Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0013229

Physical Location & Seq

Genomic Coordinates Reverse (-)

66344670 .. 66352857

Gene Structure 8188 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG384200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGACCTCCGCGCCGAGCTCCGGCGACGAAACCTCCGACCCGAAGCCCAACCCGATTACAAAGCCCCCGGAGGACCAATTGGCCGCCCTCGCGTTATCCGACACCGATAGCCAAGCAAACGGCGTCGCAAATGAATCGCCGCGCGGGAACAATCACAATGAGATCGAGAACGAAGAGGAGGTGGCGGCGCTGACCAATTCGGCTCCGTCTGGTTCGTCTGAGGTGGTGGAATCCAGCGGTGGTGGTATTCTGTGGGCGAGGAGCAATTCGGAGCTGGAGGCCGACGGGCCGGAGAGCCCTAGCAGCAGCGGCTATGCCGGCGGCAGAGGGAGTAGTAGTGCCAGTAGTGATGGTTCCGGGATCGATGAGATTGCGGAAGTTAGTGATGTTGAGGTTGTTGATGGTGTTTCGGATTCACAAGCGCCGTGGGTGCCCGGAAAACGGCATGTTGATGAGGATGATGCTTCCATATCATGGAGAAAAAGGAAGAAGCACTTTTTCATACTAAGTAACTCTGGCAAACCAATATATTCCAGACATGGAGATGAACACAAACTAGCAGGATTTTCAGCAACATTACAAGCCATAATTTCCTTTGTTGAGAATGGTGGAGATCGTGTCAAATTGGTTAGGGCTGGGAAGCATCAGGTGGTTTTTCTTGTCAAGGGACCAATTTACCTGGTATGCATCAGCTGCACAGAAGAGCCTTATGAGTCTTTAAGAATGCAATTGGAACTTATATACGGTCAGATGCTGCTTATTCTTACGAAGTCAGTAAATAGATGTTTTGAGAAGAATCCGAAGTTTGATATGACACCTTTGCTGGGAGGAACAGATATTGTCTTCTCTTCCCTCATCCATTCTTTCAGTTGGAATCCTGCCACATTTCTTCATGCATATACTTGTCTTCCCCTTGCTTATGCGACAAGGCAAGCTGCAGGTGCCATATTGCAAGATGTTGCTGATTCAGGTGTCCTCTTTGCAATATTGATGTGCAAACACAAGGTTATCAGTCTTGTTGGTGCTCAGAAAGCGTCTCTTCATCCTGATGACATGCTATTGCTATCCAACTTTGTTATGGCATCAGAATCATTTAGGACATCTGAATCTTTCTCACCAATTTGCTTGCCAAGATATAATGCCATGGCATTTTTGTATGCTTATGTCCATTTTTTCGATGCTGACACATACTTGATGTTGCTTACTACTAGTTCAGAAGCCTTCTATCATCTTAAAGATTGCAGGATTCGTATTGAAATGGTCCTTCTGAAGTCGAGTGTCCTCAGTGAGATTCAGAGATCCATGCTAGATGGTGGAATGCGTGTTGAGGAGTTGCCTCTTGATCCTTTACCTCGATCTGGATCTTTTTCTCCTCATTTGAATCAACACACACTTCCAACAGATTCTCCCGACAGGTTCAGGGAACCATATGATGGCGTAGGTGGCCCTGCTGGACTCTGGCATTTTGTATATCGTAGTATCTTTTTGGATCAATATGTATCTTCTGAGTTCTCAGCACCAATAAATAGTCCTCGTCAGCAGAAAAGATTATATAGAGCTTACCAGAAGCTTTACGCTTCCATGCATGAAAGAGGAATTGGGCCCCACAAAACCCAGTTTAGAAGAGATGAGAATTATGTTCTACTCTGCTGGGTCACCCAGGATTTTGAGCTTTATGCAGCATTTGATCCACTTGCAGACAAGGTAGTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0006810 GO:0006886 GO:0006996 GO:0007033 GO:0007034 GO:0007275 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016192 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0045324 GO:0046907 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Mon1

