Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0020242

Physical Location & Seq

Genomic Coordinates Reverse (-)

16272684 .. 16278424

Gene Structure 5741 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G165600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 861 bp

ATGCCGATGAACAGTACCTGTCGCTGGGAGAGGAAGAGAGAAGAGACAGTCGGAGCTGAAGTGTGGAAAGCCGTGCACAGAGAAAGTGGGGAGGTGGTGGCTCTGAAGCAGGTCTTCCTCTCGCGGCTCAACAGGCGCCTCAAGAATTGCTTGGATTGCGAGATCAAATTCTTGTCCTCTGTTTGCCACCCCAACATCGTTCGTCTCCTCAAAGCTTTCCAGAATGAAGGTTGCATATTCCTGGTCCTGGAATTCTGCAATGGGGGAAATTTGGCAGCCTATATTCGGCAACATGGGAGAGTTCAAGAACAGATTGCTAGAAAATTTATGCAGCAGCTTGGGGCTGGTTTGGAAATACTACATTCTCACCACATCATTCATAGAGACTTAAAACCTGAGGACATTCTACTCTCTCTCAGTGATGATGATGTGGTGGTAAAGGTGATTTCGGTCTCTCAAGCAATTAAATATGGAAGTTTCATTTTTTGCCTTTTCTTTTCTACTATGGACAGAAGCTTACATCCTGGTGATTATGCGGAGACAGTTTGTGGATCCCCATTATACATGGCACCTGAAGTTCTTCAGTTTGAAAGATATGATGGAAAGGTGCTTAAGAACATCAAGTCATCTACATGTCCCCCTTTTGACCAACTCATCCTTTCTCGGTTGCATCCAGACTCTGTTGATATGTGTTCAAAACTGTTGTCTCAAAATCCAGTTTATTGTCCGTGTGAGGACAAAGTCAAAGTTTATTCATTCGGTTTTGTGGTTCTAGCCATAGGGACCATGAATTTAGTTGTAGGGAAACAATATGGGAGGCTGAGTGTTCTCTTCAAGGTCAAGGAGGAGCATGAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008589 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010646 GO:0010647 GO:0010648 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023056 GO:0023057 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045879 GO:0045880 GO:0046777 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050789 GO:0050794 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04139 ko04140 ko04150 ko04212 map04136 map04138 map04139 map04140 map04150 map04212

Pfam Domains

Protein Families

Pkinase

Protein Analysis

287

Amino Acids

32.6

Weight (kDa)

8.4

Isoelectric Point (pI)

40.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0020242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49180 AT1G49180
malus_domestica	MD01G1113800.v1.1 MD07G1181900.v1.1
prunus_persica	Prupe.6G164600_v2.0.a1 Prupe.6G165600_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	100
AccB1I	GGYRCC	2 cut(s)	135, 568
AccII	CGCG	1 cut(s)	124
AciI	CCGC	2 cut(s)	124, 536
AclWI	GGATC	2 cut(s)	546, 559
AcsI	RAATTY	5 cut(s)	167, 251, 268, 323, 790
AcuI	CTGAAG	4 cut(s)	78, 125, 566, 594
AcyI	GRCGYC	1 cut(s)	136
AfaI	GTAC	1 cut(s)	16
AfiI	CCNNNNNNNGG	3 cut(s)	24, 247, 285
AflII	CTTAAG	1 cut(s)	611
AflIII	ACRYGT	1 cut(s)	632
AgsI	TTSAA	4 cut(s)	305, 590, 696, 835
AjnI	CCWGG	3 cut(s)	240, 246, 523
AluBI	AGCT	4 cut(s)	56, 215, 337, 516
AluI	AGCT	4 cut(s)	56, 215, 337, 516
Alw21I	GWGCWC	1 cut(s)	78
Alw26I	GTCTC	6 cut(s)	38, 209, 378, 457, 533, 711
Alw44I	GTGCAC	1 cut(s)	74
AlwI	GGATC	2 cut(s)	546, 559
AlwNI	CAGNNNCTG	2 cut(s)	18, 680
ApaLI	GTGCAC	1 cut(s)	74
ApeKI	GCWGC	3 cut(s)	275, 331, 334
ApoI	RAATTY	5 cut(s)	167, 251, 268, 323, 790
ArsI	GACNNNNNNTTYG	2 cut(s)	689, 721
Asp700I	GAANNNNTTC	1 cut(s)	579
AspLEI	GCGC	1 cut(s)	138
AspS9I	GGNCC	2 cut(s)	244, 783
AsuHPI	GGTGA	3 cut(s)	359, 454, 539
AvaII	GGWCC	2 cut(s)	244, 783
AxyI	CCTNAGG	1 cut(s)	396
BaeGI	GKGCMC	1 cut(s)	78
BamHI	GGATCC	1 cut(s)	551
BanI	GGYRCC	2 cut(s)	135, 568
BbsI	GAAGAC	1 cut(s)	106
Bbv12I	GWGCWC	1 cut(s)	78
BbvI	GCAGC	3 cut(s)	287, 343, 346
BccI	CCATC	1 cut(s)	593
BceAI	ACGGC	1 cut(s)	56
BciT130I	CCWGG	3 cut(s)	242, 248, 525
BcoDI	GTCTC	6 cut(s)	38, 209, 378, 457, 533, 711
BfaI	CTAG	2 cut(s)	318, 773
BfoI	RGCGCY	1 cut(s)	139
BfrI	CTTAAG	1 cut(s)	611
BfuAI	ACCTGC	1 cut(s)	100
BisI	GCNGC	4 cut(s)	125, 276, 332, 335
BlsI	GCNGC	4 cut(s)	126, 277, 333, 336
Bme1390I	CCNGG	3 cut(s)	242, 248, 525
Bme18I	GGWCC	2 cut(s)	244, 783
BmgT120I	GGNCC	2 cut(s)	244, 783
BmiI	GGNNCC	4 cut(s)	137, 553, 570, 784
BmrFI	CCNGG	3 cut(s)	242, 248, 525
BmsI	GCATC	1 cut(s)	679
BpiI	GAAGAC	1 cut(s)	106
BpuEI	CTTGAG	2 cut(s)	125, 441
BsaHI	GRCGYC	1 cut(s)	136
BsaI	GGTCTC	1 cut(s)	457
BsaXI	ACNNNNNCTCC	4 cut(s)	45, 75, 808, 838
Bsc4I	CCNNNNNNNGG	3 cut(s)	24, 247, 285
Bse1I	ACTGG	1 cut(s)	716
Bse21I	CCTNAGG	1 cut(s)	396
Bse3DI	GCAATG	1 cut(s)	265
BseBI	CCWGG	3 cut(s)	242, 248, 525
BseGI	GGATG	3 cut(s)	520, 654, 670
BseLI	CCNNNNNNNGG	3 cut(s)	24, 247, 285
BseMI	GCAATG	1 cut(s)	265
BseMII	CTCAG	3 cut(s)	387, 430, 812
BseNI	ACTGG	1 cut(s)	716
BseRI	GAGGAG	2 cut(s)	197, 860
BseSI	GKGCMC	1 cut(s)	78
BseXI	GCAGC	3 cut(s)	287, 343, 346
BseYI	CCCAGC	1 cut(s)	24
Bsh1236I	CGCG	1 cut(s)	124
BshNI	GGYRCC	2 cut(s)	135, 568
BsiHKAI	GWGCWC	1 cut(s)	78
BslFI	GGGAC	2 cut(s)	621, 796
BslI	CCNNNNNNNGG	3 cut(s)	24, 247, 285
BsmAI	GTCTC	6 cut(s)	38, 209, 378, 457, 533, 711
BsmBI	CGTCTC	1 cut(s)	209
BsmFI	GGGAC	2 cut(s)	621, 796
Bso31I	GGTCTC	1 cut(s)	457
