WRKY Transcription Factor
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom16g19450 |
| rosa_chinensis | RchiOBHm_Chr1g0345331 RchiOBHm_Chr5g0046581 RchiOBHm_Chr5g0055411 RchiOBHm_Chr7g0228401 RchiOBHm_Chr7g0228421 |
| rosa_laevigata | RLG00000035747 |
| rosa_multiflora | Rmu_sc0003033.1_g000053 |
| rosa_roxburghii | Rroxscaffold_1G00034780 Rroxscaffold_3G00249570 Rroxscaffold_4G00279960 |
| rosa_rugosa | Rorug01G0414400 Rorug05G0229600 Rorug05G0367100 |
| rosa_samantha | Rh1AG437900 Rh1BG394200 Rh5AG310000 Rh5AG310100 Rh5BG318400 Rh5DG328700 Rh5DG328800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 203 |
| Acc36I | ACCTGC | 1 cut(s) | 215 |
| AccB1I | GGYRCC | 1 cut(s) | 238 |
| AcoI | YGGCCR | 2 cut(s) | 169, 222 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 213 |
| AgsI | TTSAA | 2 cut(s) | 41, 164 |
| AluBI | AGCT | 1 cut(s) | 141 |
| AluI | AGCT | 1 cut(s) | 141 |
| AoxI | GGCC | 3 cut(s) | 33, 169, 222 |
| AspS9I | GGNCC | 1 cut(s) | 34 |
| BalI | TGGCCA | 2 cut(s) | 171, 224 |
| BanI | GGYRCC | 1 cut(s) | 238 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| BccI | CCATC | 1 cut(s) | 161 |
| BfuAI | ACCTGC | 1 cut(s) | 215 |
| BmgT120I | GGNCC | 1 cut(s) | 34 |
| BmiI | GGNNCC | 1 cut(s) | 240 |
| BmsI | GCATC | 1 cut(s) | 144 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| BpmI | CTGGAG | 1 cut(s) | 199 |
| BsaJI | CCNNGG | 2 cut(s) | 30, 211 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 213 |
| Bse3DI | GCAATG | 1 cut(s) | 93 |
| BseDI | CCNNGG | 2 cut(s) | 30, 211 |
| BseGI | GGATG | 1 cut(s) | 159 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 213 |
| BseMI | GCAATG | 1 cut(s) | 93 |
| BseMII | CTCAG | 1 cut(s) | 114 |
| BshFI | GGCC | 3 cut(s) | 35, 171, 224 |
| BshNI | GGYRCC | 1 cut(s) | 238 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 213 |
| BsnI | GGCC | 3 cut(s) | 35, 171, 224 |
| Bsp19I | CCATGG | 1 cut(s) | 211 |
| BspANI | GGCC | 3 cut(s) | 35, 171, 224 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspLI | GGNNCC | 1 cut(s) | 240 |
| BspMI | ACCTGC | 1 cut(s) | 215 |
| BspT107I | GGYRCC | 1 cut(s) | 238 |
| BsrDI | GCAATG | 1 cut(s) | 93 |
| BssECI | CCNNGG | 2 cut(s) | 30, 211 |
| BssT1I | CCWWGG | 2 cut(s) | 30, 211 |
| BstDEI | CTNAG | 1 cut(s) | 123 |
| BstDSI | CCRYGG | 1 cut(s) | 211 |
| BstF5I | GGATG | 1 cut(s) | 159 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BsuRI | GGCC | 3 cut(s) | 35, 171, 224 |
| BtgI | CCRYGG | 1 cut(s) | 211 |
| BtsCI | GGATG | 1 cut(s) | 159 |
