28S ribosomal protein S29
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16870 |
| fragaria_vesca | FvH4_3g39930 FvH4_3g39930 |
| malus_domestica | MD03G1058000.v1.1 MD11G1060300.v1.1 |
| prunus_persica | Prupe.6G046100_v2.0.a1 |
| pyrus_communis | pycom03g04630 pycom11g04980 |
| rosa_chinensis | RchiOBHm_Chr5g0071911 RchiOBHm_Chr5g0071921 |
| rosa_laevigata | RLG00000036262 |
| rosa_multiflora | Rmu_sc0002149.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00009260 |
| rosa_rugosa | Rorug05G0415600 Rorug05G0415700 |
| rosa_samantha | Rh5AG471600 Rh5BG491500 Rh5CG515400 Rh5DG503000 |
| rosa_wichuraiana | Rw5G043830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 180 |
| AccI | GTMKAC | 1 cut(s) | 180 |
| AccII | CGCG | 5 cut(s) | 185, 310, 597, 1112, 1179 |
| AciI | CCGC | 5 cut(s) | 7, 153, 185, 597, 1345 |
| AclWI | GGATC | 5 cut(s) | 233, 473, 479, 486, 770 |
| AcoI | YGGCCR | 1 cut(s) | 265 |
| AcsI | RAATTY | 1 cut(s) | 731 |
| AcuI | CTGAAG | 1 cut(s) | 737 |
| AcyI | GRCGYC | 3 cut(s) | 165, 177, 318 |
| AfaI | GTAC | 1 cut(s) | 511 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 267, 677 |
| AgsI | TTSAA | 6 cut(s) | 334, 355, 576, 587, 855, 1125 |
| AjnI | CCWGG | 1 cut(s) | 867 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 900, 932 |
| AluBI | AGCT | 8 cut(s) | 81, 304, 337, 441, 902, 987, 1141, 1217 |
| AluI | AGCT | 8 cut(s) | 81, 304, 337, 441, 902, 987, 1141, 1217 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| AlwI | GGATC | 5 cut(s) | 233, 473, 479, 486, 770 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 639, 1022, 1217 |
| Ama87I | CYCGRG | 1 cut(s) | 368 |
| AoxI | GGCC | 3 cut(s) | 257, 265, 269 |
| ApaI | GGGCCC | 1 cut(s) | 261 |
| ApeKI | GCWGC | 4 cut(s) | 149, 899, 1211, 1214 |
| ApoI | RAATTY | 1 cut(s) | 731 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 711, 722 |
| AspLEI | GCGC | 3 cut(s) | 312, 422, 1112 |
| AspS9I | GGNCC | 4 cut(s) | 9, 257, 258, 542 |
| AsuHPI | GGTGA | 3 cut(s) | 121, 403, 1078 |
| AvaI | CYCGRG | 1 cut(s) | 368 |
| AvaII | GGWCC | 2 cut(s) | 9, 542 |
| BaeGI | GKGCMC | 1 cut(s) | 261 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 501, 534 |
| BamHI | GGATCC | 1 cut(s) | 478 |
| BanII | GRGCYC | 2 cut(s) | 261, 595 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1125, 1157, 1274, 1306 |
| BauI | CACGAG | 1 cut(s) | 207 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BbvI | GCAGC | 4 cut(s) | 161, 911, 1223, 1226 |
