No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42070 |
| fragaria_vesca | FvH4_5g04930 |
| prunus_persica | Prupe.5G122800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0194141 |
| rosa_laevigata | RLG00000004214 |
| rosa_roxburghii | Rroxscaffold_3G00261520 |
| rosa_rugosa | Rorug07G0014100 |
| rosa_samantha | Rh7AG141200 Rh7BG141900 Rh7CG145300 Rh7DG142700 |
| rosa_wichuraiana | Rw7G012080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 335 |
| AciI | CCGC | 2 cut(s) | 390, 403 |
| AcoI | YGGCCR | 2 cut(s) | 344, 391 |
| AcuI | CTGAAG | 1 cut(s) | 129 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 245, 335, 371, 438 |
| AgsI | TTSAA | 2 cut(s) | 117, 308 |
| AjnI | CCWGG | 2 cut(s) | 328, 370 |
| AluBI | AGCT | 3 cut(s) | 143, 235, 417 |
| AluI | AGCT | 3 cut(s) | 143, 235, 417 |
| Alw26I | GTCTC | 1 cut(s) | 447 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 212, 366 |
| AoxI | GGCC | 5 cut(s) | 157, 163, 344, 362, 391 |
| ApeKI | GCWGC | 2 cut(s) | 140, 197 |
| AspS9I | GGNCC | 2 cut(s) | 164, 363 |
| BbvI | GCAGC | 2 cut(s) | 152, 184 |
| BccI | CCATC | 1 cut(s) | 47 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 14, 48 |
| BciT130I | CCWGG | 2 cut(s) | 330, 372 |
| BcoDI | GTCTC | 1 cut(s) | 447 |
| BfaI | CTAG | 1 cut(s) | 457 |
| BisI | GCNGC | 4 cut(s) | 141, 198, 391, 404 |
| BlpI | GCTNAGC | 1 cut(s) | 91 |
| BlsI | GCNGC | 4 cut(s) | 142, 199, 392, 405 |
| Bme1390I | CCNGG | 2 cut(s) | 330, 372 |
| BmgT120I | GGNCC | 2 cut(s) | 164, 363 |
| BmrFI | CCNGG | 2 cut(s) | 330, 372 |
| BmsI | GCATC | 2 cut(s) | 275, 392 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 91 |
| BsaJI | CCNNGG | 1 cut(s) | 160 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 245, 335, 371, 438 |
| Bse118I | RCCGGY | 1 cut(s) | 393 |
| Bse3DI | GCAATG | 1 cut(s) | 295 |
| BseBI | CCWGG | 2 cut(s) | 330, 372 |
| BseDI | CCNNGG | 1 cut(s) | 160 |
| BseGI | GGATG | 2 cut(s) | 290, 427 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 245, 335, 371, 438 |
| BseMI | GCAATG | 1 cut(s) | 295 |
| BseMII | CTCAG | 4 cut(s) | 33, 65, 105, 233 |
| BseRI | GAGGAG | 1 cut(s) | 165 |
| BseX3I | CGGCCG | 1 cut(s) | 391 |
| BseXI | GCAGC | 2 cut(s) | 152, 184 |
| BsgI | GTGCAG | 1 cut(s) | 159 |
| Bsh1285I | CGRYCG | 1 cut(s) | 394 |
| BshFI | GGCC | 5 cut(s) | 159, 165, 346, 364, 393 |
| BsiEI | CGRYCG | 1 cut(s) | 394 |
| BsiSI | CCGG | 1 cut(s) | 394 |
| BslFI | GGGAC | 1 cut(s) | 21 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 245, 335, 371, 438 |
| BsmAI | GTCTC | 1 cut(s) | 447 |
| BsmFI | GGGAC | 1 cut(s) | 21 |
| BsnI | GGCC | 5 cut(s) | 159, 165, 346, 364, 393 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 91 |
| BspACI | CCGC | 2 cut(s) | 390, 403 |
| BspANI | GGCC | 5 cut(s) | 159, 165, 346, 364, 393 |
| BspCNI | CTCAG | 4 cut(s) | 32, 64, 104, 234 |
| BsrDI | GCAATG | 1 cut(s) | 295 |
| BsrFI | RCCGGY | 1 cut(s) | 393 |
| BssAI | RCCGGY | 1 cut(s) | 393 |
| BssECI | CCNNGG | 1 cut(s) | 160 |
| BssT1I | CCWWGG | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 2 cut(s) | 330, 372 |
| Bst6I | CTCTTC | 1 cut(s) | 442 |
| BstC8I | GCNNGC | 1 cut(s) | 27 |
| BstDEI | CTNAG | 4 cut(s) | 19, 51, 91, 242 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 436 |
| BstF5I | GGATG | 2 cut(s) | 290, 427 |
| BstMAI | GTCTC | 1 cut(s) | 447 |
| BstMCI | CGRYCG | 1 cut(s) | 394 |
| BstNI | CCWGG | 2 cut(s) | 330, 372 |
| BstSCI | CCNGG | 2 cut(s) | 328, 370 |
