Prupe.6G037000_v2.0.a1

Belongs to the GRAS family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
2793373 .. 2794605
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G037000.1

Sequence Viewer

Length: 1233 bp
ATGCCAAGGGGCTTGATGACCACCTCACCAACCCACATGCGCCAATTGCTCATTACCTGCGCCGAGCTCATTTCCCAGCTTGACTTCTCCTCCGCTCGCCGCCTCATTTCCCTCTTGTCTTCCAAATCCTCCCCGTTCGGGGACTCCACCGAGAGATTGACCCACCAGTTTGTCAAAGCCCTCTCCCTCCGCCTCAATAATCCTAACCCTAGCTCTAGTGCGGCACTCACAACTGCCGCCACTGCGGCCGCATCCTCCTCCTCCAACTACTTATTGTTGGAAGAGGAGGACGACAACAACAACGAGGAGGCACTTCACTCGTGCTACCTAACCCTAAACCAGATAACTCCATTCATAAGATTCAGCCACTTGACAGCCAACCAAGCCATCCTCGAAGCCATAGACTCATCCCATCATTCCATCCACATCCTCGACTTTGACATCATGCACGGCGTCCAGTGGCCCCCACTGATGCAAGCCCTCACCGACCGCTCCTACAACAGCGACAGAACCGTCCAACATCCGCCTCCCATGCTTCGAATCACCGCCACGGGCCACAGCCTGGCCCTCCTCCTCAAAACCGGTGACCGCCTCTTAAAATTCGCCAACTCCCTCGGCCTCGCCTTCCATTTCCACCCACTCGTCCTAAATGACGCCGTCCAACCGTCAGACATAATCAGCCCTTCAACCCTCGGCCTCCTCCCGAACGAAGCCCTCGCCGTCAACTGCGTGCTCTACCTCCACACCCTCGTCACGGACGACTCACGTGAGCTCTCTCTCTTCCTCCGGAAGATCAAGTCATTAAACCCAAAGGTGTTGACGATCGCCAACAAAGAGGCCAACCACAACCACCCTCTCTTCTTCAACCGGTTCGTGGAAGCTCTGGAGCACTACGGCGCCGTTTTCGACTCGTTGGAAGCGACGCTGCCTCCGAACAGCAGGGAGAGGCAGGCGGTGGAGGATGTGTGGATGGGGAGGGAGATTAGGGACGTGGTGGGGGCGGAGGAGGGGAGGAGAAGGCAAAGGCACGAAAAGTACGAGACGTATTGGGAGGTGATGTTGAGGAGGGCAGGTTTTGAGAACGTGGCTTTGAGCCCTTTTGCTCTCTCGCAAGCGAAGCTGCTTCTGAGGCTTCATTATCCTTCCGAGGGTTACCAGCTGAGGATAATCAATGACTCTTTTTTCTTAGGTTGGCAGAATCGTCCCCTTTTCTCTGTTTCTTCTTGGCACTAA

Protein Analysis

411

Amino Acids

46.25

Weight (kDa)

6.44

Isoelectric Point (pI)

