WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom16g19450 |
| rosa_chinensis | RchiOBHm_Chr1g0345331 RchiOBHm_Chr5g0046581 RchiOBHm_Chr5g0055411 RchiOBHm_Chr7g0228401 RchiOBHm_Chr7g0228421 |
| rosa_laevigata | RLG00000035747 |
| rosa_multiflora | Rmu_sc0003033.1_g000053 |
| rosa_roxburghii | Rroxscaffold_1G00034780 Rroxscaffold_3G00249570 Rroxscaffold_4G00279960 |
| rosa_rugosa | Rorug01G0414400 Rorug05G0229600 Rorug05G0367100 |
| rosa_samantha | Rh1AG437900 Rh1BG394200 Rh5AG310000 Rh5AG310100 Rh5BG318400 Rh5DG328700 Rh5DG328800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 221 |
| AclI | AACGTT | 1 cut(s) | 179 |
| AcoI | YGGCCR | 1 cut(s) | 304 |
| AcsI | RAATTY | 1 cut(s) | 335 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 221 |
| AgsI | TTSAA | 2 cut(s) | 134, 168 |
| AluBI | AGCT | 1 cut(s) | 276 |
| AluI | AGCT | 1 cut(s) | 276 |
| AoxI | GGCC | 2 cut(s) | 126, 304 |
| ApoI | RAATTY | 1 cut(s) | 335 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 335 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| BalI | TGGCCA | 1 cut(s) | 306 |
| BccI | CCATC | 1 cut(s) | 296 |
| BfaI | CTAG | 1 cut(s) | 340 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BmrI | ACTGGG | 1 cut(s) | 45 |
| BmsI | GCATC | 2 cut(s) | 135, 279 |
| BmuI | ACTGGG | 1 cut(s) | 45 |
| BpmI | CTGGAG | 1 cut(s) | 334 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 221 |
| Bse1I | ACTGG | 1 cut(s) | 40 |
| Bse3DI | GCAATG | 3 cut(s) | 100, 201, 231 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 294 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 221 |
| BseMI | GCAATG | 3 cut(s) | 100, 201, 231 |
| BseNI | ACTGG | 1 cut(s) | 40 |
| BshFI | GGCC | 2 cut(s) | 128, 306 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 221 |
| BsmI | GAATGC | 2 cut(s) | 56, 91 |
| BsnI | GGCC | 2 cut(s) | 128, 306 |
| BspANI | GGCC | 2 cut(s) | 128, 306 |
| BsrDI | GCAATG | 3 cut(s) | 100, 201, 231 |
| BsrI | ACTGG | 1 cut(s) | 40 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssT1I | CCWWGG | 1 cut(s) | 123 |
| Bst4CI | ACNGT | 2 cut(s) | 193, 246 |
| BstC8I | GCNNGC | 1 cut(s) | 91 |
| BstDEI | CTNAG | 2 cut(s) | 207, 258 |
| BstF5I | GGATG | 1 cut(s) | 294 |
| BstNSI | RCATGY | 1 cut(s) | 93 |
| BsuRI | GGCC | 2 cut(s) | 128, 306 |
| BtsCI | GGATG | 1 cut(s) | 294 |
| Cac8I | GCNNGC | 1 cut(s) | 91 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| CviAII | CATG | 1 cut(s) | 90 |
| CviJI | RGCY | 3 cut(s) | 128, 276, 306 |
| CviKI_1 | RGCY | 3 cut(s) | 128, 276, 306 |
| DdeI | CTNAG | 2 cut(s) | 207, 258 |
| EaeI | YGGCCR | 1 cut(s) | 304 |
| Eco130I | CCWWGG | 1 cut(s) | 123 |
| EcoO109I | RGGNCCY | 1 cut(s) | 127 |
| EcoRI | GAATTC | 1 cut(s) | 335 |
