Prupe.5G195500_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15855055 .. 15856656
1602 bp
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UTR
Exon/CDS
Intron
Prupe.5G195500.1

Sequence Viewer

Length: 573 bp
ATGGCAGAAGCTATCATGGGCTTCACCATTATCAGTCCACATATTCACAGCTCCTCTCTCCAAACAGCTAAATTGGACATGACTCACACGAGCTCATGTACCAGATTGCTTAGGCAGTCTTCAAGCTCTGAACTTTTCAGTGGGGCCAAGCAGCTTGTAGTTGGGAAGAATAGCAAAAGAGCCTCTTTATGCAAAACAAATGCCTTCCCAGATTGGCCTTTGATGGCAGTTCTAGTTGAACACATAGAAGGCCAAAGAGACCTTATAACCCACAAATCTATTGTGCATCTCAGTGATGAATCCATAAAGAACGTCTATACTTTTTACATCATGTTCACTTGTTGGGGATGCTTATTCTTTGGTTCCATGAAGGATCCATACTATGATTCAGAAACGTACAGAAAAGATGGAGGTGATGGTACTGGACATTGGATTTATGAGAAGCAAGCAGACATTGAAGAATCTGCAAGAGCAGAGTTGTGGAGGGAGGAGCTGATTGAGGAGATAGAGCAGAAGGTTGGAAGCTTGAGAGAGTTGGAAGAGGCTGGTAAGGAGGAGGAGCTTGTCAAGTGA

Protein Analysis

191

Amino Acids

21.6

Weight (kDa)

5.28

Isoelectric Point (pI)