50.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015917)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G55580
fragaria_vesca FvH4_3g41310
malus_domestica MD03G1045700.v1.1 MD11G1047900.v1.1
prunus_persica Prupe.6G037000_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0074111
rosa_laevigata RLG00000036456
rosa_multiflora Rmu_sc0000573.1_g000063
rosa_roxburghii Rroxscaffold_1G00007280
rosa_rugosa Rorug05G0429200
rosa_samantha Rh5AG487000 Rh5BG507300 Rh5CG530900 Rh5DG519700
rosa_wichuraiana Rw5G045210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 512
Acc36I ACCTGC 2 cut(s) 65, 1061
AccB1I GGYRCC 1 cut(s) 896
AccB7I CCANNNNNTGG 1 cut(s) 562
AccBSI CCGCTC 2 cut(s) 95, 492
AccIII TCCGGA 1 cut(s) 786
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 1 cut(s) 599
AcvI CACGTG 1 cut(s) 767
AcyI GRCGYC 3 cut(s) 453, 654, 897
AfaI GTAC 1 cut(s) 1037
AfiI CCNNNNNNNGG 6 cut(s) 138, 139, 562, 754, 874, 1148
AgeI ACCGGT 2 cut(s) 581, 867
AgsI TTSAA 2 cut(s) 687, 865
AjiI CACGTC 1 cut(s) 991
AjnI CCWGG 1 cut(s) 561
AluBI AGCT 7 cut(s) 67, 79, 213, 772, 881, 1120, 1159
AluI AGCT 7 cut(s) 67, 79, 213, 772, 881, 1120, 1159
Alw21I GWGCWC 4 cut(s) 69, 735, 774, 891
Alw26I GTCTC 1 cut(s) 1034
Aor13HI TCCGGA 1 cut(s) 786
AoxI GGCC 7 cut(s) 246, 461, 553, 564, 616, 694, 837
ApeKI GCWGC 2 cut(s) 925, 1120
ApoI RAATTY 1 cut(s) 599
AsiGI ACCGGT 2 cut(s) 581, 867
AspLEI GCGC 3 cut(s) 42, 62, 899
AspS9I GGNCC 3 cut(s) 462, 553, 565
AsuHPI GGTGA 5 cut(s) 18, 475, 535, 596, 1066
AsuII TTCGAA 1 cut(s) 538
BanI GGYRCC 1 cut(s) 896
BanII GRGCYC 3 cut(s) 69, 774, 1097
BauI CACGAG 1 cut(s) 319
BbrPI CACGTG 1 cut(s) 767
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 4 cut(s) 69, 735, 774, 891
BbvCI CCTCAGC 1 cut(s) 1160
BbvI GCAGC 2 cut(s) 912, 1107
BccI CCATC 4 cut(s) 395, 420, 428, 964
BceAI ACGGC 5 cut(s) 466, 641, 704, 884, 910
BcgI CGANNNNNNTGC 2 cut(s) 300, 334
BciT130I CCWGG 1 cut(s) 563
BcoDI GTCTC 1 cut(s) 1034
BfaI CTAG 2 cut(s) 210, 216
BfoI RGCGCY 1 cut(s) 900
BfuAI ACCTGC 2 cut(s) 65, 1061
BglI GCCNNNNNGGC 1 cut(s) 245
BisI GCNGC 7 cut(s) 100, 222, 237, 246, 249, 926, 1121
BlsI GCNGC 7 cut(s) 101, 223, 238, 247, 250, 927, 1122
Bme1390I CCNGG 1 cut(s) 563
BmgBI CACGTC 1 cut(s) 991
BmgT120I GGNCC 3 cut(s) 462, 553, 565
