Prupe.6G076100_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014119
Physical Location & Seq
Forward (+)
5227036 .. 5230259
3224 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G076100.1

Sequence Viewer

Length: 1335 bp
ATGAAGTGCTTCCATTTCACTAATGGGGAGAGGCGGGACGACGAGGAACCCGGCATCGTTTGTCGGGCGGCGTCGAAGGTGTCGTGGGCGCGTTCACTCAGCGTGGCCTCCAGCAGCTACGACACCACTCGGCGGTCTGAGTTCGACTTGGACTCGAGGGACCTGTCCGACTCGGTCGCCTTCCAGGAGTTGCTGAGCCTGCGGCGAGCCAATGATCTGAGGGTGTTCAAGTTCTCGGAGCTCAAGTCGGCGAGCAGAGGGTTCAGTAGGGCCCTGCTGATTGGGGAAGGAGGGTTTGGGTGCGTTTACAGAGGGATCGTTAAGGGCTCTGACGACGATGCCACTAAAATGGACGTTGCTATCAAACAGTTGAATCGTAATGGCTTCCAGGGGCATAAGGAGTGGATTAATGAAGTAAACTTATTGGGCGTTGTCAAGCACCCAAATCTTGTTAAGTTAGTGGGATATTGTGCAGAAGATGATGAAAGGGGGATTCAACGGCTTCTGGTTTATGAACTTATGCGTAATAAAAGCTTGGAGGACCATCTATTGGTTCGATTTCCATCATCTCTCCCATGGATGACAAGATTAAAAATTGCTCAAGACGCAGCACGTGGATTGGCATATCTGCATGAAGAAATGGATTTTCAGCTAATATTCCGCGATTTTAAACCGTCAAACATTCTGCTAGATGAGGACTTCAATGCAAAGCTTTCGGACTTTGGACTGGCAAGGCAGGGACCTCCAGAGGGAACGAGTCATGTTTCTACATCAGTTGTGGGCACCATAGGATATGCGGCGCCGGAATATGTACAAACAGGGAGGTTGACTGCCAAAAGTGATGTATGGAGCTTTGGAGTGGTTCTCTTTGAGCTCATCACAGGAAGGAGGGCGGTGGAGAGAAATTTGCCACGGAGTGAGCAAAAGCTTTTGGAATGGGTCAGGCCTTATGTTTCAGACTCAAAGAAATTCCACCTCATTGTGGACCATCGGCTTGAAGGACAGTTTTGCATCAAATCAGCTCAAAAACTTGCATCATTAGCTAACAGGTGTCTATCAAAACAACCAAAGTCTCGCCCAAAAATGAGTGAGGTGGTTGTGGTTTTAAGAAGCATCATAGATGAGCTGTCATCTCAAGATGAGGTTGTCCATGAACCTGTTATTGAAACTGAAGAAGCAAAGGAAGAAACTGTGGAGGAAACCGAGATCGAGACTACCAAACAAGGAAACAAAAAAAGGGTTTTCGATATAAGAGAAATGGTAAACTTTAGAAACAAATCTATTGGGAAGCTAGATTGGAGAAACTGGACCCCTGGGTTGATAAGAACTTGGTGA

Protein Analysis

445

Amino Acids

50.61

Weight (kDa)

7.64

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014119)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G28940 AT2G28940
fragaria_vesca FvH4_3g36210 FvH4_3g36210
malus_domestica MD00G1012400.v1.1 MD03G1092100.v1.1
prunus_persica Prupe.6G076100_v2.0.a1
pyrus_communis pycom03g07380 pycom11g08860
rosa_chinensis RchiOBHm_Chr5g0064981
rosa_laevigata RLG00000035746
rosa_multiflora Rmu_sc0003352.1_g000019
rosa_roxburghii Rroxscaffold_1G00016330
rosa_rugosa Rorug05G0367100
rosa_samantha Rh5BG440400 Rh5CG463000