Bsp1286I	GDGCHC	1 cut(s)	78
Bsp143I	GATC	2 cut(s)	162, 551
BspACI	CCGC	2 cut(s)	124, 536
BspCNI	CTCAG	3 cut(s)	388, 429, 813
BspFNI	CGCG	1 cut(s)	124
BspLI	GGNNCC	4 cut(s)	137, 553, 570, 784
BspMI	ACCTGC	1 cut(s)	100
BspPI	GGATC	2 cut(s)	546, 559
BspT107I	GGYRCC	2 cut(s)	135, 568
BspTI	CTTAAG	1 cut(s)	611
BspTNI	GGTCTC	1 cut(s)	457
BsrDI	GCAATG	1 cut(s)	265
BsrI	ACTGG	1 cut(s)	716
BssMI	GATC	2 cut(s)	162, 551
BssNI	GRCGYC	1 cut(s)	136
Bst2UI	CCWGG	3 cut(s)	242, 248, 525
Bst4CI	ACNGT	4 cut(s)	14, 49, 544, 702
Bst6I	CTCTTC	3 cut(s)	29, 36, 836
BstACI	GRCGYC	1 cut(s)	136
BstAFI	CTTAAG	1 cut(s)	611
BstDEI	CTNAG	3 cut(s)	396, 416, 821
BstF5I	GGATG	3 cut(s)	520, 654, 670
BstFNI	CGCG	1 cut(s)	124
BstH2I	RGCGCY	1 cut(s)	139
BstHHI	GCGC	1 cut(s)	138
BstKTI	GATC	2 cut(s)	165, 554
BstMAI	GTCTC	6 cut(s)	38, 209, 378, 457, 533, 711
BstMBI	GATC	2 cut(s)	162, 551
BstMWI	GCNNNNNNNGC	2 cut(s)	133, 156
BstNI	CCWGG	3 cut(s)	242, 248, 525
BstNSI	RCATGY	1 cut(s)	636
BstSCI	CCNGG	3 cut(s)	240, 246, 523
BstSLI	GKGCMC	1 cut(s)	78
BstUI	CGCG	1 cut(s)	124
BstV1I	GCAGC	3 cut(s)	287, 343, 346
BstV2I	GAAGAC	1 cut(s)	106
BstX2I	RGATCY	1 cut(s)	551
BstYI	RGATCY	1 cut(s)	551
Bsu36I	CCTNAGG	1 cut(s)	396
BtsCI	GGATG	3 cut(s)	520, 654, 670
BtsIMutI	CAGTG	1 cut(s)	424
BveI	ACCTGC	1 cut(s)	100
CaiI	CAGNNNCTG	2 cut(s)	18, 680
CfoI	GCGC	1 cut(s)	138
Cfr13I	GGNCC	2 cut(s)	244, 783
Csp6I	GTAC	1 cut(s)	15
CviAII	CATG	5 cut(s)	293, 565, 633, 787, 851
CviQI	GTAC	1 cut(s)	15
DdeI	CTNAG	3 cut(s)	396, 416, 821
DinI	GGCGCC	1 cut(s)	137
DpnI	GATC	2 cut(s)	164, 553
DpnII	GATC	2 cut(s)	162, 551
Eam1104I	CTCTTC	3 cut(s)	29, 36, 836
EarI	CTCTTC	3 cut(s)	29, 36, 836
Eco31I	GGTCTC	1 cut(s)	457
Eco47I	GGWCC	2 cut(s)	244, 783
Eco57I	CTGAAG	4 cut(s)	78, 125, 566, 594
Eco81I	CCTNAGG	1 cut(s)	396
EcoRI	GAATTC	1 cut(s)	251
EcoRII	CCWGG	3 cut(s)	240, 246, 523
EgeI	GGCGCC	1 cut(s)	137
EheI	GGCGCC	1 cut(s)	137
Esp3I	CGTCTC	1 cut(s)	209
FaeI	CATG	5 cut(s)	296, 568, 636, 790, 854
FalI	AAGNNNNNCTT	4 cut(s)	98, 130, 134, 166
FaqI	GGGAC	2 cut(s)	621, 796
FatI	CATG	5 cut(s)	292, 564, 632, 786, 850
Fnu4HI	GCNGC	4 cut(s)	125, 276, 332, 335
FokI	GGATG	3 cut(s)	507, 641, 657
Fsp4HI	GCNGC	4 cut(s)	125, 276, 332, 335
FspBI	CTAG	2 cut(s)	318, 773
GlaI	GCGC	1 cut(s)	137
GluI	GCNGC	4 cut(s)	125, 276, 332, 335
GsaI	CCCAGC	1 cut(s)	28
HaeII	RGCGCY	1 cut(s)	139
HhaI	GCGC	1 cut(s)	138
Hin1I	GRCGYC	1 cut(s)	136
Hin1II	CATG	5 cut(s)	296, 568, 636, 790, 854
Hin6I	GCGC	1 cut(s)	136
HinP1I	GCGC	1 cut(s)	136
HindIII	AAGCTT	2 cut(s)	213, 514
HinfI	GANTC	1 cut(s)	677
HphI	GGTGA	3 cut(s)	359, 454, 539
Hpy166II	GTNNAC	1 cut(s)	76
Hpy188I	TCNGA	2 cut(s)	53, 105
Hpy188III	TCNNGA	4 cut(s)	142, 220, 305, 674
Hpy8I	GTNNAC	1 cut(s)	76
HpyAV	CCTTC	1 cut(s)	221
HpyCH4III	ACNGT	4 cut(s)	14, 49, 544, 702
HpyCH4V	TGCA	5 cut(s)	76, 234, 258, 331, 670
HpyF10VI	GCNNNNNNNGC	2 cut(s)	133, 156
