Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010611

Physical Location & Seq

Genomic Coordinates Forward (+)

49025054 .. 49037498

Gene Structure 12445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0367100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGTCGCAGGCAGATATCAGAAAGTGGTTTATGAAATCGCATGACAAGGCCAATGCCTCCAAACCGGCTCCGGCTCCGGCTCCGGCTGCTTTGCCGAAACAGTCTACAGACCCCCCTCAAGAACAGAATGTGCATGGAGGTGAAGAAAATTCAGGCAGAAGGAAAACCAGCAAGTATTTTCCTCCAAAGCCGAATGAGGAAAAGGAAACAGTTGATGTTCCAGCAAAGCGGAAGACTCGACCGGATCCTGTTGAATCTAGCAGACCCTCGCCTGCAAAAAAAATTCAGAAGGTTGCTGACGACGACGATTTTGTTTTGCCTCAATCTAAAAAGAAAGAAGCCACGCCCAGCAAGAAACTGAAGAATGCATCTGGCATGGGAATTCCACAGAACCTGACGTCTGCAAATGAAAGTGATGATGATGAAGCCAAGGCTCCTCCCAAATCTGGTGGTAGGGGTCGTGGTGGAAGAGGTAGTTCATCGGCTGCACCAGCTGGTGGAAGGGGCAGAGGCGCTGGACGGGGTGGATTTATGAATTTTGGCGAAAGGAAAGATCCTCCACACAAAGGAGAAAAGGAGGTTCCTGAAGGTGATCCAAACTGTTTAGCTGGTTTAACTTTCGTAATAAGTGGTACACTGGATAGTTTGGAAAGAGAGGAGGCAGAAGATTTGATAAAACGTCATGGTGGTCGTATCACTGGATCTGTCAGCAAGAAAACGAGCTATCTTTTATGTGATGAAGATATTGAGGGCAGGAAATCCTCAAAAGCCAAAGAACTTGGGACGGCTTTCCTTACTGAGGATGGATTGTTTGATAAGATTCGGGCATCAATTCGTGCTAAAGCACCTGTGAAAGAAGAAAAGAAACCTGTGGATAGTGCACGAGAATCATCTCTGCCTAATAAAAGCCCTAAGAAAGTAGCATTAAAGAGTTCACCAGATTGCACTAGCAGCTCCTTGGCATGTAGGGTATCCCACAAACAGTCGCCATCAGATGCTTCCCTTGCTAGGCGCAAAGAGCAAACTACCGAGCATTCTGCTTTGACATGGACAGAAAAATATAGACCAAAGGTTCCAAATGACATTATTGGTAACCAGTCACTGGTAAAGCAGCTTCATGATTGGTTGGCACATTGGCATGAGCAATTCCGTGATACTGGAGTTAAGAAAAAAGGCAATAAACCAAACAATACAGGTGCTAAAAAAGCTGTACTATTAAGTGGAACACCCGGAATAGGGAAAACAACGTCAGCAAAGTTGGTCAGTCAGATGCTCGGTTTCCAGGCAATTGAGGTAAATGCAAGTGACAGTCGTGGGAAAGCTGATTCCAAGATTGTCAAGGGAATCGGTGGAAGCAATGCAAACTCTGTTAAAGAGCTCGTCAGCAATGAGGCCCTAAGCATGGATAGATCTATGCATCCCAAAACTGTGCTGATTATGGATGAGGTTGATGGGATGTCTGCTGGTGATCGGGGTGGAGTTGCTGATCTTATTGCTAGCATAAAGAGTTCTAAAATTCCCATTATCTGCATTTGTAATGATCGTTACAGTCAGAAACTGAAAAGTCTTGTGAACTACTGTTTGCTTCTCAGCTTCCGCAAACCCACTAAACAACAGATGGCAAAGAGGTTGAAGCAAGTTGCAAATGCTGAAGGACTTCAAGTGAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTTAATGGAGACATGCGAATGGCACTTAACCAGTTGCACTATATGAGTCTCTCGATGTCTGTCATAAAATATGAAGATGTAAGGCAACGCCTACTAAGCAGTGCAAAGGATGAGGATATTTCACCATTCACAGCTGTTGACAAGCTGTTTGGTTTCAATGCTGGAAAGTTGCGGATGGATGAGCGGTTTGACCTGAGCATGAGTGATCCAGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAACTACAGGCCAAGTGCGGCTGTGAAGGATGATAGTGGGGTTGAACGTATGAACTTGATTGCCCGTGCCGCTGAGTCTATTGGAAATGGGGATATTATCAATGTACAAATTAGAAAATATCGCCAATGGCAACTTTCCCAAAGTGGTTCTCTGTCATCCAGCATAATTCCAGCTGCTTTGTTGCGTGGGCAAAGGGAGACACTTGAGCAGGGAGAAAGAAATTTTAATAGATTTGGAGGTTGGCTAGGAAAGAACTCAACATTAGGCAAAAATCTGAGGCTCTTAGAAGATTTGCATTTCCATCTTCTTGCATCTCGTGAATCTAGTTCAGGGAGGGAGACCCTGCGAGTTGAATACCTTCCCCTACTTCTGAAACGATTGTCTGTGCCGCTGCGTAAATTATCGAAGGATGAAGCTGTTCAGGAAGTTGTGGAGTTCATGAATACTTACTCCATTAGTCAAGATGACTATGATACTATTGTAGAGTTATCAAAATTTAAGGGGCATCCAAATCCGCTGGATGGTGTTCAGCCAGCTGTAAAAGCAGCTCTTACAAAAGCATACAAAGAAGGAAGCAAATCAAGGATGGTACGAGTTGCAGAGTTTGTCACTTTCCCTGGAATGAAAAAGGCTCCTAAGAAGAGGATCGCAGCTATTTTAGAACCATCTGACGATGTAATTGGAGAGAACAATGATGATACTTTGGTTCTAAGTGAAGAAGAAAATTCATCTGATACAGAGGACTTGGAAAGCTCTGCTGTTGGGGAGAAGCTGCAACAGGAACTTCAAAGTTTGAATAAAAAAGGAGTGCAAGTTCAATTGGATTTGAAGGGTGCAACAAATCCAAGTGCCAAGAGGACACCAGCTGGAAGAGGTAAAGGTGCTTCTTCTGGTGCCTCTGAGAAAAAAGGTGGCCGAGGTTCAGGGTCTGGTGCCAAAAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000146 GO:0000166 GO:0000331 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0006928 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008144 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0016459 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022414 GO:0030029 GO:0030036 GO:0030048 GO:0030154 GO:0030554 GO:0030898 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0033275 GO:0035639 GO:0036094 GO:0040007 GO:0042623 GO:0042641 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043531 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051015 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051656 GO:0051704 GO:0060560 GO:0070252 GO:0071840 GO:0097159 GO:0097367 GO:0097435 GO:0097708 GO:0140027 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DIL IQ Myosin_N Myosin_head