Protein Analysis

571

Amino Acids

63.0

Weight (kDa)

5.32

Isoelectric Point (pI)

49.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fuz_longin_1	PF19036	164 - 284	5.2e-30	First Longin domain of FUZ, MON1 and HPS1
Fuz_longin_2	PF19037	324 - 417	1.6e-21	Second Longin domain of FUZ, MON1 and HPS1
Fuz_longin_3	PF19038	485 - 568	3e-15	Third Longin domain of FUZ, MON1 and HPS1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28390
fragaria_vesca	FvH4_3g32210 FvH4_3g32210 FvH4_3g32210
malus_domestica	MD03G1118200.v1.1 MD11G1136600.v1.1
prunus_persica	Prupe.6G102100_v2.0.a1 Prupe.6G102100_v2.0.a1
pyrus_communis	pycom11g11310
rosa_chinensis	RchiOBHm_Chr5g0058821
rosa_laevigata	RLG00000035254
rosa_roxburghii	Rroxscaffold_1G00021560
rosa_rugosa	Rorug05G0319400
rosa_samantha	Rh5AG384200 Rh5BG396100 Rh5CG420000 Rh5DG411900
rosa_wichuraiana	Rw5G036200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	929
Acc36I	ACCTGC	1 cut(s)	929
AccB1I	GGYRCC	2 cut(s)	430, 941
AccB7I	CCANNNNNTGG	2 cut(s)	474, 1433
AccII	CGCG	4 cut(s)	11, 92, 142, 144
AciI	CCGC	9 cut(s)	9, 84, 140, 144, 185, 237, 309, 321, 374
AclWI	GGATC	6 cut(s)	368, 1293, 1337, 1369, 1497, 1682
AcoI	YGGCCR	1 cut(s)	81
AcuI	CTGAAG	1 cut(s)	1289
AcyI	GRCGYC	1 cut(s)	123
AfiI	CCNNNNNNNGG	6 cut(s)	20, 441, 474, 824, 1358, 1433
AgsI	TTSAA	2 cut(s)	1256, 1381
AhlI	ACTAGT	1 cut(s)	1208
AjnI	CCWGG	2 cut(s)	678, 1659
AjuI	GAANNNNNNNTTGG	2 cut(s)	1581, 1613
AluBI	AGCT	7 cut(s)	18, 274, 693, 935, 1559, 1570, 1672
AluI	AGCT	7 cut(s)	18, 274, 693, 935, 1559, 1570, 1672
Alw21I	GWGCWC	2 cut(s)	20, 1027
Alw26I	GTCTC	1 cut(s)	1041
AlwI	GGATC	6 cut(s)	368, 1293, 1337, 1369, 1497, 1682
AlwNI	CAGNNNCTG	1 cut(s)	754
AoxI	GGCC	5 cut(s)	81, 279, 287, 1444, 1601
ApaI	GGGCCC	1 cut(s)	1605
ApeKI	GCWGC	6 cut(s)	303, 306, 693, 754, 935, 1679
AspLEI	GCGC	4 cut(s)	13, 144, 190, 424
AspS9I	GGNCC	7 cut(s)	73, 287, 668, 1261, 1445, 1601, 1602
AsuC2I	CCSGG	3 cut(s)	68, 358, 435
AsuHPI	GGTGA	2 cut(s)	1107, 1648
AvaII	GGWCC	3 cut(s)	73, 668, 1261
BaeGI	GKGCMC	2 cut(s)	435, 1605