| BceAI | ACGGC | 5 cut(s) | 84, 152, 364, 407, 1239 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 15, 49 |
| BciT130I | CCWGG | 1 cut(s) | 869 |
| BclI | TGATCA | 1 cut(s) | 973 |
| BfaI | CTAG | 1 cut(s) | 428 |
| BfmI | CTRYAG | 2 cut(s) | 147, 1167 |
| BfoI | RGCGCY | 1 cut(s) | 423 |
| BglII | AGATCT | 1 cut(s) | 1079 |
| BisI | GCNGC | 6 cut(s) | 150, 153, 186, 900, 1212, 1215 |
| BlsI | GCNGC | 6 cut(s) | 151, 154, 187, 901, 1213, 1216 |
| Bme1390I | CCNGG | 1 cut(s) | 869 |
| Bme18I | GGWCC | 2 cut(s) | 9, 542 |
| BmeT110I | CYCGRG | 1 cut(s) | 368 |
| BmgT120I | GGNCC | 4 cut(s) | 9, 257, 258, 542 |
| BmiI | GGNNCC | 4 cut(s) | 11, 258, 259, 480 |
| BmrFI | CCNGG | 1 cut(s) | 869 |
| BmsI | GCATC | 2 cut(s) | 1162, 1332 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 553, 585 |
| BpuEI | CTTGAG | 1 cut(s) | 323 |
| BsaHI | GRCGYC | 3 cut(s) | 165, 177, 318 |
| BsaJI | CCNNGG | 5 cut(s) | 44, 56, 90, 369, 834 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 271, 301, 308, 338, 900, 930 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 267, 677 |
| Bse118I | RCCGGY | 2 cut(s) | 216, 267 |
| Bse1I | ACTGG | 3 cut(s) | 644, 1016, 1283 |
| Bse3DI | GCAATG | 3 cut(s) | 417, 485, 846 |
| BseBI | CCWGG | 1 cut(s) | 869 |
| BseDI | CCNNGG | 5 cut(s) | 44, 56, 90, 369, 834 |
| BseGI | GGATG | 3 cut(s) | 393, 815, 819 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 267, 677 |
| BseMI | GCAATG | 3 cut(s) | 417, 485, 846 |
| BseMII | CTCAG | 1 cut(s) | 314 |
| BseNI | ACTGG | 3 cut(s) | 644, 1016, 1283 |
| BseRI | GAGGAG | 1 cut(s) | 1286 |
| BseSI | GKGCMC | 1 cut(s) | 261 |
| BseXI | GCAGC | 4 cut(s) | 161, 911, 1223, 1226 |
| Bsh1236I | CGCG | 5 cut(s) | 185, 310, 597, 1112, 1179 |
| BshFI | GGCC | 3 cut(s) | 259, 267, 271 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BsiHKCI | CYCGRG | 1 cut(s) | 368 |
| BsiSI | CCGG | 2 cut(s) | 217, 268 |
| BslFI | GGGAC | 3 cut(s) | 608, 650, 701 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 267, 677 |
| BsmFI | GGGAC | 3 cut(s) | 608, 650, 701 |
| BsmI | GAATGC | 1 cut(s) | 1262 |
| BsnI | GGCC | 3 cut(s) | 259, 267, 271 |
| BsoBI | CYCGRG | 1 cut(s) | 368 |
| Bsp120I | GGGCCC | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 3 cut(s) | 214, 261, 595 |
| Bsp143I | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| Bsp19I | CCATGG | 1 cut(s) | 834 |
| BspACI | CCGC | 5 cut(s) | 7, 153, 185, 597, 1345 |