rosa_wichuraiana Rw5G039980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 782, 799
AccB7I CCANNNNNTGG 1 cut(s) 550
AccII CGCG 2 cut(s) 91, 663
AciI CCGC 7 cut(s) 34, 68, 133, 202, 661, 797, 893
AclWI GGATC 1 cut(s) 323
AcsI RAATTY 2 cut(s) 904, 968
AcuI CTGAAG 1 cut(s) 1191
AcvI CACGTG 1 cut(s) 614
AcyI GRCGYC 2 cut(s) 71, 800
AdeI CACNNNGTG 1 cut(s) 917
AfaI GTAC 1 cut(s) 813
AfiI CCNNNNNNNGG 4 cut(s) 132, 550, 749, 982
AgsI TTSAA 6 cut(s) 229, 373, 497, 703, 998, 1166
AjnI CCWGG 3 cut(s) 183, 387, 1312
AjuI GAANNNNNNNTTGG 2 cut(s) 279, 311
Alw21I GWGCWC 2 cut(s) 243, 876
Alw26I GTCTC 2 cut(s) 1077, 1205
AlwI GGATC 1 cut(s) 323
Ama87I CYCGRG 1 cut(s) 154
AoxI GGCC 3 cut(s) 105, 270, 944
ApaI GGGCCC 1 cut(s) 274
ApeKI GCWGC 2 cut(s) 114, 608
ApoI RAATTY 2 cut(s) 904, 968
AseI ATTAAT 1 cut(s) 408
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 2 cut(s) 91, 802
AspS9I GGNCC 7 cut(s) 160, 270, 271, 541, 740, 985, 1308
AsuC2I CCSGG 1 cut(s) 51
AvaI CYCGRG 1 cut(s) 154
AvaII GGWCC 5 cut(s) 160, 541, 740, 985, 1308
BaeGI GKGCMC 2 cut(s) 274, 785
BanI GGYRCC 2 cut(s) 782, 799
BanII GRGCYC 4 cut(s) 243, 274, 329, 876
BbrPI CACGTG 1 cut(s) 614
Bbv12I GWGCWC 2 cut(s) 243, 876
BbvI GCAGC 2 cut(s) 126, 620
BccI CCATC 3 cut(s) 552, 571, 996
BceAI ACGGC 1 cut(s) 515
BcgI CGANNNNNNTGC 2 cut(s) 696, 730
BciT130I CCWGG 3 cut(s) 185, 389, 1314
BcnI CCSGG 1 cut(s) 51
BcoDI GTCTC 2 cut(s) 1077, 1205
BfaI CTAG 2 cut(s) 689, 1292
BfoI RGCGCY 1 cut(s) 803
BisI GCNGC 5 cut(s) 69, 115, 203, 609, 798
BlpI GCTNAGC 1 cut(s) 194
BlsI GCNGC 5 cut(s) 70, 116, 204, 610, 799
Bme1390I CCNGG 4 cut(s) 51, 185, 389, 1314
Bme18I GGWCC 5 cut(s) 160, 541, 740, 985, 1308
BmeT110I CYCGRG 1 cut(s) 154
BmgT120I GGNCC 7 cut(s) 160, 270, 271, 541, 740, 985, 1308
BmiI GGNNCC 7 cut(s) 48, 161, 272, 741, 784, 801, 1310
BmrFI CCNGG 4 cut(s) 51, 185, 389, 1314
BmsI GCATC 5 cut(s) 63, 328, 1020, 1043, 1122
BplI GAGNNNNNCTC 2 cut(s) 849, 881
BpmI CTGGAG 2 cut(s) 94, 729
Bpu1102I GCTNAGC 1 cut(s) 194
BpuEI CTTGAG 3 cut(s) 227, 585, 1119
BpuMI CCSGG 1 cut(s) 51
BsaAI YACGTR 1 cut(s) 614
BsaBI GATNNNNATC 1 cut(s) 562
BsaHI GRCGYC 2 cut(s) 71, 800
BsaJI CCNNGG 5 cut(s) 388, 575, 911, 1312, 1313