BanI	GGYRCC	2 cut(s)	430, 941
BanII	GRGCYC	3 cut(s)	20, 299, 1605
BbsI	GAAGAC	2 cut(s)	835, 899
Bbv12I	GWGCWC	2 cut(s)	20, 1027
BbvI	GCAGC	6 cut(s)	315, 318, 680, 741, 922, 1691
BccI	CCATC	4 cut(s)	344, 395, 1304, 1427
BceAI	ACGGC	3 cut(s)	136, 409, 458
BcgI	CGANNNNNNTGC	4 cut(s)	117, 151, 353, 387
BciT130I	CCWGG	2 cut(s)	680, 1661
BcnI	CCSGG	3 cut(s)	68, 358, 435
BcoDI	GTCTC	1 cut(s)	1041
BcuI	ACTAGT	1 cut(s)	1208
BfaI	CTAG	4 cut(s)	300, 557, 1209, 1307
BfmI	CTRYAG	1 cut(s)	936
BfoI	RGCGCY	2 cut(s)	191, 425
BfuAI	ACCTGC	1 cut(s)	929
Bme1390I	CCNGG	5 cut(s)	68, 358, 435, 680, 1661
Bme18I	GGWCC	3 cut(s)	73, 668, 1261
BmgT120I	GGNCC	7 cut(s)	73, 287, 668, 1261, 1445, 1601, 1602
BmiI	GGNNCC	8 cut(s)	204, 355, 432, 669, 943, 1425, 1603, 1604
BmrFI	CCNGG	5 cut(s)	68, 358, 435, 680, 1661
BmrI	ACTGGG	1 cut(s)	1609
BmsI	GCATC	6 cut(s)	451, 652, 696, 741, 1091, 1168
BmuI	ACTGGG	1 cut(s)	1609
BpiI	GAAGAC	2 cut(s)	835, 899
BpmI	CTGGAG	1 cut(s)	296
BpuMI	CCSGG	3 cut(s)	68, 358, 435
Bsa29I	ATCGAT	1 cut(s)	363
BsaBI	GATNNNNATC	1 cut(s)	1360
BsaHI	GRCGYC	1 cut(s)	123
BsaJI	CCNNGG	4 cut(s)	66, 425, 1143, 1659
BsaXI	ACNNNNNCTCC	8 cut(s)	17, 47, 322, 352, 603, 633, 1390, 1420
Bsc4I	CCNNNNNNNGG	6 cut(s)	20, 441, 474, 824, 1358, 1433
Bse118I	RCCGGY	1 cut(s)	317
Bse1I	ACTGG	2 cut(s)	342, 1615
Bse8I	GATNNNNATC	1 cut(s)	1360
BseBI	CCWGG	2 cut(s)	680, 1661
BseCI	ATCGAT	1 cut(s)	363
BseDI	CCNNGG	4 cut(s)	66, 425, 1143, 1659
BseGI	GGATG	3 cut(s)	463, 855, 1042
BseJI	GATNNNNATC	1 cut(s)	1360
BseLI	CCNNNNNNNGG	6 cut(s)	20, 441, 474, 824, 1358, 1433
BseMII	CTCAG	5 cut(s)	210, 1040, 1297, 1497, 1527
BseNI	ACTGG	2 cut(s)	342, 1615
BseRI	GAGGAG	4 cut(s)	191, 274, 1343, 1362
BseSI	GKGCMC	2 cut(s)	435, 1605
BseXI	GCAGC	6 cut(s)	315, 318, 680, 741, 922, 1691
BseYI	CCCAGC	3 cut(s)	635, 823, 1650
BsgI	GTGCAG	1 cut(s)	679
Bsh1236I	CGCG	4 cut(s)	11, 92, 142, 144
BshFI	GGCC	5 cut(s)	83, 281, 289, 1446, 1603
BshNI	GGYRCC	2 cut(s)	430, 941
BshVI	ATCGAT	1 cut(s)	363
BsiHKAI	GWGCWC	2 cut(s)	20, 1027
BsiSI	CCGG	6 cut(s)	21, 68, 290, 318, 357, 435
BslFI	GGGAC	1 cut(s)	681
BslI	CCNNNNNNNGG	6 cut(s)	20, 441, 474, 824, 1358, 1433
BsmAI	GTCTC	1 cut(s)	1041
BsmBI	CGTCTC	1 cut(s)	1041
