Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0015917

Physical Location & Seq

Genomic Coordinates Forward (+)

83111859 .. 83114089

Gene Structure 2231 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG487000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGCTCATGGGTTCATTCAATTCTTCCCATCATCAAAGAATAGTACCTCAACAACAAGAAGACCAAGATCCAGAGATTCACCCAGATCTACAACTGTATAACCAGCACCACCACCAGTACCAGTTTGCTCAGCAGCCATTGTTAATGTCACGCGGATTGACCTCCCGGCAACTCCTCATCAGCTGCGCTGAGCTCATTTCTCAGCTCGACTTCTCGTCCGCTCGCCGCCTCATTTCCATTCTATCCTCCTCGAATTCCTCCCCTTACGGAGACTCCACCGAGAGACTAGTCCACCAGTTCGTTCGGGCCCTCTCTCTCCGCCTGCCTGCAGTGGAGGCGGCTCCACGAGAAATCGTGAGTGTTGCCGCCGCCACTGCATCATCCGCCTCCATCTCCACCTCCAACACGTTGCTGGAGGTGGAGACGGAAGCAGAAGAGGAGGCGCTTCAGTCGTGCTACCTAACCCTAAACCAGATAACCCCATTCATCAGGTTCAGCCACTTGACGGCGAATCAAGCCATCCTCGAAGCCATAGACTCAACTCACCACGCCATCCACATCCTCGACTTTGACATCAAACACGGCGTCCAATGGCCACCGTTGATGCAGGCCCTCGCGGAGAGATCCTACGGCTCAAGCTCATCTCTTCACCACCCTCCTCCGATGCTCCGCATCACCGCCACCGGTCGCGATCTCACTCTCCTCCGCCGAACCGGCGAGCGCCTCCTCCGGTTCGCCCAGTCTCTCGGCCTCACCTTCCACTTCCGCCCCATCGTTCTCTTAAACGACGTCGCAATGATCGACTACCTCAACCCGGCATCGCTCGGTCTCTTCTCTGACGAAGCCCTCGCCGTCAACTGCGTCCTCTACCTCCACAGACTCCTCACGGACGACGCACGTGACCTCCACCTCTTTCTCGACAAGATCAGAGGCTTGAACCCGAAGATAGTAACAGTAGCCGAGCGAGAAGCCAATCACAATAGCCCCATGTTTCTCAACAGGTTTGTCGAGGCGGTGGACCACTACGGCGCCGTTTTTGGCTCCTTGGAAGCTACCCTCCCGCCGAACAGCAGGGAGAGGCTGGCGGTGGAGCAGGTGTGGTTCGGAAGAGAGATTGCTGACGTGGCGGCGGCAGACGATGATCAAAGAAGAAAGCAGTTGAGGCATGAGAGATATGAGAATTGGGAGATGATGATGAGGAGGTCGGGGTTCTCGAATGTTCCGTTGAGTCCCTTCGCTCTTTCACAAGCGAAGCTTCTTCTCCGGCTTCACTACCCTTCCGAGGGTTACCAGCTTCACAGCCTCAAAGACTCGTTCTTCTTAGGTTGGATGAATCGTCCCCTTTTCTCAGTTTCTTCTTGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009888 GO:0009889 GO:0009933 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048367 GO:0048507 GO:0048532 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090506 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

455

Amino Acids

51.59

Weight (kDa)

6.18

Isoelectric Point (pI)

50.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	56 - 454	1.6e-112	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55580
