Vacuolar fusion protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28390 |
| fragaria_vesca | FvH4_3g32210 FvH4_3g32210 FvH4_3g32210 |
| malus_domestica | MD03G1118200.v1.1 MD11G1136600.v1.1 |
| prunus_persica | Prupe.6G102100_v2.0.a1 Prupe.6G102100_v2.0.a1 |
| pyrus_communis | pycom11g11310 |
| rosa_chinensis | RchiOBHm_Chr5g0058821 |
| rosa_laevigata | RLG00000035254 |
| rosa_roxburghii | Rroxscaffold_1G00021560 |
| rosa_rugosa | Rorug05G0319400 |
| rosa_samantha | Rh5AG384200 Rh5BG396100 Rh5CG420000 Rh5DG411900 |
| rosa_wichuraiana | Rw5G036200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 962 |
| Acc36I | ACCTGC | 1 cut(s) | 962 |
| Acc65I | GGTACC | 1 cut(s) | 463 |
| AccB1I | GGYRCC | 2 cut(s) | 463, 974 |
| AciI | CCGC | 4 cut(s) | 93, 149, 912, 1406 |
| AclWI | GGATC | 6 cut(s) | 90, 151, 654, 1370, 1530, 1715 |
| AcoI | YGGCCR | 1 cut(s) | 90 |
| AcuI | CTGAAG | 1 cut(s) | 252 |
| AcvI | CACGTG | 1 cut(s) | 263 |
| AcyI | GRCGYC | 1 cut(s) | 132 |
| AfaI | GTAC | 3 cut(s) | 465, 730, 1529 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 507, 857, 1412, 1466, 1827 |
| AflIII | ACRYGT | 3 cut(s) | 478, 1086, 1530 |
| AgsI | TTSAA | 4 cut(s) | 24, 1289, 1303, 1431 |
| AhlI | ACTAGT | 1 cut(s) | 1241 |
| AjnI | CCWGG | 4 cut(s) | 171, 220, 466, 1692 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1449, 1481 |
| Alw21I | GWGCWC | 1 cut(s) | 1060 |
| Alw26I | GTCTC | 1 cut(s) | 104 |
| AlwI | GGATC | 6 cut(s) | 90, 151, 654, 1370, 1530, 1715 |
| Ama87I | CYCGRG | 1 cut(s) | 77 |
| AoxI | GGCC | 7 cut(s) | 90, 204, 320, 453, 666, 1065, 1634 |
| ApaI | GGGCCC | 1 cut(s) | 1638 |
| ApeKI | GCWGC | 4 cut(s) | 215, 336, 968, 1712 |
| Asp718I | GGTACC | 1 cut(s) | 463 |
| AspLEI | GCGC | 1 cut(s) | 220 |
| AspS9I | GGNCC | 9 cut(s) | 294, 320, 666, 701, 1294, 1332, 1478, 1634, 1635 |
| AsuC2I | CCSGG | 1 cut(s) | 670 |
| AsuHPI | GGTGA | 4 cut(s) | 161, 1539, 1681, 1789 |
| AsuII | TTCGAA | 1 cut(s) | 1654 |
| AsuNHI | GCTAGC | 1 cut(s) | 589 |
| AvaI | CYCGRG | 1 cut(s) | 77 |
| AvaII | GGWCC | 5 cut(s) | 294, 701, 1294, 1332, 1478 |
| BaeGI | GKGCMC | 1 cut(s) | 1638 |
| BanI | GGYRCC | 2 cut(s) | 463, 974 |
| BanII | GRGCYC | 2 cut(s) | 332, 1638 |
| BauI | CACGAG | 1 cut(s) | 457 |
| BbrPI | CACGTG | 1 cut(s) | 263 |
| BbsI | GAAGAC | 3 cut(s) | 868, 932, 1527 |
| Bbv12I | GWGCWC | 1 cut(s) | 1060 |
| BbvI | GCAGC | 4 cut(s) | 202, 348, 955, 1724 |
| BccI | CCATC | 3 cut(s) | 311, 428, 1337 |
| BceAI | ACGGC | 1 cut(s) | 145 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 104, 138 |
