Rroxscaffold_1G00020590

Cytochrome B561, N terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0016195
Physical Location & Seq
Reverse (-)
24980965 .. 24985077
4113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00020590.1

Sequence Viewer

Length: 2037 bp
ATGGAGGGCAGAGACAACAAGGGCTCCTCGCCCCCACCGAAGCCATCCAAGTTCTCGGTCTACCAGAACCCAACCCTCTCCGCCGCCCTCACCGCCAGCAGCCTCCGACCTCCCAAGCACGCCCTCCTCGTCATCTTCTCTCTCTCCACCCTCTCCGCCGTCGCCTTCCTCGTCATTCTCTCCAGGGAGAATGAGTTTGTTAACAATTTGAAGCTCAATATTCTTTCCCAAGAGGCAGCCTATCTGTTTGTTAAAGTGGTACATACTGTTGTGGGATTAGTATTTTTGGCTACTCTAGTTGCACTCTTCAGAGTCATCTCATTGAGAAATGCCGATGTTGTGCCAACTGTATCTTCCTCCAAAGGAACCAAGGATAAGATGGGCTTGACAAGTCGTCAGCTTGGACTTCTAGGAATTAAGCCAAAGGTTGAACAAGTTGTATCCGAGTCTGCAAAGAAACCTCCCAAGTCCAAGCCCTACTTGTCTTCCCCTTCAGATGTCCTTGTTCCACTTCATCAGCCAATCAGCAGTTCAAATCGTCTGTCTCGAATTGGCTCAGATAAATTTAACACCAGTGGTGGAAATAAGATGGGATCCATCACCAGTCCTTCTAAATCACCCAGTTCCGCGTCTTCTTTGTATCTTGTCCCAGGAGCTGTTTCACCAATGCCGTCTGTTCATAATTCACCTGGAGTGGATTCAGTGGTCTCTTCTCCTTGGTCAAGTAAGCGAGCCCCTGGAAGAGAGATAACGTCGGAAGAAAAGTTTGAACAGTTCTTGGCAGATGTTGATGAGAAAATCACACAATCAGCCGGAAAACTGGCAACTCCACCACCCACTATCAGAGGCTTCGGTGTAGCCAGTCCCGGTTCAGCTAATACATCTGGAACTACAAGGAGTACACCACTGAGGCCTGTGAGAATGTCTCCAGGTTCCCAGAAGTTCAGCACTCCCCCAAAGAAAGGGGAAGGTGAGCTTCCTCCACCCATGTCCATGGAAGAATCTATTAATGCATTTGATCGTTTGGGCATCTATCCTCAAATTGAGCAGTGGCGTGACAGCCTCAGGCAATGGTTTTCTTCAGTTTTGCTTAATCCCCTACTCCGAAAGATTGAGAGCAGTCATATTCAGGTAATGGAAGCAGCTTCCAAACTTGGGATATCACTCACAATTAGTCAAATTGGAAGTGATTTACCAACTACTGGAACTACTTCAGTGTCTTCAACTGACAGGACTAAGGAATGGCAACAAACACTAACTCTTGATGAAGATGGAGTTATGCATCAAGTACGAGCTACTCTCCTCCAGTATATTAATGCTTCCACCTCACAGCTGCCTCAAGCAAATCTCCAACAAACCCCACAGCAGAATATGGTGCCTATTATGCAGGAGTGTGTCGATGTGATCACTGAACACCAGAGGCTACATGCATTGATGAAGGGAGAGTTAATTAAAGGTTTGCTACCGCAAAGCAGCATTCGAGCAGAATACACAGTACAAAGGATTCGAGAGCTTGCTGAAGGAACCTGCTTGAAGAACTATGAATATCTTGGAAGTGGAGAGGTATATGATAAAAAGAACAAGAAGTGGACTGTTGAACTCCCAACCGATTCTCACCTGCTCTTGTATTTGTTCTGTGCTTTCCTCGAGCACCCAAAGTGGATGCTGCATGGGGATTCTATATCTCATGCTGGAGCGCGATCTAGCAAAAATCCCCTCTTCTTGGGAGTCCTACCACAAAAAGAAAGTATTCCTGAGAAGTACATAGCAGTTGTATCAGGTGTCCCTTCTGCTCTCCACCCAGGGGGCTGCGTTCTTGTTGTTGGACGGAAGAGCCCCCAGTTTTCGCCTTGTATTTGGATAAGAAATTGCAATTTTCTCTTCAGTTCTGCAGTTGGAATGACTGCACTGTGGGATTCTATATTGCTTCTTTGCCACAGCATTAAGGCTGGATATGGGGGAATTGTCCGTGGCATTCATCTTAGTTCTTCACCCCTGAGAATCCTCCCTGTTCTTGATTCGGAAACTGAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CytochromB561_N

