No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07500 |
| fragaria_vesca | FvH4_3g36811 |
| malus_domestica | MD03G1088000.v1.1 MD11G1097200.v1.1 |
| prunus_persica | Prupe.6G072300_v2.0.a1 |
| pyrus_communis | pycom03g06950 pycom11g08190 |
| rosa_rugosa | Rorug05G0375400 |
| rosa_samantha | Rh5BG449600 Rh5CG472200 Rh5DG463200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 94 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 223 |
| AciI | CCGC | 5 cut(s) | 98, 105, 131, 146, 152 |
| AcyI | GRCGYC | 1 cut(s) | 95 |
| AfaI | GTAC | 1 cut(s) | 55 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 161, 223 |
| AgsI | TTSAA | 1 cut(s) | 172 |
| AluBI | AGCT | 3 cut(s) | 184, 190, 221 |
| AluI | AGCT | 3 cut(s) | 184, 190, 221 |
| ApeKI | GCWGC | 2 cut(s) | 66, 148 |
| AspLEI | GCGC | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 71, 104 |
| BanI | GGYRCC | 1 cut(s) | 94 |
| BbvI | GCAGC | 2 cut(s) | 53, 160 |
| BccI | CCATC | 2 cut(s) | 16, 38 |
| BciVI | GTATCC | 1 cut(s) | 72 |
| BfoI | RGCGCY | 1 cut(s) | 98 |
| BfuI | GTATCC | 1 cut(s) | 72 |
| BisI | GCNGC | 5 cut(s) | 67, 98, 146, 149, 152 |
| BlsI | GCNGC | 5 cut(s) | 68, 99, 147, 150, 153 |
| BmiI | GGNNCC | 1 cut(s) | 96 |
| Bpu10I | CCTNAGC | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 206 |
| BsaHI | GRCGYC | 1 cut(s) | 95 |
| BsaWI | WCCGGW | 1 cut(s) | 82 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 161, 223 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 161, 223 |
| BseMII | CTCAG | 1 cut(s) | 171 |
| BseXI | GCAGC | 2 cut(s) | 53, 160 |
| BshNI | GGYRCC | 1 cut(s) | 94 |
| BsiSI | CCGG | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 161, 223 |
| BspACI | CCGC | 5 cut(s) | 98, 105, 131, 146, 152 |
| BspCNI | CTCAG | 1 cut(s) | 172 |
| BspLI | GGNNCC | 1 cut(s) | 96 |
| BspT107I | GGYRCC | 1 cut(s) | 94 |
| BssNI | GRCGYC | 1 cut(s) | 95 |
| BstACI | GRCGYC | 1 cut(s) | 95 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstH2I | RGCGCY | 1 cut(s) | 98 |
| BstHHI | GCGC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 128, 151 |
| BstV1I | GCAGC | 2 cut(s) | 53, 160 |
| BsuI | GTATCC | 1 cut(s) | 72 |
| CfoI | GCGC | 1 cut(s) | 97 |
| Csp6I | GTAC | 1 cut(s) | 54 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 5 cut(s) | 145, 151, 184, 190, 221 |
| CviKI_1 | RGCY | 5 cut(s) | 145, 151, 184, 190, 221 |
| CviQI | GTAC | 1 cut(s) | 54 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| DinI | GGCGCC | 1 cut(s) | 96 |
| EgeI | GGCGCC | 1 cut(s) | 96 |
| EheI | GGCGCC | 1 cut(s) | 96 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 1 cut(s) | 14 |
| FatI | CATG | 1 cut(s) | 12 |
| FauI | CCCGC | 2 cut(s) | 112, 124 |
| Fnu4HI | GCNGC | 5 cut(s) | 67, 98, 146, 149, 152 |
| Fsp4HI | GCNGC | 5 cut(s) | 67, 98, 146, 149, 152 |
| GlaI | GCGC | 1 cut(s) | 96 |
| GluI | GCNGC | 5 cut(s) | 67, 98, 146, 149, 152 |
| HaeII | RGCGCY | 1 cut(s) | 98 |
| HapII | CCGG | 1 cut(s) | 83 |
| HhaI | GCGC | 1 cut(s) | 97 |
| Hin1I | GRCGYC | 1 cut(s) | 95 |
| Hin1II | CATG | 1 cut(s) | 16 |
| Hin6I | GCGC | 1 cut(s) | 95 |
| HinP1I | GCGC | 1 cut(s) | 95 |
| HindIII | AAGCTT | 1 cut(s) | 219 |
| HinfI | GANTC | 1 cut(s) | 86 |
| HpaII | CCGG | 1 cut(s) | 83 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 78 |
| Hpy188III | TCNNGA | 1 cut(s) | 179 |
| HpyAV | CCTTC | 1 cut(s) | 112 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 128, 151 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| Hsp92I | GRCGYC | 1 cut(s) | 95 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| HspAI | GCGC | 1 cut(s) | 95 |
| KasI | GGCGCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 2 cut(s) | 96, 192 |
| Lsp1109I | GCAGC | 2 cut(s) | 53, 160 |
| MaeIII | GTNAC | 1 cut(s) | 202 |
| MboII | GAAGA | 4 cut(s) | 47, 148, 151, 169 |
| Mly113I | GGCGCC | 1 cut(s) | 95 |
| MlyI | GAGTC | 1 cut(s) | 95 |
| MnlI | CCTC | 2 cut(s) | 111, 186 |
| MseI | TTAA | 2 cut(s) | 30, 229 |
| MslI | CAYNNNNRTG | 1 cut(s) | 17 |
| MspI | CCGG | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 128, 151 |
| NarI | GGCGCC | 1 cut(s) | 95 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NlaIV | GGNNCC | 1 cut(s) | 96 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 223 |
| PkrI | GCNGC | 5 cut(s) | 68, 99, 147, 150, 153 |
| PleI | GAGTC | 1 cut(s) | 94 |
| PluTI | GGCGCC | 1 cut(s) | 98 |
| PpsI | GAGTC | 1 cut(s) | 94 |
| PspN4I | GGNNCC | 1 cut(s) | 96 |
| RsaI | GTAC | 1 cut(s) | 55 |
| RsaNI | GTAC | 1 cut(s) | 54 |
| RseI | CAYNNNNRTG | 1 cut(s) | 17 |
| SaqAI | TTAA | 2 cut(s) | 30, 229 |
| SatI | GCNGC | 5 cut(s) | 67, 98, 146, 149, 152 |
| SchI | GAGTC | 1 cut(s) | 95 |
| SetI | ASST | 3 cut(s) | 186, 192, 223 |
| SfoI | GGCGCC | 1 cut(s) | 96 |
| SgeI | CNNG | 9 cut(s) | 25, 82, 95, 116, 144, 175, 191, 197, 225 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 17 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| SsiI | CCGC | 5 cut(s) | 98, 105, 131, 146, 152 |
| SspDI | GGCGCC | 1 cut(s) | 94 |
| TauI | GCSGC | 3 cut(s) | 100, 148, 154 |
| Tru1I | TTAA | 2 cut(s) | 30, 229 |
| Tru9I | TTAA | 2 cut(s) | 30, 229 |
| TseI | GCWGC | 2 cut(s) | 66, 148 |
| TspDTI | ATGAA | 1 cut(s) | 23 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 223 |