fragaria_vesca	FvH4_3g41310
malus_domestica	MD03G1045700.v1.1 MD11G1047900.v1.1
prunus_persica	Prupe.6G037000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0074111
rosa_laevigata	RLG00000036456
rosa_multiflora	Rmu_sc0000573.1_g000063
rosa_roxburghii	Rroxscaffold_1G00007280
rosa_rugosa	Rorug05G0429200
rosa_samantha	Rh5AG487000 Rh5BG507300 Rh5CG530900 Rh5DG519700
rosa_wichuraiana	Rw5G045210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1084
AatII	GACGTC	1 cut(s)	792
Acc36I	ACCTGC	1 cut(s)	1084
AccB1I	GGYRCC	1 cut(s)	1028
AccBSI	CCGCTC	1 cut(s)	221
AccII	CGCG	3 cut(s)	153, 617, 690
AclWI	GGATC	2 cut(s)	62, 618
AcoI	YGGCCR	1 cut(s)	593
AcsI	RAATTY	1 cut(s)	253
AcuI	CTGAAG	1 cut(s)	431
AcvI	CACGTG	1 cut(s)	899
AcyI	GRCGYC	3 cut(s)	585, 789, 1029
AfaI	GTAC	2 cut(s)	45, 119
AfiI	CCNNNNNNNGG	4 cut(s)	505, 814, 1282, 1283
AflIII	ACRYGT	1 cut(s)	405
AgeI	ACCGGT	1 cut(s)	683
AgsI	TTSAA	2 cut(s)	19, 937
AhdI	GACNNNNNGTC	1 cut(s)	214
AhlI	ACTAGT	1 cut(s)	286
AjiI	CACGTC	1 cut(s)	1123
AluBI	AGCT	7 cut(s)	183, 193, 205, 639, 1052, 1255, 1294
AluI	AGCT	7 cut(s)	183, 193, 205, 639, 1052, 1255, 1294
Alw21I	GWGCWC	1 cut(s)	195
Alw26I	GTCTC	5 cut(s)	264, 277, 416, 747, 833
AlwI	GGATC	2 cut(s)	62, 618
AoxI	GGCC	4 cut(s)	306, 593, 609, 748
ApaI	GGGCCC	1 cut(s)	310
ApeKI	GCWGC	2 cut(s)	133, 183
ApoI	RAATTY	1 cut(s)	253
ArsI	GACNNNNNNTTYG	2 cut(s)	570, 602
AsiGI	ACCGGT	1 cut(s)	683
AspLEI	GCGC	4 cut(s)	188, 445, 723, 1031
AspS9I	GGNCC	4 cut(s)	306, 307, 610, 1018
AsuC2I	CCSGG	2 cut(s)	166, 815
AsuHPI	GGTGA	5 cut(s)	71, 536, 641, 667, 745
AvaII	GGWCC	1 cut(s)	1018
BaeGI	GKGCMC	1 cut(s)	310
BalI	TGGCCA	1 cut(s)	595
BanI	GGYRCC	1 cut(s)	1028
BanII	GRGCYC	2 cut(s)	195, 310
BauI	CACGAG	1 cut(s)	345
BbrPI	CACGTG	1 cut(s)	899
BbsI	GAAGAC	1 cut(s)	66
Bbv12I	GWGCWC	1 cut(s)	195
BbvI	GCAGC	2 cut(s)	145, 170
BccI	CCATC	5 cut(s)	36, 398, 527, 560, 779
BceAI	ACGGC	6 cut(s)	522, 598, 646, 836, 1016, 1042
BclI	TGATCA	1 cut(s)	1141
BcnI	CCSGG	2 cut(s)	166, 815
BcoDI	GTCTC	5 cut(s)	264, 277, 416, 747, 833
BcuI	ACTAGT	1 cut(s)	286
BfaI	CTAG	1 cut(s)	287
BfmI	CTRYAG	1 cut(s)	327
BfoI	RGCGCY	3 cut(s)	446, 724, 1032
