Prupe.6G072500_v2.0.a1

Isoprenylcysteine carboxyl methyltransferase (ICMT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014320
Physical Location & Seq
Reverse (-)
4949562 .. 4951202
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G072500.1

Sequence Viewer

Length: 1173 bp
ATGGAAGCCAAGTCAATGTTCCTACATTCCAAAACGATCCCATTCTGTTCTGCTTTCACTGATAGACCCAACTTCTCTCTCAGACCTTTTCGTAAACACCTACAGGGCAATTCAATAAACCACAGCTCTCACTTACACCATAGCCTTAAACCCCTCAAGAACCCATCAAATTTATGTCTTTCACAAAACCCATTCTCATCATCACCAACAAGAACAAGAAGAAGCACCCATTTGTTACCTCCGCTCAAATGCTCATACTCCAGGACCTCAAGCTCAGAATCTCAAACCCCATTGCTAAAACTCCTCAAAAATATATCCTTTGATTCATTCAAAGCTACCCTTTTTAAATTAACCCCTTTTGATGTCATCAAGTGGTCTGGAATCTTTTCCATTGCAATTGCAGCCACAAAAGGGACTGTCAATTTGCTCTTGAGCCCCTTTTTCTGGATGTACTTTAGCTGGACTTGGATGTTTTGGCCTTGGTTTCTGGCTCTATCAATCGGGGTTTACGGGTTATACTGCTTTCGGAAGCATTTACAAGGTGAAGCCAGCATCTTTGAGCAACTTGCCATTGTCACTTCAGTGTTTTCTTGGCTCACACTAGTCCCACCTGCCCATTTCAATGGCTTCCTTGAAGGTTGGCCTTATGTGTTCTTCTTTGTCTACCATTACTTCTTTTTCTTCAATGTTAGCGTGAGGAAACGGTTATATGGAGATTACTATGCTCGCCCGCATGACCCCAAGTGGGATGTGAGCCCACCAAAGTGGTTGCGCCTTTTGTTCTGTGCCGGGGTCATGGCTGGTCACTGGCTGGCTGCATTTGAAGGGCCAGAGCTTCACCGCATTCCTGGCGGGTGGAGCAATGTAGGTATTTGGATTTTGATATTGGTGACTCTGCTAGTGCAATATAACTCAACATTGTATCTTGCAAAGTATTCAGAAAAGGTGGTGGTGCCAACTGCTGTTGTACAGTTTGGGCCTTACCGGTGGGTACGCCATCCAATATATTCATCTACGATGCTTCTGTTCGCCACATATTTCATTGCGCTTCGAGCACCTTTGAGCTTGCTATTCATCGTAGCAGTTTGTTCGTTGTACTATGATCAGAAGGCAAAACTGGAGGAGGCTTTGATGGTTGAGACTTTTGGGGAGAGGGATGAACCCAAGACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PEMT

Protein Analysis

391

Amino Acids

45.1

Weight (kDa)

