Rh5BG491500

28S ribosomal protein S29

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
78254522 .. 78260606
6085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG491500.1

Sequence Viewer

Length: 1119 bp
ATGTTGCGAACGATTCTTCGAAGGGCAACAGCGACGGGCCCAAGGTCCGACGGCCCATGGAGGCTGACGGCGACGGCGAACTACTCGTCGTCCAAGGACACCAAGTCGACGGTGAAGAAGGCCAAGAAGAGTAACAAGTCTAAAGGCGAGGCCACTGCCGCCGCAGACGACGATGCCTACGCCGGCGCCGACGCCGATCTCTTCGACGATAAAGGTCGTGCTCGACGGCTTCAGGCCGACGAGAGCGATCCCTCGCTCGATGTGGGGCCCAATGGCCGACCACTCTTCACTTCTACTCCGACGCTGGCTCAGCTCACCAGCATGGACAGCTGCTCCTACTTCAAGTTCAAGACGGAGGAGTTGAACAAGGTGTTGCCGGAGGGTTTGCCGTTGGGGATGGTGAGGGAGTTCGAGGAGGCAATGCAGAGCGCCGTGCTTGTTCGCCAGAGCTTCCTTGATCTCCGGGACAATTTCCGGCGGGTTGTGGACCCGCCGTTGGGATCAGCTAGGAGCAAAGGGTCAAAAGTTAAAAGACAGATTGTTTTGGATGGCCCTGTAAGCTGTGGAAAGAGTACAGCTCTTGCGATGCTAGTTCATTGGGCTCGTGAGGAAGGTTGGTTGGTTTTGTATGTTCCCAGAGGCAAGGACTGGACTCATGGAGGTTTTTTCTATAAAAACCCACAAACAGGTCTTTGGGATACACCTGTTCAAGCTGAAAATATTCTCAAGGATTTCCTAAAATTTAATGAATCCCGTTTAAAACAATTGTTGTGCCAAATATCTGATCCTATTCCATTGGGAGAGGGAGCTGGTGTTGGATGGATGAAAGATGGAATTGATTCCATGGCAATGCCTGAAGGTTCAACACTGTATGACCTGGTTGATACAGGAATCAAGCACACTCATGCAGCTGTTGGAGTGGTAGTTCGTTTGAGGAAGGAGTTATCTCTAGTGAAAGATATCCCTGTGCTGATTGCGATTGATCAGTACAATAACTGGTTTACGTTCAGTGAGTATGAAGAGGCAGTAACTGTTCGTTCTACTCGACCAATACATGCCAAAGAACTTGCTACGGTAGGTACTCTTTTTTTGTCTCAGAGTTATGTTTTACAGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

372

Amino Acids

41.15

Weight (kDa)

8.56

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAP3 PF10236 171 - 362 3.1e-30 Mitochondrial ribosomal death-associated protein 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011212)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 185
AccI GTMKAC 1 cut(s) 107
AciI CCGC 4 cut(s) 159, 162, 478, 491
AclWI GGATC 3 cut(s) 242, 508, 779
AcoI YGGCCR 1 cut(s) 274
AcsI RAATTY 1 cut(s) 740
AcuI CTGAAG 2 cut(s) 215, 876
AcyI GRCGYC 2 cut(s) 186, 192
AfaI GTAC 3 cut(s) 574, 989, 1081
AfiI CCNNNNNNNGG 3 cut(s) 496, 497, 686
AgsI TTSAA 5 cut(s) 343, 349, 364, 710, 864
AhdI GACNNNNNGTC 1 cut(s) 103
AjnI CCWGG 1 cut(s) 876
AloI GAACNNNNNNTCC 2 cut(s) 909, 941