Protein Analysis

964

Amino Acids

105.16

Weight (kDa)

9.46

Isoelectric Point (pI)

45.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRCT	PF00533	199 - 272	5.4e-17	BRCA1 C Terminus (BRCT) domain
PTCB-BRCT	PF12738	214 - 262	4.7e-06	twin BRCT domain
AAA_22	PF13401	401 - 491	8.1e-06	AAA domain
AAA	PF00004	404 - 517	3.9e-12	ATPase family associated with various cellular activities (AAA)
AAA_lid_RFC1	PF25361	538 - 594	2.6e-08	RFC1-like, AAA+ ATPase lid domain
RCF1-5-like_lid	PF21960	542 - 583	6.9e-07	RCF1/5-like, AAA+ ATPase lid domain
RFC1	PF08519	675 - 837	2.3e-40	Replication factor RFC1 C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010611)

Species	Orthologous Gene IDs
pyrus_communis	pycom16g19450
rosa_chinensis	RchiOBHm_Chr1g0345331 RchiOBHm_Chr5g0046581 RchiOBHm_Chr5g0055411 RchiOBHm_Chr7g0228401 RchiOBHm_Chr7g0228421
rosa_laevigata	RLG00000035747
rosa_multiflora	Rmu_sc0003033.1_g000053
rosa_roxburghii	Rroxscaffold_1G00034780 Rroxscaffold_3G00249570 Rroxscaffold_4G00279960
rosa_rugosa	Rorug01G0414400 Rorug05G0229600 Rorug05G0367100
rosa_samantha	Rh1AG437900 Rh1BG394200 Rh5AG310000 Rh5AG310100 Rh5BG318400 Rh5DG328700 Rh5DG328800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	401
AccB1I	GGYRCC	2 cut(s)	2837, 2876
AccB7I	CCANNNNNTGG	2 cut(s)	497, 1102
AccBSI	CCGCTC	1 cut(s)	1882
AccI	GTMKAC	1 cut(s)	104
AciI	CCGC	8 cut(s)	229, 1597, 1870, 1882, 1961, 2013, 2333, 2459
AclWI	GGATC	7 cut(s)	239, 252, 548, 587, 709, 1898, 2597
AcoI	YGGCCR	1 cut(s)	2857
AcsI	RAATTY	8 cut(s)	148, 282, 381, 535, 1515, 2164, 2438, 2668
AcuI	CTGAAG	3 cut(s)	380, 606, 1671
AcyI	GRCGYC	1 cut(s)	398
AfaI	GTAC	4 cut(s)	634, 1212, 2049, 2535
AjnI	CCWGG	2 cut(s)	1281, 2560
AloI	GAACNNNNNNTCC	2 cut(s)	2742, 2774
Alw21I	GWGCWC	2 cut(s)	883, 1380
Alw26I	GTCTC	4 cut(s)	1701, 1751, 2135, 2276
Alw44I	GTGCAC	1 cut(s)	879
AlwI	GGATC	7 cut(s)	239, 252, 548, 587, 709, 1898, 2597
AlwNI	CAGNNNCTG	4 cut(s)	394, 1102, 1558, 2873
AoxI	GGCC	4 cut(s)	48, 1392, 1952, 2857
ApaLI	GTGCAC	1 cut(s)	879
ApeKI	GCWGC	9 cut(s)	86, 485, 951, 1111, 2117, 2335, 2489, 2594, 2716
ApoI	RAATTY	8 cut(s)	148, 282, 381, 535, 1515, 2164, 2438, 2668
ArsI	GACNNNNNNTTYG	4 cut(s)	293, 325, 1829, 1861
Asp700I	GAANNNNTTC	3 cut(s)	1656, 2301, 2361
AspLEI	GCGC	2 cut(s)	515, 1014
AspS9I	GGNCC	1 cut(s)	1393
AsuC2I	CCSGG	1 cut(s)	1230
AsuHPI	GGTGA	5 cut(s)	152, 602, 927, 1478, 1812
AsuNHI	GCTAGC	1 cut(s)	1496
BaeGI	GKGCMC	1 cut(s)	883