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 4 cut(s) 132, 550, 749, 982
Bse1I ACTGG 2 cut(s) 732, 1310
Bse8I GATNNNNATC 1 cut(s) 562
BseBI CCWGG 3 cut(s) 185, 389, 1314
BseDI CCNNGG 5 cut(s) 388, 575, 911, 1312, 1313
BseGI GGATG 1 cut(s) 585
BseJI GATNNNNATC 1 cut(s) 562
BseLI CCNNNNNNNGG 4 cut(s) 132, 550, 749, 982
BseMII CTCAG 4 cut(s) 112, 129, 185, 209
BseNI ACTGG 2 cut(s) 732, 1310
BseSI GKGCMC 2 cut(s) 274, 785
BseXI GCAGC 2 cut(s) 126, 620
BsgI GTGCAG 1 cut(s) 492
Bsh1236I CGCG 2 cut(s) 91, 663
Bsh1285I CGRYCG 1 cut(s) 177
BshFI GGCC 3 cut(s) 107, 272, 946
BshNI GGYRCC 2 cut(s) 782, 799
BsiEI CGRYCG 1 cut(s) 177
BsiHKAI GWGCWC 2 cut(s) 243, 876
BsiHKCI CYCGRG 1 cut(s) 154
BsiSI CCGG 2 cut(s) 51, 803
BslFI GGGAC 3 cut(s) 50, 173, 753
BslI CCNNNNNNNGG 4 cut(s) 132, 550, 749, 982
BsmAI GTCTC 2 cut(s) 1077, 1205
BsmFI GGGAC 3 cut(s) 50, 173, 753
BsnI GGCC 3 cut(s) 107, 272, 946
BsoBI CYCGRG 1 cut(s) 154
Bsp120I GGGCCC 1 cut(s) 270
Bsp1286I GDGCHC 5 cut(s) 243, 274, 329, 785, 876
Bsp1407I TGTACA 1 cut(s) 811
Bsp143I GATC 3 cut(s) 214, 315, 1206
Bsp1720I GCTNAGC 1 cut(s) 194
Bsp19I CCATGG 1 cut(s) 575
BspACI CCGC 7 cut(s) 34, 68, 133, 202, 661, 797, 893
BspANI GGCC 3 cut(s) 107, 272, 946
BspCNI CTCAG 4 cut(s) 111, 130, 186, 210
BspFNI CGCG 2 cut(s) 91, 663
BspLI GGNNCC 7 cut(s) 48, 161, 272, 741, 784, 801, 1310
BspPI GGATC 1 cut(s) 323
BspT107I GGYRCC 2 cut(s) 782, 799
BsrGI TGTACA 1 cut(s) 811
BsrI ACTGG 2 cut(s) 732, 1310
BssECI CCNNGG 5 cut(s) 388, 575, 911, 1312, 1313
BssMI GATC 3 cut(s) 214, 315, 1206
BssNI GRCGYC 2 cut(s) 71, 800
BssT1I CCWWGG 1 cut(s) 575
Bst2UI CCWGG 3 cut(s) 185, 389, 1314
Bst4CI ACNGT 4 cut(s) 369, 675, 1005, 1192
BstACI GRCGYC 2 cut(s) 71, 800
BstAUI TGTACA 1 cut(s) 811
BstBAI YACGTR 1 cut(s) 614
BstC8I GCNNGC 3 cut(s) 200, 207, 253
BstDEI CTNAG 4 cut(s) 98, 138, 194, 218
BstDSI CCRYGG 2 cut(s) 575, 911
BstF5I GGATG 1 cut(s) 585
BstFNI CGCG 2 cut(s) 91, 663
BstH2I RGCGCY 1 cut(s) 803
BstHHI GCGC 2 cut(s) 91, 802
BstKTI GATC 3 cut(s) 217, 318, 1209
BstMAI GTCTC 2 cut(s) 1077, 1205
BstMBI GATC 3 cut(s) 214, 315, 1206
BstMCI CGRYCG 1 cut(s) 177
BstMWI GCNNNNNNNGC 3 cut(s) 199, 605, 1040
BstNI CCWGG 3 cut(s) 185, 389, 1314