9.6

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014320)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G59500 AT5G59500
fragaria_vesca FvH4_3g36800 FvH4_3g36800
malus_domestica MD03G1088200.v1.1
prunus_persica Prupe.6G072500_v2.0.a1
pyrus_communis pycom03g06970
rosa_chinensis RchiOBHm_Chr5g0065861
rosa_laevigata RLG00000035822
rosa_multiflora Rmu_co8472781.1_g000001
rosa_roxburghii Rroxscaffold_1G00015300
rosa_rugosa Rorug05G0374600
rosa_samantha Rh5AG433100 Rh5BG449300 Rh5CG471600 Rh5DG462900
rosa_wichuraiana Rw5G040610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 619
Acc36I ACCTGC 1 cut(s) 619
AccB1I GGYRCC 1 cut(s) 952
AccBSI CCGCTC 1 cut(s) 244
AccI GTMKAC 1 cut(s) 663
AciI CCGC 4 cut(s) 242, 731, 841, 852
AclWI GGATC 1 cut(s) 31
AcsI RAATTY 1 cut(s) 169
AcuI CTGAAG 1 cut(s) 564
AfaI GTAC 4 cut(s) 452, 969, 993, 1097
AfiI CCNNNNNNNGG 3 cut(s) 411, 444, 745
AgeI ACCGGT 1 cut(s) 984
AgsI TTSAA 6 cut(s) 114, 331, 622, 635, 685, 824
AhlI ACTAGT 1 cut(s) 601
AjnI CCWGG 2 cut(s) 260, 847
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AleI CACNNNNGTG 2 cut(s) 581, 763
AluBI AGCT 6 cut(s) 126, 273, 335, 459, 835, 1065
AluI AGCT 6 cut(s) 126, 273, 335, 459, 835, 1065
Alw21I GWGCWC 1 cut(s) 1057
Alw26I GTCTC 1 cut(s) 1133
AlwI GGATC 1 cut(s) 31
AoxI GGCC 4 cut(s) 476, 641, 827, 977
ApeKI GCWGC 2 cut(s) 401, 815
ApoI RAATTY 1 cut(s) 169
ArsI GACNNNNNNTTYG 2 cut(s) 406, 438
AsiGI ACCGGT 1 cut(s) 984
Asp700I GAANNNNTTC 1 cut(s) 385
AspLEI GCGC 2 cut(s) 774, 1048
AspS9I GGNCC 3 cut(s) 264, 827, 977
AsuC2I CCSGG 1 cut(s) 790
AsuHPI GGTGA 4 cut(s) 195, 554, 830, 901
AvaII GGWCC 1 cut(s) 264
BanI GGYRCC 1 cut(s) 952
BanII GRGCYC 2 cut(s) 437, 758
Bbv12I GWGCWC 1 cut(s) 1057
BbvI GCAGC 2 cut(s) 413, 802
BccI CCATC 3 cut(s) 172, 1005, 1126
BcgI CGANNNNNNTGC 2 cut(s) 1071, 1105
BciT130I CCWGG 2 cut(s) 262, 849
BclI TGATCA 1 cut(s) 1102
BcnI CCSGG 1 cut(s) 790
BcoDI GTCTC 1 cut(s) 1133
BcuI ACTAGT 1 cut(s) 601
BfaI CTAG 2 cut(s) 602, 899
BfmI CTRYAG 1 cut(s) 101
BfuAI ACCTGC 1 cut(s) 619
BisI GCNGC 2 cut(s) 402, 816
BlsI GCNGC 2 cut(s) 403, 817
Bme1390I CCNGG 3 cut(s) 262, 790, 849
Bme18I GGWCC 1 cut(s) 264
BmgT120I GGNCC 3 cut(s) 264, 827, 977
BmiI GGNNCC 1 cut(s) 954
BmrFI CCNGG 3 cut(s) 262, 790, 849
BmsI GCATC 2 cut(s) 561, 1008