| BspANI | GGCC | 3 cut(s) | 259, 267, 271 |
| BspCNI | CTCAG | 1 cut(s) | 313 |
| BspFNI | CGCG | 5 cut(s) | 185, 310, 597, 1112, 1179 |
| BspLI | GGNNCC | 4 cut(s) | 11, 258, 259, 480 |
| BspMAI | CTGCAG | 1 cut(s) | 151 |
| BspPI | GGATC | 5 cut(s) | 233, 473, 479, 486, 770 |
| BspQI | GCTCTTC | 1 cut(s) | 1005 |
| BsrDI | GCAATG | 3 cut(s) | 417, 485, 846 |
| BsrFI | RCCGGY | 2 cut(s) | 216, 267 |
| BsrI | ACTGG | 3 cut(s) | 644, 1016, 1283 |
| BssAI | RCCGGY | 2 cut(s) | 216, 267 |
| BssECI | CCNNGG | 5 cut(s) | 44, 56, 90, 369, 834 |
| BssMI | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| BssNI | GRCGYC | 3 cut(s) | 165, 177, 318 |
| BssSI | CACGAG | 1 cut(s) | 207 |
| BssT1I | CCWWGG | 3 cut(s) | 44, 90, 834 |
| Bst2BI | CACGAG | 1 cut(s) | 207 |
| Bst2UI | CCWGG | 1 cut(s) | 869 |
| Bst4CI | ACNGT | 4 cut(s) | 109, 542, 1024, 1066 |
| Bst6I | CTCTTC | 3 cut(s) | 197, 499, 1005 |
| BstACI | GRCGYC | 3 cut(s) | 165, 177, 318 |
| BstC8I | GCNNGC | 7 cut(s) | 214, 218, 269, 322, 595, 1177, 1362 |
| BstDEI | CTNAG | 2 cut(s) | 300, 1235 |
| BstDSI | CCRYGG | 2 cut(s) | 56, 834 |
| BstF5I | GGATG | 3 cut(s) | 393, 815, 819 |
| BstFNI | CGCG | 5 cut(s) | 185, 310, 597, 1112, 1179 |
| BstH2I | RGCGCY | 1 cut(s) | 423 |
| BstHHI | GCGC | 3 cut(s) | 312, 422, 1112 |
| BstKTI | GATC | 7 cut(s) | 241, 451, 474, 481, 778, 976, 1082 |
| BstMBI | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1162, 1342 |
| BstNI | CCWGG | 1 cut(s) | 869 |
| BstNSI | RCATGY | 1 cut(s) | 1049 |
| BstSCI | CCNGG | 1 cut(s) | 867 |
| BstSFI | CTRYAG | 2 cut(s) | 147, 1167 |
| BstSLI | GKGCMC | 1 cut(s) | 261 |
| BstUI | CGCG | 5 cut(s) | 185, 310, 597, 1112, 1179 |
| BstV1I | GCAGC | 4 cut(s) | 161, 911, 1223, 1226 |
| BstX2I | RGATCY | 2 cut(s) | 478, 1079 |
| BstYI | RGATCY | 2 cut(s) | 478, 1079 |
| BsuRI | GGCC | 3 cut(s) | 259, 267, 271 |
| BtgI | CCRYGG | 2 cut(s) | 56, 834 |
| BtsCI | GGATG | 3 cut(s) | 393, 815, 819 |
| BtsI | GCAGTG | 1 cut(s) | 279 |
| BtsIMutI | CAGTG | 2 cut(s) | 279, 1006 |
| Cac8I | GCNNGC | 7 cut(s) | 214, 218, 269, 322, 595, 1177, 1362 |
| CaiI | CAGNNNCTG | 3 cut(s) | 639, 1022, 1217 |
| CfoI | GCGC | 3 cut(s) | 312, 422, 1112 |
| Cfr10I | RCCGGY | 2 cut(s) | 216, 267 |
| Cfr13I | GGNCC | 4 cut(s) | 9, 257, 258, 542 |
| CseI | GACGC | 4 cut(s) | 173, 191, 326, 416 |
| CsiI | ACCWGGT | 1 cut(s) | 867 |
| Csp6I | GTAC | 1 cut(s) | 510 |
| CviAII | CATG | 5 cut(s) | 50, 835, 896, 1046, 1091 |
| CviQI | GTAC | 1 cut(s) | 510 |