BsmFI	GGGAC	1 cut(s)	681
BsmI	GAATGC	2 cut(s)	729, 1323
BsnI	GGCC	5 cut(s)	83, 281, 289, 1446, 1603
Bsp120I	GGGCCC	1 cut(s)	1601
Bsp1286I	GDGCHC	5 cut(s)	20, 299, 435, 1027, 1605
Bsp143I	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
Bsp19I	CCATGG	1 cut(s)	1143
BspACI	CCGC	9 cut(s)	9, 84, 140, 144, 185, 237, 309, 321, 374
BspANI	GGCC	5 cut(s)	83, 281, 289, 1446, 1603
BspCNI	CTCAG	5 cut(s)	211, 1039, 1296, 1498, 1526
BspDI	ATCGAT	1 cut(s)	363
BspFNI	CGCG	4 cut(s)	11, 92, 142, 144
BspLI	GGNNCC	8 cut(s)	204, 355, 432, 669, 943, 1425, 1603, 1604
BspMAI	CTGCAG	1 cut(s)	940
BspMI	ACCTGC	1 cut(s)	929
BspPI	GGATC	6 cut(s)	368, 1293, 1337, 1369, 1497, 1682
BspQI	GCTCTTC	1 cut(s)	696
BspT107I	GGYRCC	2 cut(s)	430, 941
BsrFI	RCCGGY	1 cut(s)	317
BsrI	ACTGG	2 cut(s)	342, 1615
BssAI	RCCGGY	1 cut(s)	317
BssECI	CCNNGG	4 cut(s)	66, 425, 1143, 1659
BssMI	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	1 cut(s)	1143
Bst2UI	CCWGG	2 cut(s)	680, 1661
Bst4CI	ACNGT	1 cut(s)	746
Bst6I	CTCTTC	5 cut(s)	168, 696, 853, 1044, 1618
BstACI	GRCGYC	1 cut(s)	123
BstAPI	GCANNNNNTGC	1 cut(s)	693
BstC8I	GCNNGC	3 cut(s)	319, 933, 1127
BstDEI	CTNAG	6 cut(s)	219, 506, 1026, 1283, 1506, 1513
BstDSI	CCRYGG	2 cut(s)	425, 1143
BstEII	GGTNACC	1 cut(s)	1654
BstF5I	GGATG	3 cut(s)	463, 855, 1042
BstFNI	CGCG	4 cut(s)	11, 92, 142, 144
BstH2I	RGCGCY	2 cut(s)	191, 425
BstHHI	GCGC	4 cut(s)	13, 144, 190, 424
BstKTI	GATC	9 cut(s)	165, 363, 616, 1301, 1345, 1358, 1364, 1492, 1690
BstMAI	GTCTC	1 cut(s)	1041
BstMBI	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
BstMWI	GCNNNNNNNGC	9 cut(s)	89, 303, 309, 318, 430, 693, 941, 1031, 1443
BstNI	CCWGG	2 cut(s)	680, 1661
BstNSI	RCATGY	2 cut(s)	449, 1057
BstPI	GGTNACC	1 cut(s)	1654
BstSCI	CCNGG	5 cut(s)	66, 356, 433, 678, 1659
BstSFI	CTRYAG	1 cut(s)	936
BstSLI	GKGCMC	2 cut(s)	435, 1605
BstUI	CGCG	4 cut(s)	11, 92, 142, 144
BstV1I	GCAGC	6 cut(s)	315, 318, 680, 741, 922, 1691
BstV2I	GAAGAC	2 cut(s)	835, 899
BstX2I	RGATCY	2 cut(s)	1298, 1361
BstYI	RGATCY	2 cut(s)	1298, 1361
Bsu15I	ATCGAT	1 cut(s)	363
BsuRI	GGCC	5 cut(s)	83, 281, 289, 1446, 1603
BsuTUI	ATCGAT	1 cut(s)	363
BtgI	CCRYGG	2 cut(s)	425, 1143
BtsCI	GGATG	3 cut(s)	463, 855, 1042
