Prupe.6G097500_v2.0.a1

Cytochrome B561, N terminal

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
6783946 .. 6787803
3858 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G097500.1

Sequence Viewer

Length: 2007 bp
ATGGAATCAAGAGACAAAGCCTCGCCTCCACCAAAGCCCGCCAAGTTCTCAGTGTACCAGAACCCATCCTTGTCCGCCGCCCTCACCGCCAATAGCCTCCGGCCTTCGAAGCATGCACTCCTCTGTATCTTCTTTCTCTCCTCCGCCTCCGCCGTCGCCTTCATGGCCATGTTTTCCAGGGAAAATGGGATTATTGACAATTTGAAGCTCAAAAATCTTTCCCAAGAGGCAGCCTATTTGTTTTCCAAAGCAATACAGACCTTCATGGGCTTGATATTTTTGGGTACTCTATTTGCACTATTTAGAGCCATCTCACTGAGAAATGCCGCACCCTCAAAAGGAAATAGTGACAAACCATGCCTTACAAATCGTCAACTAGGACTTTTGGGAATTAAGCCAAAGGTTGAGCAAGTCGTATCAGAGTCTTCAAAGAAACCTCCCAAGTCTAAACCCCACATGTCTTCCCCTTCGGATGTACTTGTTCCACTTCATCAGCCAATCACCAGTTCAAATCGTTTGTCTCGAATCAGCGCGAATAAGTCAAACATCAGTGGAGGAACTAAGATGGGATCTATCAGTAGCCCTTCTAAATCACCCGGTTCTACATCTTCTTTGTATCTTGTGTCGGGAGGTGTTTCACCACTCTCTTCTGTTCAGAATTCTCCTGGAGTAGATTCAGCGGTCTCCACCCCTTGGTCAAGCAAGCGAGCATCTACAAGAGAGATAATGTCAGAAGAAAAGTTTGAAAGGTTCTTGGCAGAGGTGGATGAAAAAATCACAGAATCAGCGGGGAAACTGGCAACTCCACCACCCACCATTAGAGGCTTTGGTGCAGCCAGTCCAAGTTCAGCTAACACATCTGGAACTACTAGGAGTACACCATTGAGGCCTGTGAGGATGTCTCCAGGTTCTCAGAAGTTCACAACTCCCCCAAAGAAAGGAGAGGGCGAGCTTCCTCCACCTATGTCCATGGAAGAATCTATTCATGCATTTGAGCGTTTGGGCATCTATCCTCAAATTGAGCAGTGGCGTGACAGCCTCAGGCAATGGTTTTCTTCGGTTTTGCTTAATCCTCTACTTGACAAGATTGAAACCAGTCATATTCAGGTAATCCAAGCAGCTGCCAAACTTGGGATGTCAATTTCAATTAGTCAAGTTGGAAGTGATTTACCAACTGCTAGAACTGCTACAGTGTCTTCAAATGATAGGACTAAGGAATGGCAGCCAACATTAACTCTTGATGAAGATGGACTTATGCATCAATTACGAGCTACTCTCGTCCAGGCTATTGATGCTTCGGCCTCCAAGCTGCCTCAAGCCAATCTGCAACAAACCCCACAGCAGAATCCGTTGGTCCCTATTATGCAGGAGTGTGTGGATGCAATCACTGAACACCAGAGGCTTCATGCATTGATGAAGGGAGAGTTAGTTAAAGGTCTTCTACCGCAAAGCAGCATTCGAGCAGAATATACAGTACAAAGGATTCGAGAGCTTGCTGAAGGAACCTGTTTGAAGAATTATGAATATCTTGGAAGTGGAGAAGTATATGATAAAAAGCACAATAAGTGGACTCTTGAGCTGCCAACTGATTCTCACTTGCTCTTGTATTTGTTCTGTGCTTTCCTGGAGCATCCAAAGTGGATGTTGCATGTGGATCCTGCATCCTATGCTGAAGCTCGTTCTAGCAAAAATCCCCTATTCTTGGGAGTCCTACCTCCAAAAGAAAGGTTTCCTGAGAAGTACATAGCTGTCGTATCTGGTGTCCCTTCTGCTCTCCACCCTGGAGCGTCTGTACTTGTTGTTGGAAGGCAAAGCCCCCCAGTTTTTGCCTTGTATTGGGATAAGAAATTGCAGTTTTCTCTTCAGGGAATGACGGCACTGTGGGATTCGATTTTGCTTCTGTGCCACAGGATTAAGGTTGAATATGGGGGGATTGTTCGGGGAATGCATCTTAGTTCTTCAGCCCTGAGCATCCTCCCTGTTCTGGAATCAGAAGCTGAGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