Protein Analysis

678

Amino Acids

73.62

Weight (kDa)

9.36

Isoelectric Point (pI)

52.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CytochromB561_N PF09786 17 - 673 5.9e-203 Cytochrome B561, N terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016195)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07970
fragaria_vesca FvH4_3g32920
prunus_persica Prupe.6G097500_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0060051
rosa_laevigata RLG00000035342
rosa_multiflora Rmu_sc0000493.1_g000021 Rmu_sc0000493.1_g000024 Rmu_sc0003366.1_g000027
rosa_roxburghii Rroxscaffold_1G00020590
rosa_rugosa Rorug05G0327900
rosa_samantha Rh5AG391700 Rh5BG404400 Rh5CG428000 Rh5DG419900
rosa_wichuraiana Rw5G036910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1626
Acc36I ACCTGC 2 cut(s) 1535, 1626
AccB1I GGYRCC 1 cut(s) 1375
AccB7I CCANNNNNTGG 1 cut(s) 1202
AccI GTMKAC 1 cut(s) 60
AccII CGCG 2 cut(s) 629, 1699
AciI CCGC 6 cut(s) 81, 84, 93, 156, 627, 1466
AclWI GGATC 2 cut(s) 588, 601
AcsI RAATTY 1 cut(s) 563
AcuI CTGAAG 6 cut(s) 292, 477, 1065, 1197, 1539, 1867
AfaI GTAC 5 cut(s) 261, 901, 1290, 1497, 1763
AfiI CCNNNNNNNGG 5 cut(s) 962, 1155, 1202, 1723, 1804
AgsI TTSAA 7 cut(s) 211, 431, 534, 770, 1224, 1534, 1598
AhdI GACNNNNNGTC 1 cut(s) 393
AjnI CCWGG 6 cut(s) 182, 649, 688, 736, 928, 1801
AjuI GAANNNNNNNTTGG 4 cut(s) 337, 369, 514, 546
AluBI AGCT 9 cut(s) 214, 400, 656, 875, 976, 1145, 1295, 1333, 1513
AluI AGCT 9 cut(s) 214, 400, 656, 875, 976, 1145, 1295, 1333, 1513
Alw21I GWGCWC 1 cut(s) 1653
Alw26I GTCTC 4 cut(s) 6, 549, 712, 930
AlwI GGATC 2 cut(s) 588, 601
AlwNI CAGNNNCTG 1 cut(s) 656
Ama87I CYCGRG 1 cut(s) 1646
AoxI GGCC 1 cut(s) 911
ApeKI GCWGC 7 cut(s) 99, 236, 1142, 1333, 1473, 1666, 1809
ApoI RAATTY 1 cut(s) 563
ArsI GACNNNNNNTTYG 2 cut(s) 527, 559
AseI ATTAAT 2 cut(s) 1008, 1314
Asp700I GAANNNNTTC 2 cut(s) 1210, 1749
AspLEI GCGC 1 cut(s) 1699
AsuC2I CCSGG 1 cut(s) 867
AsuHPI GGTGA 8 cut(s) 82, 592, 609, 654, 678, 983, 1607, 1983
AvaI CYCGRG 1 cut(s) 1646
