Rorug06G0442900

Endoplasmic reticulum membrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002194
Physical Location & Seq
Forward (+)
57471167 .. 57475668
4502 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0442900.1

Sequence Viewer

Length: 2289 bp
ATGGTGTTTAATCGAATTGCCAATTTCTTTGCTTCTCTATCGAGTCGTTGGTCTAGCCCTCAGGCTGTATCGCCTCCCAAATCTGCTGCTTTTGCCTTTGCAAACACCGCACGCAACAAGAACCTTCTCAGACTCTCGTCGTCTCTCCAGGATTTCTCATCTTATAGCCAGCTTGATATCGAAGATCCCAATATCGCAACTGTGACACATTCGAAACCCCCTCCTCATTCATTGCAGAGAGAGACTGCTGCTGCCTCCAGCTTTTCCAAGGAGAAATCACTGCCAGGAGGAGGAGGAGGAGGAGCCCCATTTTCGCGCAACAAGTGGGTACGAGCCTTCATGTTTCTTTGCTGTGTTTTGTTGGTTGGTTTTCTAGTTTATTTGCTTTCCATGTTGGTTTATTCCTACTGGTTTAAAGGAGAGCCCAAATTCTATATTGTGCTGGATTGTGGAAGTACTGGGACTAGAGTTTATGTATATCAGGCAACCTTGGACAACGAGAAAGATAACAGTTTTCCGATTGTCTTGAAGTCATTAACAGAAGGTCTTCAAATAAAACCTAAGGCTCACACAGGGCGAGCTTATGATCGGATGGAAACTGAGCCTGGGCTCGACAAGTTGGTGCACAATGTCTCAGGATTGAAGGTTGCAATAAAACCACTTGTTCAATGGGCAGAGAAGCAAATCCCAAAGAATGCACACAAGACAACCTCACTCTTCCTCTATGCAACTGCAGGGGTTCGTAGGCTGCCGAGTAATGATTCAAAATGGCTTCTAGATAATGCATGGTCTATCCTCAAGACTTCACCTTTCTTGTGCCAAAGAGACTGGGTTAGGACTATCAGTGGCCTGGAAGAAGCTTACTTTGGCTGGATAGCCCTTAACCATCATAGGGCTATGTTTGGGGCTGGACCTAGAAAGCCAACATTTGGTTCGCTTGACTTGGGTGGTTCATCACTGCAGGTTACATTTGAGAGTAATGAACATGTGCAAAAAGACACCAGTTTAAACATTAGAATTGGGGCTGTGAGCCATCATCTCACTGCATATTCTCTCCCTGGTTATGGTTTAAATGATGCGTTTGACAAGTCTGTGGGTCGTCTCTTCGAGAGGCTTCCAGAAGTCAATAAGACAGAACTAGTGAATGGGAAGGGAGAACTTAAGCATCCGTGCCTGCAGTCTGGGTATAAGGAGCAATACATTTGCTCTCAATGTGTTTCGAAATTCCAAGAAGGCGGAAGCCCTGTGATTGCAAAAAAGAGTTTGGGCAAAGGAGGAAGATCAGGGGTTTCTCTGAAGCTCATCGGTGCTCCAAATTGGGAGGAGTGTGGTAAACTAGCAAGAGTTGCTGTTAATTTATCGGAATGGTCCAATATAACGCCTGCACTCGATTGTGACGTGCAACCTTGTGCTCTTCCAGATGGTTTACCCCGACCTTATGGAAATTTTTATGCAATTTCAGGATTTTTTGTGGTTTATCGGTTTTTCAATTTGACTTCTGAGTCGTCACTTGATGATGTTTTGGAAAAGGGTCGGCAGTTTTGTGAAAGAACTTGGGAAGCTGCAAAGAAGAGTGTTGCTCCTCAGCCTTTCATTGAACAGTACTGTTTTAGGGCACCATATATTGCATTCTTGTTGAGGGAGGGCTTGCACATTATAGACAATCAAATCACCATTGGTTCTGGAAGTATCACGTGGACACAGGGGGTTGCTCTGCTGGAAGCTGGAAAGACACTTTCAACCGGACTGGGGTTTCGCAGTTACGAAGTACTCCGGATGAAAATAAACCCATTATTTCTTCTTTCAGTTTTGTTTATATCATTGATTTTACTCCTTTGTGCATTATCATGTATTGGCAATTGGATGCCAAAAATTTTCTGGAGGCCATATCTCCCGCTGTTTTGGACCAATAATGCGTCTTCTGCATCTGGTATTCCATCTCCTTTCCGGTTCCAGCGCTGGAGTCCTATTATTCCCGGGGATGGAAGAGTAAAGACGCCTCTTAGTCCAACAATTGCAGGTGGTGTCCAACAAAGACCATTCGGATTGGGACATGGTCTCAACAACGGTGGTGGAATCCAACTAATGGAGTCTTCCTTGTGCCCATCAAGTAGCAGCATCTCCCATAGTTATTCGTCAAATAGCCTGGGCCAGATGCAATTCGACAGTAGTAGCATGGGCCCCTTCTGGTCTCCTCACAGATCTCAGATGCGTCTTCAAAGCAGGCGATCACAATCTCGAGAAGACCTCAATTCTTCTCTGACTGAGGCACACATGACAAAAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF962

Protein Analysis

762

Amino Acids

84.28

Weight (kDa)

9.35

Isoelectric Point (pI)

46.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 141 - 572 6.2e-51 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2009
AasI GACNNNNNNGTC 1 cut(s) 1501
Acc36I ACCTGC 2 cut(s) 952, 2009
AccB1I GGYRCC 1 cut(s) 1615
AccB7I CCANNNNNTGG 2 cut(s) 929, 2086
AccII CGCG 1 cut(s) 316
AccIII TCCGGA 1 cut(s) 1773
AciI CCGC 3 cut(s) 108, 1236, 1895
AclWI GGATC 1 cut(s) 179
AcsI RAATTY 4 cut(s) 428, 1223, 1444, 1872
AcuI CTGAAG 1 cut(s) 1316
AcvI CACGTG 1 cut(s) 1695
AcyI GRCGYC 1 cut(s) 1997
AfaI GTAC 4 cut(s) 330, 457, 1604, 1770
AfeI AGCGCT 1 cut(s) 1958
AfiI CCNNNNNNNGG 7 cut(s) 290, 892, 929, 1064, 1749, 1982, 2086
AflII CTTAAG 1 cut(s) 1160
AflIII ACRYGT 1 cut(s) 985
AgsI TTSAA 9 cut(s) 529, 551, 643, 668, 765, 1489, 1598, 1740, 2219
AhlI ACTAGT 1 cut(s) 1138
AjiI CACGTC 1 cut(s) 1399
AjnI CCWGG 6 cut(s) 147, 283, 604, 849, 1057, 2145
AjuI GAANNNNNNNTTGG 4 cut(s) 849, 881, 916, 948
AluBI AGCT 7 cut(s) 172, 261, 581, 860, 1300, 1562, 1724
AluI AGCT 7 cut(s) 172, 261, 581, 860, 1300, 1562, 1724
Alw21I GWGCWC 3 cut(s) 627, 1312, 1414
Alw26I GTCTC 7 cut(s) 147, 236, 637, 819, 1106, 2063, 2196
Alw44I GTGCAC 1 cut(s) 623
AlwI GGATC 1 cut(s) 179
Ama87I CYCGRG 2 cut(s) 1976, 2238
Aor13HI TCCGGA 1 cut(s) 1773
Aor51HI AGCGCT 1 cut(s) 1958
AoxI GGCC 4 cut(s) 847, 1883, 2149, 2179
ApaI GGGCCC 1 cut(s) 2183
ApaLI GTGCAC 1 cut(s) 623
ApeKI GCWGC 6 cut(s) 86, 248, 251, 748, 1562, 2115
ApoI RAATTY 4 cut(s) 428, 1223, 1444, 1872
ArsI GACNNNNNNTTYG 2 cut(s) 1737, 1769
Asp700I GAANNNNTTC 1 cut(s) 546
AspLEI GCGC 2 cut(s) 318, 1959
AspS9I GGNCC 6 cut(s) 911, 1368, 1905, 2149, 2179, 2180
AsuC2I CCSGG 2 cut(s) 1977, 1978
AsuHPI GGTGA 2 cut(s) 798, 1663
AsuII TTCGAA 2 cut(s) 212, 1220
AvaI CYCGRG 2 cut(s) 1976, 2238
AvaII GGWCC 3 cut(s) 911, 1368, 1905
AxyI CCTNAGG 2 cut(s) 60, 561
BaeGI GKGCMC 4 cut(s) 627, 1618, 2105, 2183
BanI GGYRCC 1 cut(s) 1615
BanII GRGCYC 4 cut(s) 307, 426, 612, 2183
BbrPI CACGTG 1 cut(s) 1695
BbsI GAAGAC 5 cut(s) 539, 1911, 2085, 2207, 2250
Bbv12I GWGCWC 3 cut(s) 627, 1312, 1414
BbvCI CCTCAGC 1 cut(s) 1584
BbvI GCAGC 6 cut(s) 73, 235, 238, 735, 1549, 2127
BccI CCATC 7 cut(s) 586, 894, 1041, 1415, 1945, 1976, 2113
BciT130I CCWGG 6 cut(s) 149, 285, 606, 851, 1059, 2147
BcnI CCSGG 2 cut(s) 1977, 1978
BcoDI GTCTC 7 cut(s) 147, 236, 637, 819, 1106, 2063, 2196
BcuI ACTAGT 1 cut(s) 1138
BfaI CTAG 7 cut(s) 54, 374, 465, 776, 915, 1139, 1337
BfmI CTRYAG 3 cut(s) 732, 959, 1175
BfoI RGCGCY 1 cut(s) 1960
BfrI CTTAAG 1 cut(s) 1160
BfuAI ACCTGC 2 cut(s) 952, 2009
BglII AGATCT 1 cut(s) 2201
BisI GCNGC 6 cut(s) 87, 249, 252, 749, 1563, 2116
BlsI GCNGC 6 cut(s) 88, 250, 253, 750, 1564, 2117
BmcAI AGTACT 3 cut(s) 457, 1604, 1770
Bme1390I CCNGG 8 cut(s) 149, 285, 606, 851, 1059, 1977, 1978, 2147
Bme18I GGWCC 3 cut(s) 911, 1368, 1905
BmeT110I CYCGRG 2 cut(s) 1976, 2238
BmgBI CACGTC 1 cut(s) 1399
BmgT120I GGNCC 6 cut(s) 911, 1368, 1905, 2149, 2179, 2180
BmiI GGNNCC 5 cut(s) 304, 1617, 1952, 2181, 2182
BmrFI CCNGG 8 cut(s) 149, 285, 606, 851, 1059, 1977, 1978, 2147
BmrI ACTGGG 3 cut(s) 468, 838, 1757
BmsI GCATC 7 cut(s) 1066, 1174, 1854, 1934, 2127, 2145, 2199
BmuI ACTGGG 3 cut(s) 468, 838, 1757
BoxI GACNNNNGTC 1 cut(s) 136
BpiI GAAGAC 5 cut(s) 539, 1911, 2085, 2207, 2250
BplI GAGNNNNNCTC 4 cut(s) 1564, 1596, 2232, 2264
BpmI CTGGAG 4 cut(s) 131, 241, 1900, 1981
Bpu10I CCTNAGC 1 cut(s) 1584
Bpu14I TTCGAA 2 cut(s) 212, 1220
BpuEI CTTGAG 1 cut(s) 782
BpuMI CCSGG 2 cut(s) 1977, 1978
BsaAI YACGTR 1 cut(s) 1695
BsaBI GATNNNNATC 1 cut(s) 2233
BsaHI GRCGYC 1 cut(s) 1997
BsaI GGTCTC 2 cut(s) 2063, 2196
BsaJI CCNNGG 7 cut(s) 267, 489, 605, 1057, 1976, 1977, 2146
BsaWI WCCGGW 3 cut(s) 1742, 1773, 1947
Bsc4I CCNNNNNNNGG 7 cut(s) 290, 892, 929, 1064, 1749, 1982, 2086
Bse1I ACTGG 5 cut(s) 413, 463, 833, 1002, 1752
Bse21I CCTNAGG 2 cut(s) 60, 561
Bse3DI GCAATG 1 cut(s) 230
Bse8I GATNNNNATC 1 cut(s) 2233
BseAI TCCGGA 1 cut(s) 1773
BseBI CCWGG 6 cut(s) 149, 285, 606, 851, 1059, 2147
BseDI CCNNGG 7 cut(s) 267, 489, 605, 1057, 1976, 1977, 2146