669

Amino Acids

72.9

Weight (kDa)

9.29

Isoelectric Point (pI)

52.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016195)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 693
AccII CGCG 1 cut(s) 533
AclWI GGATC 3 cut(s) 577, 1649, 1662
AcoI YGGCCR 1 cut(s) 165
AcsI RAATTY 1 cut(s) 658
AcuI CTGAAG 4 cut(s) 1518, 1692, 1847, 1944
AfaI GTAC 7 cut(s) 56, 286, 477, 877, 1476, 1742, 1794
AfiI CCNNNNNNNGG 7 cut(s) 338, 693, 938, 1131, 1702, 1836, 1984
AflIII ACRYGT 1 cut(s) 456
AgsI TTSAA 9 cut(s) 205, 429, 510, 746, 1091, 1146, 1200, 1513, 1922
AjnI CCWGG 6 cut(s) 176, 664, 904, 1281, 1623, 1780
AjuI GAANNNNNNNTTGG 2 cut(s) 490, 522
Alw26I GTCTC 4 cut(s) 6, 525, 688, 906
AlwI GGATC 3 cut(s) 577, 1649, 1662
AlwNI CAGNNNCTG 1 cut(s) 1997
AoxI GGCC 4 cut(s) 101, 165, 887, 1299
ApeKI GCWGC 8 cut(s) 230, 833, 1118, 1121, 1222, 1309, 1452, 1579
ApoI RAATTY 1 cut(s) 658
ArsI GACNNNNNNTTYG 2 cut(s) 503, 535
Asp700I GAANNNNTTC 2 cut(s) 981, 1728
AspLEI GCGC 1 cut(s) 533
AspS9I GGNCC 1 cut(s) 1354
AsuC2I CCSGG 1 cut(s) 597
AsuHPI GGTGA 4 cut(s) 76, 493, 585, 630
AsuII TTCGAA 1 cut(s) 107
AvaII GGWCC 1 cut(s) 1354
AxyI CCTNAGG 1 cut(s) 1040
BalI TGGCCA 1 cut(s) 167
BamHI GGATCC 1 cut(s) 1654
BbsI GAAGAC 4 cut(s) 417, 453, 1188, 1430
BbvCI CCTCAGC 1 cut(s) 1998
BbvI GCAGC 8 cut(s) 242, 845, 1108, 1130, 1234, 1296, 1464, 1566
BccI CCATC 4 cut(s) 73, 317, 559, 1241
BceAI ACGGC 2 cut(s) 137, 1890
BciT130I CCWGG 6 cut(s) 178, 666, 906, 1283, 1625, 1782
BcnI CCSGG 1 cut(s) 597
BcoDI GTCTC 4 cut(s) 6, 525, 688, 906
BfaI CTAG 4 cut(s) 377, 870, 1179, 1683
BfmI CTRYAG 1 cut(s) 1188
BglI GCCNNNNNGGC 1 cut(s) 164
Bme1390I CCNGG 7 cut(s) 178, 597, 666, 906, 1283, 1625, 1782
Bme18I GGWCC 1 cut(s) 1354
BmgT120I GGNCC 1 cut(s) 1354
BmiI GGNNCC 3 cut(s) 1356, 1504, 1656
BmrFI CCNGG 7 cut(s) 178, 597, 666, 906, 1283, 1625, 1782
BmrI ACTGGG 1 cut(s) 1814
BmsI GCATC 9 cut(s) 719, 1014, 1267, 1282, 1369, 1639, 1670, 1957, 1980
BmuI ACTGGG 1 cut(s) 1814
BpiI GAAGAC 4 cut(s) 417, 453, 1188, 1430
BplI GAGNNNNNCTC 4 cut(s) 886, 918, 1260, 1292
BpmI CTGGAG 4 cut(s) 687, 888, 1646, 1803