| EcoT14I | CCWWGG | 1 cut(s) | 123 |
| EcoT22I | ATGCAT | 3 cut(s) | 58, 91, 150 |
| ErhI | CCWWGG | 1 cut(s) | 123 |
| FaeI | CATG | 1 cut(s) | 93 |
| FaiI | YATR | 6 cut(s) | 54, 91, 150, 253, 309, 324 |
| FatI | CATG | 1 cut(s) | 89 |
| FokI | GGATG | 1 cut(s) | 301 |
| FspBI | CTAG | 1 cut(s) | 340 |
| GsuI | CTGGAG | 1 cut(s) | 334 |
| HaeIII | GGCC | 2 cut(s) | 128, 306 |
| Hin1II | CATG | 1 cut(s) | 93 |
| HinfI | GANTC | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 2 cut(s) | 215, 313 |
| HpyAV | CCTTC | 2 cut(s) | 19, 325 |
| HpyCH4III | ACNGT | 2 cut(s) | 193, 246 |
| HpyCH4IV | ACGT | 1 cut(s) | 179 |
| HpyCH4V | TGCA | 5 cut(s) | 56, 89, 93, 148, 236 |
| HpyF3I | CTNAG | 2 cut(s) | 207, 258 |
| HpySE526I | ACGT | 1 cut(s) | 179 |
| Hsp92II | CATG | 1 cut(s) | 93 |
| LpnPI | CCDG | 6 cut(s) | 21, 74, 95, 228, 264, 298 |
| LweI | GCATC | 2 cut(s) | 135, 279 |
| MaeI | CTAG | 1 cut(s) | 340 |
| MaeII | ACGT | 1 cut(s) | 179 |
| MlsI | TGGCCA | 1 cut(s) | 306 |
| MluCI | AATT | 3 cut(s) | 135, 158, 335 |
| MluNI | TGGCCA | 1 cut(s) | 306 |
| MmeI | TCCRAC | 1 cut(s) | 10 |
| MnlI | CCTC | 1 cut(s) | 303 |
| Mox20I | TGGCCA | 1 cut(s) | 306 |
| Mph1103I | ATGCAT | 3 cut(s) | 58, 91, 150 |
| MroXI | GAANNNNTTC | 1 cut(s) | 335 |
| MscI | TGGCCA | 1 cut(s) | 306 |
| MseI | TTAA | 4 cut(s) | 138, 161, 176, 182 |
| Msp20I | TGGCCA | 1 cut(s) | 306 |
| Mva1269I | GAATGC | 2 cut(s) | 56, 91 |
| NlaIII | CATG | 1 cut(s) | 93 |
| NsiI | ATGCAT | 3 cut(s) | 58, 91, 150 |
| NspI | RCATGY | 1 cut(s) | 93 |
| PaeI | GCATGC | 1 cut(s) | 93 |
| PctI | GAATGC | 2 cut(s) | 56, 91 |
| PdmI | GAANNNNTTC | 1 cut(s) | 335 |
| PfeI | GAWTC | 1 cut(s) | 211 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 221 |
| Psp1406I | AACGTT | 1 cut(s) | 179 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| SaqAI | TTAA | 4 cut(s) | 138, 161, 176, 182 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| SetI | ASST | 3 cut(s) | 30, 182, 278 |
| SfaNI | GCATC | 2 cut(s) | 135, 279 |
| SphI | GCATGC | 1 cut(s) | 93 |
| Sse9I | AATT | 3 cut(s) | 135, 158, 335 |
| SspMI | CTAG | 1 cut(s) | 340 |
| StyI | CCWWGG | 1 cut(s) | 123 |
| TaaI | ACNGT | 2 cut(s) | 193, 246 |
| TaiI | ACGT | 1 cut(s) | 182 |
| TasI | AATT | 3 cut(s) | 135, 158, 335 |
| TfiI | GAWTC | 1 cut(s) | 211 |
| Tru1I | TTAA | 4 cut(s) | 138, 161, 176, 182 |
| Tru9I | TTAA | 4 cut(s) | 138, 161, 176, 182 |
| TspDTI | ATGAA | 4 cut(s) | 111, 117, 170, 190 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 221 |
| XapI | RAATTY | 1 cut(s) | 335 |
| XceI | RCATGY | 1 cut(s) | 93 |
| XmnI | GAANNNNTTC | 1 cut(s) | 335 |
| XspI | CTAG | 1 cut(s) | 340 |
| Zsp2I | ATGCAT | 3 cut(s) | 58, 91, 150 |