Prupe.6G113800_v2.0.a1

Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
8203919 .. 8205587
1669 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G113800.1

Sequence Viewer

Length: 264 bp
ATGGGTCAGATCCAATACTCCGAGAAGTACTTCGATGATATTTACGAGTACAGGCATGTGGTTCTTCCTCAGGAAGTGGCTAAACTGCTCCCAAAAAATCGGCTTCTCTCTGAAAATGAATGGCGCGCCATTGGAGTTCAGCAGAGCCGTGGCTGGGTTCACTATGCAATTCATCGCCCAGAGCCCCACATCATGCTCTTCAGGAGGCCACTGAACTATCAGCAACAGCAGGAGAATCAAGCCCAGCAGGTGCTTGCAAAGTGA

Protein Analysis

88

Amino Acids

10.55

Weight (kDa)

9.05

Isoelectric Point (pI)

68.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014191)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 238
Acc36I ACCTGC 1 cut(s) 238
AccII CGCG 1 cut(s) 126
AclWI GGATC 1 cut(s) 4
AcuI CTGAAG 1 cut(s) 184
AfaI GTAC 2 cut(s) 29, 50
AfiI CCNNNNNNNGG 1 cut(s) 154
AlwI GGATC 1 cut(s) 4
AoxI GGCC 1 cut(s) 206
AscI GGCGCGCC 1 cut(s) 124
Asp700I GAANNNNTTC 1 cut(s) 29
AspLEI GCGC 2 cut(s) 126, 128
AxyI CCTNAGG 1 cut(s) 69
BanII GRGCYC 1 cut(s) 186
BceAI ACGGC 1 cut(s) 132
BfuAI ACCTGC 1 cut(s) 238
BmcAI AGTACT 1 cut(s) 29
BsaJI CCNNGG 1 cut(s) 148
Bsc4I CCNNNNNNNGG 1 cut(s) 154
Bse21I CCTNAGG 1 cut(s) 69
BseDI CCNNGG 1 cut(s) 148
BseLI CCNNNNNNNGG 1 cut(s) 154
BseMII CTCAG 1 cut(s) 83
BsePI GCGCGC 1 cut(s) 124
BseYI CCCAGC 2 cut(s) 153, 243
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 1 cut(s) 208
BslI CCNNNNNNNGG 1 cut(s) 154
BsnI GGCC 1 cut(s) 208
Bsp1286I GDGCHC 1 cut(s) 186
Bsp143I GATC 1 cut(s) 9
BspANI GGCC 1 cut(s) 208
BspCNI CTCAG 1 cut(s) 82
BspFNI CGCG 1 cut(s) 126
BspMI ACCTGC 1 cut(s) 238
BspPI GGATC 1 cut(s) 4
BspQI GCTCTTC 1 cut(s) 203
BssECI CCNNGG 1 cut(s) 148
BssHII GCGCGC 1 cut(s) 124
BssMI GATC 1 cut(s) 9
Bst6I CTCTTC 1 cut(s) 203
BstC8I GCNNGC 2 cut(s) 126, 255
BstDEI CTNAG 1 cut(s) 69
BstDSI CCRYGG 1 cut(s) 148
BstFNI CGCG 1 cut(s) 126
BstHHI GCGC 2 cut(s) 126, 128
BstKTI GATC 1 cut(s) 12
BstMBI GATC 1 cut(s) 9
BstNSI RCATGY 1 cut(s) 59
BstUI CGCG 1 cut(s) 126
BstX2I RGATCY 1 cut(s) 9
BstYI RGATCY 1 cut(s) 9
Bsu36I CCTNAGG 1 cut(s) 69
BsuRI GGCC 1 cut(s) 208
BtgI CCRYGG 1 cut(s) 148
BtgZI GCGATG 1 cut(s) 158
BtsIMutI CAGTG 1 cut(s) 209
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 2 cut(s) 126, 255