66.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 266
AclWI GGATC 2 cut(s) 368, 381
AfaI GTAC 3 cut(s) 100, 398, 421
AgsI TTSAA 3 cut(s) 123, 239, 458
AluBI AGCT 9 cut(s) 11, 51, 68, 93, 126, 154, 493, 525, 562
AluI AGCT 9 cut(s) 11, 51, 68, 93, 126, 154, 493, 525, 562
Alw21I GWGCWC 1 cut(s) 95
Alw26I GTCTC 1 cut(s) 252
AlwI GGATC 2 cut(s) 368, 381
AoxI GGCC 3 cut(s) 144, 215, 250
ApeKI GCWGC 1 cut(s) 151
AspS9I GGNCC 1 cut(s) 144
AsuHPI GGTGA 2 cut(s) 16, 425
BamHI GGATCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 95
BarI GAAGNNNNNNTAC 2 cut(s) 362, 394
BauI CACGAG 1 cut(s) 88
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 163
BccI CCATC 3 cut(s) 217, 401, 410
BcoDI GTCTC 1 cut(s) 252
BfaI CTAG 1 cut(s) 233
BisI GCNGC 1 cut(s) 152
BlsI GCNGC 1 cut(s) 153
BmgT120I GGNCC 1 cut(s) 144
BmiI GGNNCC 3 cut(s) 145, 364, 375
BmsI GCATC 2 cut(s) 295, 338
BpiI GAAGAC 1 cut(s) 111
Bpu10I CCTNAGC 1 cut(s) 110
BpuEI CTTGAG 1 cut(s) 547
BsaI GGTCTC 1 cut(s) 252
Bse1I ACTGG 1 cut(s) 427
BseGI GGATG 1 cut(s) 353
BseMII CTCAG 1 cut(s) 304
BseNI ACTGG 1 cut(s) 427
BseRI GAGGAG 5 cut(s) 43, 503, 515, 569, 572
BseXI GCAGC 1 cut(s) 163
BshFI GGCC 3 cut(s) 146, 217, 252
BsiHKAI GWGCWC 1 cut(s) 95
BsmAI GTCTC 1 cut(s) 252
BsnI GGCC 3 cut(s) 146, 217, 252
Bso31I GGTCTC 1 cut(s) 252
Bsp1286I GDGCHC 1 cut(s) 95
Bsp143I GATC 1 cut(s) 373
BspANI GGCC 3 cut(s) 146, 217, 252
BspCNI CTCAG 1 cut(s) 303
BspLI GGNNCC 3 cut(s) 145, 364, 375
BspPI GGATC 2 cut(s) 368, 381
BspTNI GGTCTC 1 cut(s) 252
BsrI ACTGG 1 cut(s) 427
BssMI GATC 1 cut(s) 373
BssSI CACGAG 1 cut(s) 88
Bst2BI CACGAG 1 cut(s) 88
Bst6I CTCTTC 1 cut(s) 534
BstC8I GCNNGC 1 cut(s) 447
BstDEI CTNAG 2 cut(s) 110, 290
BstF5I GGATG 1 cut(s) 353
BstKTI GATC 1 cut(s) 376
BstMAI GTCTC 1 cut(s) 252
BstMBI GATC 1 cut(s) 373
BstV1I GCAGC 1 cut(s) 163
BstV2I GAAGAC 1 cut(s) 111
BstX2I RGATCY 1 cut(s) 373
BstYI RGATCY 1 cut(s) 373
BsuRI GGCC 3 cut(s) 146, 217, 252
BtsCI GGATG 1 cut(s) 353
BtsIMutI CAGTG 2 cut(s) 145, 298
Cac8I GCNNGC 1 cut(s) 447
Cfr13I GGNCC 1 cut(s) 144
Csp6I GTAC 3 cut(s) 99, 397, 420
CviAII CATG 5 cut(s) 16, 79, 96, 331, 367
CviQI GTAC 3 cut(s) 99, 397, 420
DdeI CTNAG 2 cut(s) 110, 290
DpnI GATC 1 cut(s) 375
DpnII GATC 1 cut(s) 373
Eam1104I CTCTTC 1 cut(s) 534
EarI CTCTTC 1 cut(s) 534
Ecl136II GAGCTC 1 cut(s) 93
Eco24I GRGCYC 1 cut(s) 95
Eco31I GGTCTC 1 cut(s) 252
Eco53kI GAGCTC 1 cut(s) 93
EcoICRI GAGCTC 1 cut(s) 93
EcoT38I GRGCYC 1 cut(s) 95
FaeI CATG 5 cut(s) 19, 82, 99, 334, 370
FalI AAGNNNNNCTT 2 cut(s) 169, 201
FatI CATG 5 cut(s) 15, 78, 95, 330, 366
Fnu4HI GCNGC 1 cut(s) 152
FokI GGATG 1 cut(s) 360
FriOI GRGCYC 1 cut(s) 95
Fsp4HI GCNGC 1 cut(s) 152
FspBI CTAG 1 cut(s) 233
GluI GCNGC 1 cut(s) 152
HaeIII GGCC 3 cut(s) 146, 217, 252
Hin1II CATG 5 cut(s) 19, 82, 99, 334, 370
HindIII AAGCTT 1 cut(s) 523
HinfI GANTC 4 cut(s) 82, 299, 386, 461
HphI GGTGA 2 cut(s) 16, 425
Hpy166II GTNNAC 2 cut(s) 38, 336
Hpy188I TCNGA 2 cut(s) 130, 391
Hpy8I GTNNAC 2 cut(s) 38, 336
HpyAV CCTTC 4 cut(s) 214, 242, 364, 508
HpyCH4IV ACGT 2 cut(s) 312, 395
HpyCH4V TGCA 3 cut(s) 192, 286, 467
HpyF3I CTNAG 2 cut(s) 110, 290
HpySE526I ACGT 2 cut(s) 312, 395
Hsp92II CATG 5 cut(s) 19, 82, 99, 334, 370
Kzo9I GATC 1 cut(s) 373
LmnI GCTCC 3 cut(s) 56, 490, 559
LpnPI CCDG 4 cut(s) 115, 222, 408, 531
Lsp1109I GCAGC 1 cut(s) 163
LweI GCATC 2 cut(s) 295, 338
MaeI CTAG 1 cut(s) 233
MaeII ACGT 2 cut(s) 312, 395
MalI GATC 1 cut(s) 375
MboI GATC 1 cut(s) 373
MboII GAAGA 4 cut(s) 111, 178, 470, 551
MflI RGATCY 1 cut(s) 373
MhlI GDGCHC 1 cut(s) 95
MluCI AATT 1 cut(s) 71
MlyI GAGTC 1 cut(s) 76
MmeI TCCRAC 2 cut(s) 499, 516
MnlI CCTC 9 cut(s) 64, 193, 404, 477, 481, 493, 535, 547, 550
MslI CAYNNNNRTG 1 cut(s) 291
NdeII GATC 1 cut(s) 373
NlaIII CATG 5 cut(s) 19, 82, 99, 334, 370
NlaIV GGNNCC 3 cut(s) 145, 364, 375
PfeI GAWTC 3 cut(s) 299, 386, 461
PkrI GCNGC 1 cut(s) 153
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
PsiI TTATAA 1 cut(s) 266
Psp124BI GAGCTC 1 cut(s) 95
PspN4I GGNNCC 3 cut(s) 145, 364, 375
PspPI GGNCC 1 cut(s) 144
PsuI RGATCY 1 cut(s) 373
RsaI GTAC 3 cut(s) 100, 398, 421
RsaNI GTAC 3 cut(s) 99, 397, 420
RseI CAYNNNNRTG 1 cut(s) 291
SacI GAGCTC 1 cut(s) 95
SatI GCNGC 1 cut(s) 152
Sau3AI GATC 1 cut(s) 373
Sau96I GGNCC 1 cut(s) 144
SchI GAGTC 1 cut(s) 76
SduI GDGCHC 1 cut(s) 95
SfaNI GCATC 2 cut(s) 295, 338
SmiMI CAYNNNNRTG 1 cut(s) 291
SmlI CTYRAG 1 cut(s) 526
SmoI CTYRAG 1 cut(s) 526
Sse9I AATT 1 cut(s) 71
SspMI CTAG 1 cut(s) 233
SstI GAGCTC 1 cut(s) 95
TaiI ACGT 2 cut(s) 315, 398
TasI AATT 1 cut(s) 71
TfiI GAWTC 3 cut(s) 299, 386, 461
TscAI CASTG 2 cut(s) 145, 298
TseI GCWGC 1 cut(s) 151
TspDTI ATGAA 2 cut(s) 312, 383
TspRI CASTG 2 cut(s) 145, 298
XspI CTAG 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.