| BstV1I | GCAGC | 2 cut(s) | 152, 184 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 78 |
| BstZI | CGGCCG | 1 cut(s) | 391 |
| BsuRI | GGCC | 5 cut(s) | 159, 165, 346, 364, 393 |
| BtsCI | GGATG | 2 cut(s) | 290, 427 |
| BtsIMutI | CAGTG | 2 cut(s) | 27, 216 |
| Cac8I | GCNNGC | 1 cut(s) | 27 |
| CaiI | CAGNNNCTG | 2 cut(s) | 212, 366 |
| Cfr10I | RCCGGY | 1 cut(s) | 393 |
| Cfr13I | GGNCC | 2 cut(s) | 164, 363 |
| CviAII | CATG | 1 cut(s) | 86 |
| DdeI | CTNAG | 4 cut(s) | 19, 51, 91, 242 |
| EaeI | YGGCCR | 2 cut(s) | 344, 391 |
| EagI | CGGCCG | 1 cut(s) | 391 |
| Eam1104I | CTCTTC | 1 cut(s) | 442 |
| EarI | CTCTTC | 1 cut(s) | 442 |
| EclXI | CGGCCG | 1 cut(s) | 391 |
| Eco130I | CCWWGG | 1 cut(s) | 160 |
| Eco52I | CGGCCG | 1 cut(s) | 391 |
| Eco57I | CTGAAG | 1 cut(s) | 129 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 436 |
| EcoO109I | RGGNCCY | 2 cut(s) | 164, 363 |
| EcoRII | CCWGG | 2 cut(s) | 328, 370 |
| EcoT14I | CCWWGG | 1 cut(s) | 160 |
| ErhI | CCWWGG | 1 cut(s) | 160 |
| FaeI | CATG | 1 cut(s) | 89 |
| FaiI | YATR | 3 cut(s) | 87, 358, 399 |
| FaqI | GGGAC | 1 cut(s) | 21 |
| FatI | CATG | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 4 cut(s) | 141, 198, 391, 404 |
| FokI | GGATG | 2 cut(s) | 297, 434 |
| Fsp4HI | GCNGC | 4 cut(s) | 141, 198, 391, 404 |
| FspBI | CTAG | 1 cut(s) | 457 |
| GluI | GCNGC | 4 cut(s) | 141, 198, 391, 404 |
| HaeIII | GGCC | 5 cut(s) | 159, 165, 346, 364, 393 |
| HapII | CCGG | 1 cut(s) | 394 |
| Hin1II | CATG | 1 cut(s) | 89 |
| HindIII | AAGCTT | 1 cut(s) | 415 |
| HinfI | GANTC | 3 cut(s) | 188, 209, 304 |
| HpaII | CCGG | 1 cut(s) | 394 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| HpyAV | CCTTC | 7 cut(s) | 23, 69, 123, 149, 274, 294, 432 |
| HpyCH4V | TGCA | 5 cut(s) | 25, 85, 140, 288, 320 |
| HpyF3I | CTNAG | 4 cut(s) | 19, 51, 91, 242 |
| Hsp92II | CATG | 1 cut(s) | 89 |
| Lsp1109I | GCAGC | 2 cut(s) | 152, 184 |
| LweI | GCATC | 2 cut(s) | 275, 392 |
| MaeI | CTAG | 1 cut(s) | 457 |
| MboII | GAAGA | 2 cut(s) | 122, 459 |
| MluCI | AATT | 1 cut(s) | 315 |
| MnlI | CCTC | 7 cut(s) | 42, 186, 262, 289, 418, 437, 443 |
| MspI | CCGG | 1 cut(s) | 394 |
| MspR9I | CCNGG | 2 cut(s) | 330, 372 |
| MvaI | CCWGG | 2 cut(s) | 330, 372 |
| NlaIII | CATG | 1 cut(s) | 89 |
| PfeI | GAWTC | 3 cut(s) | 188, 209, 304 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 335 |
| PfoI | TCCNGGA | 1 cut(s) | 370 |
| PkrI | GCNGC | 4 cut(s) | 142, 199, 392, 405 |
| Psp6I | CCWGG | 2 cut(s) | 328, 370 |
| PspGI | CCWGG | 2 cut(s) | 328, 370 |
| PspPI | GGNCC | 2 cut(s) | 164, 363 |
| PstNI | CAGNNNCTG | 2 cut(s) | 212, 366 |
| SatI | GCNGC | 4 cut(s) | 141, 198, 391, 404 |
| Sau96I | GGNCC | 2 cut(s) | 164, 363 |
| ScrFI | CCNGG | 2 cut(s) | 330, 372 |
| SetI | ASST | 7 cut(s) | 34, 145, 184, 237, 313, 419, 429 |
| SfaNI | GCATC | 2 cut(s) | 275, 392 |
| Sse9I | AATT | 1 cut(s) | 315 |
| SsiI | CCGC | 2 cut(s) | 390, 403 |
| SspMI | CTAG | 1 cut(s) | 457 |
| StyD4I | CCNGG | 2 cut(s) | 328, 370 |
| StyI | CCWWGG | 1 cut(s) | 160 |
| TasI | AATT | 1 cut(s) | 315 |
| TauI | GCSGC | 2 cut(s) | 393, 406 |
| TfiI | GAWTC | 3 cut(s) | 188, 209, 304 |
| TscAI | CASTG | 2 cut(s) | 27, 223 |
| TseI | GCWGC | 2 cut(s) | 140, 197 |
| TspRI | CASTG | 2 cut(s) | 27, 223 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 335 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 436 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 336 |
| XspI | CTAG | 1 cut(s) | 457 |