JOSEPHIN-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07300 AT1G07300 AT1G07300 |
| fragaria_vesca | FvH4_3g38251 |
| prunus_persica | Prupe.6G060400_v2.0.a1 |
| pyrus_communis | pycom03g05970 |
| rosa_laevigata | RLG00000036007 |
| rosa_multiflora | Rmu_sc0000376.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00012080 |
| rosa_rugosa | Rorug05G0392700 |
| rosa_samantha | Rh5AG450300 Rh5BG468700 Rh5CG490900 Rh5DG482200 |
| rosa_wichuraiana | Rw0G009880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 114 |
| AciI | CCGC | 1 cut(s) | 191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 222 |
| AgsI | TTSAA | 3 cut(s) | 127, 351, 390 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AluBI | AGCT | 2 cut(s) | 130, 381 |
| AluI | AGCT | 2 cut(s) | 130, 381 |
| AoxI | GGCC | 2 cut(s) | 213, 303 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 244 |
| AsuC2I | CCSGG | 1 cut(s) | 282 |
| AsuHPI | GGTGA | 2 cut(s) | 37, 296 |
| BbsI | GAAGAC | 1 cut(s) | 59 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BcnI | CCSGG | 1 cut(s) | 282 |
| Bme1390I | CCNGG | 2 cut(s) | 23, 282 |
| BmrFI | CCNGG | 2 cut(s) | 23, 282 |
| BpiI | GAAGAC | 1 cut(s) | 59 |
| BpuMI | CCSGG | 1 cut(s) | 282 |
| BsaAI | YACGTR | 1 cut(s) | 274 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 222 |
| Bse1I | ACTGG | 1 cut(s) | 81 |
| Bse3DI | GCAATG | 1 cut(s) | 407 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseGI | GGATG | 1 cut(s) | 251 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 222 |
| BseMI | GCAATG | 1 cut(s) | 407 |
| BseMII | CTCAG | 1 cut(s) | 181 |
| BseNI | ACTGG | 1 cut(s) | 81 |
| BshFI | GGCC | 2 cut(s) | 215, 305 |
| BsiSI | CCGG | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 222 |
| BsnI | GGCC | 2 cut(s) | 215, 305 |
| Bsp143I | GATC | 1 cut(s) | 260 |
| BspACI | CCGC | 1 cut(s) | 191 |
| BspANI | GGCC | 2 cut(s) | 215, 305 |
| BspCNI | CTCAG | 1 cut(s) | 180 |
| BsrDI | GCAATG | 1 cut(s) | 407 |
| BsrI | ACTGG | 1 cut(s) | 81 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| BssMI | GATC | 1 cut(s) | 260 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 1 cut(s) | 58 |
| Bst6I | CTCTTC | 2 cut(s) | 294, 340 |
| BstBAI | YACGTR | 1 cut(s) | 274 |
| BstDEI | CTNAG | 1 cut(s) | 167 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 220 |
| BstF5I | GGATG | 1 cut(s) | 251 |
| BstKTI | GATC | 1 cut(s) | 263 |
| BstMBI | GATC | 1 cut(s) | 260 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 2 cut(s) | 21, 280 |
| BstV2I | GAAGAC | 1 cut(s) | 59 |
| BsuRI | GGCC | 2 cut(s) | 215, 305 |
| BtsCI | GGATG | 1 cut(s) | 251 |
| CseI | GACGC | 1 cut(s) | 357 |
| CviAII | CATG | 1 cut(s) | 459 |
| CviJI | RGCY | 5 cut(s) | 14, 130, 215, 305, 381 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 130, 215, 305, 381 |
| DdeI | CTNAG | 1 cut(s) | 167 |