| DdeI | CTNAG | 2 cut(s) | 300, 1235 |
| DpnI | GATC | 7 cut(s) | 240, 450, 473, 480, 777, 975, 1081 |
| DpnII | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| DraI | TTTAAA | 1 cut(s) | 750 |
| EaeI | YGGCCR | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 3 cut(s) | 197, 499, 1005 |
| EarI | CTCTTC | 3 cut(s) | 197, 499, 1005 |
| Eco130I | CCWWGG | 3 cut(s) | 44, 90, 834 |
| Eco24I | GRGCYC | 2 cut(s) | 261, 595 |
| Eco32I | GATATC | 1 cut(s) | 952 |
| Eco47I | GGWCC | 2 cut(s) | 9, 542 |
| Eco57I | CTGAAG | 1 cut(s) | 737 |
| Eco88I | CYCGRG | 1 cut(s) | 368 |
| EcoO109I | RGGNCCY | 1 cut(s) | 257 |
| EcoRII | CCWGG | 1 cut(s) | 867 |
| EcoRV | GATATC | 1 cut(s) | 952 |
| EcoT14I | CCWWGG | 3 cut(s) | 44, 90, 834 |
| EcoT38I | GRGCYC | 2 cut(s) | 261, 595 |
| ErhI | CCWWGG | 3 cut(s) | 44, 90, 834 |
| FaeI | CATG | 5 cut(s) | 53, 838, 899, 1049, 1094 |
| FaqI | GGGAC | 3 cut(s) | 608, 650, 701 |
| FatI | CATG | 5 cut(s) | 49, 834, 895, 1045, 1090 |
| FauI | CCCGC | 2 cut(s) | 590, 1338 |
| FbaI | TGATCA | 1 cut(s) | 973 |
| FblI | GTMKAC | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 6 cut(s) | 150, 153, 186, 900, 1212, 1215 |
| FokI | GGATG | 3 cut(s) | 400, 822, 826 |
| FriOI | GRGCYC | 2 cut(s) | 261, 595 |
| FseI | GGCCGGCC | 1 cut(s) | 271 |
| Fsp4HI | GCNGC | 6 cut(s) | 150, 153, 186, 900, 1212, 1215 |
| FspBI | CTAG | 1 cut(s) | 428 |
| GlaI | GCGC | 3 cut(s) | 311, 421, 1111 |
| GluI | GCNGC | 6 cut(s) | 150, 153, 186, 900, 1212, 1215 |
| HaeII | RGCGCY | 1 cut(s) | 423 |
| HaeIII | GGCC | 3 cut(s) | 259, 267, 271 |
| HapII | CCGG | 2 cut(s) | 217, 268 |
| HgaI | GACGC | 4 cut(s) | 173, 191, 326, 416 |
| HhaI | GCGC | 3 cut(s) | 312, 422, 1112 |
| Hin1I | GRCGYC | 3 cut(s) | 165, 177, 318 |
| Hin1II | CATG | 5 cut(s) | 53, 838, 899, 1049, 1094 |
| Hin6I | GCGC | 3 cut(s) | 310, 420, 1110 |
| HinP1I | GCGC | 3 cut(s) | 310, 420, 1110 |
| HincII | GTYRAC | 1 cut(s) | 181 |
| HindII | GTYRAC | 1 cut(s) | 181 |
| HindIII | AAGCTT | 1 cut(s) | 1139 |
| HinfI | GANTC | 2 cut(s) | 740, 882 |
| HpaII | CCGG | 2 cut(s) | 217, 268 |
| HphI | GGTGA | 3 cut(s) | 121, 403, 1078 |
| Hpy166II | GTNNAC | 4 cut(s) | 181, 279, 993, 1183 |
| Hpy188I | TCNGA | 4 cut(s) | 175, 291, 455, 717 |
| Hpy188III | TCNNGA | 4 cut(s) | 340, 446, 727, 1148 |
| Hpy8I | GTNNAC | 4 cut(s) | 181, 279, 993, 1183 |
| Hpy99I | CGWCG | 8 cut(s) | 24, 76, 109, 167, 182, 185, 200, 247 |
| HpyAV | CCTTC | 8 cut(s) | 23, 109, 118, 388, 596, 712, 922, 1063 |