Bpu10I CCTNAGC 2 cut(s) 1967, 1998
Bpu14I TTCGAA 1 cut(s) 107
BpuEI CTTGAG 2 cut(s) 1299, 1595
BpuMI CCSGG 1 cut(s) 597
BsaI GGTCTC 1 cut(s) 688
BsaJI CCNNGG 4 cut(s) 177, 692, 969, 1780
BsaXI ACNNNNNCTCC 4 cut(s) 1413, 1443, 1776, 1806
Bsc4I CCNNNNNNNGG 7 cut(s) 338, 693, 938, 1131, 1702, 1836, 1984
Bse1I ACTGG 5 cut(s) 504, 801, 837, 1095, 1820
Bse21I CCTNAGG 1 cut(s) 1040
Bse3DI GCAATG 1 cut(s) 1052
BseBI CCWGG 6 cut(s) 178, 666, 906, 1283, 1625, 1782
BseDI CCNNGG 4 cut(s) 177, 692, 969, 1780
BseLI CCNNNNNNNGG 7 cut(s) 338, 693, 938, 1131, 1702, 1836, 1984
BseMI GCAATG 1 cut(s) 1052
BseMII CTCAG 7 cut(s) 63, 308, 926, 1054, 1725, 1958, 1989
BseNI ACTGG 5 cut(s) 504, 801, 837, 1095, 1820
BseRI GAGGAG 2 cut(s) 110, 130
BseXI GCAGC 8 cut(s) 242, 845, 1108, 1130, 1234, 1296, 1464, 1566
BsgI GTGCAG 1 cut(s) 852
Bsh1236I CGCG 1 cut(s) 533
BshFI GGCC 4 cut(s) 103, 167, 889, 1301
BsiSI CCGG 2 cut(s) 100, 597
BslFI GGGAC 2 cut(s) 1340, 1748
BslI CCNNNNNNNGG 7 cut(s) 338, 693, 938, 1131, 1702, 1836, 1984
BsmAI GTCTC 4 cut(s) 6, 525, 688, 906
BsmFI GGGAC 2 cut(s) 1340, 1748
BsmI GAATGC 2 cut(s) 1455, 1950
BsnI GGCC 4 cut(s) 103, 167, 889, 1301
Bso31I GGTCTC 1 cut(s) 688
Bsp119I TTCGAA 1 cut(s) 107
Bsp143I GATC 2 cut(s) 569, 1654
Bsp19I CCATGG 1 cut(s) 969
BspANI GGCC 4 cut(s) 103, 167, 889, 1301
BspCNI CTCAG 7 cut(s) 62, 309, 925, 1053, 1726, 1959, 1990
BspFNI CGCG 1 cut(s) 533
BspLI GGNNCC 3 cut(s) 1356, 1504, 1656
BspPI GGATC 3 cut(s) 577, 1649, 1662
BspT104I TTCGAA 1 cut(s) 107
BspTNI GGTCTC 1 cut(s) 688
BsrDI GCAATG 1 cut(s) 1052
BsrI ACTGG 5 cut(s) 504, 801, 837, 1095, 1820
BssECI CCNNGG 4 cut(s) 177, 692, 969, 1780
BssMI GATC 2 cut(s) 569, 1654
BssT1I CCWWGG 2 cut(s) 692, 969
Bst2UI CCWGG 6 cut(s) 178, 666, 906, 1283, 1625, 1782
Bst4CI ACNGT 3 cut(s) 1192, 1474, 1881
Bst6I CTCTTC 2 cut(s) 652, 1866
BstAPI GCANNNNNTGC 1 cut(s) 1667
BstBI TTCGAA 1 cut(s) 107
BstC8I GCNNGC 6 cut(s) 39, 114, 704, 708, 950, 1494
BstDSI CCRYGG 1 cut(s) 969
BstFNI CGCG 1 cut(s) 533
BstHHI GCGC 1 cut(s) 533
BstKTI GATC 2 cut(s) 572, 1657