BfuAI	ACCTGC	1 cut(s)	1084
BglI	GCCNNNNNGGC	1 cut(s)	714
BglII	AGATCT	1 cut(s)	85
BisI	GCNGC	8 cut(s)	134, 184, 226, 339, 366, 369, 1128, 1131
BlpI	GCTNAGC	2 cut(s)	129, 189
BlsI	GCNGC	8 cut(s)	135, 185, 227, 340, 367, 370, 1129, 1132
Bme1390I	CCNGG	2 cut(s)	166, 815
Bme18I	GGWCC	1 cut(s)	1018
BmeRI	GACNNNNNGTC	1 cut(s)	214
BmgBI	CACGTC	1 cut(s)	1123
BmgT120I	GGNCC	4 cut(s)	306, 307, 610, 1018
BmiI	GGNNCC	4 cut(s)	308, 342, 1030, 1042
BmrFI	CCNGG	2 cut(s)	166, 815
BmrI	ACTGGG	1 cut(s)	733
BmsI	GCATC	5 cut(s)	386, 594, 654, 681, 827
BmuI	ACTGGG	1 cut(s)	733
BpiI	GAAGAC	1 cut(s)	66
BpmI	CTGGAG	1 cut(s)	434
Bpu1102I	GCTNAGC	2 cut(s)	129, 189
BpuEI	CTTGAG	1 cut(s)	619
BpuMI	CCSGG	2 cut(s)	166, 815
BsaAI	YACGTR	1 cut(s)	899
BsaHI	GRCGYC	3 cut(s)	585, 789, 1029
BsaI	GGTCTC	1 cut(s)	833
BsaJI	CCNNGG	2 cut(s)	1044, 1281
BsaWI	WCCGGW	2 cut(s)	683, 729
BsaXI	ACNNNNNCTCC	6 cut(s)	257, 287, 888, 918, 1082, 1112
Bsc4I	CCNNNNNNNGG	4 cut(s)	505, 814, 1282, 1283
Bse118I	RCCGGY	2 cut(s)	683, 713
Bse1I	ACTGG	4 cut(s)	115, 121, 295, 739
Bse3DI	GCAATG	1 cut(s)	801
BseDI	CCNNGG	2 cut(s)	1044, 1281
BseGI	GGATG	5 cut(s)	380, 519, 552, 558, 1335
BseLI	CCNNNNNNNGG	4 cut(s)	505, 814, 1282, 1283
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	4 cut(s)	143, 180, 215, 1362
BseNI	ACTGG	4 cut(s)	115, 121, 295, 739
BseRI	GAGGAG	8 cut(s)	164, 238, 452, 648, 692, 716, 872, 1213
BseSI	GKGCMC	1 cut(s)	310
BseXI	GCAGC	2 cut(s)	145, 170
Bsh1236I	CGCG	3 cut(s)	153, 617, 690
Bsh1285I	CGRYCG	1 cut(s)	688
BshFI	GGCC	4 cut(s)	308, 595, 611, 750
BshNI	GGYRCC	1 cut(s)	1028
BshTI	ACCGGT	1 cut(s)	683
BsiEI	CGRYCG	1 cut(s)	688
BsiHKAI	GWGCWC	1 cut(s)	195
BsiSI	CCGG	6 cut(s)	166, 684, 714, 730, 815, 1264
BslFI	GGGAC	2 cut(s)	1215, 1323
BslI	CCNNNNNNNGG	4 cut(s)	505, 814, 1282, 1283
BsmAI	GTCTC	5 cut(s)	264, 277, 416, 747, 833
BsmBI	CGTCTC	1 cut(s)	416
BsmFI	GGGAC	2 cut(s)	1215, 1323
BsnI	GGCC	4 cut(s)	308, 595, 611, 750
Bso31I	GGTCTC	1 cut(s)	833
Bsp120I	GGGCCC	1 cut(s)	306
Bsp1286I	GDGCHC	2 cut(s)	195, 310
Bsp143I	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
Bsp1720I	GCTNAGC	2 cut(s)	129, 189
Bsp68I	TCGCGA	1 cut(s)	690