AxyI CCTNAGG 1 cut(s) 1064
BamHI GGATCC 1 cut(s) 593
BanI GGYRCC 1 cut(s) 1375
BanII GRGCYC 3 cut(s) 26, 736, 1838
BbsI GAAGAC 3 cut(s) 477, 624, 1212
Bbv12I GWGCWC 1 cut(s) 1653
BbvI GCAGC 7 cut(s) 111, 248, 1154, 1320, 1485, 1653, 1796
BccI CCATC 5 cut(s) 52, 373, 583, 605, 1265
BceAI ACGGC 2 cut(s) 143, 655
BciT130I CCWGG 6 cut(s) 184, 651, 690, 738, 930, 1803
BciVI GTATCC 1 cut(s) 451
BclI TGATCA 1 cut(s) 1404
BcnI CCSGG 1 cut(s) 867
BcoDI GTCTC 4 cut(s) 6, 549, 712, 930
BfaI CTAG 3 cut(s) 296, 410, 1704
BfmI CTRYAG 1 cut(s) 1890
BfuAI ACCTGC 2 cut(s) 1535, 1626
BfuI GTATCC 1 cut(s) 451
BisI GCNGC 8 cut(s) 84, 100, 237, 1143, 1334, 1474, 1667, 1810
BlsI GCNGC 8 cut(s) 85, 101, 238, 1144, 1335, 1475, 1668, 1811
Bme1390I CCNGG 7 cut(s) 184, 651, 690, 738, 867, 930, 1803
BmeRI GACNNNNNGTC 1 cut(s) 393
BmeT110I CYCGRG 1 cut(s) 1646
BmiI GGNNCC 6 cut(s) 25, 367, 595, 934, 1377, 1525
BmrFI CCNGG 7 cut(s) 184, 651, 690, 738, 867, 930, 1803
BmrI ACTGGG 2 cut(s) 615, 1834
BmsI GCATC 3 cut(s) 1038, 1291, 1653
BmuI ACTGGG 2 cut(s) 615, 1834
BpiI GAAGAC 3 cut(s) 477, 624, 1212
BplI GAGNNNNNCTC 4 cut(s) 910, 942, 1284, 1316
BpmI CTGGAG 5 cut(s) 166, 711, 912, 1289, 1713
BpuEI CTTGAG 1 cut(s) 1323
BpuMI CCSGG 1 cut(s) 867
BsaI GGTCTC 1 cut(s) 712
BsaJI CCNNGG 9 cut(s) 183, 369, 649, 716, 736, 993, 1801, 1802, 1969
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 179, 209
Bsc4I CCNNNNNNNGG 5 cut(s) 962, 1155, 1202, 1723, 1804
Bse1I ACTGG 8 cut(s) 573, 603, 621, 825, 861, 1207, 1306, 1840
Bse21I CCTNAGG 1 cut(s) 1064
Bse3DI GCAATG 1 cut(s) 1076
BseBI CCWGG 6 cut(s) 184, 651, 690, 738, 930, 1803
BseDI CCNNGG 9 cut(s) 183, 369, 649, 716, 736, 993, 1801, 1802, 1969
BseGI GGATG 2 cut(s) 44, 1668
BseLI CCNNNNNNNGG 5 cut(s) 962, 1155, 1202, 1723, 1804
BseMI GCAATG 1 cut(s) 1076
BseMII CTCAG 5 cut(s) 570, 899, 1078, 1746, 1988
BseNI ACTGG 8 cut(s) 573, 603, 621, 825, 861, 1207, 1306, 1840
BseRI GAGGAG 3 cut(s) 16, 116, 1292
BseXI GCAGC 7 cut(s) 111, 248, 1154, 1320, 1485, 1653, 1796
BsgI GTGCAG 1 cut(s) 1890
Bsh1236I CGCG 2 cut(s) 629, 1699
BshFI GGCC 1 cut(s) 913
BshNI GGYRCC 1 cut(s) 1375
BsiHKAI GWGCWC 1 cut(s) 1653
BsiHKCI CYCGRG 1 cut(s) 1646
BsiSI CCGG 2 cut(s) 813, 867
