pycom16g19450
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
16527707 .. 16529528
1822 bp
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UTR
Exon/CDS
Intron
pycom16g19450.2

Sequence Viewer

Length: 528 bp
ATGTTCTCATATATCAATGTACAGATTTTTAATAGCCTTCTTTTTCGTCGAGAGTGCTGCACCTTCAACAATGGCCAATATGTGAAGAATGGGCTAGCTGAATTGGAGCTATGGTGTAACCTAGCAAAAGAAGAGTATGCTGGCTCATCATGGGATGAACTCAAATATATTAGGCAGGCTGTAGGATTCTTGGTTCTACACCAAAAGTCCAGAATCTCCTATGATGAACTAACAAATGACCTATGCCCTGCATTGAGTGTTCAACAACTTCATAGAGTATGCACACTATTTTTGGATGACGATTGCAACACTCAAAGTGTTGGCCCTGATGTCATTTCCAGCATGAACTTTCTAATGACAGATGAATCCAGTGGTGACGATAGCAGCTCCTTTTTGCTGGATGACAATTCCAGCCTTCCTTTCTCAATTGAAGATATATCTGGTTCCATGCAAGACCAGAGCTATTCAGATGTAAAACCTCCTGCAGAGCTTTTGGAGAATCCAGACTTCCACTTTTTACAGGAGTAA

Protein Analysis

176

Amino Acids

19.9

Weight (kDa)