CfoI GCGC 2 cut(s) 126, 128
Csp6I GTAC 2 cut(s) 28, 49
CviAII CATG 2 cut(s) 56, 193
CviJI RGCY 7 cut(s) 80, 103, 147, 153, 184, 208, 242
CviKI_1 RGCY 7 cut(s) 80, 103, 147, 153, 184, 208, 242
CviQI GTAC 2 cut(s) 28, 49
DdeI CTNAG 1 cut(s) 69
DpnI GATC 1 cut(s) 11
DpnII GATC 1 cut(s) 9
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Eco24I GRGCYC 1 cut(s) 186
Eco57I CTGAAG 1 cut(s) 184
Eco81I CCTNAGG 1 cut(s) 69
EcoT38I GRGCYC 1 cut(s) 186
FaeI CATG 2 cut(s) 59, 196
FaiI YATR 3 cut(s) 57, 165, 194
FatI CATG 2 cut(s) 55, 192
FriOI GRGCYC 1 cut(s) 186
GlaI GCGC 2 cut(s) 125, 127
GsaI CCCAGC 2 cut(s) 157, 247
HaeIII GGCC 1 cut(s) 208
HhaI GCGC 2 cut(s) 126, 128
Hin1II CATG 2 cut(s) 59, 196
Hin6I GCGC 2 cut(s) 124, 126
HinP1I GCGC 2 cut(s) 124, 126
HinfI GANTC 1 cut(s) 235
Hpy166II GTNNAC 1 cut(s) 160
Hpy188I TCNGA 3 cut(s) 9, 22, 112
Hpy188III TCNNGA 2 cut(s) 71, 202
Hpy8I GTNNAC 1 cut(s) 160
HpyCH4V TGCA 2 cut(s) 167, 257
HpyF3I CTNAG 1 cut(s) 69
Hsp92II CATG 2 cut(s) 59, 196
HspAI GCGC 2 cut(s) 124, 126
Kzo9I GATC 1 cut(s) 9
LguI GCTCTTC 1 cut(s) 203
LmnI GCTCC 1 cut(s) 93
LpnPI CCDG 8 cut(s) 37, 56, 139, 187, 192, 215, 233, 257
MalI GATC 1 cut(s) 11
MboI GATC 1 cut(s) 9
MboII GAAGA 2 cut(s) 56, 190
MflI RGATCY 1 cut(s) 9
MhlI GDGCHC 1 cut(s) 186
MluCI AATT 1 cut(s) 168
MnlI CCTC 2 cut(s) 78, 198
MroXI GAANNNNTTC 1 cut(s) 29
MvnI CGCG 1 cut(s) 126
NdeII GATC 1 cut(s) 9
NlaIII CATG 2 cut(s) 59, 196
NspI RCATGY 1 cut(s) 59
PalAI GGCGCGCC 1 cut(s) 124
PaqCI CACCTGC 1 cut(s) 238
PauI GCGCGC 1 cut(s) 124
PciSI GCTCTTC 1 cut(s) 203
PdmI GAANNNNTTC 1 cut(s) 29
PfeI GAWTC 1 cut(s) 235
PspFI CCCAGC 2 cut(s) 153, 243
PsuI RGATCY 1 cut(s) 9
PteI GCGCGC 1 cut(s) 124
RsaI GTAC 2 cut(s) 29, 50
RsaNI GTAC 2 cut(s) 28, 49
SapI GCTCTTC 1 cut(s) 203
Sau3AI GATC 1 cut(s) 9
ScaI AGTACT 1 cut(s) 29
SduI GDGCHC 1 cut(s) 186
SetI ASST 1 cut(s) 252
SgsI GGCGCGCC 1 cut(s) 124
Sse9I AATT 1 cut(s) 168
TaqI TCGA 1 cut(s) 33
TasI AATT 1 cut(s) 168
TatI WGTACW 2 cut(s) 27, 48
TfiI GAWTC 1 cut(s) 235
TscAI CASTG 1 cut(s) 216
TspDTI ATGAA 2 cut(s) 132, 161
TspRI CASTG 1 cut(s) 216
XceI RCATGY 1 cut(s) 59
XmnI GAANNNNTTC 1 cut(s) 29
ZrmI AGTACT 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.