BmiI GGNNCC 2 cut(s) 464, 898
BmrFI CCNGG 1 cut(s) 563
BmsI GCATC 2 cut(s) 260, 462
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 905
Bpu10I CCTNAGC 1 cut(s) 1160
Bpu14I TTCGAA 1 cut(s) 538
BsaAI YACGTR 1 cut(s) 767
BsaHI GRCGYC 3 cut(s) 453, 654, 897
BsaJI CCNNGG 5 cut(s) 5, 549, 613, 691, 1146
BsaWI WCCGGW 3 cut(s) 581, 786, 867
Bsc4I CCNNNNNNNGG 6 cut(s) 138, 139, 562, 754, 874, 1148
Bse118I RCCGGY 2 cut(s) 581, 867
Bse1I ACTGG 2 cut(s) 166, 457
BseAI TCCGGA 1 cut(s) 786
BseBI CCWGG 1 cut(s) 563
BseDI CCNNGG 5 cut(s) 5, 549, 613, 691, 1146
BseGI GGATG 8 cut(s) 251, 387, 407, 420, 426, 520, 967, 975
BseLI CCNNNNNNNGG 6 cut(s) 138, 139, 562, 754, 874, 1148
BseMII CTCAG 2 cut(s) 1118, 1151
BseNI ACTGG 2 cut(s) 166, 457
BseX3I CGGCCG 1 cut(s) 246
BseXI GCAGC 2 cut(s) 912, 1107
BseYI CCCAGC 1 cut(s) 75
Bsh1285I CGRYCG 3 cut(s) 249, 490, 825
BshFI GGCC 7 cut(s) 248, 463, 555, 566, 618, 696, 839
BshNI GGYRCC 1 cut(s) 896
BshTI ACCGGT 2 cut(s) 581, 867
BsiEI CGRYCG 3 cut(s) 249, 490, 825
BsiHKAI GWGCWC 4 cut(s) 69, 735, 774, 891
BsiSI CCGG 3 cut(s) 582, 787, 868
BslFI GGGAC 3 cut(s) 155, 1001, 1188
BslI CCNNNNNNNGG 6 cut(s) 138, 139, 562, 754, 874, 1148
BsmAI GTCTC 1 cut(s) 1034
BsmBI CGTCTC 1 cut(s) 1034
BsmFI GGGAC 3 cut(s) 155, 1001, 1188
BsnI GGCC 7 cut(s) 248, 463, 555, 566, 618, 696, 839
Bsp119I TTCGAA 1 cut(s) 538
Bsp1286I GDGCHC 5 cut(s) 69, 735, 774, 891, 1097
Bsp13I TCCGGA 1 cut(s) 786
Bsp143I GATC 2 cut(s) 792, 822
BspANI GGCC 7 cut(s) 248, 463, 555, 566, 618, 696, 839
BspCNI CTCAG 2 cut(s) 1119, 1152
BspEI TCCGGA 1 cut(s) 786
BspLI GGNNCC 2 cut(s) 464, 898
BspMI ACCTGC 2 cut(s) 65, 1061
BspT104I TTCGAA 1 cut(s) 538
BspT107I GGYRCC 1 cut(s) 896
BsrBI CCGCTC 2 cut(s) 95, 492
BsrFI RCCGGY 2 cut(s) 581, 867
BsrI ACTGG 2 cut(s) 166, 457
BssAI RCCGGY 2 cut(s) 581, 867
BssECI CCNNGG 5 cut(s) 5, 549, 613, 691, 1146
BssMI GATC 2 cut(s) 792, 822
BssNI GRCGYC 3 cut(s) 453, 654, 897
BssSI CACGAG 1 cut(s) 319
BssT1I CCWWGG 1 cut(s) 5
Bst2BI CACGAG 1 cut(s) 319
Bst2UI CCWGG 1 cut(s) 563
Bst4CI ACNGT 2 cut(s) 514, 666
Bst6I CTCTTC 3 cut(s) 276, 785, 863
BstACI GRCGYC 3 cut(s) 453, 654, 897
BstBAI YACGTR 1 cut(s) 767
BstBI TTCGAA 1 cut(s) 538
BstC8I GCNNGC 5 cut(s) 97, 477, 731, 951, 1113
BstDEI CTNAG 3 cut(s) 1127, 1160, 1186