BaeI	ACNNNNGTAYC	6 cut(s)	1146, 1179, 2409, 2442, 2634, 2667
BamHI	GGATCC	1 cut(s)	244
BanI	GGYRCC	2 cut(s)	2837, 2876
BanII	GRGCYC	1 cut(s)	1380
BarI	GAAGNNNNNNTAC	4 cut(s)	1098, 1130, 2812, 2844
BauI	CACGAG	2 cut(s)	882, 2259
BbsI	GAAGAC	1 cut(s)	239
Bbv12I	GWGCWC	2 cut(s)	883, 1380
BbvI	GCAGC	9 cut(s)	73, 472, 963, 1123, 2104, 2322, 2501, 2606, 2703
BccI	CCATC	9 cut(s)	797, 997, 1445, 1612, 1867, 2253, 2459, 2524, 2617
BceAI	ACGGC	1 cut(s)	801
BcgI	CGANNNNNNTGC	2 cut(s)	1019, 1053
BciT130I	CCWGG	2 cut(s)	1283, 2562
BciVI	GTATCC	1 cut(s)	982
BcnI	CCSGG	1 cut(s)	1230
BcoDI	GTCTC	4 cut(s)	1701, 1751, 2135, 2276
BfaI	CTAG	7 cut(s)	258, 948, 1008, 1497, 1913, 2189, 2268
BfmI	CTRYAG	2 cut(s)	105, 1948
BfoI	RGCGCY	1 cut(s)	516
BfuI	GTATCC	1 cut(s)	982
BglII	AGATCT	2 cut(s)	1409, 1909
Bme1390I	CCNGG	3 cut(s)	1230, 1283, 2562
BmgT120I	GGNCC	1 cut(s)	1393
BmrFI	CCNGG	3 cut(s)	1230, 1283, 2562
BmsI	GCATC	7 cut(s)	377, 836, 985, 1260, 1426, 2264, 2458
BmtI	GCTAGC	1 cut(s)	1500
BpiI	GAAGAC	1 cut(s)	239
BpmI	CTGGAG	1 cut(s)	1179
Bpu10I	CCTNAGC	2 cut(s)	1397, 1892
BpuEI	CTTGAG	3 cut(s)	102, 1700, 2168
BpuMI	CCSGG	1 cut(s)	1230
BsaBI	GATNNNNATC	1 cut(s)	1908
BsaHI	GRCGYC	1 cut(s)	398
BsaI	GGTCTC	1 cut(s)	2276
BsaJI	CCNNGG	4 cut(s)	429, 957, 2560, 2860
BsaWI	WCCGGW	1 cut(s)	241
BsaXI	ACNNNNNCTCC	2 cut(s)	2742, 2772
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	6 cut(s)	642, 703, 1096, 1107, 1162, 1729
Bse3DI	GCAATG	2 cut(s)	1363, 1393
Bse8I	GATNNNNATC	1 cut(s)	1908
BseBI	CCWGG	2 cut(s)	1283, 2562
BseDI	CCNNGG	4 cut(s)	429, 957, 2560, 2860
BseJI	GATNNNNATC	1 cut(s)	1908
BseMI	GCAATG	2 cut(s)	1363, 1393
BseMII	CTCAG	6 cut(s)	789, 1603, 1883, 2007, 2210, 2835
BseNI	ACTGG	6 cut(s)	642, 703, 1096, 1107, 1162, 1729
BseRI	GAGGAG	2 cut(s)	426, 671
BseSI	GKGCMC	1 cut(s)	883
BseXI	GCAGC	9 cut(s)	73, 472, 963, 1123, 2104, 2322, 2501, 2606, 2703
BseYI	CCCAGC	1 cut(s)	347
BsgI	GTGCAG	1 cut(s)	471
Bsh1285I	CGRYCG	1 cut(s)	242
BshFI	GGCC	4 cut(s)	50, 1394, 1954, 2859
BshNI	GGYRCC	2 cut(s)	2837, 2876
BsiEI	CGRYCG	1 cut(s)	242
BsiHKAI	GWGCWC	2 cut(s)	883, 1380
BsiSI	CCGG	6 cut(s)	65, 71, 77, 83, 242, 1230
BslFI	GGGAC	2 cut(s)	796, 1901
BsmAI	GTCTC	4 cut(s)	1701, 1751, 2135, 2276
BsmFI	GGGAC	2 cut(s)	796, 1901
BsmI	GAATGC	2 cut(s)	370, 1033
BsnI	GGCC	4 cut(s)	50, 1394, 1954, 2859
Bso31I	GGTCTC	1 cut(s)	2276
Bsp1286I	GDGCHC	2 cut(s)	883, 1380
Bsp1407I	TGTACA	1 cut(s)	2047