BstSCI CCNGG 4 cut(s) 49, 183, 387, 1312
BstSLI GKGCMC 2 cut(s) 274, 785
BstUI CGCG 2 cut(s) 91, 663
BstV1I GCAGC 2 cut(s) 126, 620
BstXI CCANNNNNNTGG 1 cut(s) 349
BsuRI GGCC 3 cut(s) 107, 272, 946
BtgI CCRYGG 2 cut(s) 575, 911
BtsCI GGATG 1 cut(s) 585
Cac8I GCNNGC 3 cut(s) 200, 207, 253
CfoI GCGC 2 cut(s) 91, 802
Cfr13I GGNCC 7 cut(s) 160, 270, 271, 541, 740, 985, 1308
CseI GACGC 2 cut(s) 60, 614
Csp6I GTAC 1 cut(s) 812
CviAII CATG 4 cut(s) 576, 632, 761, 1151
CviQI GTAC 1 cut(s) 812
DdeI CTNAG 4 cut(s) 98, 138, 194, 218
DinI GGCGCC 1 cut(s) 801
DpnI GATC 3 cut(s) 216, 317, 1208
DpnII GATC 3 cut(s) 214, 315, 1206
DraI TTTAAA 1 cut(s) 670
DraIII CACNNNGTG 1 cut(s) 917
Ecl136II GAGCTC 2 cut(s) 241, 874
Eco130I CCWWGG 1 cut(s) 575
Eco147I AGGCCT 1 cut(s) 946
Eco24I GRGCYC 4 cut(s) 243, 274, 329, 876
Eco47I GGWCC 5 cut(s) 160, 541, 740, 985, 1308
Eco53kI GAGCTC 2 cut(s) 241, 874
Eco57I CTGAAG 1 cut(s) 1191
Eco72I CACGTG 1 cut(s) 614
Eco88I CYCGRG 1 cut(s) 154
EcoICRI GAGCTC 2 cut(s) 241, 874
EcoO109I RGGNCCY 4 cut(s) 160, 270, 271, 740
EcoRII CCWGG 3 cut(s) 183, 387, 1312
EcoT14I CCWWGG 1 cut(s) 575
EcoT38I GRGCYC 4 cut(s) 243, 274, 329, 876
EgeI GGCGCC 1 cut(s) 801
EheI GGCGCC 1 cut(s) 801
ErhI CCWWGG 1 cut(s) 575
FaeI CATG 4 cut(s) 579, 635, 764, 1154
FaqI GGGAC 3 cut(s) 50, 173, 753
FatI CATG 4 cut(s) 575, 631, 760, 1150
FauI CCCGC 1 cut(s) 27
Fnu4HI GCNGC 5 cut(s) 69, 115, 203, 609, 798
FokI GGATG 1 cut(s) 592
FriOI GRGCYC 4 cut(s) 243, 274, 329, 876
Fsp4HI GCNGC 5 cut(s) 69, 115, 203, 609, 798
FspBI CTAG 2 cut(s) 689, 1292
GlaI GCGC 2 cut(s) 90, 801
GluI GCNGC 5 cut(s) 69, 115, 203, 609, 798
GsuI CTGGAG 2 cut(s) 94, 729
HaeII RGCGCY 1 cut(s) 803
HaeIII GGCC 3 cut(s) 107, 272, 946
HapII CCGG 2 cut(s) 51, 803
HgaI GACGC 2 cut(s) 60, 614
HhaI GCGC 2 cut(s) 91, 802
Hin1I GRCGYC 2 cut(s) 71, 800
Hin1II CATG 4 cut(s) 579, 635, 764, 1154
Hin6I GCGC 2 cut(s) 89, 800
HinP1I GCGC 2 cut(s) 89, 800
HincII GTYRAC 1 cut(s) 828
HindII GTYRAC 1 cut(s) 828
HindIII AAGCTT 3 cut(s) 532, 710, 926
HinfI GANTC 6 cut(s) 152, 170, 373, 493, 757, 959
HpaII CCGG 2 cut(s) 51, 803
Hpy166II GTNNAC 6 cut(s) 95, 307, 418, 828, 985, 1264