BpmI CTGGAG 2 cut(s) 244, 1139
BpuEI CTTGAG 3 cut(s) 140, 253, 451
BpuMI CCSGG 1 cut(s) 790
BsaJI CCNNGG 2 cut(s) 479, 789
BsaWI WCCGGW 1 cut(s) 984
Bsc4I CCNNNNNNNGG 3 cut(s) 411, 444, 745
Bse118I RCCGGY 1 cut(s) 984
Bse1I ACTGG 2 cut(s) 812, 1122
Bse3DI GCAATG 4 cut(s) 290, 390, 868, 1041
BseBI CCWGG 2 cut(s) 262, 849
BseDI CCNNGG 2 cut(s) 479, 789
BseGI GGATG 5 cut(s) 453, 474, 754, 997, 1162
BseLI CCNNNNNNNGG 3 cut(s) 411, 444, 745
BseMI GCAATG 4 cut(s) 290, 390, 868, 1041
BseMII CTCAG 2 cut(s) 94, 288
BseNI ACTGG 2 cut(s) 812, 1122
BseRI GAGGAG 2 cut(s) 293, 1136
BseXI GCAGC 2 cut(s) 413, 802
BshFI GGCC 4 cut(s) 478, 643, 829, 979
BshNI GGYRCC 1 cut(s) 952
BshTI ACCGGT 1 cut(s) 984
BsiHKAI GWGCWC 1 cut(s) 1057
BsiSI CCGG 2 cut(s) 789, 985
BslFI GGGAC 2 cut(s) 427, 590
BslI CCNNNNNNNGG 3 cut(s) 411, 444, 745
BsmAI GTCTC 1 cut(s) 1133
BsmFI GGGAC 2 cut(s) 427, 590
BsmI GAATGC 1 cut(s) 843
BsnI GGCC 4 cut(s) 478, 643, 829, 979
Bsp1286I GDGCHC 3 cut(s) 437, 758, 1057
Bsp1407I TGTACA 1 cut(s) 967
Bsp143I GATC 2 cut(s) 36, 1102
BspACI CCGC 4 cut(s) 242, 731, 841, 852
BspANI GGCC 4 cut(s) 478, 643, 829, 979
BspCNI CTCAG 2 cut(s) 93, 287
BspLI GGNNCC 1 cut(s) 954
BspMI ACCTGC 1 cut(s) 619
BspPI GGATC 1 cut(s) 31
BspT107I GGYRCC 1 cut(s) 952
BsrBI CCGCTC 1 cut(s) 244
BsrDI GCAATG 4 cut(s) 290, 390, 868, 1041
BsrFI RCCGGY 1 cut(s) 984
BsrGI TGTACA 1 cut(s) 967
BsrI ACTGG 2 cut(s) 812, 1122
BssAI RCCGGY 1 cut(s) 984
BssECI CCNNGG 2 cut(s) 479, 789
BssMI GATC 2 cut(s) 36, 1102
BssT1I CCWWGG 1 cut(s) 479
Bst2UI CCWGG 2 cut(s) 262, 849
Bst4CI ACNGT 3 cut(s) 418, 705, 972
BstAUI TGTACA 1 cut(s) 967
BstC8I GCNNGC 5 cut(s) 550, 727, 731, 813, 1067
BstDEI CTNAG 2 cut(s) 80, 274
BstF5I GGATG 5 cut(s) 453, 474, 754, 997, 1162
BstHHI GCGC 2 cut(s) 774, 1048
BstKTI GATC 2 cut(s) 39, 1105
BstMAI GTCTC 1 cut(s) 1133
BstMBI GATC 2 cut(s) 36, 1102
BstMWI GCNNNNNNNGC 4 cut(s) 401, 849, 858, 1052
BstNI CCWGG 2 cut(s) 262, 849
BstSCI CCNGG 3 cut(s) 260, 788, 847
BstSFI CTRYAG 1 cut(s) 101
BstV1I GCAGC 2 cut(s) 413, 802
BstXI CCANNNNNNTGG 2 cut(s) 623, 765
BsuRI GGCC 4 cut(s) 478, 643, 829, 979
BtsCI GGATG 5 cut(s) 453, 474, 754, 997, 1162
BtsIMutI CAGTG 3 cut(s) 57, 588, 805
BveI ACCTGC 1 cut(s) 619
Cac8I GCNNGC 5 cut(s) 550, 727, 731, 813, 1067
CfoI GCGC 2 cut(s) 774, 1048