BspACI	CCGC	8 cut(s)	229, 1597, 1870, 1882, 1961, 2013, 2333, 2459
BspANI	GGCC	4 cut(s)	50, 1394, 1954, 2859
BspCNI	CTCAG	6 cut(s)	790, 1602, 1884, 2008, 2211, 2836
BspHI	TCATGA	2 cut(s)	1117, 2382
BspOI	GCTAGC	1 cut(s)	1500
BspPI	GGATC	7 cut(s)	239, 252, 548, 587, 709, 1898, 2597
BspT107I	GGYRCC	2 cut(s)	2837, 2876
BspTNI	GGTCTC	1 cut(s)	2276
BsrBI	CCGCTC	1 cut(s)	1882
BsrDI	GCAATG	2 cut(s)	1363, 1393
BsrFI	RCCGGY	1 cut(s)	64
BsrGI	TGTACA	1 cut(s)	2047
BsrI	ACTGG	6 cut(s)	642, 703, 1096, 1107, 1162, 1729
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	4 cut(s)	429, 957, 2560, 2860
BssNI	GRCGYC	1 cut(s)	398
BssSI	CACGAG	2 cut(s)	882, 2259
BssT1I	CCWWGG	2 cut(s)	429, 957
Bst2BI	CACGAG	2 cut(s)	882, 2259
Bst2UI	CCWGG	2 cut(s)	1283, 2562
Bst4CI	ACNGT	8 cut(s)	102, 211, 602, 984, 1310, 1429, 1550, 1580
Bst6I	CTCTTC	4 cut(s)	463, 1926, 2579, 2809
BstACI	GRCGYC	1 cut(s)	398
BstAUI	TGTACA	1 cut(s)	2047
BstC8I	GCNNGC	4 cut(s)	9, 273, 1498, 2478
BstEII	GGTNACC	1 cut(s)	1091
BstENI	CCTNNNNNAGG	1 cut(s)	797
BstH2I	RGCGCY	1 cut(s)	516
BstHHI	GCGC	2 cut(s)	515, 1014
BstMAI	GTCTC	4 cut(s)	1701, 1751, 2135, 2276
BstMCI	CGRYCG	1 cut(s)	242
BstMWI	GCNNNNNNNGC	9 cut(s)	86, 491, 951, 1004, 1018, 1205, 1794, 2012, 2486
BstNI	CCWGG	2 cut(s)	1283, 2562
BstNSI	RCATGY	2 cut(s)	966, 1714
BstPI	GGTNACC	1 cut(s)	1091
BstSCI	CCNGG	3 cut(s)	1228, 1281, 2560
BstSFI	CTRYAG	2 cut(s)	105, 1948
BstSLI	GKGCMC	1 cut(s)	883
BstV1I	GCAGC	9 cut(s)	73, 472, 963, 1123, 2104, 2322, 2501, 2606, 2703
BstV2I	GAAGAC	1 cut(s)	239
BstX2I	RGATCY	5 cut(s)	244, 553, 701, 1409, 1909
BstYI	RGATCY	5 cut(s)	244, 553, 701, 1409, 1909
BsuI	GTATCC	1 cut(s)	982
BsuRI	GGCC	4 cut(s)	50, 1394, 1954, 2859
BtsI	GCAGTG	1 cut(s)	1804
BtsIMutI	CAGTG	4 cut(s)	635, 696, 1100, 1804
Cac8I	GCNNGC	4 cut(s)	9, 273, 1498, 2478
CaiI	CAGNNNCTG	4 cut(s)	394, 1102, 1558, 2873
CciI	TCATGA	2 cut(s)	1117, 2382
CfoI	GCGC	2 cut(s)	515, 1014
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	1 cut(s)	1393
Csp6I	GTAC	4 cut(s)	633, 1211, 2048, 2534
CspCI	CAANNNNNGTGG	2 cut(s)	430, 465
CviQI	GTAC	4 cut(s)	633, 1211, 2048, 2534
EaeI	YGGCCR	1 cut(s)	2857
Eam1104I	CTCTTC	4 cut(s)	463, 1926, 2579, 2809
EarI	CTCTTC	4 cut(s)	463, 1926, 2579, 2809
Ecl136II	GAGCTC	1 cut(s)	1378
Eco130I	CCWWGG	2 cut(s)	429, 957
Eco24I	GRGCYC	1 cut(s)	1380
Eco31I	GGTCTC	1 cut(s)	2276
Eco32I	GATATC	1 cut(s)	16
Eco53kI	GAGCTC	1 cut(s)	1378
Eco57I	CTGAAG	3 cut(s)	380, 606, 1671
Eco91I	GGTNACC	1 cut(s)	1091