BseGI GGATG 5 cut(s) 597, 1165, 1782, 1869, 1987
BseJI GATNNNNATC 1 cut(s) 2233
BseLI CCNNNNNNNGG 7 cut(s) 290, 892, 929, 1064, 1749, 1982, 2086
BseMI GCAATG 1 cut(s) 230
BseMII CTCAG 8 cut(s) 74, 142, 591, 648, 1491, 1598, 2219, 2256
BseNI ACTGG 5 cut(s) 413, 463, 833, 1002, 1752
BseRI GAGGAG 9 cut(s) 213, 303, 306, 309, 312, 315, 1337, 1572, 2184
BseSI GKGCMC 4 cut(s) 627, 1618, 2105, 2183
BseXI GCAGC 6 cut(s) 73, 235, 238, 735, 1549, 2127
BsgI GTGCAG 1 cut(s) 1368
Bsh1236I CGCG 1 cut(s) 316
BshFI GGCC 4 cut(s) 849, 1885, 2151, 2181
BshNI GGYRCC 1 cut(s) 1615
BsiHKAI GWGCWC 3 cut(s) 627, 1312, 1414
BsiHKCI CYCGRG 2 cut(s) 1976, 2238
BsiSI CCGG 4 cut(s) 1743, 1774, 1948, 1977
BslFI GGGAC 2 cut(s) 475, 2064
BslI CCNNNNNNNGG 7 cut(s) 290, 892, 929, 1064, 1749, 1982, 2086
BsmAI GTCTC 7 cut(s) 147, 236, 637, 819, 1106, 2063, 2196
BsmBI CGTCTC 2 cut(s) 147, 1106
BsmFI GGGAC 2 cut(s) 475, 2064
BsmI GAATGC 2 cut(s) 700, 1628
BsnI GGCC 4 cut(s) 849, 1885, 2151, 2181
Bso31I GGTCTC 2 cut(s) 2063, 2196
BsoBI CYCGRG 2 cut(s) 1976, 2238
Bsp119I TTCGAA 2 cut(s) 212, 1220
Bsp120I GGGCCC 1 cut(s) 2179
Bsp1286I GDGCHC 9 cut(s) 307, 426, 612, 627, 1312, 1414, 1618, 2105, 2183
Bsp13I TCCGGA 1 cut(s) 1773
Bsp143I GATC 5 cut(s) 184, 586, 1280, 2201, 2228
BspACI CCGC 3 cut(s) 108, 1236, 1895
BspANI GGCC 4 cut(s) 849, 1885, 2151, 2181
BspCNI CTCAG 8 cut(s) 73, 141, 592, 647, 1492, 1597, 2218, 2257
BspEI TCCGGA 1 cut(s) 1773
BspFNI CGCG 1 cut(s) 316
BspLI GGNNCC 5 cut(s) 304, 1617, 1952, 2181, 2182
BspMAI CTGCAG 3 cut(s) 736, 963, 1179
BspMI ACCTGC 2 cut(s) 952, 2009
BspPI GGATC 1 cut(s) 179
BspQI GCTCTTC 1 cut(s) 1419
BspT104I TTCGAA 2 cut(s) 212, 1220
BspT107I GGYRCC 1 cut(s) 1615
BspTI CTTAAG 1 cut(s) 1160
BspTNI GGTCTC 2 cut(s) 2063, 2196
BsrDI GCAATG 1 cut(s) 230
BsrI ACTGG 5 cut(s) 413, 463, 833, 1002, 1752
BssECI CCNNGG 7 cut(s) 267, 489, 605, 1057, 1976, 1977, 2146
BssMI GATC 5 cut(s) 184, 586, 1280, 2201, 2228
BssNI GRCGYC 1 cut(s) 1997
BssT1I CCWWGG 2 cut(s) 267, 489
Bst2UI CCWGG 6 cut(s) 149, 285, 606, 851, 1059, 2147
Bst4CI ACNGT 6 cut(s) 202, 512, 1602, 1607, 2069, 2168
Bst6I CTCTTC 5 cut(s) 722, 1109, 1419, 1565, 1981
BstACI GRCGYC 1 cut(s) 1997
BstAFI CTTAAG 1 cut(s) 1160
BstAPI GCANNNNNTGC 1 cut(s) 1346
BstBAI YACGTR 1 cut(s) 1695