AluBI AGCT 9 cut(s) 313, 330, 450, 506, 561, 578, 713, 809, 911
AluI AGCT 9 cut(s) 313, 330, 450, 506, 561, 578, 713, 809, 911
Alw21I GWGCWC 1 cut(s) 223
Alw26I GTCTC 1 cut(s) 1098
AlwI GGATC 3 cut(s) 242, 508, 779
AlwNI CAGNNNCTG 1 cut(s) 1031
AoxI GGCC 8 cut(s) 37, 52, 120, 150, 234, 266, 274, 550
ApaI GGGCCC 2 cut(s) 41, 270
ApeKI GCWGC 2 cut(s) 330, 908
ApoI RAATTY 1 cut(s) 740
ArsI GACNNNNNNTTYG 2 cut(s) 71, 103
Asp700I GAANNNNTTC 2 cut(s) 720, 838
AspLEI GCGC 2 cut(s) 188, 431
AspS9I GGNCC 8 cut(s) 37, 38, 45, 53, 266, 267, 487, 551
AsuC2I CCSGG 1 cut(s) 464
AsuHPI GGTGA 3 cut(s) 124, 307, 412
AsuII TTCGAA 1 cut(s) 19
AvaII GGWCC 2 cut(s) 45, 487
BaeGI GKGCMC 2 cut(s) 41, 270
BaeI ACNNNNGTAYC 2 cut(s) 690, 723
BanI GGYRCC 1 cut(s) 185
BanII GRGCYC 3 cut(s) 41, 270, 604
BauI CACGAG 1 cut(s) 603
Bbv12I GWGCWC 1 cut(s) 223
BbvI GCAGC 2 cut(s) 317, 920
BccI CCATC 4 cut(s) 391, 542, 813, 824
BceAI ACGGC 7 cut(s) 67, 84, 90, 242, 373, 416, 478
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BciT130I CCWGG 1 cut(s) 878
BciVI GTATCC 1 cut(s) 691
BclI TGATCA 1 cut(s) 982
BcnI CCSGG 1 cut(s) 464
BcoDI GTCTC 1 cut(s) 1098
BfaI CTAG 3 cut(s) 507, 590, 950
BfoI RGCGCY 2 cut(s) 189, 432
BfuI GTATCC 1 cut(s) 691
BisI GCNGC 4 cut(s) 159, 162, 331, 909
BlpI GCTNAGC 1 cut(s) 309
BlsI GCNGC 4 cut(s) 160, 163, 332, 910
Bme1390I CCNGG 2 cut(s) 464, 878
Bme18I GGWCC 2 cut(s) 45, 487
BmeRI GACNNNNNGTC 1 cut(s) 103
BmgT120I GGNCC 8 cut(s) 37, 38, 45, 53, 266, 267, 487, 551
BmiI GGNNCC 5 cut(s) 39, 187, 267, 268, 489
BmrFI CCNGG 2 cut(s) 464, 878
BmsI GCATC 2 cut(s) 163, 576
BplI GAGNNNNNCTC 2 cut(s) 562, 594
Bpu1102I GCTNAGC 1 cut(s) 309
Bpu14I TTCGAA 1 cut(s) 19
BpuEI CTTGAG 1 cut(s) 710
BpuMI CCSGG 1 cut(s) 464
BsaHI GRCGYC 2 cut(s) 186, 192
BsaJI CCNNGG 4 cut(s) 41, 56, 93, 843
BsaXI ACNNNNNCTCC 8 cut(s) 280, 310, 317, 347, 798, 828, 909, 939
Bsc4I CCNNNNNNNGG 3 cut(s) 496, 497, 686
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 2 cut(s) 653, 1001
Bse3DI GCAATG 2 cut(s) 426, 855
BseBI CCWGG 1 cut(s) 878
BseDI CCNNGG 4 cut(s) 41, 56, 93, 843
BseGI GGATG 4 cut(s) 402, 553, 824, 828
BseLI CCNNNNNNNGG 3 cut(s) 496, 497, 686