EcoICRI	GAGCTC	1 cut(s)	1378
EcoNI	CCTNNNNNAGG	1 cut(s)	797
EcoO109I	RGGNCCY	1 cut(s)	1393
EcoO65I	GGTNACC	1 cut(s)	1091
EcoRI	GAATTC	1 cut(s)	381
EcoRII	CCWGG	2 cut(s)	1281, 2560
EcoRV	GATATC	1 cut(s)	16
EcoT14I	CCWWGG	2 cut(s)	429, 957
EcoT22I	ATGCAT	2 cut(s)	370, 1419
EcoT38I	GRGCYC	1 cut(s)	1380
ErhI	CCWWGG	2 cut(s)	429, 957
FalI	AAGNNNNNCTT	2 cut(s)	2478, 2510
FaqI	GGGAC	2 cut(s)	796, 1901
FblI	GTMKAC	1 cut(s)	104
FriOI	GRGCYC	1 cut(s)	1380
FspBI	CTAG	7 cut(s)	258, 948, 1008, 1497, 1913, 2189, 2268
GlaI	GCGC	2 cut(s)	514, 1013
GsaI	CCCAGC	1 cut(s)	351
GsuI	CTGGAG	1 cut(s)	1179
HaeII	RGCGCY	1 cut(s)	516
HaeIII	GGCC	4 cut(s)	50, 1394, 1954, 2859
HapII	CCGG	6 cut(s)	65, 71, 77, 83, 242, 1230
HhaI	GCGC	2 cut(s)	515, 1014
Hin1I	GRCGYC	1 cut(s)	398
Hin6I	GCGC	2 cut(s)	513, 1012
HinP1I	GCGC	2 cut(s)	513, 1012
HincII	GTYRAC	1 cut(s)	1837
HindII	GTYRAC	1 cut(s)	1837
HinfI	GANTC	9 cut(s)	235, 254, 820, 887, 1325, 1344, 1744, 2018, 2264
HpaII	CCGG	6 cut(s)	65, 71, 77, 83, 242, 1230
HphI	GGTGA	5 cut(s)	152, 602, 927, 1478, 1812
Hpy166II	GTNNAC	6 cut(s)	105, 635, 881, 935, 1573, 1837
Hpy8I	GTNNAC	6 cut(s)	105, 635, 881, 935, 1573, 1837
Hpy99I	CGWCG	2 cut(s)	305, 308
HpyCH4III	ACNGT	8 cut(s)	102, 211, 602, 984, 1310, 1429, 1550, 1580
HpyCH4IV	ACGT	4 cut(s)	398, 679, 1247, 1990
HpyF10VI	GCNNNNNNNGC	9 cut(s)	86, 491, 951, 1004, 1018, 1205, 1794, 2012, 2486
HpySE526I	ACGT	4 cut(s)	398, 679, 1247, 1990
Hsp92I	GRCGYC	1 cut(s)	398
HspAI	GCGC	2 cut(s)	513, 1012
LmnI	GCTCC	6 cut(s)	73, 79, 85, 439, 959, 2581
Lsp1109I	GCAGC	9 cut(s)	73, 472, 963, 1123, 2104, 2322, 2501, 2606, 2703
LweI	GCATC	7 cut(s)	377, 836, 985, 1260, 1426, 2264, 2458
MaeI	CTAG	7 cut(s)	258, 948, 1008, 1497, 1913, 2189, 2268
MaeII	ACGT	4 cut(s)	398, 679, 1247, 1990
MaeIII	GTNAC	5 cut(s)	1091, 1098, 1304, 1544, 2551
MbiI	CCGCTC	1 cut(s)	1882
MfeI	CAATTG	2 cut(s)	1287, 2762
MflI	RGATCY	5 cut(s)	244, 553, 701, 1409, 1909
MhlI	GDGCHC	2 cut(s)	883, 1380
MlyI	GAGTC	3 cut(s)	229, 1753, 2027
Mph1103I	ATGCAT	2 cut(s)	370, 1419
MroXI	GAANNNNTTC	3 cut(s)	1656, 2301, 2361
MslI	CAYNNNNRTG	3 cut(s)	138, 1137, 1715
MspA1I	CMGCKG	8 cut(s)	494, 1832, 2015, 2117, 2335, 2461, 2480, 2810
MspI	CCGG	6 cut(s)	65, 71, 77, 83, 242, 1230
MspR9I	CCNGG	3 cut(s)	1230, 1283, 2562
MunI	CAATTG	2 cut(s)	1287, 2762
Mva1269I	GAATGC	2 cut(s)	370, 1033
MvaI	CCWGG	2 cut(s)	1283, 2562
MwoI	GCNNNNNNNGC	9 cut(s)	86, 491, 951, 1004, 1018, 1205, 1794, 2012, 2486