BstBI TTCGAA 2 cut(s) 212, 1220
BstC8I GCNNGC 7 cut(s) 112, 170, 579, 1175, 1383, 1649, 2225
BstF5I GGATG 5 cut(s) 597, 1165, 1782, 1869, 1987
BstFNI CGCG 1 cut(s) 316
BstH2I RGCGCY 1 cut(s) 1960
BstHHI GCGC 2 cut(s) 318, 1959
BstKTI GATC 5 cut(s) 187, 589, 1283, 2204, 2231
BstMAI GTCTC 7 cut(s) 147, 236, 637, 819, 1106, 2063, 2196
BstMBI GATC 5 cut(s) 184, 586, 1280, 2201, 2228
BstMWI GCNNNNNNNGC 4 cut(s) 92, 107, 1346, 1922
BstNI CCWGG 6 cut(s) 149, 285, 606, 851, 1059, 2147
BstNSI RCATGY 1 cut(s) 989
BstPAI GACNNNNGTC 1 cut(s) 136
BstSCI CCNGG 8 cut(s) 147, 283, 604, 849, 1057, 1975, 1976, 2145
BstSFI CTRYAG 3 cut(s) 732, 959, 1175
BstSLI GKGCMC 4 cut(s) 627, 1618, 2105, 2183
BstUI CGCG 1 cut(s) 316
BstV1I GCAGC 6 cut(s) 73, 235, 238, 735, 1549, 2127
BstV2I GAAGAC 5 cut(s) 539, 1911, 2085, 2207, 2250
BstX2I RGATCY 2 cut(s) 184, 2201
BstYI RGATCY 2 cut(s) 184, 2201
Bsu36I CCTNAGG 2 cut(s) 60, 561
BsuRI GGCC 4 cut(s) 849, 1885, 2151, 2181
BtrI CACGTC 1 cut(s) 1399
BtsCI GGATG 5 cut(s) 597, 1165, 1782, 1869, 1987
BtsI GCAGTG 3 cut(s) 278, 956, 1041
BtsIMutI CAGTG 4 cut(s) 278, 850, 956, 1041
BveI ACCTGC 2 cut(s) 952, 2009
Cac8I GCNNGC 7 cut(s) 112, 170, 579, 1175, 1383, 1649, 2225
CfoI GCGC 2 cut(s) 318, 1959
Cfr13I GGNCC 6 cut(s) 911, 1368, 1905, 2149, 2179, 2180
Cfr9I CCCGGG 1 cut(s) 1976
CseI GACGC 3 cut(s) 1905, 2005, 2201
Csp6I GTAC 4 cut(s) 329, 456, 1603, 1769
CspCI CAANNNNNGTGG 4 cut(s) 2050, 2053, 2085, 2088
CviAII CATG 8 cut(s) 340, 391, 786, 986, 1848, 2054, 2176, 2275
CviQI GTAC 4 cut(s) 329, 456, 1603, 1769
DpnI GATC 5 cut(s) 186, 588, 1282, 2203, 2230
DpnII GATC 5 cut(s) 184, 586, 1280, 2201, 2228
DraI TTTAAA 3 cut(s) 415, 1008, 1071
DrdI GACNNNNNNGTC 1 cut(s) 1501
DseDI GACNNNNNNGTC 1 cut(s) 1501
Eam1104I CTCTTC 5 cut(s) 722, 1109, 1419, 1565, 1981
EarI CTCTTC 5 cut(s) 722, 1109, 1419, 1565, 1981
EciI GGCGGA 1 cut(s) 1251
Eco130I CCWWGG 2 cut(s) 267, 489
Eco24I GRGCYC 4 cut(s) 307, 426, 612, 2183
Eco31I GGTCTC 2 cut(s) 2063, 2196
Eco32I GATATC 1 cut(s) 178
Eco47I GGWCC 3 cut(s) 911, 1368, 1905
Eco47III AGCGCT 1 cut(s) 1958
Eco57I CTGAAG 1 cut(s) 1316
Eco72I CACGTG 1 cut(s) 1695
Eco81I CCTNAGG 2 cut(s) 60, 561
Eco88I CYCGRG 2 cut(s) 1976, 2238
EcoO109I RGGNCCY 1 cut(s) 2180