BstDSI CCRYGG 1 cut(s) 549
BstEII GGTNACC 2 cut(s) 584, 1151
BstF5I GGATG 8 cut(s) 251, 387, 407, 420, 426, 520, 967, 975
BstH2I RGCGCY 1 cut(s) 900
BstHHI GCGC 3 cut(s) 42, 62, 899
BstKTI GATC 2 cut(s) 795, 825
BstMAI GTCTC 1 cut(s) 1034
BstMBI GATC 2 cut(s) 792, 822
BstMCI CGRYCG 3 cut(s) 249, 490, 825
BstMWI GCNNNNNNNGC 7 cut(s) 46, 242, 245, 383, 532, 1117, 1129
BstNI CCWGG 1 cut(s) 563
BstNSI RCATGY 1 cut(s) 40
BstPI GGTNACC 2 cut(s) 584, 1151
BstSCI CCNGG 1 cut(s) 561
BstV1I GCAGC 2 cut(s) 912, 1107
BstV2I GAAGAC 1 cut(s) 111
BstZI CGGCCG 1 cut(s) 246
BsuRI GGCC 7 cut(s) 248, 463, 555, 566, 618, 696, 839
BtgI CCRYGG 1 cut(s) 549
BtrI CACGTC 1 cut(s) 991
BtsCI GGATG 8 cut(s) 251, 387, 407, 420, 426, 520, 967, 975
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 3 cut(s) 240, 464, 467
BveI ACCTGC 2 cut(s) 65, 1061
Cac8I GCNNGC 5 cut(s) 97, 477, 731, 951, 1113
CciNI GCGGCCGC 1 cut(s) 246
CfoI GCGC 3 cut(s) 42, 62, 899
Cfr10I RCCGGY 2 cut(s) 581, 867
Cfr13I GGNCC 3 cut(s) 462, 553, 565
CseI GACGC 3 cut(s) 442, 662, 931
Csp6I GTAC 1 cut(s) 1036
CspAI ACCGGT 2 cut(s) 581, 867
CviAII CATG 3 cut(s) 37, 445, 532
CviQI GTAC 1 cut(s) 1036
DdeI CTNAG 3 cut(s) 1127, 1160, 1186
DinI GGCGCC 1 cut(s) 898
DpnI GATC 2 cut(s) 794, 824
DpnII GATC 2 cut(s) 792, 822
DrdI GACNNNNNNGTC 1 cut(s) 512
DseDI GACNNNNNNGTC 1 cut(s) 512
EaeI YGGCCR 1 cut(s) 246
EagI CGGCCG 1 cut(s) 246
Eam1104I CTCTTC 3 cut(s) 276, 785, 863
EarI CTCTTC 3 cut(s) 276, 785, 863
EciI GGCGGA 3 cut(s) 179, 513, 1016
Ecl136II GAGCTC 2 cut(s) 67, 772
EclXI CGGCCG 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 5
Eco24I GRGCYC 3 cut(s) 69, 774, 1097
Eco52I CGGCCG 1 cut(s) 246
Eco53kI GAGCTC 2 cut(s) 67, 772
Eco72I CACGTG 1 cut(s) 767
Eco91I GGTNACC 2 cut(s) 584, 1151
EcoICRI GAGCTC 2 cut(s) 67, 772
EcoO65I GGTNACC 2 cut(s) 584, 1151
EcoRII CCWGG 1 cut(s) 561
EcoT14I CCWWGG 1 cut(s) 5
EcoT38I GRGCYC 3 cut(s) 69, 774, 1097
EgeI GGCGCC 1 cut(s) 898
EheI GGCGCC 1 cut(s) 898
ErhI CCWWGG 1 cut(s) 5
Esp3I CGTCTC 1 cut(s) 1034
FaeI CATG 3 cut(s) 40, 448, 535
FaiI YATR 6 cut(s) 38, 356, 401, 446, 533, 674
FaqI GGGAC 3 cut(s) 155, 1001, 1188
FatI CATG 3 cut(s) 36, 444, 531
Fnu4HI GCNGC 7 cut(s) 100, 222, 237, 246, 249, 926, 1121
FokI GGATG 8 cut(s) 238, 374, 394, 407, 413, 507, 974, 982