4.2

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 73
AfaI GTAC 1 cut(s) 21
AgsI TTSAA 3 cut(s) 67, 263, 431
AloI GAACNNNNNNTCC 2 cut(s) 177, 209
AluBI AGCT 5 cut(s) 98, 109, 387, 462, 490
AluI AGCT 5 cut(s) 98, 109, 387, 462, 490
AoxI GGCC 2 cut(s) 73, 322
ApeKI GCWGC 2 cut(s) 57, 384
AspS9I GGNCC 1 cut(s) 323
AsuHPI GGTGA 1 cut(s) 386
AsuNHI GCTAGC 1 cut(s) 94
BalI TGGCCA 1 cut(s) 75
BbvI GCAGC 2 cut(s) 44, 396
BcgI CGANNNNNNTGC 2 cut(s) 39, 73
BfaI CTAG 2 cut(s) 95, 122
BfmI CTRYAG 2 cut(s) 180, 483
BisI GCNGC 2 cut(s) 58, 385
BlsI GCNGC 2 cut(s) 59, 386
BmgT120I GGNCC 1 cut(s) 323
BmiI GGNNCC 1 cut(s) 445
BmtI GCTAGC 1 cut(s) 98
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bse1I ACTGG 1 cut(s) 369
BseGI GGATG 3 cut(s) 160, 301, 406
BseNI ACTGG 1 cut(s) 369
BseXI GCAGC 2 cut(s) 44, 396
BsgI GTGCAG 1 cut(s) 43
BshFI GGCC 2 cut(s) 75, 324
BsnI GGCC 2 cut(s) 75, 324
Bsp1407I TGTACA 1 cut(s) 19
BspANI GGCC 2 cut(s) 75, 324
BspLI GGNNCC 1 cut(s) 445
BspMAI CTGCAG 1 cut(s) 487
BspOI GCTAGC 1 cut(s) 98
BsrGI TGTACA 1 cut(s) 19
BsrI ACTGG 1 cut(s) 369
Bst6I CTCTTC 1 cut(s) 126
BstAUI TGTACA 1 cut(s) 19
BstC8I GCNNGC 3 cut(s) 96, 142, 177
BstF5I GGATG 3 cut(s) 160, 301, 406
BstSFI CTRYAG 2 cut(s) 180, 483
BstV1I GCAGC 2 cut(s) 44, 396
BsuRI GGCC 2 cut(s) 75, 324
BtsCI GGATG 3 cut(s) 160, 301, 406
BtsIMutI CAGTG 1 cut(s) 376
Cac8I GCNNGC 3 cut(s) 96, 142, 177
Cfr13I GGNCC 1 cut(s) 323
Csp6I GTAC 1 cut(s) 20
CviAII CATG 3 cut(s) 150, 343, 448
CviQI GTAC 1 cut(s) 20
EaeI YGGCCR 1 cut(s) 73
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
FaeI CATG 3 cut(s) 153, 346, 451
FatI CATG 3 cut(s) 149, 342, 447
Fnu4HI GCNGC 2 cut(s) 58, 385
FokI GGATG 3 cut(s) 167, 308, 413
Fsp4HI GCNGC 2 cut(s) 58, 385
FspBI CTAG 2 cut(s) 95, 122
GluI GCNGC 2 cut(s) 58, 385
HaeIII GGCC 2 cut(s) 75, 324
Hin1II CATG 3 cut(s) 153, 346, 451
HinfI GANTC 4 cut(s) 186, 213, 365, 499
HphI GGTGA 1 cut(s) 386
Hpy188I TCNGA 1 cut(s) 469
Hpy188III TCNNGA 3 cut(s) 50, 210, 503
Hpy99I CGWCG 1 cut(s) 51
HpyAV CCTTC 3 cut(s) 47, 73, 425
HpyCH4V TGCA 6 cut(s) 60, 251, 282, 306, 451, 485
Hsp92II CATG 3 cut(s) 153, 346, 451
LmnI GCTCC 2 cut(s) 106, 392
Lsp1109I GCAGC 2 cut(s) 44, 396
MaeI CTAG 2 cut(s) 95, 122
MaeIII GTNAC 2 cut(s) 116, 374
MboII GAAGA 3 cut(s) 97, 143, 443
MfeI CAATTG 1 cut(s) 426
MlsI TGGCCA 1 cut(s) 75
MluCI AATT 3 cut(s) 101, 406, 426
MluNI TGGCCA 1 cut(s) 75
MnlI CCTC 1 cut(s) 489
Mox20I TGGCCA 1 cut(s) 75
MscI TGGCCA 1 cut(s) 75
MseI TTAA 1 cut(s) 30
Msp20I TGGCCA 1 cut(s) 75
MunI CAATTG 1 cut(s) 426
NheI GCTAGC 1 cut(s) 94
NlaIII CATG 3 cut(s) 153, 346, 451
NlaIV GGNNCC 1 cut(s) 445
NmuCI GTSAC 1 cut(s) 374
PfeI GAWTC 4 cut(s) 186, 213, 365, 499
PkrI GCNGC 2 cut(s) 59, 386
PspN4I GGNNCC 1 cut(s) 445
PspPI GGNCC 1 cut(s) 323
PstI CTGCAG 1 cut(s) 487
RsaI GTAC 1 cut(s) 21
RsaNI GTAC 1 cut(s) 20
SaqAI TTAA 1 cut(s) 30
SatI GCNGC 2 cut(s) 58, 385
Sau96I GGNCC 1 cut(s) 323
SetI ASST 9 cut(s) 65, 100, 111, 123, 243, 389, 464, 481, 492
SfcI CTRYAG 2 cut(s) 180, 483
Sse9I AATT 3 cut(s) 101, 406, 426
SspMI CTAG 2 cut(s) 95, 122
TaqI TCGA 1 cut(s) 49
TasI AATT 3 cut(s) 101, 406, 426
TatI WGTACW 1 cut(s) 19
TfiI GAWTC 4 cut(s) 186, 213, 365, 499
Tru1I TTAA 1 cut(s) 30
Tru9I TTAA 1 cut(s) 30
TscAI CASTG 1 cut(s) 376
TseFI GTSAC 1 cut(s) 374
TseI GCWGC 2 cut(s) 57, 384
Tsp45I GTSAC 1 cut(s) 374
TspDTI ATGAA 5 cut(s) 171, 240, 260, 359, 378
TspRI CASTG 1 cut(s) 376
XspI CTAG 2 cut(s) 95, 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.