EcoRII CCWGG 6 cut(s) 147, 283, 604, 849, 1057, 2145
EcoRV GATATC 1 cut(s) 178
EcoT14I CCWWGG 2 cut(s) 267, 489
EcoT22I ATGCAT 1 cut(s) 787
EcoT38I GRGCYC 4 cut(s) 307, 426, 612, 2183
ErhI CCWWGG 2 cut(s) 267, 489
Esp3I CGTCTC 2 cut(s) 147, 1106
FaeI CATG 8 cut(s) 343, 394, 789, 989, 1851, 2057, 2179, 2278
FaqI GGGAC 2 cut(s) 475, 2064
FatI CATG 8 cut(s) 339, 390, 785, 985, 1847, 2053, 2175, 2274
FauI CCCGC 1 cut(s) 1902
Fnu4HI GCNGC 6 cut(s) 87, 249, 252, 749, 1563, 2116
FokI GGATG 5 cut(s) 604, 1152, 1789, 1876, 1994
FriOI GRGCYC 4 cut(s) 307, 426, 612, 2183
Fsp4HI GCNGC 6 cut(s) 87, 249, 252, 749, 1563, 2116
FspBI CTAG 7 cut(s) 54, 374, 465, 776, 915, 1139, 1337
GlaI GCGC 2 cut(s) 317, 1958
GluI GCNGC 6 cut(s) 87, 249, 252, 749, 1563, 2116
GsuI CTGGAG 4 cut(s) 131, 241, 1900, 1981
HaeII RGCGCY 1 cut(s) 1960
HaeIII GGCC 4 cut(s) 849, 1885, 2151, 2181
HapII CCGG 4 cut(s) 1743, 1774, 1948, 1977
HgaI GACGC 3 cut(s) 1905, 2005, 2201
HhaI GCGC 2 cut(s) 318, 1959
Hin1I GRCGYC 1 cut(s) 1997
Hin1II CATG 8 cut(s) 343, 394, 789, 989, 1851, 2057, 2179, 2278
Hin6I GCGC 2 cut(s) 316, 1957
HinP1I GCGC 2 cut(s) 316, 1957
HindIII AAGCTT 1 cut(s) 858
HinfI GANTC 7 cut(s) 43, 132, 761, 1502, 1963, 2076, 2090
HpaII CCGG 4 cut(s) 1743, 1774, 1948, 1977
HphI GGTGA 2 cut(s) 798, 1663
Hpy166II GTNNAC 4 cut(s) 625, 1334, 1427, 1698
Hpy188I TCNGA 9 cut(s) 131, 519, 591, 1296, 1363, 1501, 2045, 2208, 2262
Hpy8I GTNNAC 4 cut(s) 625, 1334, 1427, 1698
Hpy99I CGWCG 1 cut(s) 142
HpyAV CCTTC 7 cut(s) 134, 346, 536, 637, 1144, 1226, 2194
HpyCH4III ACNGT 6 cut(s) 202, 512, 1602, 1607, 2069, 2168
HpyCH4IV ACGT 2 cut(s) 1398, 1694
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 107, 1346, 1922
HpySE526I ACGT 2 cut(s) 1398, 1694
Hsp92I GRCGYC 1 cut(s) 1997
Hsp92II CATG 8 cut(s) 343, 394, 789, 989, 1851, 2057, 2179, 2278
HspAI GCGC 2 cut(s) 316, 1957
Kpn2I TCCGGA 1 cut(s) 1773
Kzo9I GATC 5 cut(s) 184, 586, 1280, 2201, 2228
LguI GCTCTTC 1 cut(s) 1419
LmnI GCTCC 4 cut(s) 302, 1192, 1315, 1585
Lsp1109I GCAGC 6 cut(s) 73, 235, 238, 735, 1549, 2127
LweI GCATC 7 cut(s) 1066, 1174, 1854, 1934, 2127, 2145, 2199
MaeI CTAG 7 cut(s) 54, 374, 465, 776, 915, 1139, 1337
MaeII ACGT 2 cut(s) 1398, 1694
MaeIII GTNAC 5 cut(s) 202, 964, 1394, 1506, 1760