BstMAI GTCTC 4 cut(s) 6, 525, 688, 906
BstMBI GATC 2 cut(s) 569, 1654
BstMWI GCNNNNNNNGC 6 cut(s) 86, 109, 164, 1184, 1292, 1667
BstNI CCWGG 6 cut(s) 178, 666, 906, 1283, 1625, 1782
BstNSI RCATGY 3 cut(s) 116, 460, 1652
BstSCI CCNGG 7 cut(s) 176, 595, 664, 904, 1281, 1623, 1780
BstSFI CTRYAG 1 cut(s) 1188
BstUI CGCG 1 cut(s) 533
BstV1I GCAGC 8 cut(s) 242, 845, 1108, 1130, 1234, 1296, 1464, 1566
BstV2I GAAGAC 4 cut(s) 417, 453, 1188, 1430
BstX2I RGATCY 2 cut(s) 569, 1654
BstYI RGATCY 2 cut(s) 569, 1654
Bsu36I CCTNAGG 1 cut(s) 1040
BsuRI GGCC 4 cut(s) 103, 167, 889, 1301
BtgI CCRYGG 1 cut(s) 969
BtsI GCAGTG 1 cut(s) 1031
BtsIMutI CAGTG 7 cut(s) 57, 314, 556, 1031, 1197, 1386, 1877
Cac8I GCNNGC 6 cut(s) 39, 114, 704, 708, 950, 1494
CaiI CAGNNNCTG 1 cut(s) 1997
CfoI GCGC 1 cut(s) 533
Cfr13I GGNCC 1 cut(s) 1354
CseI GACGC 1 cut(s) 1776
Csp6I GTAC 7 cut(s) 55, 285, 476, 876, 1475, 1741, 1793
CviQI GTAC 7 cut(s) 55, 285, 476, 876, 1475, 1741, 1793
DpnI GATC 2 cut(s) 571, 1656
DpnII GATC 2 cut(s) 569, 1654
EaeI YGGCCR 1 cut(s) 165
Eam1104I CTCTTC 2 cut(s) 652, 1866
EarI CTCTTC 2 cut(s) 652, 1866
EciI GGCGGA 3 cut(s) 64, 133, 139
Eco130I CCWWGG 2 cut(s) 692, 969
Eco147I AGGCCT 1 cut(s) 889
Eco31I GGTCTC 1 cut(s) 688
Eco47I GGWCC 1 cut(s) 1354
Eco57I CTGAAG 4 cut(s) 1518, 1692, 1847, 1944
Eco81I CCTNAGG 1 cut(s) 1040
EcoRI GAATTC 1 cut(s) 658
EcoRII CCWGG 6 cut(s) 176, 664, 904, 1281, 1623, 1780
EcoT14I CCWWGG 2 cut(s) 692, 969
EcoT22I ATGCAT 4 cut(s) 991, 1260, 1411, 1950
ErhI CCWWGG 2 cut(s) 692, 969
FalI AAGNNNNNCTT 2 cut(s) 1236, 1268
FaqI GGGAC 2 cut(s) 1340, 1748
FauI CCCGC 2 cut(s) 46, 781
FspBI CTAG 4 cut(s) 377, 870, 1179, 1683
GlaI GCGC 1 cut(s) 532
GsuI CTGGAG 4 cut(s) 687, 888, 1646, 1803
HaeIII GGCC 4 cut(s) 103, 167, 889, 1301
HapII CCGG 2 cut(s) 100, 597
HgaI GACGC 1 cut(s) 1776
HhaI GCGC 1 cut(s) 533
Hin6I GCGC 1 cut(s) 531
HinP1I GCGC 1 cut(s) 531
HincII GTYRAC 1 cut(s) 374
HindII GTYRAC 1 cut(s) 374
HpaII CCGG 2 cut(s) 100, 597
HphI GGTGA 4 cut(s) 76, 493, 585, 630
Hpy166II GTNNAC 5 cut(s) 55, 374, 878, 921, 1569
Hpy188I TCNGA 6 cut(s) 421, 472, 657, 733, 915, 1993