| DpnI | GATC | 1 cut(s) | 262 |
| DpnII | GATC | 1 cut(s) | 260 |
| Eam1104I | CTCTTC | 2 cut(s) | 294, 340 |
| EarI | CTCTTC | 2 cut(s) | 294, 340 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 220 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 462 |
| FaiI | YATR | 9 cut(s) | 42, 158, 202, 212, 271, 294, 308, 438, 460 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 370, 402 |
| FatI | CATG | 1 cut(s) | 458 |
| FauI | CCCGC | 1 cut(s) | 184 |
| FblI | GTMKAC | 1 cut(s) | 114 |
| FokI | GGATG | 1 cut(s) | 238 |
| HaeIII | GGCC | 2 cut(s) | 215, 305 |
| HapII | CCGG | 1 cut(s) | 281 |
| HgaI | GACGC | 1 cut(s) | 357 |
| Hin1II | CATG | 1 cut(s) | 462 |
| HindIII | AAGCTT | 1 cut(s) | 128 |
| HinfI | GANTC | 4 cut(s) | 147, 245, 277, 287 |
| HpaII | CCGG | 1 cut(s) | 281 |
| HphI | GGTGA | 2 cut(s) | 37, 296 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 115 |
| Hpy188I | TCNGA | 1 cut(s) | 170 |
| Hpy188III | TCNNGA | 4 cut(s) | 69, 144, 237, 255 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 115 |
| HpyAV | CCTTC | 1 cut(s) | 243 |
| HpyCH4III | ACNGT | 1 cut(s) | 58 |
| HpyCH4IV | ACGT | 2 cut(s) | 273, 398 |
| HpyCH4V | TGCA | 1 cut(s) | 318 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| HpyF3I | CTNAG | 1 cut(s) | 167 |
| HpySE526I | ACGT | 2 cut(s) | 273, 398 |
| Hsp92II | CATG | 1 cut(s) | 462 |
| Kzo9I | GATC | 1 cut(s) | 260 |
| LpnPI | CCDG | 6 cut(s) | 8, 35, 82, 94, 268, 294 |
| MaeII | ACGT | 2 cut(s) | 273, 398 |
| MaeIII | GTNAC | 6 cut(s) | 83, 91, 162, 274, 369, 454 |
| MalI | GATC | 1 cut(s) | 262 |
| MboI | GATC | 1 cut(s) | 260 |
| MboII | GAAGA | 8 cut(s) | 64, 240, 270, 311, 323, 327, 330, 378 |
| MlyI | GAGTC | 1 cut(s) | 271 |
| MnlI | CCTC | 5 cut(s) | 71, 153, 216, 226, 295 |
| MroXI | GAANNNNTTC | 1 cut(s) | 244 |
| MspI | CCGG | 1 cut(s) | 281 |
| MspR9I | CCNGG | 2 cut(s) | 23, 282 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NciI | CCSGG | 1 cut(s) | 282 |
| NdeII | GATC | 1 cut(s) | 260 |
| NlaIII | CATG | 1 cut(s) | 462 |
| NmuCI | GTSAC | 3 cut(s) | 274, 369, 454 |
| PdmI | GAANNNNTTC | 1 cut(s) | 244 |
| PfeI | GAWTC | 3 cut(s) | 147, 245, 287 |
| PleI | GAGTC | 1 cut(s) | 271 |
| PpsI | GAGTC | 1 cut(s) | 271 |
| Ppu21I | YACGTR | 1 cut(s) | 274 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| Sau3AI | GATC | 1 cut(s) | 260 |
| SchI | GAGTC | 1 cut(s) | 271 |
| ScrFI | CCNGG | 2 cut(s) | 23, 282 |
| SsiI | CCGC | 1 cut(s) | 191 |
| StyD4I | CCNGG | 2 cut(s) | 21, 280 |
| TaaI | ACNGT | 1 cut(s) | 58 |
| TaiI | ACGT | 2 cut(s) | 276, 401 |
| TfiI | GAWTC | 3 cut(s) | 147, 245, 287 |
| TseFI | GTSAC | 3 cut(s) | 274, 369, 454 |
| Tsp45I | GTSAC | 3 cut(s) | 274, 369, 454 |
| TspDTI | ATGAA | 2 cut(s) | 240, 316 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 220 |
| XmiI | GTMKAC | 1 cut(s) | 114 |
| XmnI | GAANNNNTTC | 1 cut(s) | 244 |