MalI GATC 5 cut(s) 186, 588, 1282, 2203, 2230
MboI GATC 5 cut(s) 184, 586, 1280, 2201, 2228
MfeI CAATTG 2 cut(s) 1858, 2013
MflI RGATCY 2 cut(s) 184, 2201
MhlI GDGCHC 9 cut(s) 307, 426, 612, 627, 1312, 1414, 1618, 2105, 2183
MlyI GAGTC 5 cut(s) 52, 126, 1511, 1972, 2099
MmeI TCCRAC 3 cut(s) 2033, 2053, 2104
Mph1103I ATGCAT 1 cut(s) 787
MroI TCCGGA 1 cut(s) 1773
MroXI GAANNNNTTC 1 cut(s) 546
MseI TTAA 8 cut(s) 9, 414, 536, 882, 1007, 1070, 1161, 1353
MslI CAYNNNNRTG 1 cut(s) 1846
MspA1I CMGCKG 1 cut(s) 1897
MspCI CTTAAG 1 cut(s) 1160
MspI CCGG 4 cut(s) 1743, 1774, 1948, 1977
MspR9I CCNGG 8 cut(s) 149, 285, 606, 851, 1059, 1977, 1978, 2147
MssI GTTTAAAC 1 cut(s) 1008
MunI CAATTG 2 cut(s) 1858, 2013
Mva1269I GAATGC 2 cut(s) 700, 1628
MvaI CCWGG 6 cut(s) 149, 285, 606, 851, 1059, 2147
MvnI CGCG 1 cut(s) 316
MwoI GCNNNNNNNGC 4 cut(s) 92, 107, 1346, 1922
NciI CCSGG 2 cut(s) 1977, 1978
NdeII GATC 5 cut(s) 184, 586, 1280, 2201, 2228
NlaIII CATG 8 cut(s) 343, 394, 789, 989, 1851, 2057, 2179, 2278
NlaIV GGNNCC 5 cut(s) 304, 1617, 1952, 2181, 2182
NmeAIII GCCGAG 1 cut(s) 777
NmuCI GTSAC 3 cut(s) 202, 1394, 1506
NsiI ATGCAT 1 cut(s) 787
NspI RCATGY 1 cut(s) 989
NspV TTCGAA 2 cut(s) 212, 1220
PaeR7I CTCGAG 1 cut(s) 2238
PaqCI CACCTGC 1 cut(s) 2009
PciI ACATGT 1 cut(s) 985
PciSI GCTCTTC 1 cut(s) 1419
PcsI WCGNNNNNNNCGW 1 cut(s) 1395
PctI GAATGC 2 cut(s) 700, 1628
PdmI GAANNNNTTC 1 cut(s) 546
PfeI GAWTC 2 cut(s) 761, 2076
PflFI GACNNNGTC 1 cut(s) 2055
PflMI CCANNNNNTGG 2 cut(s) 929, 2086
PfoI TCCNGGA 1 cut(s) 147
PkrI GCNGC 6 cut(s) 88, 250, 253, 750, 1564, 2117
PleI GAGTC 5 cut(s) 51, 126, 1510, 1971, 2098
PmaCI CACGTG 1 cut(s) 1695
PmeI GTTTAAAC 1 cut(s) 1008
PmlI CACGTG 1 cut(s) 1695
PpsI GAGTC 5 cut(s) 51, 126, 1510, 1971, 2098
Ppu21I YACGTR 1 cut(s) 1695
PscI ACATGT 1 cut(s) 985
PshAI GACNNNNGTC 1 cut(s) 136
Psp6I CCWGG 6 cut(s) 147, 283, 604, 849, 1057, 2145
PspCI CACGTG 1 cut(s) 1695
PspGI CCWGG 6 cut(s) 147, 283, 604, 849, 1057, 2145
PspN4I GGNNCC 5 cut(s) 304, 1617, 1952, 2181, 2182
PspOMI GGGCCC 1 cut(s) 2179
PspPI GGNCC 6 cut(s) 911, 1368, 1905, 2149, 2179, 2180
PstI CTGCAG 3 cut(s) 736, 963, 1179
PsuI RGATCY 2 cut(s) 184, 2201
PsyI GACNNNGTC 1 cut(s) 2055
RsaI GTAC 4 cut(s) 330, 457, 1604, 1770