BspANI	GGCC	4 cut(s)	308, 595, 611, 750
BspCNI	CTCAG	4 cut(s)	142, 181, 214, 1361
BspFNI	CGCG	3 cut(s)	153, 617, 690
BspLI	GGNNCC	4 cut(s)	308, 342, 1030, 1042
BspMAI	CTGCAG	1 cut(s)	331
BspMI	ACCTGC	1 cut(s)	1084
BspPI	GGATC	2 cut(s)	62, 618
BspT107I	GGYRCC	1 cut(s)	1028
BspTNI	GGTCTC	1 cut(s)	833
BsrBI	CCGCTC	1 cut(s)	221
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	2 cut(s)	683, 713
BsrI	ACTGG	4 cut(s)	115, 121, 295, 739
BssAI	RCCGGY	2 cut(s)	683, 713
BssECI	CCNNGG	2 cut(s)	1044, 1281
BssMI	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
BssNI	GRCGYC	3 cut(s)	585, 789, 1029
BssSI	CACGAG	1 cut(s)	345
BssT1I	CCWWGG	1 cut(s)	1044
Bst2BI	CACGAG	1 cut(s)	345
Bst4CI	ACNGT	3 cut(s)	96, 600, 955
Bst6I	CTCTTC	4 cut(s)	429, 651, 836, 1102
BstACI	GRCGYC	3 cut(s)	585, 789, 1029
BstBAI	YACGTR	1 cut(s)	899
BstC8I	GCNNGC	6 cut(s)	223, 323, 327, 609, 719, 1083
BstDEI	CTNAG	5 cut(s)	129, 189, 201, 1321, 1348
BstEII	GGTNACC	1 cut(s)	1286
BstF5I	GGATG	5 cut(s)	380, 519, 552, 558, 1335
BstFNI	CGCG	3 cut(s)	153, 617, 690
BstH2I	RGCGCY	3 cut(s)	446, 724, 1032
BstHHI	GCGC	4 cut(s)	188, 445, 723, 1031
BstKTI	GATC	7 cut(s)	70, 88, 626, 694, 801, 927, 1144
BstMAI	GTCTC	5 cut(s)	264, 277, 416, 747, 833
BstMBI	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
BstMCI	CGRYCG	1 cut(s)	688
BstMWI	GCNNNNNNNGC	7 cut(s)	335, 374, 383, 515, 714, 1124, 1162
BstPI	GGTNACC	1 cut(s)	1286
BstSCI	CCNGG	2 cut(s)	164, 813
BstSFI	CTRYAG	1 cut(s)	327
BstSLI	GKGCMC	1 cut(s)	310
BstUI	CGCG	3 cut(s)	153, 617, 690
BstV1I	GCAGC	2 cut(s)	145, 170
BstV2I	GAAGAC	1 cut(s)	66
BstX2I	RGATCY	3 cut(s)	67, 85, 623
BstYI	RGATCY	3 cut(s)	67, 85, 623
BsuRI	GGCC	4 cut(s)	308, 595, 611, 750
BtgZI	GCGATG	1 cut(s)	804
BtrI	CACGTC	1 cut(s)	1123
BtsCI	GGATG	5 cut(s)	380, 519, 552, 558, 1335
BtsI	GCAGTG	2 cut(s)	336, 372
BtsIMutI	CAGTG	2 cut(s)	336, 372
BtuMI	TCGCGA	1 cut(s)	690
BveI	ACCTGC	1 cut(s)	1084
Cac8I	GCNNGC	6 cut(s)	223, 323, 327, 609, 719, 1083
CfoI	GCGC	4 cut(s)	188, 445, 723, 1031
Cfr10I	RCCGGY	2 cut(s)	683, 713
Cfr13I	GGNCC	4 cut(s)	306, 307, 610, 1018
CseI	GACGC	3 cut(s)	574, 850, 902
Csp6I	GTAC	2 cut(s)	44, 118