BtsIMutI	CAGTG	1 cut(s)	1291
BveI	ACCTGC	1 cut(s)	929
Cac8I	GCNNGC	3 cut(s)	319, 933, 1127
CaiI	CAGNNNCTG	1 cut(s)	754
CfoI	GCGC	4 cut(s)	13, 144, 190, 424
Cfr10I	RCCGGY	1 cut(s)	317
Cfr13I	GGNCC	7 cut(s)	73, 287, 668, 1261, 1445, 1601, 1602
ClaI	ATCGAT	1 cut(s)	363
CseI	GACGC	2 cut(s)	112, 1023
CsiI	ACCWGGT	1 cut(s)	678
CspCI	CAANNNNNGTGG	2 cut(s)	407, 442
CviAII	CATG	9 cut(s)	446, 474, 539, 893, 1054, 1144, 1303, 1582, 1586
DdeI	CTNAG	6 cut(s)	219, 506, 1026, 1283, 1506, 1513
DpnI	GATC	9 cut(s)	164, 362, 615, 1300, 1344, 1357, 1363, 1491, 1689
DpnII	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
EaeI	YGGCCR	1 cut(s)	81
Eam1104I	CTCTTC	5 cut(s)	168, 696, 853, 1044, 1618
EarI	CTCTTC	5 cut(s)	168, 696, 853, 1044, 1618
Ecl136II	GAGCTC	1 cut(s)	18
Eco130I	CCWWGG	1 cut(s)	1143
Eco24I	GRGCYC	3 cut(s)	20, 299, 1605
Eco47I	GGWCC	3 cut(s)	73, 668, 1261
Eco53kI	GAGCTC	1 cut(s)	18
Eco57I	CTGAAG	1 cut(s)	1289
Eco91I	GGTNACC	1 cut(s)	1654
EcoICRI	GAGCTC	1 cut(s)	18
EcoO109I	RGGNCCY	1 cut(s)	1602
EcoO65I	GGTNACC	1 cut(s)	1654
EcoRII	CCWGG	2 cut(s)	678, 1659
EcoT14I	CCWWGG	1 cut(s)	1143
EcoT22I	ATGCAT	3 cut(s)	689, 898, 1587
EcoT38I	GRGCYC	3 cut(s)	20, 299, 1605
ErhI	CCWWGG	1 cut(s)	1143
Esp3I	CGTCTC	1 cut(s)	1041
FaeI	CATG	9 cut(s)	449, 477, 542, 896, 1057, 1147, 1306, 1585, 1589
FalI	AAGNNNNNCTT	4 cut(s)	479, 511, 1023, 1055
FaqI	GGGAC	1 cut(s)	681
FatI	CATG	9 cut(s)	445, 473, 538, 892, 1053, 1143, 1302, 1581, 1585
FauI	CCCGC	1 cut(s)	137
FauNDI	CATATG	1 cut(s)	1429
FokI	GGATG	3 cut(s)	470, 842, 1029
FriOI	GRGCYC	3 cut(s)	20, 299, 1605
FspBI	CTAG	4 cut(s)	300, 557, 1209, 1307
GlaI	GCGC	4 cut(s)	12, 143, 189, 423
GsaI	CCCAGC	3 cut(s)	639, 827, 1654
GsuI	CTGGAG	1 cut(s)	296
HaeII	RGCGCY	2 cut(s)	191, 425
HaeIII	GGCC	5 cut(s)	83, 281, 289, 1446, 1603
HapII	CCGG	6 cut(s)	21, 68, 290, 318, 357, 435
HgaI	GACGC	2 cut(s)	112, 1023
HhaI	GCGC	4 cut(s)	13, 144, 190, 424
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	9 cut(s)	449, 477, 542, 896, 1057, 1147, 1306, 1585, 1589
Hin6I	GCGC	4 cut(s)	11, 142, 188, 422
HinP1I	GCGC	4 cut(s)	11, 142, 188, 422
HindIII	AAGCTT	1 cut(s)	1568
HpaII	CCGG	6 cut(s)	21, 68, 290, 318, 357, 435