BslFI GGGAC 3 cut(s) 632, 849, 1769
BslI CCNNNNNNNGG 5 cut(s) 962, 1155, 1202, 1723, 1804
BsmAI GTCTC 4 cut(s) 6, 549, 712, 930
BsmFI GGGAC 3 cut(s) 632, 849, 1769
BsmI GAATGC 2 cut(s) 1476, 1974
BsnI GGCC 1 cut(s) 913
Bso31I GGTCTC 1 cut(s) 712
BsoBI CYCGRG 1 cut(s) 1646
Bsp1286I GDGCHC 4 cut(s) 26, 736, 1653, 1838
Bsp143I GATC 4 cut(s) 593, 1018, 1404, 1700
Bsp19I CCATGG 1 cut(s) 993
BspACI CCGC 6 cut(s) 81, 84, 93, 156, 627, 1466
BspANI GGCC 1 cut(s) 913
BspCNI CTCAG 5 cut(s) 569, 900, 1077, 1747, 1989
BspFNI CGCG 2 cut(s) 629, 1699
BspLI GGNNCC 6 cut(s) 25, 367, 595, 934, 1377, 1525
BspMAI CTGCAG 1 cut(s) 1894
BspMI ACCTGC 2 cut(s) 1535, 1626
BspPI GGATC 2 cut(s) 588, 601
BspQI GCTCTTC 1 cut(s) 1826
BspT107I GGYRCC 1 cut(s) 1375
BspTNI GGTCTC 1 cut(s) 712
BsrDI GCAATG 1 cut(s) 1076
BsrI ACTGG 8 cut(s) 573, 603, 621, 825, 861, 1207, 1306, 1840
BssECI CCNNGG 9 cut(s) 183, 369, 649, 716, 736, 993, 1801, 1802, 1969
BssMI GATC 4 cut(s) 593, 1018, 1404, 1700
BssT1I CCWWGG 3 cut(s) 369, 716, 993
Bst2UI CCWGG 6 cut(s) 184, 651, 690, 738, 930, 1803
Bst4CI ACNGT 6 cut(s) 268, 349, 774, 1495, 1594, 1911
Bst6I CTCTTC 6 cut(s) 311, 715, 736, 1724, 1826, 1886
BstC8I GCNNGC 4 cut(s) 97, 120, 732, 1515
BstDEI CTNAG 7 cut(s) 556, 908, 1064, 1236, 1755, 1982, 1997
BstDSI CCRYGG 2 cut(s) 993, 1969
BstF5I GGATG 2 cut(s) 44, 1668
BstFNI CGCG 2 cut(s) 629, 1699
BstHHI GCGC 1 cut(s) 1699
BstKTI GATC 4 cut(s) 596, 1021, 1407, 1703
BstMAI GTCTC 4 cut(s) 6, 549, 712, 930
BstMBI GATC 4 cut(s) 593, 1018, 1404, 1700
BstMWI GCNNNNNNNGC 2 cut(s) 92, 1384
BstNI CCWGG 6 cut(s) 184, 651, 690, 738, 930, 1803
BstNSI RCATGY 1 cut(s) 1430
BstSCI CCNGG 7 cut(s) 182, 649, 688, 736, 865, 928, 1801
BstSFI CTRYAG 1 cut(s) 1890
BstUI CGCG 2 cut(s) 629, 1699
BstV1I GCAGC 7 cut(s) 111, 248, 1154, 1320, 1485, 1653, 1796
BstV2I GAAGAC 3 cut(s) 477, 624, 1212
BstX2I RGATCY 1 cut(s) 593
BstXI CCANNNNNNTGG 1 cut(s) 994
BstYI RGATCY 1 cut(s) 593
Bsu36I CCTNAGG 1 cut(s) 1064
BsuI GTATCC 1 cut(s) 451
BsuRI GGCC 1 cut(s) 913
BtgI CCRYGG 2 cut(s) 993, 1969
BtsCI GGATG 2 cut(s) 44, 1668
BtsI GCAGTG 1 cut(s) 1055
BtsIMutI CAGTG 7 cut(s) 580, 708, 905, 1055, 1221, 1407, 1907
BveI ACCTGC 2 cut(s) 1535, 1626