| BciT130I | CCWGG | 4 cut(s) | 173, 222, 468, 1694 |
| BcnI | CCSGG | 1 cut(s) | 670 |
| BcoDI | GTCTC | 1 cut(s) | 104 |
| BcuI | ACTAGT | 1 cut(s) | 1241 |
| BfaI | CTAG | 6 cut(s) | 333, 590, 857, 1164, 1242, 1808 |
| BfmI | CTRYAG | 1 cut(s) | 969 |
| BfuAI | ACCTGC | 1 cut(s) | 962 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 212 |
| BisI | GCNGC | 5 cut(s) | 93, 216, 337, 969, 1713 |
| BlsI | GCNGC | 5 cut(s) | 94, 217, 338, 970, 1714 |
| Bme1390I | CCNGG | 5 cut(s) | 173, 222, 468, 670, 1694 |
| Bme18I | GGWCC | 5 cut(s) | 294, 701, 1294, 1332, 1478 |
| BmeT110I | CYCGRG | 1 cut(s) | 77 |
| BmgT120I | GGNCC | 9 cut(s) | 294, 320, 666, 701, 1294, 1332, 1478, 1634, 1635 |
| BmiI | GGNNCC | 7 cut(s) | 465, 702, 738, 976, 1458, 1636, 1637 |
| BmrFI | CCNGG | 5 cut(s) | 173, 222, 468, 670, 1694 |
| BmrI | ACTGGG | 1 cut(s) | 1642 |
| BmtI | GCTAGC | 1 cut(s) | 593 |
| BmuI | ACTGGG | 1 cut(s) | 1642 |
| BpiI | GAAGAC | 3 cut(s) | 868, 932, 1527 |
| BpmI | CTGGAG | 2 cut(s) | 329, 372 |
| Bpu14I | TTCGAA | 1 cut(s) | 1654 |
| BpuEI | CTTGAG | 1 cut(s) | 1250 |
| BpuMI | CCSGG | 1 cut(s) | 670 |
| BsaAI | YACGTR | 2 cut(s) | 263, 1531 |
| BsaHI | GRCGYC | 1 cut(s) | 132 |
| BsaI | GGTCTC | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 4 cut(s) | 78, 1176, 1624, 1692 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 26, 56, 355, 385, 1423, 1453 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 507, 857, 1412, 1466, 1827 |
| Bse1I | ACTGG | 3 cut(s) | 375, 663, 1648 |
| BseBI | CCWGG | 4 cut(s) | 173, 222, 468, 1694 |
| BseDI | CCNNGG | 4 cut(s) | 78, 1176, 1624, 1692 |
| BseGI | GGATG | 5 cut(s) | 496, 762, 888, 1075, 1356 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 507, 857, 1412, 1466, 1827 |
| BseMII | CTCAG | 2 cut(s) | 1330, 1530 |
| BseNI | ACTGG | 3 cut(s) | 375, 663, 1648 |
| BseRI | GAGGAG | 3 cut(s) | 254, 749, 1376 |
| BseSI | GKGCMC | 1 cut(s) | 1638 |
| BseXI | GCAGC | 4 cut(s) | 202, 348, 955, 1724 |
| BshFI | GGCC | 7 cut(s) | 92, 206, 322, 455, 668, 1067, 1636 |
| BshNI | GGYRCC | 2 cut(s) | 463, 974 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1060 |
| BsiHKCI | CYCGRG | 1 cut(s) | 77 |
| BsiSI | CCGG | 2 cut(s) | 30, 669 |
| BslFI | GGGAC | 1 cut(s) | 714 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 507, 857, 1412, 1466, 1827 |
| BsmAI | GTCTC | 1 cut(s) | 104 |
| BsmFI | GGGAC | 1 cut(s) | 714 |
| BsnI | GGCC | 7 cut(s) | 92, 206, 322, 455, 668, 1067, 1636 |
| Bso31I | GGTCTC | 1 cut(s) | 104 |
| BsoBI | CYCGRG | 1 cut(s) | 77 |
