JOSEPHIN-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07300 AT1G07300 AT1G07300 |
| fragaria_vesca | FvH4_3g38251 |
| prunus_persica | Prupe.6G060400_v2.0.a1 |
| pyrus_communis | pycom03g05970 |
| rosa_laevigata | RLG00000036007 |
| rosa_multiflora | Rmu_sc0000376.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00012080 |
| rosa_rugosa | Rorug05G0392700 |
| rosa_samantha | Rh5AG450300 Rh5BG468700 Rh5CG490900 Rh5DG482200 |
| rosa_wichuraiana | Rw0G009880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 280 |
| AccI | GTMKAC | 1 cut(s) | 110 |
| AccII | CGCG | 1 cut(s) | 241 |
| AcsI | RAATTY | 1 cut(s) | 118 |
| AcyI | GRCGYC | 1 cut(s) | 281 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 225 |
| AgsI | TTSAA | 3 cut(s) | 70, 81, 354 |
| Alw26I | GTCTC | 1 cut(s) | 226 |
| ApoI | RAATTY | 1 cut(s) | 118 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 220, 252 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 247 |
| AspLEI | GCGC | 1 cut(s) | 283 |
| BanI | GGYRCC | 1 cut(s) | 280 |
| BcoDI | GTCTC | 1 cut(s) | 226 |
| BfaI | CTAG | 2 cut(s) | 84, 258 |
| BfmI | CTRYAG | 1 cut(s) | 366 |
| BfoI | RGCGCY | 1 cut(s) | 284 |
| BmiI | GGNNCC | 1 cut(s) | 282 |
| BsaHI | GRCGYC | 1 cut(s) | 281 |
| BsaI | GGTCTC | 1 cut(s) | 226 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 225 |
| Bsh1236I | CGCG | 1 cut(s) | 241 |
| BshNI | GGYRCC | 1 cut(s) | 280 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 225 |
| BsmAI | GTCTC | 1 cut(s) | 226 |
| Bso31I | GGTCTC | 1 cut(s) | 226 |
| Bsp143I | GATC | 2 cut(s) | 263, 356 |
| Bsp68I | TCGCGA | 1 cut(s) | 241 |
| BspFNI | CGCG | 1 cut(s) | 241 |
| BspLI | GGNNCC | 1 cut(s) | 282 |
| BspT107I | GGYRCC | 1 cut(s) | 280 |
| BspTNI | GGTCTC | 1 cut(s) | 226 |
| BssMI | GATC | 2 cut(s) | 263, 356 |
| BssNAI | GTATAC | 1 cut(s) | 111 |
| BssNI | GRCGYC | 1 cut(s) | 281 |
| Bst1107I | GTATAC | 1 cut(s) | 111 |
| Bst6I | CTCTTC | 2 cut(s) | 47, 343 |
| BstACI | GRCGYC | 1 cut(s) | 281 |
| BstDEI | CTNAG | 1 cut(s) | 384 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 223 |
| BstFNI | CGCG | 1 cut(s) | 241 |
| BstH2I | RGCGCY | 1 cut(s) | 284 |
| BstHHI | GCGC | 1 cut(s) | 283 |
| BstKTI | GATC | 2 cut(s) | 266, 359 |
| BstMAI | GTCTC | 1 cut(s) | 226 |
| BstMBI | GATC | 2 cut(s) | 263, 356 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstSFI | CTRYAG | 1 cut(s) | 366 |
| BstUI | CGCG | 1 cut(s) | 241 |
| BstZ17I | GTATAC | 1 cut(s) | 111 |
| BtuMI | TCGCGA | 1 cut(s) | 241 |
| CfoI | GCGC | 1 cut(s) | 283 |
| CviAII | CATG | 2 cut(s) | 141, 223 |
| CviJI | RGCY | 4 cut(s) | 14, 30, 308, 371 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 30, 308, 371 |
| DdeI | CTNAG | 1 cut(s) | 384 |
| DinI | GGCGCC | 1 cut(s) | 282 |
| DpnI | GATC | 2 cut(s) | 265, 358 |
| DpnII | GATC | 2 cut(s) | 263, 356 |
| Eam1104I | CTCTTC | 2 cut(s) | 47, 343 |