Hpy188I TCNGA 7 cut(s) 139, 169, 219, 238, 331, 718, 958
Hpy188III TCNNGA 4 cut(s) 602, 746, 1136, 1210
Hpy8I GTNNAC 6 cut(s) 95, 307, 418, 828, 985, 1264
Hpy99I CGWCG 3 cut(s) 44, 76, 338
HpyAV CCTTC 5 cut(s) 70, 190, 281, 879, 992
HpyCH4III ACNGT 4 cut(s) 369, 675, 1005, 1192
HpyCH4IV ACGT 2 cut(s) 354, 613
HpyCH4V TGCA 5 cut(s) 473, 631, 707, 1011, 1034
HpyF10VI GCNNNNNNNGC 3 cut(s) 199, 605, 1040
HpyF3I CTNAG 4 cut(s) 98, 138, 194, 218
HpySE526I ACGT 2 cut(s) 354, 613
Hsp92I GRCGYC 2 cut(s) 71, 800
Hsp92II CATG 4 cut(s) 579, 635, 764, 1154
HspAI GCGC 2 cut(s) 89, 800
KasI GGCGCC 1 cut(s) 799
Kzo9I GATC 3 cut(s) 214, 315, 1206
LmnI GCTCC 2 cut(s) 238, 849
Lsp1109I GCAGC 2 cut(s) 126, 620
LweI GCATC 5 cut(s) 63, 328, 1020, 1043, 1122
MaeI CTAG 2 cut(s) 689, 1292
MaeII ACGT 2 cut(s) 354, 613
MalI GATC 3 cut(s) 216, 317, 1208
MboI GATC 3 cut(s) 214, 315, 1206
MboII GAAGA 4 cut(s) 488, 647, 1184, 1196
MhlI GDGCHC 5 cut(s) 243, 274, 329, 785, 876
MluCI AATT 3 cut(s) 594, 904, 968
Mly113I GGCGCC 1 cut(s) 800
MlyI GAGTC 4 cut(s) 146, 164, 766, 953
MmeI TCCRAC 1 cut(s) 192
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 6 cut(s) 321, 408, 453, 590, 669, 1106
MslI CAYNNNNRTG 1 cut(s) 347
MspI CCGG 2 cut(s) 51, 803
MspR9I CCNGG 4 cut(s) 51, 185, 389, 1314
MvaI CCWGG 3 cut(s) 185, 389, 1314
MvnI CGCG 2 cut(s) 91, 663
MwoI GCNNNNNNNGC 3 cut(s) 199, 605, 1040
NarI GGCGCC 1 cut(s) 800
NciI CCSGG 1 cut(s) 51
NcoI CCATGG 1 cut(s) 575
NdeII GATC 3 cut(s) 214, 315, 1206
NlaIII CATG 4 cut(s) 579, 635, 764, 1154
NlaIV GGNNCC 7 cut(s) 48, 161, 272, 741, 784, 801, 1310
NmeAIII GCCGAG 1 cut(s) 109
PaeR7I CTCGAG 1 cut(s) 154
PasI CCCWGGG 1 cut(s) 1313
PceI AGGCCT 1 cut(s) 946
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 2 cut(s) 373, 493
PflFI GACNNNGTC 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 550
PfoI TCCNGGA 1 cut(s) 183
PkrI GCNGC 5 cut(s) 70, 116, 204, 610, 799
PleI GAGTC 4 cut(s) 146, 164, 765, 953
PluTI GGCGCC 1 cut(s) 803
PmaCI CACGTG 1 cut(s) 614
PmlI CACGTG 1 cut(s) 614
PpsI GAGTC 4 cut(s) 146, 164, 765, 953
Ppu21I YACGTR 1 cut(s) 614
PpuMI RGGWCCY 2 cut(s) 160, 740
PshBI ATTAAT 1 cut(s) 408
Psp124BI GAGCTC 2 cut(s) 243, 876
Psp5II RGGWCCY 2 cut(s) 160, 740