| Bsp119I | TTCGAA | 1 cut(s) | 1654 |
| Bsp120I | GGGCCC | 1 cut(s) | 1634 |
| Bsp1286I | GDGCHC | 3 cut(s) | 332, 1060, 1638 |
| Bsp1407I | TGTACA | 1 cut(s) | 728 |
| Bsp143I | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| Bsp19I | CCATGG | 1 cut(s) | 1176 |
| BspACI | CCGC | 4 cut(s) | 93, 149, 912, 1406 |
| BspANI | GGCC | 7 cut(s) | 92, 206, 322, 455, 668, 1067, 1636 |
| BspCNI | CTCAG | 2 cut(s) | 1329, 1531 |
| BspLI | GGNNCC | 7 cut(s) | 465, 702, 738, 976, 1458, 1636, 1637 |
| BspMAI | CTGCAG | 1 cut(s) | 973 |
| BspMI | ACCTGC | 1 cut(s) | 962 |
| BspOI | GCTAGC | 1 cut(s) | 593 |
| BspPI | GGATC | 6 cut(s) | 90, 151, 654, 1370, 1530, 1715 |
| BspT104I | TTCGAA | 1 cut(s) | 1654 |
| BspT107I | GGYRCC | 2 cut(s) | 463, 974 |
| BspTNI | GGTCTC | 1 cut(s) | 104 |
| BsrGI | TGTACA | 1 cut(s) | 728 |
| BsrI | ACTGG | 3 cut(s) | 375, 663, 1648 |
| BssECI | CCNNGG | 4 cut(s) | 78, 1176, 1624, 1692 |
| BssMI | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| BssNI | GRCGYC | 1 cut(s) | 132 |
| BssSI | CACGAG | 1 cut(s) | 457 |
| BssT1I | CCWWGG | 1 cut(s) | 1176 |
| Bst2BI | CACGAG | 1 cut(s) | 457 |
| Bst2UI | CCWGG | 4 cut(s) | 173, 222, 468, 1694 |
| Bst6I | CTCTTC | 4 cut(s) | 417, 886, 1077, 1651 |
| BstACI | GRCGYC | 1 cut(s) | 132 |
| BstAUI | TGTACA | 1 cut(s) | 728 |
| BstBAI | YACGTR | 2 cut(s) | 263, 1531 |
| BstBI | TTCGAA | 1 cut(s) | 1654 |
| BstC8I | GCNNGC | 6 cut(s) | 151, 453, 591, 966, 1160, 1816 |
| BstDEI | CTNAG | 3 cut(s) | 539, 1316, 1539 |
| BstDSI | CCRYGG | 1 cut(s) | 1176 |
| BstEII | GGTNACC | 1 cut(s) | 1687 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 855 |
| BstF5I | GGATG | 5 cut(s) | 496, 762, 888, 1075, 1356 |
| BstHHI | GCGC | 1 cut(s) | 220 |
| BstKTI | GATC | 7 cut(s) | 85, 146, 180, 649, 1378, 1525, 1723 |
| BstMAI | GTCTC | 1 cut(s) | 104 |
| BstMBI | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 98, 212, 336, 342, 974, 1064, 1736 |
| BstNI | CCWGG | 4 cut(s) | 173, 222, 468, 1694 |
| BstNSI | RCATGY | 2 cut(s) | 482, 1090 |
| BstPI | GGTNACC | 1 cut(s) | 1687 |
| BstSCI | CCNGG | 5 cut(s) | 171, 220, 466, 668, 1692 |
| BstSFI | CTRYAG | 1 cut(s) | 969 |
| BstSLI | GKGCMC | 1 cut(s) | 1638 |
| BstV1I | GCAGC | 4 cut(s) | 202, 348, 955, 1724 |
| BstV2I | GAAGAC | 3 cut(s) | 868, 932, 1527 |
| BsuRI | GGCC | 7 cut(s) | 92, 206, 322, 455, 668, 1067, 1636 |
| BtgI | CCRYGG | 1 cut(s) | 1176 |
| BtsCI | GGATG | 5 cut(s) | 496, 762, 888, 1075, 1356 |
| BtsI | GCAGTG | 1 cut(s) | 346 |
| BtsIMutI | CAGTG | 3 cut(s) | 346, 1324, 1778 |