Cfr10I RCCGGY 1 cut(s) 984
Cfr13I GGNCC 3 cut(s) 264, 827, 977
Csp6I GTAC 4 cut(s) 451, 968, 992, 1096
CspAI ACCGGT 1 cut(s) 984
CviAII CATG 2 cut(s) 734, 796
CviQI GTAC 4 cut(s) 451, 968, 992, 1096
DdeI CTNAG 2 cut(s) 80, 274
DpnI GATC 2 cut(s) 38, 1104
DpnII GATC 2 cut(s) 36, 1102
DraI TTTAAA 1 cut(s) 346
Eco130I CCWWGG 1 cut(s) 479
Eco24I GRGCYC 2 cut(s) 437, 758
Eco47I GGWCC 1 cut(s) 264
Eco57I CTGAAG 1 cut(s) 564
EcoO109I RGGNCCY 1 cut(s) 264
EcoRII CCWGG 2 cut(s) 260, 847
EcoT14I CCWWGG 1 cut(s) 479
EcoT38I GRGCYC 2 cut(s) 437, 758
ErhI CCWWGG 1 cut(s) 479
FaeI CATG 2 cut(s) 737, 799
FalI AAGNNNNNCTT 2 cut(s) 324, 356
FaqI GGGAC 2 cut(s) 427, 590
FatI CATG 2 cut(s) 733, 795
FauI CCCGC 2 cut(s) 738, 845
FbaI TGATCA 1 cut(s) 1102
FblI GTMKAC 1 cut(s) 663
Fnu4HI GCNGC 2 cut(s) 402, 816
FokI GGATG 5 cut(s) 460, 481, 761, 984, 1169
FriOI GRGCYC 2 cut(s) 437, 758
Fsp4HI GCNGC 2 cut(s) 402, 816
FspBI CTAG 2 cut(s) 602, 899
GlaI GCGC 2 cut(s) 773, 1047
GluI GCNGC 2 cut(s) 402, 816
GsuI CTGGAG 2 cut(s) 244, 1139
HaeIII GGCC 4 cut(s) 478, 643, 829, 979
HapII CCGG 2 cut(s) 789, 985
HhaI GCGC 2 cut(s) 774, 1048
Hin1II CATG 2 cut(s) 737, 799
Hin6I GCGC 2 cut(s) 772, 1046
HinP1I GCGC 2 cut(s) 772, 1046
HinfI GANTC 4 cut(s) 278, 323, 381, 892
HpaII CCGG 2 cut(s) 789, 985
HphI GGTGA 4 cut(s) 195, 554, 830, 901
Hpy166II GTNNAC 3 cut(s) 95, 508, 664
Hpy188I TCNGA 5 cut(s) 83, 277, 528, 940, 1107
Hpy188III TCNNGA 4 cut(s) 157, 378, 430, 445
Hpy8I GTNNAC 3 cut(s) 95, 508, 664
HpyAV CCTTC 3 cut(s) 629, 818, 1102
HpyCH4III ACNGT 3 cut(s) 418, 705, 972
HpyCH4V TGCA 5 cut(s) 395, 401, 818, 904, 929
HpyF10VI GCNNNNNNNGC 4 cut(s) 401, 849, 858, 1052
HpyF3I CTNAG 2 cut(s) 80, 274
Hsp92II CATG 2 cut(s) 737, 799
HspAI GCGC 2 cut(s) 772, 1046
Ksp22I TGATCA 1 cut(s) 1102
Kzo9I GATC 2 cut(s) 36, 1102
LmnI GCTCC 1 cut(s) 858
Lsp1109I GCAGC 2 cut(s) 413, 802
LweI GCATC 2 cut(s) 561, 1008
MaeI CTAG 2 cut(s) 602, 899
MaeIII GTNAC 4 cut(s) 234, 574, 803, 889
MalI GATC 2 cut(s) 38, 1104
MbiI CCGCTC 1 cut(s) 244
MboI GATC 2 cut(s) 36, 1102
MboII GAAGA 3 cut(s) 231, 646, 673
MfeI CAATTG 1 cut(s) 396
MhlI GDGCHC 3 cut(s) 437, 758, 1057
MluCI AATT 5 cut(s) 109, 169, 347, 396, 421
MlyI GAGTC 1 cut(s) 886
MnlI CCTC 8 cut(s) 164, 249, 277, 314, 690, 1114, 1117, 1146