BseMI GCAATG 2 cut(s) 426, 855
BseMII CTCAG 2 cut(s) 323, 1109
BseNI ACTGG 2 cut(s) 653, 1001
BseRI GAGGAG 2 cut(s) 371, 428
BseSI GKGCMC 2 cut(s) 41, 270
BseXI GCAGC 2 cut(s) 317, 920
BshFI GGCC 8 cut(s) 39, 54, 122, 152, 236, 268, 276, 552
BshNI GGYRCC 1 cut(s) 185
BsiHKAI GWGCWC 1 cut(s) 223
BsiSI CCGG 4 cut(s) 183, 377, 463, 475
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 3 cut(s) 496, 497, 686
BsmAI GTCTC 1 cut(s) 1098
BsmFI GGGAC 1 cut(s) 479
BsnI GGCC 8 cut(s) 39, 54, 122, 152, 236, 268, 276, 552
Bsp119I TTCGAA 1 cut(s) 19
Bsp120I GGGCCC 2 cut(s) 37, 266
Bsp1286I GDGCHC 4 cut(s) 41, 223, 270, 604
Bsp143I GATC 6 cut(s) 196, 247, 457, 500, 784, 982
Bsp1720I GCTNAGC 1 cut(s) 309
Bsp19I CCATGG 2 cut(s) 56, 843
BspACI CCGC 4 cut(s) 159, 162, 478, 491
BspANI GGCC 8 cut(s) 39, 54, 122, 152, 236, 268, 276, 552
BspCNI CTCAG 2 cut(s) 322, 1108
BspLI GGNNCC 5 cut(s) 39, 187, 267, 268, 489
BspPI GGATC 3 cut(s) 242, 508, 779
BspT104I TTCGAA 1 cut(s) 19
BspT107I GGYRCC 1 cut(s) 185
BsrDI GCAATG 2 cut(s) 426, 855
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 2 cut(s) 653, 1001
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 4 cut(s) 41, 56, 93, 843
BssMI GATC 6 cut(s) 196, 247, 457, 500, 784, 982
BssNI GRCGYC 2 cut(s) 186, 192
BssSI CACGAG 1 cut(s) 603
BssT1I CCWWGG 4 cut(s) 41, 56, 93, 843
Bst2BI CACGAG 1 cut(s) 603
Bst2UI CCWGG 1 cut(s) 878
Bst4CI ACNGT 5 cut(s) 112, 870, 1033, 1075, 1113
Bst6I CTCTTC 4 cut(s) 122, 206, 290, 1014
BstACI GRCGYC 2 cut(s) 186, 192
BstBI TTCGAA 1 cut(s) 19
BstC8I GCNNGC 2 cut(s) 184, 306
BstDEI CTNAG 2 cut(s) 309, 1095
BstDSI CCRYGG 2 cut(s) 56, 843
BstF5I GGATG 4 cut(s) 402, 553, 824, 828
BstH2I RGCGCY 2 cut(s) 189, 432
BstHHI GCGC 2 cut(s) 188, 431
BstKTI GATC 6 cut(s) 199, 250, 460, 503, 787, 985
BstMAI GTCTC 1 cut(s) 1098
BstMBI GATC 6 cut(s) 196, 247, 457, 500, 784, 982
BstMWI GCNNNNNNNGC 4 cut(s) 158, 310, 327, 558
BstNI CCWGG 1 cut(s) 878
BstNSI RCATGY 1 cut(s) 1058
BstSCI CCNGG 2 cut(s) 462, 876
BstSLI GKGCMC 2 cut(s) 41, 270
BstV1I GCAGC 2 cut(s) 317, 920
BsuI GTATCC 1 cut(s) 691