| BveI | ACCTGC | 1 cut(s) | 962 |
| Cac8I | GCNNGC | 6 cut(s) | 151, 453, 591, 966, 1160, 1816 |
| CfoI | GCGC | 1 cut(s) | 220 |
| Cfr13I | GGNCC | 9 cut(s) | 294, 320, 666, 701, 1294, 1332, 1478, 1634, 1635 |
| CseI | GACGC | 1 cut(s) | 121 |
| Csp6I | GTAC | 3 cut(s) | 464, 729, 1528 |
| CviQI | GTAC | 3 cut(s) | 464, 729, 1528 |
| DdeI | CTNAG | 3 cut(s) | 539, 1316, 1539 |
| DpnI | GATC | 7 cut(s) | 84, 145, 179, 648, 1377, 1524, 1722 |
| DpnII | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| EaeI | YGGCCR | 1 cut(s) | 90 |
| Eam1104I | CTCTTC | 4 cut(s) | 417, 886, 1077, 1651 |
| EarI | CTCTTC | 4 cut(s) | 417, 886, 1077, 1651 |
| Eco130I | CCWWGG | 1 cut(s) | 1176 |
| Eco147I | AGGCCT | 2 cut(s) | 455, 1067 |
| Eco24I | GRGCYC | 2 cut(s) | 332, 1638 |
| Eco31I | GGTCTC | 1 cut(s) | 104 |
| Eco47I | GGWCC | 5 cut(s) | 294, 701, 1294, 1332, 1478 |
| Eco57I | CTGAAG | 1 cut(s) | 252 |
| Eco72I | CACGTG | 1 cut(s) | 263 |
| Eco88I | CYCGRG | 1 cut(s) | 77 |
| Eco91I | GGTNACC | 1 cut(s) | 1687 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 855 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1635 |
| EcoO65I | GGTNACC | 1 cut(s) | 1687 |
| EcoRII | CCWGG | 4 cut(s) | 171, 220, 466, 1692 |
| EcoT14I | CCWWGG | 1 cut(s) | 1176 |
| EcoT22I | ATGCAT | 3 cut(s) | 722, 931, 1620 |
| EcoT38I | GRGCYC | 2 cut(s) | 332, 1638 |
| ErhI | CCWWGG | 1 cut(s) | 1176 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 512, 544 |
| FaqI | GGGAC | 1 cut(s) | 714 |
| FauI | CCCGC | 2 cut(s) | 142, 919 |
| Fnu4HI | GCNGC | 5 cut(s) | 93, 216, 337, 969, 1713 |
| FokI | GGATG | 5 cut(s) | 503, 769, 875, 1062, 1363 |
| FriOI | GRGCYC | 2 cut(s) | 332, 1638 |
| Fsp4HI | GCNGC | 5 cut(s) | 93, 216, 337, 969, 1713 |
| FspBI | CTAG | 6 cut(s) | 333, 590, 857, 1164, 1242, 1808 |
| GlaI | GCGC | 1 cut(s) | 219 |
| GluI | GCNGC | 5 cut(s) | 93, 216, 337, 969, 1713 |
| GsuI | CTGGAG | 2 cut(s) | 329, 372 |
| HaeIII | GGCC | 7 cut(s) | 92, 206, 322, 455, 668, 1067, 1636 |
| HapII | CCGG | 2 cut(s) | 30, 669 |
| HgaI | GACGC | 1 cut(s) | 121 |
| HhaI | GCGC | 1 cut(s) | 220 |
| Hin1I | GRCGYC | 1 cut(s) | 132 |
| Hin6I | GCGC | 1 cut(s) | 218 |
| HinP1I | GCGC | 1 cut(s) | 218 |
| HincII | GTYRAC | 1 cut(s) | 1418 |
| HindII | GTYRAC | 1 cut(s) | 1418 |
| HindIII | AAGCTT | 1 cut(s) | 1601 |
| HpaII | CCGG | 2 cut(s) | 30, 669 |
| HphI | GGTGA | 4 cut(s) | 161, 1539, 1681, 1789 |
| Hpy166II | GTNNAC | 2 cut(s) | 1031, 1418 |
| Hpy188III | TCNNGA | 9 cut(s) | 15, 181, 390, 549, 567, 1079, 1208, 1373, 1442 |