| HpyCH4III | ACNGT | 4 cut(s) | 109, 542, 1024, 1066 |
| HpyCH4IV | ACGT | 2 cut(s) | 177, 995 |
| HpyCH4V | TGCA | 6 cut(s) | 149, 415, 490, 899, 968, 1360 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1162, 1342 |
| HpyF3I | CTNAG | 2 cut(s) | 300, 1235 |
| HpySE526I | ACGT | 2 cut(s) | 177, 995 |
| Hsp92I | GRCGYC | 3 cut(s) | 165, 177, 318 |
| Hsp92II | CATG | 5 cut(s) | 53, 838, 899, 1049, 1094 |
| HspAI | GCGC | 3 cut(s) | 310, 420, 1110 |
| KroI | GCCGGC | 2 cut(s) | 216, 267 |
| KroNI | GCCGGC | 2 cut(s) | 218, 269 |
| Ksp22I | TGATCA | 1 cut(s) | 973 |
| Kzo9I | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| LguI | GCTCTTC | 1 cut(s) | 1005 |
| LmnI | GCTCC | 2 cut(s) | 329, 1313 |
| Lsp1109I | GCAGC | 4 cut(s) | 161, 911, 1223, 1226 |
| LweI | GCATC | 2 cut(s) | 1162, 1332 |
| MabI | ACCWGGT | 1 cut(s) | 867 |
| MaeI | CTAG | 1 cut(s) | 428 |
| MaeII | ACGT | 2 cut(s) | 177, 995 |
| MaeIII | GTNAC | 1 cut(s) | 1018 |
| MalI | GATC | 7 cut(s) | 240, 450, 473, 480, 777, 975, 1081 |
| MboI | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| MboII | GAAGA | 7 cut(s) | 8, 124, 133, 184, 486, 1022, 1294 |
| MfeI | CAATTG | 2 cut(s) | 755, 969 |
| MflI | RGATCY | 2 cut(s) | 478, 1079 |
| MhlI | GDGCHC | 3 cut(s) | 214, 261, 595 |
| MluCI | AATT | 7 cut(s) | 350, 460, 731, 755, 825, 969, 1320 |
| MmeI | TCCRAC | 4 cut(s) | 314, 516, 787, 886 |
| MroNI | GCCGGC | 2 cut(s) | 216, 267 |
| MroXI | GAANNNNTTC | 2 cut(s) | 711, 722 |
| MseI | TTAA | 2 cut(s) | 735, 749 |
| MslI | CAYNNNNRTG | 2 cut(s) | 839, 894 |
| MspA1I | CMGCKG | 2 cut(s) | 902, 1217 |
| MspI | CCGG | 2 cut(s) | 217, 268 |
| MspR9I | CCNGG | 1 cut(s) | 869 |
| MunI | CAATTG | 2 cut(s) | 755, 969 |
| Mva1269I | GAATGC | 1 cut(s) | 1262 |
| MvaI | CCWGG | 1 cut(s) | 869 |
| MvnI | CGCG | 5 cut(s) | 185, 310, 597, 1112, 1179 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1162, 1342 |
| NaeI | GCCGGC | 2 cut(s) | 218, 269 |
| NcoI | CCATGG | 1 cut(s) | 834 |
| NdeII | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| NgoMIV | GCCGGC | 2 cut(s) | 216, 267 |
| NlaIII | CATG | 5 cut(s) | 53, 838, 899, 1049, 1094 |
| NlaIV | GGNNCC | 4 cut(s) | 11, 258, 259, 480 |
| NspI | RCATGY | 1 cut(s) | 1049 |
| PciSI | GCTCTTC | 1 cut(s) | 1005 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1033 |
| PctI | GAATGC | 1 cut(s) | 1262 |
| PdiI | GCCGGC | 2 cut(s) | 218, 269 |
| PdmI | GAANNNNTTC | 2 cut(s) | 711, 722 |