BsuRI GGCC 8 cut(s) 39, 54, 122, 152, 236, 268, 276, 552
BtgI CCRYGG 2 cut(s) 56, 843
BtgZI GCGATG 1 cut(s) 599
BtsCI GGATG 4 cut(s) 402, 553, 824, 828
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 3 cut(s) 153, 866, 1015
Cac8I GCNNGC 2 cut(s) 184, 306
CaiI CAGNNNCTG 1 cut(s) 1031
CfoI GCGC 2 cut(s) 188, 431
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 8 cut(s) 37, 38, 45, 53, 266, 267, 487, 551
CseI GACGC 2 cut(s) 200, 310
CsiI ACCWGGT 1 cut(s) 876
Csp6I GTAC 3 cut(s) 573, 988, 1080
CviAII CATG 6 cut(s) 57, 322, 656, 844, 905, 1055
CviQI GTAC 3 cut(s) 573, 988, 1080
DdeI CTNAG 2 cut(s) 309, 1095
DinI GGCGCC 1 cut(s) 187
DpnI GATC 6 cut(s) 198, 249, 459, 502, 786, 984
DpnII GATC 6 cut(s) 196, 247, 457, 500, 784, 982
DraI TTTAAA 1 cut(s) 759
DriI GACNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 1 cut(s) 274
Eam1104I CTCTTC 4 cut(s) 122, 206, 290, 1014
Eam1105I GACNNNNNGTC 1 cut(s) 103
EarI CTCTTC 4 cut(s) 122, 206, 290, 1014
Eco130I CCWWGG 4 cut(s) 41, 56, 93, 843
Eco24I GRGCYC 3 cut(s) 41, 270, 604
Eco32I GATATC 1 cut(s) 961
Eco47I GGWCC 2 cut(s) 45, 487
Eco57I CTGAAG 2 cut(s) 215, 876
EcoO109I RGGNCCY 1 cut(s) 266
EcoRII CCWGG 1 cut(s) 876
EcoRV GATATC 1 cut(s) 961
EcoT14I CCWWGG 4 cut(s) 41, 56, 93, 843
EcoT38I GRGCYC 3 cut(s) 41, 270, 604
EgeI GGCGCC 1 cut(s) 187
EheI GGCGCC 1 cut(s) 187
ErhI CCWWGG 4 cut(s) 41, 56, 93, 843
FaeI CATG 6 cut(s) 60, 325, 659, 847, 908, 1058
FaqI GGGAC 1 cut(s) 479
FatI CATG 6 cut(s) 56, 321, 655, 843, 904, 1054
FauI CCCGC 2 cut(s) 471, 498
FbaI TGATCA 1 cut(s) 982
FblI GTMKAC 1 cut(s) 107
Fnu4HI GCNGC 4 cut(s) 159, 162, 331, 909
FokI GGATG 4 cut(s) 409, 560, 831, 835
FriOI GRGCYC 3 cut(s) 41, 270, 604
Fsp4HI GCNGC 4 cut(s) 159, 162, 331, 909
FspBI CTAG 3 cut(s) 507, 590, 950
GlaI GCGC 2 cut(s) 187, 430
GluI GCNGC 4 cut(s) 159, 162, 331, 909
HaeII RGCGCY 2 cut(s) 189, 432
HaeIII GGCC 8 cut(s) 39, 54, 122, 152, 236, 268, 276, 552
HapII CCGG 4 cut(s) 183, 377, 463, 475
HgaI GACGC 2 cut(s) 200, 310
HhaI GCGC 2 cut(s) 188, 431
Hin1I GRCGYC 2 cut(s) 186, 192
Hin1II CATG 6 cut(s) 60, 325, 659, 847, 908, 1058
Hin6I GCGC 2 cut(s) 186, 429