RsaNI GTAC 4 cut(s) 329, 456, 1603, 1769
RseI CAYNNNNRTG 1 cut(s) 1846
SapI GCTCTTC 1 cut(s) 1419
SaqAI TTAA 8 cut(s) 9, 414, 536, 882, 1007, 1070, 1161, 1353
SatI GCNGC 6 cut(s) 87, 249, 252, 749, 1563, 2116
Sau3AI GATC 5 cut(s) 184, 586, 1280, 2201, 2228
Sau96I GGNCC 6 cut(s) 911, 1368, 1905, 2149, 2179, 2180
ScaI AGTACT 3 cut(s) 457, 1604, 1770
SchI GAGTC 5 cut(s) 52, 126, 1511, 1972, 2099
ScrFI CCNGG 8 cut(s) 149, 285, 606, 851, 1059, 1977, 1978, 2147
SduI GDGCHC 9 cut(s) 307, 426, 612, 627, 1312, 1414, 1618, 2105, 2183
SfaNI GCATC 7 cut(s) 1066, 1174, 1854, 1934, 2127, 2145, 2199
SfcI CTRYAG 3 cut(s) 732, 959, 1175
Sfr274I CTCGAG 1 cut(s) 2238
SfuI TTCGAA 2 cut(s) 212, 1220
SinI GGWCC 3 cut(s) 911, 1368, 1905
SlaI CTCGAG 1 cut(s) 2238
SmaI CCCGGG 1 cut(s) 1978
SmiMI CAYNNNNRTG 1 cut(s) 1846
SmlI CTYRAG 3 cut(s) 797, 1160, 2238
SmoI CTYRAG 3 cut(s) 797, 1160, 2238
SpeI ACTAGT 1 cut(s) 1138
SsiI CCGC 3 cut(s) 108, 1236, 1895
SspMI CTAG 7 cut(s) 54, 374, 465, 776, 915, 1139, 1337
StyD4I CCNGG 8 cut(s) 147, 283, 604, 849, 1057, 1975, 1976, 2145
StyI CCWWGG 2 cut(s) 267, 489
TaaI ACNGT 6 cut(s) 202, 512, 1602, 1607, 2069, 2168
TaiI ACGT 2 cut(s) 1401, 1697
TatI WGTACW 3 cut(s) 455, 1602, 1768
TfiI GAWTC 2 cut(s) 761, 2076
Tru1I TTAA 8 cut(s) 9, 414, 536, 882, 1007, 1070, 1161, 1353
Tru9I TTAA 8 cut(s) 9, 414, 536, 882, 1007, 1070, 1161, 1353
TscAI CASTG 4 cut(s) 285, 850, 963, 1048
TseFI GTSAC 3 cut(s) 202, 1394, 1506
TseI GCWGC 6 cut(s) 86, 248, 251, 748, 1562, 2115
Tsp45I GTSAC 3 cut(s) 202, 1394, 1506
TspDTI ATGAA 6 cut(s) 219, 328, 942, 996, 1582, 1793
TspGWI ACGGA 1 cut(s) 1158
TspMI CCCGGG 1 cut(s) 1976
TspRI CASTG 4 cut(s) 285, 850, 963, 1048
Tth111I GACNNNGTC 1 cut(s) 2055
Van91I CCANNNNNTGG 2 cut(s) 929, 2086
Vha464I CTTAAG 1 cut(s) 1160
VneI GTGCAC 1 cut(s) 623
VpaK11BI GGWCC 3 cut(s) 911, 1368, 1905
XapI RAATTY 4 cut(s) 428, 1223, 1444, 1872
XbaI TCTAGA 1 cut(s) 775
XceI RCATGY 1 cut(s) 989
XcmI CCANNNNNNNNNTGG 2 cut(s) 666, 1875
XhoI CTCGAG 1 cut(s) 2238
XmaI CCCGGG 1 cut(s) 1976
XmnI GAANNNNTTC 1 cut(s) 546
XspI CTAG 7 cut(s) 54, 374, 465, 776, 915, 1139, 1337
ZrmI AGTACT 3 cut(s) 457, 1604, 1770
Zsp2I ATGCAT 1 cut(s) 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.