Cac8I GCNNGC 4 cut(s) 97, 120, 732, 1515
CaiI CAGNNNCTG 1 cut(s) 656
CfoI GCGC 1 cut(s) 1699
CseI GACGC 1 cut(s) 618
Csp6I GTAC 5 cut(s) 260, 900, 1289, 1496, 1762
CviAII CATG 5 cut(s) 988, 994, 1427, 1670, 1688
CviQI GTAC 5 cut(s) 260, 900, 1289, 1496, 1762
DdeI CTNAG 7 cut(s) 556, 908, 1064, 1236, 1755, 1982, 1997
DpnI GATC 4 cut(s) 595, 1020, 1406, 1702
DpnII GATC 4 cut(s) 593, 1018, 1404, 1700
DriI GACNNNNNGTC 1 cut(s) 393
Eam1104I CTCTTC 6 cut(s) 311, 715, 736, 1724, 1826, 1886
Eam1105I GACNNNNNGTC 1 cut(s) 393
EarI CTCTTC 6 cut(s) 311, 715, 736, 1724, 1826, 1886
EciI GGCGGA 2 cut(s) 70, 145
Eco130I CCWWGG 3 cut(s) 369, 716, 993
Eco147I AGGCCT 1 cut(s) 913
Eco24I GRGCYC 3 cut(s) 26, 736, 1838
Eco31I GGTCTC 1 cut(s) 712
Eco32I GATATC 1 cut(s) 1161
Eco57I CTGAAG 6 cut(s) 292, 477, 1065, 1197, 1539, 1867
Eco81I CCTNAGG 1 cut(s) 1064
Eco88I CYCGRG 1 cut(s) 1646
EcoRII CCWGG 6 cut(s) 182, 649, 688, 736, 928, 1801
EcoRV GATATC 1 cut(s) 1161
EcoT14I CCWWGG 3 cut(s) 369, 716, 993
EcoT22I ATGCAT 3 cut(s) 1015, 1284, 1432
EcoT38I GRGCYC 3 cut(s) 26, 736, 1838
ErhI CCWWGG 3 cut(s) 369, 716, 993
FaeI CATG 5 cut(s) 991, 997, 1430, 1673, 1691
FalI AAGNNNNNCTT 6 cut(s) 368, 400, 464, 496, 960, 992
FaqI GGGAC 3 cut(s) 632, 849, 1769
FatI CATG 5 cut(s) 987, 993, 1426, 1669, 1687
FbaI TGATCA 1 cut(s) 1404
FblI GTMKAC 1 cut(s) 60
Fnu4HI GCNGC 8 cut(s) 84, 100, 237, 1143, 1334, 1474, 1667, 1810
FokI GGATG 2 cut(s) 31, 1675
FriOI GRGCYC 3 cut(s) 26, 736, 1838
Fsp4HI GCNGC 8 cut(s) 84, 100, 237, 1143, 1334, 1474, 1667, 1810
FspBI CTAG 3 cut(s) 296, 410, 1704
GlaI GCGC 1 cut(s) 1698
GluI GCNGC 8 cut(s) 84, 100, 237, 1143, 1334, 1474, 1667, 1810
GsuI CTGGAG 5 cut(s) 166, 711, 912, 1289, 1713
HaeIII GGCC 1 cut(s) 913
HapII CCGG 2 cut(s) 813, 867
HgaI GACGC 1 cut(s) 618
HhaI GCGC 1 cut(s) 1699
Hin1II CATG 5 cut(s) 991, 997, 1430, 1673, 1691
Hin6I GCGC 1 cut(s) 1697
HinP1I GCGC 1 cut(s) 1697
HincII GTYRAC 1 cut(s) 202
HindII GTYRAC 1 cut(s) 202
HpaI GTTAAC 1 cut(s) 202
HpaII CCGG 2 cut(s) 813, 867
HphI GGTGA 8 cut(s) 82, 592, 609, 654, 678, 983, 1607, 1983
Hpy166II GTNNAC 4 cut(s) 61, 202, 902, 1590
Hpy188I TCNGA 9 cut(s) 107, 311, 445, 496, 559, 757, 845, 1106, 2023