HinP1I GCGC 2 cut(s) 186, 429
HincII GTYRAC 1 cut(s) 108
HindII GTYRAC 1 cut(s) 108
HinfI GANTC 5 cut(s) 13, 652, 749, 839, 891
HpaII CCGG 4 cut(s) 183, 377, 463, 475
HphI GGTGA 3 cut(s) 124, 307, 412
Hpy166II GTNNAC 3 cut(s) 108, 487, 1002
Hpy188I TCNGA 4 cut(s) 49, 300, 784, 1098
Hpy188III TCNNGA 2 cut(s) 349, 605
Hpy8I GTNNAC 3 cut(s) 108, 487, 1002
HpyAV CCTTC 5 cut(s) 15, 112, 605, 851, 931
HpyCH4III ACNGT 5 cut(s) 112, 870, 1033, 1075, 1113
HpyCH4IV ACGT 1 cut(s) 1004
HpyCH4V TGCA 2 cut(s) 424, 908
HpyF10VI GCNNNNNNNGC 4 cut(s) 158, 310, 327, 558
HpyF3I CTNAG 2 cut(s) 309, 1095
HpySE526I ACGT 1 cut(s) 1004
Hsp92I GRCGYC 2 cut(s) 186, 192
Hsp92II CATG 6 cut(s) 60, 325, 659, 847, 908, 1058
HspAI GCGC 2 cut(s) 186, 429
KasI GGCGCC 1 cut(s) 185
KroI GCCGGC 1 cut(s) 182
KroNI GCCGGC 1 cut(s) 184
Ksp22I TGATCA 1 cut(s) 982
Kzo9I GATC 6 cut(s) 196, 247, 457, 500, 784, 982
LmnI GCTCC 3 cut(s) 338, 510, 806
Lsp1109I GCAGC 2 cut(s) 317, 920
LweI GCATC 2 cut(s) 163, 576
MabI ACCWGGT 1 cut(s) 876
MaeI CTAG 3 cut(s) 507, 590, 950
MaeII ACGT 1 cut(s) 1004
MaeIII GTNAC 2 cut(s) 131, 1027
MalI GATC 6 cut(s) 198, 249, 459, 502, 786, 984
MboI GATC 6 cut(s) 196, 247, 457, 500, 784, 982
MboII GAAGA 6 cut(s) 8, 127, 139, 193, 277, 1031
MfeI CAATTG 1 cut(s) 764
MhlI GDGCHC 4 cut(s) 41, 223, 270, 604
MluCI AATT 4 cut(s) 469, 740, 764, 834
Mly113I GGCGCC 1 cut(s) 186
MlyI GAGTC 1 cut(s) 646
MmeI TCCRAC 4 cut(s) 72, 323, 796, 895
MreI CGCCGGCG 1 cut(s) 182
MroNI GCCGGC 1 cut(s) 182
MroXI GAANNNNTTC 2 cut(s) 720, 838
MseI TTAA 3 cut(s) 528, 744, 758
MslI CAYNNNNRTG 3 cut(s) 320, 848, 903
MspA1I CMGCKG 2 cut(s) 330, 911
MspI CCGG 4 cut(s) 183, 377, 463, 475
MspR9I CCNGG 2 cut(s) 464, 878
MunI CAATTG 1 cut(s) 764
MvaI CCWGG 1 cut(s) 878
MwoI GCNNNNNNNGC 4 cut(s) 158, 310, 327, 558
NaeI GCCGGC 1 cut(s) 184
NarI GGCGCC 1 cut(s) 186
NciI CCSGG 1 cut(s) 464
NcoI CCATGG 2 cut(s) 56, 843
NdeII GATC 6 cut(s) 196, 247, 457, 500, 784, 982
NgoMIV GCCGGC 1 cut(s) 182
NlaIII CATG 6 cut(s) 60, 325, 659, 847, 908, 1058
NlaIV GGNNCC 5 cut(s) 39, 187, 267, 268, 489
NspI RCATGY 1 cut(s) 1058
NspV TTCGAA 1 cut(s) 19