CspAI	ACCGGT	1 cut(s)	683
CviAII	CATG	3 cut(s)	7, 988, 1166
CviQI	GTAC	2 cut(s)	44, 118
DdeI	CTNAG	5 cut(s)	129, 189, 201, 1321, 1348
DinI	GGCGCC	1 cut(s)	1030
DpnI	GATC	7 cut(s)	69, 87, 625, 693, 800, 926, 1143
DpnII	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
DriI	GACNNNNNGTC	1 cut(s)	214
EaeI	YGGCCR	1 cut(s)	593
Eam1104I	CTCTTC	4 cut(s)	429, 651, 836, 1102
Eam1105I	GACNNNNNGTC	1 cut(s)	214
EarI	CTCTTC	4 cut(s)	429, 651, 836, 1102
EciI	GGCGGA	4 cut(s)	308, 373, 695, 755
Ecl136II	GAGCTC	1 cut(s)	193
Eco130I	CCWWGG	1 cut(s)	1044
Eco24I	GRGCYC	2 cut(s)	195, 310
Eco31I	GGTCTC	1 cut(s)	833
Eco47I	GGWCC	1 cut(s)	1018
Eco53kI	GAGCTC	1 cut(s)	193
Eco57I	CTGAAG	1 cut(s)	431
Eco72I	CACGTG	1 cut(s)	899
Eco91I	GGTNACC	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	193
EcoO109I	RGGNCCY	2 cut(s)	307, 610
EcoO65I	GGTNACC	1 cut(s)	1286
EcoRI	GAATTC	1 cut(s)	253
EcoT14I	CCWWGG	1 cut(s)	1044
EcoT38I	GRGCYC	2 cut(s)	195, 310
EgeI	GGCGCC	1 cut(s)	1030
EheI	GGCGCC	1 cut(s)	1030
ErhI	CCWWGG	1 cut(s)	1044
Esp3I	CGTCTC	1 cut(s)	416
FaeI	CATG	3 cut(s)	10, 991, 1169
FaiI	YATR	6 cut(s)	8, 99, 533, 989, 1167, 1176
FalI	AAGNNNNNCTT	2 cut(s)	1239, 1271
FaqI	GGGAC	2 cut(s)	1215, 1323
FatI	CATG	3 cut(s)	6, 987, 1165
FauI	CCCGC	1 cut(s)	1068
FbaI	TGATCA	1 cut(s)	1141
Fnu4HI	GCNGC	8 cut(s)	134, 184, 226, 339, 366, 369, 1128, 1131
FokI	GGATG	5 cut(s)	367, 506, 539, 545, 1342
FriOI	GRGCYC	2 cut(s)	195, 310
Fsp4HI	GCNGC	8 cut(s)	134, 184, 226, 339, 366, 369, 1128, 1131
FspBI	CTAG	1 cut(s)	287
GlaI	GCGC	4 cut(s)	187, 444, 722, 1030
GluI	GCNGC	8 cut(s)	134, 184, 226, 339, 366, 369, 1128, 1131
GsuI	CTGGAG	1 cut(s)	434
HaeII	RGCGCY	3 cut(s)	446, 724, 1032
HaeIII	GGCC	4 cut(s)	308, 595, 611, 750
HapII	CCGG	6 cut(s)	166, 684, 714, 730, 815, 1264
HgaI	GACGC	3 cut(s)	574, 850, 902
HhaI	GCGC	4 cut(s)	188, 445, 723, 1031
Hin1I	GRCGYC	3 cut(s)	585, 789, 1029
Hin1II	CATG	3 cut(s)	10, 991, 1169
Hin6I	GCGC	4 cut(s)	186, 443, 721, 1029
HinP1I	GCGC	4 cut(s)	186, 443, 721, 1029
HincII	GTYRAC	1 cut(s)	856
HindII	GTYRAC	1 cut(s)	856
HindIII	AAGCTT	1 cut(s)	1253
HinfI	GANTC	8 cut(s)	76, 272, 511, 536, 879, 1228, 1310, 1333