HphI	GGTGA	2 cut(s)	1107, 1648
Hpy188III	TCNNGA	6 cut(s)	166, 534, 1046, 1340, 1359, 1409
Hpy99I	CGWCG	3 cut(s)	29, 128, 287
HpyAV	CCTTC	2 cut(s)	1231, 1274
HpyCH4III	ACNGT	1 cut(s)	746
HpyF10VI	GCNNNNNNNGC	9 cut(s)	89, 303, 309, 318, 430, 693, 941, 1031, 1443
HpyF3I	CTNAG	6 cut(s)	219, 506, 1026, 1283, 1506, 1513
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	9 cut(s)	449, 477, 542, 896, 1057, 1147, 1306, 1585, 1589
HspAI	GCGC	4 cut(s)	11, 142, 188, 422
KroI	GCCGGC	1 cut(s)	317
KroNI	GCCGGC	1 cut(s)	319
Kzo9I	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
LguI	GCTCTTC	1 cut(s)	696
LmnI	GCTCC	4 cut(s)	23, 208, 261, 271
Lsp1109I	GCAGC	6 cut(s)	315, 318, 680, 741, 922, 1691
LweI	GCATC	6 cut(s)	451, 652, 696, 741, 1091, 1168
MabI	ACCWGGT	1 cut(s)	678
MaeI	CTAG	4 cut(s)	300, 557, 1209, 1307
MaeIII	GTNAC	2 cut(s)	509, 1654
MalI	GATC	9 cut(s)	164, 362, 615, 1300, 1344, 1357, 1363, 1491, 1689
MboI	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
MfeI	CAATTG	2 cut(s)	77, 728
MflI	RGATCY	2 cut(s)	1298, 1361
MhlI	GDGCHC	5 cut(s)	20, 299, 435, 1027, 1605
MlyI	GAGTC	2 cut(s)	722, 1449
MmeI	TCCRAC	5 cut(s)	60, 123, 851, 1092, 1421
Mph1103I	ATGCAT	3 cut(s)	689, 898, 1587
MroNI	GCCGGC	1 cut(s)	317
MseI	TTAA	3 cut(s)	719, 1233, 1714
MslI	CAYNNNNRTG	3 cut(s)	450, 543, 1047
MspA1I	CMGCKG	3 cut(s)	237, 309, 693
MspI	CCGG	6 cut(s)	21, 68, 290, 318, 357, 435
MspR9I	CCNGG	5 cut(s)	68, 358, 435, 680, 1661
MunI	CAATTG	2 cut(s)	77, 728
Mva1269I	GAATGC	2 cut(s)	729, 1323
MvaI	CCWGG	2 cut(s)	680, 1661
MvnI	CGCG	4 cut(s)	11, 92, 142, 144
MwoI	GCNNNNNNNGC	9 cut(s)	89, 303, 309, 318, 430, 693, 941, 1031, 1443
NaeI	GCCGGC	1 cut(s)	319
NciI	CCSGG	3 cut(s)	68, 358, 435
NcoI	CCATGG	1 cut(s)	1143
NdeI	CATATG	1 cut(s)	1429
NdeII	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
NgoMIV	GCCGGC	1 cut(s)	317
NlaIII	CATG	9 cut(s)	449, 477, 542, 896, 1057, 1147, 1306, 1585, 1589
NlaIV	GGNNCC	8 cut(s)	204, 355, 432, 669, 943, 1425, 1603, 1604
NmeAIII	GCCGAG	1 cut(s)	39
NmuCI	GTSAC	1 cut(s)	1654
NsiI	ATGCAT	3 cut(s)	689, 898, 1587
NspI	RCATGY	2 cut(s)	449, 1057
PaqCI	CACCTGC	1 cut(s)	929
PciSI	GCTCTTC	1 cut(s)	696
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 96