| BveI | ACCTGC | 1 cut(s) | 215 |
| Cfr13I | GGNCC | 1 cut(s) | 34 |
| CviAII | CATG | 1 cut(s) | 212 |
| CviJI | RGCY | 4 cut(s) | 35, 141, 171, 224 |
| CviKI_1 | RGCY | 4 cut(s) | 35, 141, 171, 224 |
| DdeI | CTNAG | 1 cut(s) | 123 |
| EaeI | YGGCCR | 2 cut(s) | 169, 222 |
| Eco130I | CCWWGG | 2 cut(s) | 30, 211 |
| EcoO109I | RGGNCCY | 1 cut(s) | 34 |
| EcoT14I | CCWWGG | 2 cut(s) | 30, 211 |
| ErhI | CCWWGG | 2 cut(s) | 30, 211 |
| FaeI | CATG | 1 cut(s) | 215 |
| FaiI | YATR | 6 cut(s) | 57, 118, 174, 189, 203, 213 |
| FatI | CATG | 1 cut(s) | 211 |
| FokI | GGATG | 1 cut(s) | 166 |
| GsuI | CTGGAG | 1 cut(s) | 199 |
| HaeIII | GGCC | 3 cut(s) | 35, 171, 224 |
| Hin1II | CATG | 1 cut(s) | 215 |
| HinfI | GANTC | 1 cut(s) | 106 |
| Hpy166II | GTNNAC | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 1 cut(s) | 232 |
| Hpy188III | TCNNGA | 2 cut(s) | 161, 178 |
| Hpy8I | GTNNAC | 1 cut(s) | 267 |
| HpyAV | CCTTC | 1 cut(s) | 292 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 22 |
| HpyF3I | CTNAG | 1 cut(s) | 123 |
| Hsp92II | CATG | 1 cut(s) | 215 |
| LpnPI | CCDG | 4 cut(s) | 129, 163, 220, 221 |
| LweI | GCATC | 1 cut(s) | 144 |
| MboII | GAAGA | 2 cut(s) | 80, 176 |
| MlsI | TGGCCA | 2 cut(s) | 171, 224 |
| MluCI | AATT | 1 cut(s) | 65 |
| MluNI | TGGCCA | 2 cut(s) | 171, 224 |
| MlyI | GAGTC | 1 cut(s) | 100 |
| MnlI | CCTC | 2 cut(s) | 168, 252 |
| Mox20I | TGGCCA | 2 cut(s) | 171, 224 |
| MscI | TGGCCA | 2 cut(s) | 171, 224 |
| MseI | TTAA | 2 cut(s) | 68, 77 |
| Msp20I | TGGCCA | 2 cut(s) | 171, 224 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 22 |
| NcoI | CCATGG | 1 cut(s) | 211 |
| NlaIII | CATG | 1 cut(s) | 215 |
| NlaIV | GGNNCC | 1 cut(s) | 240 |
| PflFI | GACNNNGTC | 1 cut(s) | 109 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PsiI | TTATAA | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 1 cut(s) | 240 |
| PspPI | GGNCC | 1 cut(s) | 34 |
| PsyI | GACNNNGTC | 1 cut(s) | 109 |
| SaqAI | TTAA | 2 cut(s) | 68, 77 |
| Sau96I | GGNCC | 1 cut(s) | 34 |
| SchI | GAGTC | 1 cut(s) | 100 |
| SetI | ASST | 4 cut(s) | 143, 209, 240, 264 |
| SfaNI | GCATC | 1 cut(s) | 144 |
| SgeI | CNNG | 9 cut(s) | 43, 50, 140, 156, 173, 190, 219, 224, 248 |
| Sse9I | AATT | 1 cut(s) | 65 |
| SspI | AATATT | 1 cut(s) | 81 |
| StyI | CCWWGG | 2 cut(s) | 30, 211 |
| TasI | AATT | 1 cut(s) | 65 |
| Tru1I | TTAA | 2 cut(s) | 68, 77 |
| Tru9I | TTAA | 2 cut(s) | 68, 77 |
| TspDTI | ATGAA | 3 cut(s) | 17, 23, 77 |
| Tth111I | GACNNNGTC | 1 cut(s) | 109 |