HpaII	CCGG	6 cut(s)	166, 684, 714, 730, 815, 1264
HphI	GGTGA	5 cut(s)	71, 536, 641, 667, 745
Hpy166II	GTNNAC	3 cut(s)	292, 856, 1018
Hpy188I	TCNGA	5 cut(s)	663, 838, 929, 1106, 1282
Hpy188III	TCNNGA	5 cut(s)	71, 355, 689, 917, 1213
Hpy8I	GTNNAC	3 cut(s)	292, 856, 1018
Hpy99I	CGWCG	3 cut(s)	791, 794, 896
HpyAV	CCTTC	3 cut(s)	766, 1243, 1287
HpyCH4III	ACNGT	3 cut(s)	96, 600, 955
HpyCH4IV	ACGT	4 cut(s)	407, 789, 898, 1122
HpyCH4V	TGCA	3 cut(s)	329, 377, 607
HpyF10VI	GCNNNNNNNGC	7 cut(s)	335, 374, 383, 515, 714, 1124, 1162
HpyF3I	CTNAG	5 cut(s)	129, 189, 201, 1321, 1348
HpySE526I	ACGT	4 cut(s)	407, 789, 898, 1122
Hsp92I	GRCGYC	3 cut(s)	585, 789, 1029
Hsp92II	CATG	3 cut(s)	10, 991, 1169
HspAI	GCGC	4 cut(s)	186, 443, 721, 1029
KasI	GGCGCC	1 cut(s)	1028
Ksp22I	TGATCA	1 cut(s)	1141
Kzo9I	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
LmnI	GCTCC	4 cut(s)	346, 672, 1046, 1090
Lsp1109I	GCAGC	2 cut(s)	145, 170
LweI	GCATC	5 cut(s)	386, 594, 654, 681, 827
MaeI	CTAG	1 cut(s)	287
MaeII	ACGT	4 cut(s)	407, 789, 898, 1122
MaeIII	GTNAC	4 cut(s)	147, 899, 949, 1286
MalI	GATC	7 cut(s)	69, 87, 625, 693, 800, 926, 1143
MbiI	CCGCTC	1 cut(s)	221
MboI	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
MflI	RGATCY	3 cut(s)	67, 85, 623
MhlI	GDGCHC	2 cut(s)	195, 310
MlsI	TGGCCA	1 cut(s)	595
MluCI	AATT	3 cut(s)	19, 253, 1180
MluNI	TGGCCA	1 cut(s)	595
Mly113I	GGCGCC	1 cut(s)	1029
MlyI	GAGTC	5 cut(s)	266, 530, 873, 1237, 1304
MmeI	TCCRAC	2 cut(s)	426, 1307
Mox20I	TGGCCA	1 cut(s)	595
MscI	TGGCCA	1 cut(s)	595
MseI	TTAA	2 cut(s)	143, 782
Msp20I	TGGCCA	1 cut(s)	595
MspA1I	CMGCKG	1 cut(s)	183
MspI	CCGG	6 cut(s)	166, 684, 714, 730, 815, 1264
MspR9I	CCNGG	2 cut(s)	166, 815
MvnI	CGCG	3 cut(s)	153, 617, 690
MwoI	GCNNNNNNNGC	7 cut(s)	335, 374, 383, 515, 714, 1124, 1162
NarI	GGCGCC	1 cut(s)	1029
NciI	CCSGG	2 cut(s)	166, 815
NdeII	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
NlaIII	CATG	3 cut(s)	10, 991, 1169
NlaIV	GGNNCC	4 cut(s)	308, 342, 1030, 1042
NmeAIII	GCCGAG	2 cut(s)	726, 985
NmuCI	GTSAC	2 cut(s)	147, 899
NruI	TCGCGA	1 cut(s)	690
PaqCI	CACCTGC	1 cut(s)	1084
PcsI	WCGNNNNNNNCGW	3 cut(s)	798, 1211, 1220