HpyF3I	CTNAG	3 cut(s)	396, 416, 821
Hsp92I	GRCGYC	1 cut(s)	136
Hsp92II	CATG	5 cut(s)	296, 568, 636, 790, 854
HspAI	GCGC	1 cut(s)	136
KasI	GGCGCC	1 cut(s)	135
Kzo9I	GATC	2 cut(s)	162, 551
LmnI	GCTCC	2 cut(s)	53, 847
Lsp1109I	GCAGC	3 cut(s)	287, 343, 346
LweI	GCATC	1 cut(s)	679
MaeI	CTAG	2 cut(s)	318, 773
MalI	GATC	2 cut(s)	164, 553
MboI	GATC	2 cut(s)	162, 551
MboII	GAAGA	5 cut(s)	46, 53, 106, 572, 823
MflI	RGATCY	1 cut(s)	551
MhlI	GDGCHC	1 cut(s)	78
MluCI	AATT	7 cut(s)	145, 167, 251, 268, 323, 462, 790
Mly113I	GGCGCC	1 cut(s)	136
MlyI	GAGTC	1 cut(s)	671
MmeI	TCCRAC	1 cut(s)	31
MroXI	GAANNNNTTC	1 cut(s)	579
MseI	TTAA	3 cut(s)	389, 465, 612
MslI	CAYNNNNRTG	2 cut(s)	525, 631
MspCI	CTTAAG	1 cut(s)	611
MspR9I	CCNGG	3 cut(s)	242, 248, 525
MvaI	CCWGG	3 cut(s)	242, 248, 525
MvnI	CGCG	1 cut(s)	124
MwoI	GCNNNNNNNGC	2 cut(s)	133, 156
NarI	GGCGCC	1 cut(s)	136
NdeII	GATC	2 cut(s)	162, 551
NlaIII	CATG	5 cut(s)	296, 568, 636, 790, 854
NlaIV	GGNNCC	4 cut(s)	137, 553, 570, 784
NspI	RCATGY	1 cut(s)	636
PciI	ACATGT	1 cut(s)	632
PdmI	GAANNNNTTC	1 cut(s)	579
PflFI	GACNNNGTC	1 cut(s)	740
PfoI	TCCNGGA	1 cut(s)	246
PkrI	GCNGC	4 cut(s)	126, 277, 333, 336
PleI	GAGTC	1 cut(s)	671
PluTI	GGCGCC	1 cut(s)	139
PpsI	GAGTC	1 cut(s)	671
PscI	ACATGT	1 cut(s)	632
Psp6I	CCWGG	3 cut(s)	240, 246, 523
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	3 cut(s)	240, 246, 523
PspN4I	GGNNCC	4 cut(s)	137, 553, 570, 784
PspPI	GGNCC	2 cut(s)	244, 783
PstNI	CAGNNNCTG	2 cut(s)	18, 680
PsuI	RGATCY	1 cut(s)	551
PsyI	GACNNNGTC	1 cut(s)	740
RsaI	GTAC	1 cut(s)	16
RsaNI	GTAC	1 cut(s)	15
RseI	CAYNNNNRTG	2 cut(s)	525, 631
SaqAI	TTAA	3 cut(s)	389, 465, 612
SatI	GCNGC	4 cut(s)	125, 276, 332, 335
Sau3AI	GATC	2 cut(s)	162, 551
Sau96I	GGNCC	2 cut(s)	244, 783
SchI	GAGTC	1 cut(s)	671
ScrFI	CCNGG	3 cut(s)	242, 248, 525
SduI	GDGCHC	1 cut(s)	78
SfaNI	GCATC	1 cut(s)	679
SfoI	GGCGCC	1 cut(s)	137
SinI	GGWCC	2 cut(s)	244, 783
SmiMI	CAYNNNNRTG	2 cut(s)	525, 631
SmlI	CTYRAG	3 cut(s)	140, 456, 611
SmoI	CTYRAG	3 cut(s)	140, 456, 611
Sse9I	AATT	7 cut(s)	145, 167, 251, 268, 323, 462, 790
SsiI	CCGC	2 cut(s)	124, 536
SspDI	GGCGCC	1 cut(s)	135
SspMI	CTAG	2 cut(s)	318, 773
StyD4I	CCNGG	3 cut(s)	240, 246, 523
TaaI	ACNGT	4 cut(s)	14, 49, 544, 702
TaqII	GACCGA	1 cut(s)	439
TasI	AATT	7 cut(s)	145, 167, 251, 268, 323, 462, 790
TauI	GCSGC	1 cut(s)	127
Tru1I	TTAA	3 cut(s)	389, 465, 612
Tru9I	TTAA	3 cut(s)	389, 465, 612
TscAI	CASTG	1 cut(s)	424
TseI	GCWGC	3 cut(s)	275, 331, 334
TspDTI	ATGAA	6 cut(s)	23, 240, 368, 469, 744, 803
TspGWI	ACGGA	1 cut(s)	717
TspRI	CASTG	1 cut(s)	424
Tth111I	GACNNNGTC	1 cut(s)	740
Vha464I	CTTAAG	1 cut(s)	611
VneI	GTGCAC	1 cut(s)	74
VpaK11BI	GGWCC	2 cut(s)	244, 783
XapI	RAATTY	5 cut(s)	167, 251, 268, 323, 790
XceI	RCATGY	1 cut(s)	636
XmnI	GAANNNNTTC	1 cut(s)	579
XspI	CTAG	2 cut(s)	318, 773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.