| Hpy8I | GTNNAC | 2 cut(s) | 1031, 1418 |
| Hpy99I | CGWCG | 3 cut(s) | 38, 137, 191 |
| HpyAV | CCTTC | 2 cut(s) | 333, 637 |
| HpyCH4IV | ACGT | 4 cut(s) | 262, 1387, 1530, 1671 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 98, 212, 336, 342, 974, 1064, 1736 |
| HpyF3I | CTNAG | 3 cut(s) | 539, 1316, 1539 |
| HpySE526I | ACGT | 4 cut(s) | 262, 1387, 1530, 1671 |
| Hsp92I | GRCGYC | 1 cut(s) | 132 |
| HspAI | GCGC | 1 cut(s) | 218 |
| KpnI | GGTACC | 1 cut(s) | 467 |
| Kzo9I | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| LmnI | GCTCC | 5 cut(s) | 32, 304, 736, 1363, 1811 |
| Lsp1109I | GCAGC | 4 cut(s) | 202, 348, 955, 1724 |
| MaeI | CTAG | 6 cut(s) | 333, 590, 857, 1164, 1242, 1808 |
| MaeII | ACGT | 4 cut(s) | 262, 1387, 1530, 1671 |
| MaeIII | GTNAC | 2 cut(s) | 542, 1687 |
| MalI | GATC | 7 cut(s) | 84, 145, 179, 648, 1377, 1524, 1722 |
| MboI | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| MfeI | CAATTG | 1 cut(s) | 86 |
| MhlI | GDGCHC | 3 cut(s) | 332, 1060, 1638 |
| MluCI | AATT | 8 cut(s) | 86, 208, 298, 393, 621, 705, 1152, 1629 |
| MlyI | GAGTC | 2 cut(s) | 251, 755 |
| MmeI | TCCRAC | 2 cut(s) | 744, 884 |
| Mph1103I | ATGCAT | 3 cut(s) | 722, 931, 1620 |
| MslI | CAYNNNNRTG | 3 cut(s) | 483, 576, 1080 |
| MspA1I | CMGCKG | 1 cut(s) | 726 |
| MspI | CCGG | 2 cut(s) | 30, 669 |
| MspR9I | CCNGG | 5 cut(s) | 173, 222, 468, 670, 1694 |
| MunI | CAATTG | 1 cut(s) | 86 |
| MvaI | CCWGG | 4 cut(s) | 173, 222, 468, 1694 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 98, 212, 336, 342, 974, 1064, 1736 |
| NciI | CCSGG | 1 cut(s) | 670 |
| NcoI | CCATGG | 1 cut(s) | 1176 |
| NdeII | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| NheI | GCTAGC | 1 cut(s) | 589 |
| NlaIV | GGNNCC | 7 cut(s) | 465, 702, 738, 976, 1458, 1636, 1637 |
| NmuCI | GTSAC | 1 cut(s) | 1687 |
| NsiI | ATGCAT | 3 cut(s) | 722, 931, 1620 |
| NspI | RCATGY | 2 cut(s) | 482, 1090 |
| NspV | TTCGAA | 1 cut(s) | 1654 |
| PaqCI | CACCTGC | 1 cut(s) | 962 |
| PceI | AGGCCT | 2 cut(s) | 455, 1067 |
| PciI | ACATGT | 2 cut(s) | 478, 1086 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 42, 186 |
| PfeI | GAWTC | 9 cut(s) | 11, 829, 907, 998, 1121, 1139, 1279, 1324, 1436 |
| PkrI | GCNGC | 5 cut(s) | 94, 217, 338, 970, 1714 |
| PleI | GAGTC | 2 cut(s) | 250, 754 |
| PmaCI | CACGTG | 1 cut(s) | 263 |
| PmlI | CACGTG | 1 cut(s) | 263 |
| PpsI | GAGTC | 2 cut(s) | 250, 754 |
| Ppu21I | YACGTR | 2 cut(s) | 263, 1531 |
| PscI | ACATGT | 2 cut(s) | 478, 1086 |