FriOI GRGCYC 3 cut(s) 69, 774, 1097
Fsp4HI GCNGC 7 cut(s) 100, 222, 237, 246, 249, 926, 1121
FspBI CTAG 2 cut(s) 210, 216
GlaI GCGC 3 cut(s) 41, 61, 898
GluI GCNGC 7 cut(s) 100, 222, 237, 246, 249, 926, 1121
GsaI CCCAGC 1 cut(s) 79
GsuI CTGGAG 1 cut(s) 905
HaeII RGCGCY 1 cut(s) 900
HaeIII GGCC 7 cut(s) 248, 463, 555, 566, 618, 696, 839
HapII CCGG 3 cut(s) 582, 787, 868
HgaI GACGC 3 cut(s) 442, 662, 931
HhaI GCGC 3 cut(s) 42, 62, 899
Hin1I GRCGYC 3 cut(s) 453, 654, 897
Hin1II CATG 3 cut(s) 40, 448, 535
Hin6I GCGC 3 cut(s) 40, 60, 897
HinP1I GCGC 3 cut(s) 40, 60, 897
HincII GTYRAC 2 cut(s) 724, 819
HindII GTYRAC 2 cut(s) 724, 819
HinfI GANTC 8 cut(s) 143, 360, 404, 540, 761, 908, 1175, 1198
HpaII CCGG 3 cut(s) 582, 787, 868
HphI GGTGA 5 cut(s) 18, 475, 535, 596, 1066
Hpy166II GTNNAC 2 cut(s) 724, 819
Hpy188I TCNGA 4 cut(s) 670, 933, 1128, 1147
Hpy188III TCNNGA 3 cut(s) 703, 787, 884
Hpy8I GTNNAC 2 cut(s) 724, 819
Hpy99I CGWCG 1 cut(s) 925
HpyAV CCTTC 4 cut(s) 634, 693, 1011, 1152
HpyCH4III ACNGT 2 cut(s) 514, 666
HpyCH4IV ACGT 4 cut(s) 766, 990, 1043, 1083
HpyCH4V TGCA 2 cut(s) 448, 475
HpyF10VI GCNNNNNNNGC 7 cut(s) 46, 242, 245, 383, 532, 1117, 1129
HpyF3I CTNAG 3 cut(s) 1127, 1160, 1186
HpySE526I ACGT 4 cut(s) 766, 990, 1043, 1083
Hsp92I GRCGYC 3 cut(s) 453, 654, 897
Hsp92II CATG 3 cut(s) 40, 448, 535
HspAI GCGC 3 cut(s) 40, 60, 897
KasI GGCGCC 1 cut(s) 896
Kpn2I TCCGGA 1 cut(s) 786
Kzo9I GATC 2 cut(s) 792, 822
LmnI GCTCC 2 cut(s) 497, 886
Lsp1109I GCAGC 2 cut(s) 912, 1107
LweI GCATC 2 cut(s) 260, 462
MaeI CTAG 2 cut(s) 210, 216
MaeII ACGT 4 cut(s) 766, 990, 1043, 1083
MaeIII GTNAC 3 cut(s) 584, 751, 1151
MalI GATC 2 cut(s) 794, 824
MbiI CCGCTC 2 cut(s) 95, 492
MboI GATC 2 cut(s) 792, 822
MboII GAAGA 7 cut(s) 111, 293, 772, 802, 850, 853, 1212
MfeI CAATTG 1 cut(s) 44
MhlI GDGCHC 5 cut(s) 69, 735, 774, 891, 1097
MluCI AATT 2 cut(s) 44, 599
Mly113I GGCGCC 1 cut(s) 897
MlyI GAGTC 5 cut(s) 137, 398, 755, 902, 1169
MmeI TCCRAC 5 cut(s) 258, 288, 541, 685, 894
MroI TCCGGA 1 cut(s) 786
MseI TTAA 2 cut(s) 596, 803
MspA1I CMGCKG 1 cut(s) 1159
MspI CCGG 3 cut(s) 582, 787, 868
MspR9I CCNGG 1 cut(s) 563
MunI CAATTG 1 cut(s) 44
MvaI CCWGG 1 cut(s) 563
MwoI GCNNNNNNNGC 7 cut(s) 46, 242, 245, 383, 532, 1117, 1129
NarI GGCGCC 1 cut(s) 897