| PfeI | GAWTC | 2 cut(s) | 740, 882 |
| PkrI | GCNGC | 6 cut(s) | 151, 154, 187, 901, 1213, 1216 |
| Psp6I | CCWGG | 1 cut(s) | 867 |
| PspGI | CCWGG | 1 cut(s) | 867 |
| PspN4I | GGNNCC | 4 cut(s) | 11, 258, 259, 480 |
| PspOMI | GGGCCC | 1 cut(s) | 257 |
| PspPI | GGNCC | 4 cut(s) | 9, 257, 258, 542 |
| PstI | CTGCAG | 1 cut(s) | 151 |
| PstNI | CAGNNNCTG | 3 cut(s) | 639, 1022, 1217 |
| PsuI | RGATCY | 2 cut(s) | 478, 1079 |
| PvuII | CAGCTG | 2 cut(s) | 902, 1217 |
| RigI | GGCCGGCC | 1 cut(s) | 271 |
| RsaI | GTAC | 1 cut(s) | 511 |
| RsaNI | GTAC | 1 cut(s) | 510 |
| RseI | CAYNNNNRTG | 2 cut(s) | 839, 894 |
| SalI | GTCGAC | 1 cut(s) | 179 |
| SapI | GCTCTTC | 1 cut(s) | 1005 |
| SaqAI | TTAA | 2 cut(s) | 735, 749 |
| SatI | GCNGC | 6 cut(s) | 150, 153, 186, 900, 1212, 1215 |
| Sau3AI | GATC | 7 cut(s) | 238, 448, 471, 478, 775, 973, 1079 |
| Sau96I | GGNCC | 4 cut(s) | 9, 257, 258, 542 |
| ScrFI | CCNGG | 1 cut(s) | 869 |
| SduI | GDGCHC | 3 cut(s) | 214, 261, 595 |
| SexAI | ACCWGGT | 1 cut(s) | 867 |
| SfaNI | GCATC | 2 cut(s) | 1162, 1332 |
| SfcI | CTRYAG | 2 cut(s) | 147, 1167 |
| SgrDI | CGTCGACG | 1 cut(s) | 179 |
| SinI | GGWCC | 2 cut(s) | 9, 542 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 839, 894 |
| SmlI | CTYRAG | 1 cut(s) | 338 |
| SmoI | CTYRAG | 1 cut(s) | 338 |
| Sse9I | AATT | 7 cut(s) | 350, 460, 731, 755, 825, 969, 1320 |
| SsiI | CCGC | 5 cut(s) | 7, 153, 185, 597, 1345 |
| SspI | AATATT | 2 cut(s) | 712, 771 |
| SspMI | CTAG | 1 cut(s) | 428 |
| StyD4I | CCNGG | 1 cut(s) | 867 |
| StyI | CCWWGG | 3 cut(s) | 44, 90, 834 |
| TaaI | ACNGT | 4 cut(s) | 109, 542, 1024, 1066 |
| TaiI | ACGT | 2 cut(s) | 180, 998 |
| TaqI | TCGA | 7 cut(s) | 19, 104, 180, 195, 249, 466, 1036 |
| TasI | AATT | 7 cut(s) | 350, 460, 731, 755, 825, 969, 1320 |
| TauI | GCSGC | 2 cut(s) | 155, 188 |
| TfiI | GAWTC | 2 cut(s) | 740, 882 |
| Tru1I | TTAA | 2 cut(s) | 735, 749 |
| Tru9I | TTAA | 2 cut(s) | 735, 749 |
| TscAI | CASTG | 2 cut(s) | 286, 1006 |
| TseI | GCWGC | 4 cut(s) | 149, 899, 1211, 1214 |
| TspDTI | ATGAA | 5 cut(s) | 246, 753, 830, 1023, 1221 |
| TspGWI | ACGGA | 2 cut(s) | 231, 1283 |
| TspRI | CASTG | 2 cut(s) | 286, 1006 |
| VpaK11BI | GGWCC | 2 cut(s) | 9, 542 |
| XapI | RAATTY | 1 cut(s) | 731 |
| XceI | RCATGY | 1 cut(s) | 1049 |
| XmiI | GTMKAC | 1 cut(s) | 180 |
| XmnI | GAANNNNTTC | 2 cut(s) | 711, 722 |
| XspI | CTAG | 1 cut(s) | 428 |
| ZraI | GACGTC | 1 cut(s) | 178 |