Hpy188III TCNNGA 6 cut(s) 546, 885, 1262, 1508, 1754, 2015
Hpy8I GTNNAC 4 cut(s) 61, 202, 902, 1590
Hpy99I CGWCG 2 cut(s) 164, 757
HpyAV CCTTC 8 cut(s) 175, 501, 618, 962, 1432, 1514, 1797, 2024
HpyCH4III ACNGT 6 cut(s) 268, 349, 774, 1495, 1594, 1911
HpyCH4IV ACGT 1 cut(s) 752
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 1384
HpyF3I CTNAG 7 cut(s) 556, 908, 1064, 1236, 1755, 1982, 1997
HpySE526I ACGT 1 cut(s) 752
Hsp92II CATG 5 cut(s) 991, 997, 1430, 1673, 1691
HspAI GCGC 1 cut(s) 1697
Ksp22I TGATCA 1 cut(s) 1404
KspAI GTTAAC 1 cut(s) 202
Kzo9I GATC 4 cut(s) 593, 1018, 1404, 1700
LguI GCTCTTC 1 cut(s) 1826
LmnI GCTCC 3 cut(s) 29, 653, 1694
Lsp1109I GCAGC 7 cut(s) 111, 248, 1154, 1320, 1485, 1653, 1796
LweI GCATC 3 cut(s) 1038, 1291, 1653
MaeI CTAG 3 cut(s) 296, 410, 1704
MaeII ACGT 1 cut(s) 752
MaeIII GTNAC 1 cut(s) 1055
MalI GATC 4 cut(s) 595, 1020, 1406, 1702
MboI GATC 4 cut(s) 593, 1018, 1404, 1700
MflI RGATCY 1 cut(s) 593
MhlI GDGCHC 4 cut(s) 26, 736, 1653, 1838
MlyI GAGTC 3 cut(s) 321, 455, 1737
MmeI TCCRAC 5 cut(s) 130, 735, 1375, 1804, 1876
Mph1103I ATGCAT 3 cut(s) 1015, 1284, 1432
MroXI GAANNNNTTC 2 cut(s) 1210, 1749
MslI CAYNNNNRTG 1 cut(s) 992
MspA1I CMGCKG 1 cut(s) 1333
MspI CCGG 2 cut(s) 813, 867
MspR9I CCNGG 7 cut(s) 184, 651, 690, 738, 867, 930, 1803
Mva1269I GAATGC 2 cut(s) 1476, 1974
MvaI CCWGG 6 cut(s) 184, 651, 690, 738, 930, 1803
MvnI CGCG 2 cut(s) 629, 1699
MwoI GCNNNNNNNGC 2 cut(s) 92, 1384
NciI CCSGG 1 cut(s) 867
NcoI CCATGG 1 cut(s) 993
NdeII GATC 4 cut(s) 593, 1018, 1404, 1700
NlaIII CATG 5 cut(s) 991, 997, 1430, 1673, 1691
NlaIV GGNNCC 6 cut(s) 25, 367, 595, 934, 1377, 1525
NmuCI GTSAC 1 cut(s) 1055
NsiI ATGCAT 3 cut(s) 1015, 1284, 1432
NspI RCATGY 1 cut(s) 1430
PacI TTAATTAA 1 cut(s) 1452
PaeR7I CTCGAG 1 cut(s) 1646
PaqCI CACCTGC 1 cut(s) 1626
PasI CCCWGGG 1 cut(s) 1802
PceI AGGCCT 1 cut(s) 913
PciSI GCTCTTC 1 cut(s) 1826
PcsI WCGNNNNNNNCGW 4 cut(s) 35, 126, 168, 544
PctI GAATGC 2 cut(s) 1476, 1974
PdmI GAANNNNTTC 2 cut(s) 1210, 1749
PfeI GAWTC 8 cut(s) 698, 1001, 1504, 1610, 1676, 1916, 2001, 2018
PflMI CCANNNNNTGG 1 cut(s) 1202
PkrI GCNGC 8 cut(s) 85, 101, 238, 1144, 1335, 1475, 1668, 1811
PleI GAGTC 3 cut(s) 320, 454, 1736