PctI	GAATGC	2 cut(s)	729, 1323
PdiI	GCCGGC	1 cut(s)	319
PflMI	CCANNNNNTGG	2 cut(s)	474, 1433
PfoI	TCCNGGA	1 cut(s)	356
PleI	GAGTC	2 cut(s)	721, 1449
PpsI	GAGTC	2 cut(s)	721, 1449
Psp124BI	GAGCTC	1 cut(s)	20
Psp6I	CCWGG	2 cut(s)	678, 1659
PspEI	GGTNACC	1 cut(s)	1654
PspFI	CCCAGC	3 cut(s)	635, 823, 1650
PspGI	CCWGG	2 cut(s)	678, 1659
PspN4I	GGNNCC	8 cut(s)	204, 355, 432, 669, 943, 1425, 1603, 1604
PspOMI	GGGCCC	1 cut(s)	1601
PspPI	GGNCC	7 cut(s)	73, 287, 668, 1261, 1445, 1601, 1602
PsrI	GAACNNNNNNTAC	2 cut(s)	337, 369
PstI	CTGCAG	1 cut(s)	940
PstNI	CAGNNNCTG	1 cut(s)	754
PsuI	RGATCY	2 cut(s)	1298, 1361
PvuII	CAGCTG	1 cut(s)	693
RseI	CAYNNNNRTG	3 cut(s)	450, 543, 1047
SacI	GAGCTC	1 cut(s)	20
SapI	GCTCTTC	1 cut(s)	696
SaqAI	TTAA	3 cut(s)	719, 1233, 1714
Sau3AI	GATC	9 cut(s)	162, 360, 613, 1298, 1342, 1355, 1361, 1489, 1687
Sau96I	GGNCC	7 cut(s)	73, 287, 668, 1261, 1445, 1601, 1602
SchI	GAGTC	2 cut(s)	722, 1449
ScrFI	CCNGG	5 cut(s)	68, 358, 435, 680, 1661
SduI	GDGCHC	5 cut(s)	20, 299, 435, 1027, 1605
SexAI	ACCWGGT	1 cut(s)	678
SfaNI	GCATC	6 cut(s)	451, 652, 696, 741, 1091, 1168
SfcI	CTRYAG	1 cut(s)	936
SinI	GGWCC	3 cut(s)	73, 668, 1261
SmiMI	CAYNNNNRTG	3 cut(s)	450, 543, 1047
SpeI	ACTAGT	1 cut(s)	1208
SsiI	CCGC	9 cut(s)	9, 84, 140, 144, 185, 237, 309, 321, 374
SspI	AATATT	1 cut(s)	987
SspMI	CTAG	4 cut(s)	300, 557, 1209, 1307
SstI	GAGCTC	1 cut(s)	20
StyD4I	CCNGG	5 cut(s)	66, 356, 433, 678, 1659
StyI	CCWWGG	1 cut(s)	1143
TaaI	ACNGT	1 cut(s)	746
TaqI	TCGA	5 cut(s)	165, 363, 1176, 1274, 1354
TauI	GCSGC	5 cut(s)	86, 142, 188, 312, 324
Tru1I	TTAA	3 cut(s)	719, 1233, 1714
Tru9I	TTAA	3 cut(s)	719, 1233, 1714
TscAI	CASTG	1 cut(s)	1291
TseFI	GTSAC	1 cut(s)	1654
TseI	GCWGC	6 cut(s)	303, 306, 693, 754, 935, 1679
Tsp45I	GTSAC	1 cut(s)	1654
TspDTI	ATGAA	6 cut(s)	147, 490, 561, 881, 1031, 1602
TspGWI	ACGGA	1 cut(s)	195
TspRI	CASTG	1 cut(s)	1291
Van91I	CCANNNNNTGG	2 cut(s)	474, 1433
VpaK11BI	GGWCC	3 cut(s)	73, 668, 1261
XceI	RCATGY	2 cut(s)	449, 1057
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1075
XspI	CTAG	4 cut(s)	300, 557, 1209, 1307
Zsp2I	ATGCAT	3 cut(s)	689, 898, 1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.