NciI	CCSGG	1 cut(s)	1230
NheI	GCTAGC	1 cut(s)	1496
NmeAIII	GCCGAG	1 cut(s)	2885
NmuCI	GTSAC	3 cut(s)	1098, 1304, 2551
NsiI	ATGCAT	2 cut(s)	370, 1419
NspI	RCATGY	2 cut(s)	966, 1714
PagI	TCATGA	2 cut(s)	1117, 2382
PctI	GAATGC	2 cut(s)	370, 1033
PdmI	GAANNNNTTC	3 cut(s)	1656, 2301, 2361
PfeI	GAWTC	6 cut(s)	254, 820, 887, 1325, 1344, 2264
PflMI	CCANNNNNTGG	2 cut(s)	497, 1102
PleI	GAGTC	3 cut(s)	229, 1752, 2026
PpsI	GAGTC	3 cut(s)	229, 1752, 2026
Psp124BI	GAGCTC	1 cut(s)	1380
Psp6I	CCWGG	2 cut(s)	1281, 2560
PspEI	GGTNACC	1 cut(s)	1091
PspFI	CCCAGC	1 cut(s)	347
PspGI	CCWGG	2 cut(s)	1281, 2560
PspPI	GGNCC	1 cut(s)	1393
PstNI	CAGNNNCTG	4 cut(s)	394, 1102, 1558, 2873
PsuI	RGATCY	5 cut(s)	244, 553, 701, 1409, 1909
PvuII	CAGCTG	5 cut(s)	494, 1832, 2117, 2480, 2810
RsaI	GTAC	4 cut(s)	634, 1212, 2049, 2535
RsaNI	GTAC	4 cut(s)	633, 1211, 2048, 2534
RseI	CAYNNNNRTG	3 cut(s)	138, 1137, 1715
SacI	GAGCTC	1 cut(s)	1380
Sau96I	GGNCC	1 cut(s)	1393
SchI	GAGTC	3 cut(s)	229, 1753, 2027
ScrFI	CCNGG	3 cut(s)	1230, 1283, 2562
SduI	GDGCHC	2 cut(s)	883, 1380
SfaNI	GCATC	7 cut(s)	377, 836, 985, 1260, 1426, 2264, 2458
SfcI	CTRYAG	2 cut(s)	105, 1948
SmiMI	CAYNNNNRTG	3 cut(s)	138, 1137, 1715
SmlI	CTYRAG	3 cut(s)	117, 1679, 2147
SmoI	CTYRAG	3 cut(s)	117, 1679, 2147
SsiI	CCGC	8 cut(s)	229, 1597, 1870, 1882, 1961, 2013, 2333, 2459
SspMI	CTAG	7 cut(s)	258, 948, 1008, 1497, 1913, 2189, 2268
SstI	GAGCTC	1 cut(s)	1380
StyD4I	CCNGG	3 cut(s)	1228, 1281, 2560
StyI	CCWWGG	2 cut(s)	429, 957
TaaI	ACNGT	8 cut(s)	102, 211, 602, 984, 1310, 1429, 1550, 1580
TaiI	ACGT	4 cut(s)	401, 682, 1250, 1993
TaqI	TCGA	3 cut(s)	238, 1751, 2348
TatI	WGTACW	2 cut(s)	1210, 2047
TauI	GCSGC	3 cut(s)	1964, 2015, 2335
TfiI	GAWTC	6 cut(s)	254, 820, 887, 1325, 1344, 2264
TscAI	CASTG	4 cut(s)	642, 703, 1107, 1804
TseFI	GTSAC	3 cut(s)	1098, 1304, 2551
TseI	GCWGC	9 cut(s)	86, 485, 951, 1111, 2117, 2335, 2489, 2594, 2716
Tsp45I	GTSAC	3 cut(s)	1098, 1304, 2551
TspGWI	ACGGA	1 cut(s)	1139
TspRI	CASTG	4 cut(s)	642, 703, 1107, 1804
Van91I	CCANNNNNTGG	2 cut(s)	497, 1102
VneI	GTGCAC	1 cut(s)	879
XagI	CCTNNNNNAGG	1 cut(s)	797
XapI	RAATTY	8 cut(s)	148, 282, 381, 535, 1515, 2164, 2438, 2668
XceI	RCATGY	2 cut(s)	966, 1714
XmiI	GTMKAC	1 cut(s)	104
XmnI	GAANNNNTTC	3 cut(s)	1656, 2301, 2361
XspI	CTAG	7 cut(s)	258, 948, 1008, 1497, 1913, 2189, 2268
ZraI	GACGTC	1 cut(s)	399
Zsp2I	ATGCAT	2 cut(s)	370, 1419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.