PpsI GAGTC 3 cut(s) 320, 454, 1736
PshBI ATTAAT 2 cut(s) 1008, 1314
Psp6I CCWGG 6 cut(s) 182, 649, 688, 736, 928, 1801
PspGI CCWGG 6 cut(s) 182, 649, 688, 736, 928, 1801
PspN4I GGNNCC 6 cut(s) 25, 367, 595, 934, 1377, 1525
PspXI VCTCGAGB 1 cut(s) 1646
PstI CTGCAG 1 cut(s) 1894
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 1 cut(s) 593
PvuII CAGCTG 1 cut(s) 1333
RsaI GTAC 5 cut(s) 261, 901, 1290, 1497, 1763
RsaNI GTAC 5 cut(s) 260, 900, 1289, 1496, 1762
RseI CAYNNNNRTG 1 cut(s) 992
SapI GCTCTTC 1 cut(s) 1826
SatI GCNGC 8 cut(s) 84, 100, 237, 1143, 1334, 1474, 1667, 1810
Sau3AI GATC 4 cut(s) 593, 1018, 1404, 1700
SchI GAGTC 3 cut(s) 321, 455, 1737
ScrFI CCNGG 7 cut(s) 184, 651, 690, 738, 867, 930, 1803
SduI GDGCHC 4 cut(s) 26, 736, 1653, 1838
SfaNI GCATC 3 cut(s) 1038, 1291, 1653
SfcI CTRYAG 1 cut(s) 1890
Sfr274I CTCGAG 1 cut(s) 1646
SlaI CTCGAG 1 cut(s) 1646
SmiMI CAYNNNNRTG 1 cut(s) 992
SmlI CTYRAG 2 cut(s) 1338, 1646
SmoI CTYRAG 2 cut(s) 1338, 1646
SseBI AGGCCT 1 cut(s) 913
SsiI CCGC 6 cut(s) 81, 84, 93, 156, 627, 1466
SspI AATATT 1 cut(s) 220
SspMI CTAG 3 cut(s) 296, 410, 1704
StuI AGGCCT 1 cut(s) 913
StyD4I CCNGG 7 cut(s) 182, 649, 688, 736, 865, 928, 1801
StyI CCWWGG 3 cut(s) 369, 716, 993
TaaI ACNGT 6 cut(s) 268, 349, 774, 1495, 1594, 1911
TaiI ACGT 1 cut(s) 755
TaqI TCGA 5 cut(s) 547, 1398, 1480, 1507, 1647
TaqII GACCGA 1 cut(s) 46
TatI WGTACW 3 cut(s) 899, 1495, 1761
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 8 cut(s) 698, 1001, 1504, 1610, 1676, 1916, 2001, 2018
TscAI CASTG 7 cut(s) 580, 708, 912, 1055, 1221, 1414, 1914
TseFI GTSAC 1 cut(s) 1055
TseI GCWGC 7 cut(s) 99, 236, 1142, 1333, 1473, 1666, 1809
Tsp45I GTSAC 1 cut(s) 1055
TspDTI ATGAA 6 cut(s) 503, 668, 1281, 1451, 1557, 1967
TspGWI ACGGA 2 cut(s) 1843, 1958
TspRI CASTG 7 cut(s) 580, 708, 912, 1055, 1221, 1414, 1914
Van91I CCANNNNNTGG 1 cut(s) 1202
VspI ATTAAT 2 cut(s) 1008, 1314
XapI RAATTY 1 cut(s) 563
XceI RCATGY 1 cut(s) 1430
XcmI CCANNNNNNNNNTGG 1 cut(s) 376
XhoI CTCGAG 1 cut(s) 1646
XmiI GTMKAC 1 cut(s) 60
XmnI GAANNNNTTC 2 cut(s) 1210, 1749
XspI CTAG 3 cut(s) 296, 410, 1704
Zsp2I ATGCAT 3 cut(s) 1015, 1284, 1432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.