MroXI GAANNNNTTC 1 cut(s) 385
MseI TTAA 3 cut(s) 147, 345, 350
MslI CAYNNNNRTG 3 cut(s) 581, 621, 763
MspI CCGG 2 cut(s) 789, 985
MspR9I CCNGG 3 cut(s) 262, 790, 849
MunI CAATTG 1 cut(s) 396
Mva1269I GAATGC 1 cut(s) 843
MvaI CCWGG 2 cut(s) 262, 849
MwoI GCNNNNNNNGC 4 cut(s) 401, 849, 858, 1052
NciI CCSGG 1 cut(s) 790
NdeII GATC 2 cut(s) 36, 1102
NlaIII CATG 2 cut(s) 737, 799
NlaIV GGNNCC 1 cut(s) 954
NmuCI GTSAC 3 cut(s) 574, 803, 889
OliI CACNNNNGTG 2 cut(s) 581, 763
PaqCI CACCTGC 1 cut(s) 619
PctI GAATGC 1 cut(s) 843
PdmI GAANNNNTTC 1 cut(s) 385
PfeI GAWTC 3 cut(s) 278, 323, 381
PfoI TCCNGGA 1 cut(s) 260
PinAI ACCGGT 1 cut(s) 984
PkrI GCNGC 2 cut(s) 403, 817
PleI GAGTC 1 cut(s) 886
PpsI GAGTC 1 cut(s) 886
PpuMI RGGWCCY 1 cut(s) 264
Psp5II RGGWCCY 1 cut(s) 264
Psp6I CCWGG 2 cut(s) 260, 847
PspGI CCWGG 2 cut(s) 260, 847
PspN4I GGNNCC 1 cut(s) 954
PspPI GGNCC 3 cut(s) 264, 827, 977
PspPPI RGGWCCY 1 cut(s) 264
RsaI GTAC 4 cut(s) 452, 969, 993, 1097
RsaNI GTAC 4 cut(s) 451, 968, 992, 1096
RseI CAYNNNNRTG 3 cut(s) 581, 621, 763
SaqAI TTAA 3 cut(s) 147, 345, 350
SatI GCNGC 2 cut(s) 402, 816
Sau3AI GATC 2 cut(s) 36, 1102
Sau96I GGNCC 3 cut(s) 264, 827, 977
SchI GAGTC 1 cut(s) 886
ScrFI CCNGG 3 cut(s) 262, 790, 849
SduI GDGCHC 3 cut(s) 437, 758, 1057
SfaNI GCATC 2 cut(s) 561, 1008
SfcI CTRYAG 1 cut(s) 101
SinI GGWCC 1 cut(s) 264
SmiMI CAYNNNNRTG 3 cut(s) 581, 621, 763
SmlI CTYRAG 3 cut(s) 155, 268, 430
SmoI CTYRAG 3 cut(s) 155, 268, 430
SpeI ACTAGT 1 cut(s) 601
Sse9I AATT 5 cut(s) 109, 169, 347, 396, 421
SsiI CCGC 4 cut(s) 242, 731, 841, 852
SspMI CTAG 2 cut(s) 602, 899
StyD4I CCNGG 3 cut(s) 260, 788, 847
StyI CCWWGG 1 cut(s) 479
TaaI ACNGT 3 cut(s) 418, 705, 972
TaqI TCGA 1 cut(s) 1051
TasI AATT 5 cut(s) 109, 169, 347, 396, 421
TatI WGTACW 3 cut(s) 450, 967, 1095
TfiI GAWTC 3 cut(s) 278, 323, 381
Tru1I TTAA 3 cut(s) 147, 345, 350
Tru9I TTAA 3 cut(s) 147, 345, 350
TscAI CASTG 3 cut(s) 64, 588, 812
TseFI GTSAC 3 cut(s) 574, 803, 889
TseI GCWGC 2 cut(s) 401, 815
Tsp45I GTSAC 3 cut(s) 574, 803, 889
TspDTI ATGAA 5 cut(s) 315, 999, 1030, 1063, 1173
TspRI CASTG 3 cut(s) 64, 588, 812
VpaK11BI GGWCC 1 cut(s) 264
XapI RAATTY 1 cut(s) 169
XmiI GTMKAC 1 cut(s) 663
XmnI GAANNNNTTC 1 cut(s) 385
XspI CTAG 2 cut(s) 602, 899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.