| Psp6I | CCWGG | 4 cut(s) | 171, 220, 466, 1692 |
| PspCI | CACGTG | 1 cut(s) | 263 |
| PspEI | GGTNACC | 1 cut(s) | 1687 |
| PspGI | CCWGG | 4 cut(s) | 171, 220, 466, 1692 |
| PspN4I | GGNNCC | 7 cut(s) | 465, 702, 738, 976, 1458, 1636, 1637 |
| PspOMI | GGGCCC | 1 cut(s) | 1634 |
| PspPI | GGNCC | 9 cut(s) | 294, 320, 666, 701, 1294, 1332, 1478, 1634, 1635 |
| PstI | CTGCAG | 1 cut(s) | 973 |
| PvuII | CAGCTG | 1 cut(s) | 726 |
| RsaI | GTAC | 3 cut(s) | 465, 730, 1529 |
| RsaNI | GTAC | 3 cut(s) | 464, 729, 1528 |
| RseI | CAYNNNNRTG | 3 cut(s) | 483, 576, 1080 |
| SatI | GCNGC | 5 cut(s) | 93, 216, 337, 969, 1713 |
| Sau3AI | GATC | 7 cut(s) | 82, 143, 177, 646, 1375, 1522, 1720 |
| Sau96I | GGNCC | 9 cut(s) | 294, 320, 666, 701, 1294, 1332, 1478, 1634, 1635 |
| SchI | GAGTC | 2 cut(s) | 251, 755 |
| ScrFI | CCNGG | 5 cut(s) | 173, 222, 468, 670, 1694 |
| SduI | GDGCHC | 3 cut(s) | 332, 1060, 1638 |
| SfcI | CTRYAG | 1 cut(s) | 969 |
| SfuI | TTCGAA | 1 cut(s) | 1654 |
| SinI | GGWCC | 5 cut(s) | 294, 701, 1294, 1332, 1478 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 483, 576, 1080 |
| SmlI | CTYRAG | 1 cut(s) | 1265 |
| SmoI | CTYRAG | 1 cut(s) | 1265 |
| SpeI | ACTAGT | 1 cut(s) | 1241 |
| Sse9I | AATT | 8 cut(s) | 86, 208, 298, 393, 621, 705, 1152, 1629 |
| SseBI | AGGCCT | 2 cut(s) | 455, 1067 |
| SsiI | CCGC | 4 cut(s) | 93, 149, 912, 1406 |
| SspMI | CTAG | 6 cut(s) | 333, 590, 857, 1164, 1242, 1808 |
| StuI | AGGCCT | 2 cut(s) | 455, 1067 |
| StyD4I | CCNGG | 5 cut(s) | 171, 220, 466, 668, 1692 |
| StyI | CCWWGG | 1 cut(s) | 1176 |
| TaiI | ACGT | 4 cut(s) | 265, 1390, 1533, 1674 |
| TaqI | TCGA | 6 cut(s) | 14, 180, 201, 245, 326, 1654 |
| TaqII | GACCGA | 2 cut(s) | 128, 1638 |
| TasI | AATT | 8 cut(s) | 86, 208, 298, 393, 621, 705, 1152, 1629 |
| TatI | WGTACW | 1 cut(s) | 728 |
| TauI | GCSGC | 1 cut(s) | 95 |
| TfiI | GAWTC | 9 cut(s) | 11, 829, 907, 998, 1121, 1139, 1279, 1324, 1436 |
| TscAI | CASTG | 3 cut(s) | 346, 1324, 1778 |
| TseFI | GTSAC | 1 cut(s) | 1687 |
| TseI | GCWGC | 4 cut(s) | 215, 336, 968, 1712 |
| Tsp45I | GTSAC | 1 cut(s) | 1687 |
| TspDTI | ATGAA | 8 cut(s) | 128, 523, 594, 914, 1064, 1489, 1677, 1815 |
| TspRI | CASTG | 3 cut(s) | 346, 1324, 1778 |
| VpaK11BI | GGWCC | 5 cut(s) | 294, 701, 1294, 1332, 1478 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 855 |
| XceI | RCATGY | 2 cut(s) | 482, 1090 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 304 |
| XspI | CTAG | 6 cut(s) | 333, 590, 857, 1164, 1242, 1808 |
| Zsp2I | ATGCAT | 3 cut(s) | 722, 931, 1620 |