Hpy188III TCNNGA 9 cut(s) 9, 522, 627, 861, 1238, 1487, 1574, 1733, 1985
Hpy8I GTNNAC 5 cut(s) 55, 374, 878, 921, 1569
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 9 cut(s) 114, 169, 271, 477, 594, 1411, 1493, 1776, 1800
HpyCH4III ACNGT 3 cut(s) 1192, 1474, 1881
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 109, 164, 1184, 1292, 1667
HspAI GCGC 1 cut(s) 531
Kzo9I GATC 2 cut(s) 569, 1654
LmnI GCTCC 2 cut(s) 1627, 1784
Lsp1109I GCAGC 8 cut(s) 242, 845, 1108, 1130, 1234, 1296, 1464, 1566
LweI GCATC 9 cut(s) 719, 1014, 1267, 1282, 1369, 1639, 1670, 1957, 1980
MaeI CTAG 4 cut(s) 377, 870, 1179, 1683
MaeIII GTNAC 2 cut(s) 347, 1031
MalI GATC 2 cut(s) 571, 1656
MboI GATC 2 cut(s) 569, 1654
MflI RGATCY 2 cut(s) 569, 1654
MlsI TGGCCA 1 cut(s) 167
MluCI AATT 9 cut(s) 199, 390, 658, 1017, 1140, 1146, 1262, 1516, 1847
MluNI TGGCCA 1 cut(s) 167
MlyI GAGTC 3 cut(s) 431, 1564, 1716
MmeI TCCRAC 2 cut(s) 1138, 1783
Mox20I TGGCCA 1 cut(s) 167
Mph1103I ATGCAT 4 cut(s) 991, 1260, 1411, 1950
MroXI GAANNNNTTC 2 cut(s) 981, 1728
MscI TGGCCA 1 cut(s) 167
MseI TTAA 5 cut(s) 393, 1068, 1232, 1431, 1914
MslI CAYNNNNRTG 1 cut(s) 167
Msp20I TGGCCA 1 cut(s) 167
MspA1I CMGCKG 3 cut(s) 680, 788, 1121
MspI CCGG 2 cut(s) 100, 597
MspR9I CCNGG 7 cut(s) 178, 597, 666, 906, 1283, 1625, 1782
Mva1269I GAATGC 2 cut(s) 1455, 1950
MvaI CCWGG 6 cut(s) 178, 666, 906, 1283, 1625, 1782
MvnI CGCG 1 cut(s) 533
MwoI GCNNNNNNNGC 6 cut(s) 86, 109, 164, 1184, 1292, 1667
NciI CCSGG 1 cut(s) 597
NcoI CCATGG 1 cut(s) 969
NdeII GATC 2 cut(s) 569, 1654
NlaIV GGNNCC 3 cut(s) 1356, 1504, 1656
NmuCI GTSAC 2 cut(s) 347, 1031
NsiI ATGCAT 4 cut(s) 991, 1260, 1411, 1950
NspI RCATGY 3 cut(s) 116, 460, 1652
NspV TTCGAA 1 cut(s) 107
PaeI GCATGC 1 cut(s) 116
PceI AGGCCT 1 cut(s) 889
PciI ACATGT 1 cut(s) 456
PcsI WCGNNNNNNNCGW 1 cut(s) 520
PctI GAATGC 2 cut(s) 1455, 1950
PdmI GAANNNNTTC 2 cut(s) 981, 1728
PflMI CCANNNNNTGG 1 cut(s) 693
PfoI TCCNGGA 2 cut(s) 664, 1623
PleI GAGTC 3 cut(s) 430, 1564, 1715
PpsI GAGTC 3 cut(s) 430, 1564, 1715
PscI ACATGT 1 cut(s) 456