Psp6I CCWGG 3 cut(s) 183, 387, 1312
PspCI CACGTG 1 cut(s) 614
PspGI CCWGG 3 cut(s) 183, 387, 1312
PspN4I GGNNCC 7 cut(s) 48, 161, 272, 741, 784, 801, 1310
PspOMI GGGCCC 1 cut(s) 270
PspPI GGNCC 7 cut(s) 160, 270, 271, 541, 740, 985, 1308
PspPPI RGGWCCY 2 cut(s) 160, 740
PspXI VCTCGAGB 1 cut(s) 154
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 1 cut(s) 813
RsaNI GTAC 1 cut(s) 812
RseI CAYNNNNRTG 1 cut(s) 347
SacI GAGCTC 2 cut(s) 243, 876
SaqAI TTAA 6 cut(s) 321, 408, 453, 590, 669, 1106
SatI GCNGC 5 cut(s) 69, 115, 203, 609, 798
Sau3AI GATC 3 cut(s) 214, 315, 1206
Sau96I GGNCC 7 cut(s) 160, 270, 271, 541, 740, 985, 1308
SchI GAGTC 4 cut(s) 146, 164, 766, 953
ScrFI CCNGG 4 cut(s) 51, 185, 389, 1314
SduI GDGCHC 5 cut(s) 243, 274, 329, 785, 876
SfaNI GCATC 5 cut(s) 63, 328, 1020, 1043, 1122
SfoI GGCGCC 1 cut(s) 801
Sfr274I CTCGAG 1 cut(s) 154
SinI GGWCC 5 cut(s) 160, 541, 740, 985, 1308
SlaI CTCGAG 1 cut(s) 154
SmiMI CAYNNNNRTG 1 cut(s) 347
SmlI CTYRAG 4 cut(s) 154, 242, 600, 1134
SmoI CTYRAG 4 cut(s) 154, 242, 600, 1134
Sse9I AATT 3 cut(s) 594, 904, 968
SseBI AGGCCT 1 cut(s) 946
SsiI CCGC 7 cut(s) 34, 68, 133, 202, 661, 797, 893
SspDI GGCGCC 1 cut(s) 799
SspI AATATT 1 cut(s) 657
SspMI CTAG 2 cut(s) 689, 1292
SstI GAGCTC 2 cut(s) 243, 876
StuI AGGCCT 1 cut(s) 946
StyD4I CCNGG 4 cut(s) 49, 183, 387, 1312
StyI CCWWGG 1 cut(s) 575
TaaI ACNGT 4 cut(s) 369, 675, 1005, 1192
TaiI ACGT 2 cut(s) 357, 616
TaqI TCGA 6 cut(s) 74, 144, 155, 556, 1209, 1245
TaqII GACCGA 1 cut(s) 163
TasI AATT 3 cut(s) 594, 904, 968
TatI WGTACW 1 cut(s) 811
TauI GCSGC 3 cut(s) 71, 205, 800
TfiI GAWTC 2 cut(s) 373, 493
Tru1I TTAA 6 cut(s) 321, 408, 453, 590, 669, 1106
Tru9I TTAA 6 cut(s) 321, 408, 453, 590, 669, 1106
TseI GCWGC 2 cut(s) 114, 608
TspDTI ATGAA 6 cut(s) 17, 426, 498, 528, 648, 1167
TspGWI ACGGA 1 cut(s) 928
Tth111I GACNNNGTC 1 cut(s) 173
Van91I CCANNNNNTGG 1 cut(s) 550
VpaK11BI GGWCC 5 cut(s) 160, 541, 740, 985, 1308
VspI ATTAAT 1 cut(s) 408
XapI RAATTY 2 cut(s) 904, 968
XcmI CCANNNNNNNNNTGG 1 cut(s) 20
XhoI CTCGAG 1 cut(s) 154
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 2 cut(s) 689, 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.