PfeI	GAWTC	3 cut(s)	76, 511, 1333
PinAI	ACCGGT	1 cut(s)	683
PkrI	GCNGC	8 cut(s)	135, 185, 227, 340, 367, 370, 1129, 1132
PleI	GAGTC	5 cut(s)	266, 530, 873, 1236, 1304
PluTI	GGCGCC	1 cut(s)	1032
PmaCI	CACGTG	1 cut(s)	899
PmlI	CACGTG	1 cut(s)	899
PpsI	GAGTC	5 cut(s)	266, 530, 873, 1236, 1304
Ppu21I	YACGTR	1 cut(s)	899
Psp124BI	GAGCTC	1 cut(s)	195
PspCI	CACGTG	1 cut(s)	899
PspEI	GGTNACC	1 cut(s)	1286
PspN4I	GGNNCC	4 cut(s)	308, 342, 1030, 1042
PspOMI	GGGCCC	1 cut(s)	306
PspPI	GGNCC	4 cut(s)	306, 307, 610, 1018
PstI	CTGCAG	1 cut(s)	331
PsuI	RGATCY	3 cut(s)	67, 85, 623
PvuII	CAGCTG	1 cut(s)	183
RruI	TCGCGA	1 cut(s)	690
RsaI	GTAC	2 cut(s)	45, 119
RsaNI	GTAC	2 cut(s)	44, 118
SacI	GAGCTC	1 cut(s)	195
SaqAI	TTAA	2 cut(s)	143, 782
SatI	GCNGC	8 cut(s)	134, 184, 226, 339, 366, 369, 1128, 1131
Sau3AI	GATC	7 cut(s)	67, 85, 623, 691, 798, 924, 1141
Sau96I	GGNCC	4 cut(s)	306, 307, 610, 1018
SchI	GAGTC	5 cut(s)	266, 530, 873, 1237, 1304
ScrFI	CCNGG	2 cut(s)	166, 815
SduI	GDGCHC	2 cut(s)	195, 310
SfaNI	GCATC	5 cut(s)	386, 594, 654, 681, 827
SfcI	CTRYAG	1 cut(s)	327
SfoI	GGCGCC	1 cut(s)	1030
SinI	GGWCC	1 cut(s)	1018
SmlI	CTYRAG	1 cut(s)	634
SmoI	CTYRAG	1 cut(s)	634
SpeI	ACTAGT	1 cut(s)	286
Sse9I	AATT	3 cut(s)	19, 253, 1180
SspDI	GGCGCC	1 cut(s)	1028
SspMI	CTAG	1 cut(s)	287
SstI	GAGCTC	1 cut(s)	195
StyD4I	CCNGG	2 cut(s)	164, 813
StyI	CCWWGG	1 cut(s)	1044
TaaI	ACNGT	3 cut(s)	96, 600, 955
TaiI	ACGT	4 cut(s)	410, 792, 901, 1125
TaqI	TCGA	8 cut(s)	207, 251, 525, 564, 801, 918, 1008, 1214
TaqII	GACCGA	1 cut(s)	815
TasI	AATT	3 cut(s)	19, 253, 1180
TauI	GCSGC	6 cut(s)	228, 341, 368, 371, 1130, 1133
TfiI	GAWTC	3 cut(s)	76, 511, 1333
Tru1I	TTAA	2 cut(s)	143, 782
Tru9I	TTAA	2 cut(s)	143, 782
TscAI	CASTG	2 cut(s)	336, 379
TseFI	GTSAC	2 cut(s)	147, 899
TseI	GCWGC	2 cut(s)	133, 183
Tsp45I	GTSAC	2 cut(s)	147, 899
TspDTI	ATGAA	2 cut(s)	475, 1346
TspGWI	ACGGA	4 cut(s)	282, 440, 902, 1212
TspRI	CASTG	2 cut(s)	336, 379
VpaK11BI	GGWCC	1 cut(s)	1018
XapI	RAATTY	1 cut(s)	253
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XspI	CTAG	1 cut(s)	287
ZraI	GACGTC	1 cut(s)	790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.