NdeII GATC 2 cut(s) 792, 822
NlaIII CATG 3 cut(s) 40, 448, 535
NlaIV GGNNCC 2 cut(s) 464, 898
NmeAIII GCCGAG 3 cut(s) 88, 594, 672
NmuCI GTSAC 2 cut(s) 584, 751
NotI GCGGCCGC 1 cut(s) 246
NspI RCATGY 1 cut(s) 40
NspV TTCGAA 1 cut(s) 538
PcsI WCGNNNNNNNCGW 4 cut(s) 756, 917, 929, 1035
PfeI GAWTC 3 cut(s) 360, 540, 1198
PflFI GACNNNGTC 1 cut(s) 656
PflMI CCANNNNNTGG 1 cut(s) 562
PinAI ACCGGT 2 cut(s) 581, 867
PkrI GCNGC 7 cut(s) 101, 223, 238, 247, 250, 927, 1122
Ple19I CGATCG 1 cut(s) 825
PleI GAGTC 5 cut(s) 137, 398, 755, 902, 1169
PluTI GGCGCC 1 cut(s) 900
PmaCI CACGTG 1 cut(s) 767
PmlI CACGTG 1 cut(s) 767
PpsI GAGTC 5 cut(s) 137, 398, 755, 902, 1169
Ppu21I YACGTR 1 cut(s) 767
Psp124BI GAGCTC 2 cut(s) 69, 774
Psp6I CCWGG 1 cut(s) 561
PspCI CACGTG 1 cut(s) 767
PspEI GGTNACC 2 cut(s) 584, 1151
PspFI CCCAGC 1 cut(s) 75
PspGI CCWGG 1 cut(s) 561
PspN4I GGNNCC 2 cut(s) 464, 898
PspPI GGNCC 3 cut(s) 462, 553, 565
PsyI GACNNNGTC 1 cut(s) 656
PvuI CGATCG 1 cut(s) 825
PvuII CAGCTG 1 cut(s) 1159
RsaI GTAC 1 cut(s) 1037
RsaNI GTAC 1 cut(s) 1036
SacI GAGCTC 2 cut(s) 69, 774
SaqAI TTAA 2 cut(s) 596, 803
SatI GCNGC 7 cut(s) 100, 222, 237, 246, 249, 926, 1121
Sau3AI GATC 2 cut(s) 792, 822
Sau96I GGNCC 3 cut(s) 462, 553, 565
SchI GAGTC 5 cut(s) 137, 398, 755, 902, 1169
ScrFI CCNGG 1 cut(s) 563
SduI GDGCHC 5 cut(s) 69, 735, 774, 891, 1097
SfaNI GCATC 2 cut(s) 260, 462
SfoI GGCGCC 1 cut(s) 898
SfuI TTCGAA 1 cut(s) 538
Sse9I AATT 2 cut(s) 44, 599
SspDI GGCGCC 1 cut(s) 896
SspMI CTAG 2 cut(s) 210, 216
SstI GAGCTC 2 cut(s) 69, 774
StyD4I CCNGG 1 cut(s) 561
StyI CCWWGG 1 cut(s) 5
TaaI ACNGT 2 cut(s) 514, 666
TaiI ACGT 4 cut(s) 769, 993, 1046, 1086
TaqI TCGA 4 cut(s) 393, 432, 538, 906
TasI AATT 2 cut(s) 44, 599
TauI GCSGC 5 cut(s) 102, 224, 239, 248, 251
TfiI GAWTC 3 cut(s) 360, 540, 1198
Tru1I TTAA 2 cut(s) 596, 803
Tru9I TTAA 2 cut(s) 596, 803
TscAI CASTG 3 cut(s) 247, 464, 474
TseFI GTSAC 2 cut(s) 584, 751
TseI GCWGC 2 cut(s) 925, 1120
Tsp45I GTSAC 2 cut(s) 584, 751
TspDTI ATGAA 2 cut(s) 343, 1124
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 3 cut(s) 247, 464, 474
Tth111I GACNNNGTC 1 cut(s) 656
Van91I CCANNNNNTGG 1 cut(s) 562
XapI RAATTY 1 cut(s) 599
XceI RCATGY 1 cut(s) 40
XspI CTAG 2 cut(s) 210, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.