PcsI WCGNNNNNNNCGW 3 cut(s) 74, 186, 1042
PdiI GCCGGC 1 cut(s) 184
PdmI GAANNNNTTC 2 cut(s) 720, 838
PfeI GAWTC 4 cut(s) 13, 749, 839, 891
PfoI TCCNGGA 1 cut(s) 462
PkrI GCNGC 4 cut(s) 160, 163, 332, 910
PleI GAGTC 1 cut(s) 646
PluTI GGCGCC 1 cut(s) 189
PpsI GAGTC 1 cut(s) 646
Psp6I CCWGG 1 cut(s) 876
PspGI CCWGG 1 cut(s) 876
PspN4I GGNNCC 5 cut(s) 39, 187, 267, 268, 489
PspOMI GGGCCC 2 cut(s) 37, 266
PspPI GGNCC 8 cut(s) 37, 38, 45, 53, 266, 267, 487, 551
PstNI CAGNNNCTG 1 cut(s) 1031
PvuII CAGCTG 2 cut(s) 330, 911
RsaI GTAC 3 cut(s) 574, 989, 1081
RsaNI GTAC 3 cut(s) 573, 988, 1080
RseI CAYNNNNRTG 3 cut(s) 320, 848, 903
SalI GTCGAC 1 cut(s) 106
SaqAI TTAA 3 cut(s) 528, 744, 758
SatI GCNGC 4 cut(s) 159, 162, 331, 909
Sau3AI GATC 6 cut(s) 196, 247, 457, 500, 784, 982
Sau96I GGNCC 8 cut(s) 37, 38, 45, 53, 266, 267, 487, 551
SchI GAGTC 1 cut(s) 646
ScrFI CCNGG 2 cut(s) 464, 878
SduI GDGCHC 4 cut(s) 41, 223, 270, 604
SexAI ACCWGGT 1 cut(s) 876
SfaNI GCATC 2 cut(s) 163, 576
SfoI GGCGCC 1 cut(s) 187
SfuI TTCGAA 1 cut(s) 19
SgrAI CRCCGGYG 1 cut(s) 182
SinI GGWCC 2 cut(s) 45, 487
SmiMI CAYNNNNRTG 3 cut(s) 320, 848, 903
SmlI CTYRAG 1 cut(s) 725
SmoI CTYRAG 1 cut(s) 725
Sse9I AATT 4 cut(s) 469, 740, 764, 834
SsiI CCGC 4 cut(s) 159, 162, 478, 491
SspDI GGCGCC 1 cut(s) 185
SspI AATATT 1 cut(s) 721
SspMI CTAG 3 cut(s) 507, 590, 950
StyD4I CCNGG 2 cut(s) 462, 876
StyI CCWWGG 4 cut(s) 41, 56, 93, 843
TaaI ACNGT 5 cut(s) 112, 870, 1033, 1075, 1113
TaiI ACGT 1 cut(s) 1007
TaqI TCGA 7 cut(s) 19, 107, 204, 223, 258, 411, 1045
TasI AATT 4 cut(s) 469, 740, 764, 834
TatI WGTACW 2 cut(s) 572, 987
TauI GCSGC 2 cut(s) 161, 164
TfiI GAWTC 4 cut(s) 13, 749, 839, 891
Tru1I TTAA 3 cut(s) 528, 744, 758
Tru9I TTAA 3 cut(s) 528, 744, 758
TscAI CASTG 3 cut(s) 160, 873, 1015
TseI GCWGC 2 cut(s) 330, 908
TspDTI ATGAA 4 cut(s) 584, 762, 839, 1032
TspGWI ACGGA 1 cut(s) 368
TspRI CASTG 3 cut(s) 160, 873, 1015
VpaK11BI GGWCC 2 cut(s) 45, 487
XapI RAATTY 1 cut(s) 740
XceI RCATGY 1 cut(s) 1058
XmiI GTMKAC 1 cut(s) 107
XmnI GAANNNNTTC 2 cut(s) 720, 838
XspI CTAG 3 cut(s) 507, 590, 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.