| EarI | CTCTTC | 2 cut(s) | 47, 343 |
| Eco31I | GGTCTC | 1 cut(s) | 226 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 223 |
| EgeI | GGCGCC | 1 cut(s) | 282 |
| EheI | GGCGCC | 1 cut(s) | 282 |
| FaeI | CATG | 2 cut(s) | 144, 226 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 44, 76, 346, 378 |
| FatI | CATG | 2 cut(s) | 140, 222 |
| FblI | GTMKAC | 1 cut(s) | 110 |
| FspBI | CTAG | 2 cut(s) | 84, 258 |
| GlaI | GCGC | 1 cut(s) | 282 |
| HaeII | RGCGCY | 1 cut(s) | 284 |
| HhaI | GCGC | 1 cut(s) | 283 |
| Hin1I | GRCGYC | 1 cut(s) | 281 |
| Hin1II | CATG | 2 cut(s) | 144, 226 |
| Hin6I | GCGC | 1 cut(s) | 281 |
| HinP1I | GCGC | 1 cut(s) | 281 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HinfI | GANTC | 4 cut(s) | 57, 150, 248, 290 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 111 |
| Hpy188III | TCNNGA | 4 cut(s) | 147, 240, 258, 354 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 111 |
| HpyAV | CCTTC | 3 cut(s) | 28, 99, 246 |
| HpyCH4V | TGCA | 1 cut(s) | 321 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| HpyF3I | CTNAG | 1 cut(s) | 384 |
| Hsp92I | GRCGYC | 1 cut(s) | 281 |
| Hsp92II | CATG | 2 cut(s) | 144, 226 |
| HspAI | GCGC | 1 cut(s) | 281 |
| KasI | GGCGCC | 1 cut(s) | 280 |
| Kzo9I | GATC | 2 cut(s) | 263, 356 |
| LmnI | GCTCC | 1 cut(s) | 87 |
| LpnPI | CCDG | 6 cut(s) | 34, 35, 44, 132, 180, 297 |
| MaeI | CTAG | 2 cut(s) | 84, 258 |
| MalI | GATC | 2 cut(s) | 265, 358 |
| MboI | GATC | 2 cut(s) | 263, 356 |
| MboII | GAAGA | 6 cut(s) | 64, 273, 326, 330, 333, 336 |
| MluCI | AATT | 1 cut(s) | 118 |
| Mly113I | GGCGCC | 1 cut(s) | 281 |
| MlyI | GAGTC | 1 cut(s) | 66 |
| MnlI | CCTC | 2 cut(s) | 219, 229 |
| MroXI | GAANNNNTTC | 1 cut(s) | 247 |
| MvnI | CGCG | 1 cut(s) | 241 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NarI | GGCGCC | 1 cut(s) | 281 |
| NdeII | GATC | 2 cut(s) | 263, 356 |
| NlaIII | CATG | 2 cut(s) | 144, 226 |
| NlaIV | GGNNCC | 1 cut(s) | 282 |
| NruI | TCGCGA | 1 cut(s) | 241 |
| PdmI | GAANNNNTTC | 1 cut(s) | 247 |
| PfeI | GAWTC | 3 cut(s) | 150, 248, 290 |
| PleI | GAGTC | 1 cut(s) | 65 |
| PluTI | GGCGCC | 1 cut(s) | 284 |
| PpsI | GAGTC | 1 cut(s) | 65 |
| PspN4I | GGNNCC | 1 cut(s) | 282 |
| RruI | TCGCGA | 1 cut(s) | 241 |
| Sau3AI | GATC | 2 cut(s) | 263, 356 |
| SchI | GAGTC | 1 cut(s) | 66 |
| SetI | ASST | 5 cut(s) | 110, 134, 192, 221, 238 |
| SfcI | CTRYAG | 1 cut(s) | 366 |
| SfoI | GGCGCC | 1 cut(s) | 282 |
| Sse9I | AATT | 1 cut(s) | 118 |
| SspDI | GGCGCC | 1 cut(s) | 280 |
| SspMI | CTAG | 2 cut(s) | 84, 258 |
| TasI | AATT | 1 cut(s) | 118 |
| TfiI | GAWTC | 3 cut(s) | 150, 248, 290 |
| TspDTI | ATGAA | 1 cut(s) | 319 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 223 |
| XapI | RAATTY | 1 cut(s) | 118 |
| XbaI | TCTAGA | 1 cut(s) | 257 |
| XmiI | GTMKAC | 1 cut(s) | 110 |
| XmnI | GAANNNNTTC | 1 cut(s) | 247 |
| XspI | CTAG | 2 cut(s) | 84, 258 |