420, 499, 526
BstMAI GTCTC 2 cut(s) 598, 603
BstMBI GATC 4 cut(s) 213, 417, 496, 523
BstMWI GCNNNNNNNGC 3 cut(s) 305, 314, 323
BstNSI RCATGY 1 cut(s) 69
BstSFI CTRYAG 1 cut(s) 126
BstV1I GCAGC 3 cut(s) 34, 43, 304
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BtsCI GGATG 1 cut(s) 21
CfoI GCGC 1 cut(s) 397
CseI GACGC 1 cut(s) 17
CviAII CATG 3 cut(s) 66, 239, 550
CviJI RGCY 7 cut(s) 6, 115, 142, 166, 317, 357, 443
CviKI_1 RGCY 7 cut(s) 6, 115, 142, 166, 317, 357, 443
DdeI CTNAG 2 cut(s) 116, 602
DpnI GATC 4 cut(s) 215, 419, 498, 525
DpnII GATC 4 cut(s) 213, 417, 496, 523
DraI TTTAAA 1 cut(s) 477
Eam1104I CTCTTC 4 cut(s) 150, 255, 366, 498
EarI CTCTTC 4 cut(s) 150, 255, 366, 498
Eco32I GATATC 1 cut(s) 574
Eco57I CTGAAG 1 cut(s) 587
EcoRV GATATC 1 cut(s) 574
Esp3I CGTCTC 1 cut(s) 598
FaeI CATG 3 cut(s) 69, 242, 553
FatI CATG 3 cut(s) 65, 238, 549
Fnu4HI GCNGC 4 cut(s) 23, 26, 57, 318
FokI GGATG 1 cut(s) 28
Fsp4HI GCNGC 4 cut(s) 23, 26, 57, 318
FspBI CTAG 3 cut(s) 167, 591, 627
GlaI GCGC 1 cut(s) 396
GluI GCNGC 4 cut(s) 23, 26, 57, 318
HaeII RGCGCY 1 cut(s) 398
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 397
Hin1I GRCGYC 1 cut(s) 28
Hin1II CATG 3 cut(s) 69, 242, 553
Hin6I GCGC 1 cut(s) 395
HinP1I GCGC 1 cut(s) 395
HinfI GANTC 2 cut(s) 230, 407
HphI GGTGA 1 cut(s) 388
Hpy188I TCNGA 1 cut(s) 412
Hpy188III TCNNGA 4 cut(s) 13, 109, 178, 500
HpyAV CCTTC 1 cut(s) 562
HpyCH4III ACNGT 1 cut(s) 556
HpyCH4IV ACGT 1 cut(s) 367
HpyCH4V TGCA 4 cut(s) 44, 206, 320, 326
HpyF10VI GCNNNNNNNGC 3 cut(s) 305, 314, 323
HpyF3I CTNAG 2 cut(s) 116, 602
HpySE526I ACGT 1 cut(s) 367
Hsp92I GRCGYC 1 cut(s) 28
Hsp92II CATG 3 cut(s) 69, 242, 553
HspAI GCGC 1 cut(s) 395
Kzo9I GATC 4 cut(s) 213, 417, 496, 523
LpnPI CCDG 5 cut(s) 94, 163, 306, 485, 578
Lsp1109I GCAGC 3 cut(s) 34, 43, 304
MaeI CTAG 3 cut(s) 167, 591, 627
MaeII ACGT 1 cut(s) 367
MalI GATC 4 cut(s) 215, 419, 498, 525
MboI GATC 4 cut(s) 213, 417, 496, 523
MboII GAAGA 7 cut(s) 167, 208, 272, 383, 515, 556, 629
MflI RGATCY 1 cut(s) 213
MluCI AATT 2 cut(s) 121, 254
MlyI GAGTC 2 cut(s) 224, 416
MnlI CCTC 4 cut(s) 367, 431, 457, 504
MroXI GAANNNNTTC 1 cut(s) 159
MseI TTAA 3 cut(s) 72, 87, 476
MspA1I CMGCKG 1 cut(s) 25
MwoI GCNNNNNNNGC 3 cut(s) 305, 314, 323
NdeII GATC 4 cut(s) 213, 417, 496, 523
NlaIII CATG 3 cut(s) 69, 242, 553
NspI RCATGY 1 cut(s) 69
PciI ACATGT 1 cut(s) 65
PdmI GAANNNNTTC 1 cut(s) 159
PkrI GCNGC 4 cut(s) 24, 27, 58, 319
PleI GAGTC 2 cut(s) 224, 415
PpsI GAGTC 2 cut(s) 224, 415
PscI ACATGT 1 cut(s) 65
PsiI TTATAA 1 cut(s) 146
PsrI GAACNNNNNNTAC 2 cut(s) 89, 121
PsuI RGATCY 1 cut(s) 213
SaqAI TTAA 3 cut(s) 72, 87, 476
SatI GCNGC 4 cut(s) 23, 26, 57, 318
Sau3AI GATC 4 cut(s) 213, 417, 496, 523
SchI GAGTC 2 cut(s) 224, 416
SetI ASST 8 cut(s) 117, 168, 172, 319, 370, 378, 567, 639
SfcI CTRYAG 1 cut(s) 126
SmiI ATTTAAAT 1 cut(s) 477
SmlI CTYRAG 1 cut(s) 401
SmoI CTYRAG 1 cut(s) 401
Sse9I AATT 2 cut(s) 121, 254
SsiI CCGC 1 cut(s) 25
SspMI CTAG 3 cut(s) 167, 591, 627
SwaI ATTTAAAT 1 cut(s) 477
TaaI ACNGT 1 cut(s) 556
TaiI ACGT 1 cut(s) 370
TaqI TCGA 4 cut(s) 233, 271, 363, 526
TasI AATT 2 cut(s) 121, 254
TauI GCSGC 1 cut(s) 28
Tru1I TTAA 3 cut(s) 72, 87, 476
Tru9I TTAA 3 cut(s) 72, 87, 476
TseI GCWGC 3 cut(s) 22, 56, 317
TspDTI ATGAA 3 cut(s) 32, 349, 636
TspGWI ACGGA 1 cut(s) 522
XapI RAATTY 1 cut(s) 254
XceI RCATGY 1 cut(s) 69
XmnI GAANNNNTTC 1 cut(s) 159
XspI CTAG 3 cut(s) 167, 591, 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.