Psp6I CCWGG 6 cut(s) 176, 664, 904, 1281, 1623, 1780
PspGI CCWGG 6 cut(s) 176, 664, 904, 1281, 1623, 1780
PspN4I GGNNCC 3 cut(s) 1356, 1504, 1656
PspPI GGNCC 1 cut(s) 1354
PstNI CAGNNNCTG 1 cut(s) 1997
PsuI RGATCY 2 cut(s) 569, 1654
PvuII CAGCTG 1 cut(s) 1121
RsaI GTAC 7 cut(s) 56, 286, 477, 877, 1476, 1742, 1794
RsaNI GTAC 7 cut(s) 55, 285, 476, 876, 1475, 1741, 1793
RseI CAYNNNNRTG 1 cut(s) 167
SaqAI TTAA 5 cut(s) 393, 1068, 1232, 1431, 1914
Sau3AI GATC 2 cut(s) 569, 1654
Sau96I GGNCC 1 cut(s) 1354
SchI GAGTC 3 cut(s) 431, 1564, 1716
ScrFI CCNGG 7 cut(s) 178, 597, 666, 906, 1283, 1625, 1782
SfaNI GCATC 9 cut(s) 719, 1014, 1267, 1282, 1369, 1639, 1670, 1957, 1980
SfcI CTRYAG 1 cut(s) 1188
SfuI TTCGAA 1 cut(s) 107
SinI GGWCC 1 cut(s) 1354
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 2 cut(s) 1314, 1574
SmoI CTYRAG 2 cut(s) 1314, 1574
SphI GCATGC 1 cut(s) 116
Sse9I AATT 9 cut(s) 199, 390, 658, 1017, 1140, 1146, 1262, 1516, 1847
SseBI AGGCCT 1 cut(s) 889
SspMI CTAG 4 cut(s) 377, 870, 1179, 1683
StuI AGGCCT 1 cut(s) 889
StyD4I CCNGG 7 cut(s) 176, 595, 664, 904, 1281, 1623, 1780
StyI CCWWGG 2 cut(s) 692, 969
TaaI ACNGT 3 cut(s) 1192, 1474, 1881
TaqI TCGA 5 cut(s) 107, 523, 1459, 1486, 1889
TasI AATT 9 cut(s) 199, 390, 658, 1017, 1140, 1146, 1262, 1516, 1847
TatI WGTACW 5 cut(s) 475, 875, 1474, 1740, 1792
TauI GCSGC 2 cut(s) 80, 329
Tru1I TTAA 5 cut(s) 393, 1068, 1232, 1431, 1914
Tru9I TTAA 5 cut(s) 393, 1068, 1232, 1431, 1914
TscAI CASTG 7 cut(s) 57, 321, 556, 1031, 1197, 1393, 1884
TseFI GTSAC 2 cut(s) 347, 1031
TseI GCWGC 8 cut(s) 230, 833, 1118, 1121, 1222, 1309, 1452, 1579
Tsp45I GTSAC 2 cut(s) 347, 1031
TspDTI ATGAA 9 cut(s) 151, 253, 479, 783, 974, 1257, 1394, 1430, 1536
TspGWI ACGGA 1 cut(s) 1338
TspRI CASTG 7 cut(s) 57, 321, 556, 1031, 1197, 1393, 1884
Van91I CCANNNNNTGG 1 cut(s) 693
VpaK11BI GGWCC 1 cut(s) 1354
XapI RAATTY 1 cut(s) 658
XceI RCATGY 3 cut(s) 116, 460, 1652
XmnI GAANNNNTTC 2 cut(s) 981, 1728
XspI CTAG 4 cut(s) 377, 870, 1179, 1683
Zsp2I ATGCAT 4 cut(s) 991, 1260, 1411, 1950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.