Prupe.6G188400_v2.0.a1

Protein SENSITIVE TO PROTON RHIZOTOXICITY

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
19660821 .. 19664595
3775 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G188400.1

Sequence Viewer

Length: 1047 bp
ATGTCGTTCACCGGTCAACCGTTAAACATCCCCGCGGCTTGTTCCGTCGCGCCAACGGCTGAAGACCCGGACCCGGAACTTCCGCTCCGGAATCTGTCGATGGTCCGAACGAGAATGGATTTGCTGCAGTGCTTCCTCACCGAATCGATCAACACCAACGCTCTGATCAGCAAGGACCAGATGGACATGGTCTCAGCCGGAATCGCCTCTGCGATCCGCGAAATCATCTCAAACGGTGCCGCTTTGTTGGCCTGCTCTCAGAACCCGGGACCCGCATCCGACCAGACCCGAACACCCGCCGCCAACAACGAAGTAGCTACAGAGGTCAAGAAAGAGGAAGAGAACGATTTCCAAAACGACGACGCAGAGGGCGAGATCGTGGAGGTGGACGCGATGGAGCTGCTGGCGGAGCACATCCACTACTGCGAGATTTGCGGGAAGGGGTTCAAGCGAGACGCGAATTTGAGGATGCACATGCGGGCTCACGGGAACCGGTTCAAGACGCCCGAGGCCTTGGCCAAACCAGACAAGAACCCGGCCGAGCCGAGCCGGAAGACCCGGTTCTCGTGCCCCTATATCGGGTGCAACCGAAACAAGGGGCACGTGAAGTTCCGGGCGCTGAAATCGGTGATCTGCGTGAAGAATCACTTCAAGCGAAGCCACTGCCCGAAGATGTACTCGTGCAATCGCTGCAACAAGAAGAGCTTTTCGGTCGTGGCGGATTTGAAGAGCCACCTGAAGCACTGCGGCGAGGCGCGGTGGCGCTGCACGTGCGGCACGAGCTTCTCGAGGAAGAGCAAGCTGTTTGGGCACATGGCCTTGTTTGAAGGGCACATGCCGGCGGTTGAGGACGAGAAGAGTGTTAAGGCTGCGACGGCTATGGATCAGGATGAGGATGAGGAGGAAGAGGTGGAGGAGAATACGACGTCGTTTGAAGGACGGGAAATGGGGTCGAATTTTTTTGAGGATACTGAATTTTCTGAGTTGCTTGGAGGGTTTGGTTCCATTGATGGGTATTTTTTGGACGATATGTTGGTGGACTTGTGA

Protein Analysis

349

Amino Acids

38.74

Weight (kDa)

5.4

Isoelectric Point (pI)

45.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015523)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 929
AccB1I GGYRCC 1 cut(s) 236
AccBSI CCGCTC 1 cut(s) 85
AccII CGCG 6 cut(s) 35, 50, 219, 392, 458, 757
AccIII TCCGGA 1 cut(s) 87
AclWI GGATC 2 cut(s) 208, 891
AcoI YGGCCR 2 cut(s) 516, 537
AcsI RAATTY 3 cut(s) 460, 955, 974
AcuI CTGAAG 2 cut(s) 81, 758
AcvI CACGTG 2 cut(s) 604, 771
AcyI GRCGYC 2 cut(s) 503, 926
AfaI GTAC 1 cut(s) 677
AfiI CCNNNNNNNGG 5 cut(s) 73, 578, 579, 595, 1011
AgeI ACCGGT 2 cut(s) 11, 492
AgsI TTSAA 6 cut(s) 448, 499, 652, 727, 827, 935
AloI GAACNNNNNNTCC 2 cut(s) 69, 101
AluBI AGCT 5 cut(s) 317, 400, 705, 783, 802
AluI AGCT 5 cut(s) 317, 400, 705, 783, 802
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 2 cut(s) 196, 447
AlwI GGATC 2 cut(s) 208, 891
Ama87I CYCGRG 3 cut(s) 265, 506, 787
Aor13HI TCCGGA 1 cut(s) 87
AoxI GGCC 5 cut(s) 249, 510, 516, 537, 816
ApeKI GCWGC 5 cut(s) 124, 400, 690, 765, 869
ApoI RAATTY 3 cut(s) 460, 955, 974
AsiGI ACCGGT 2 cut(s) 11, 492
Asp700I GAANNNNTTC 4 cut(s) 347, 443, 494, 647
AspLEI GCGC 4 cut(s) 52, 619, 757, 765
AspS9I GGNCC 4 cut(s) 70, 103, 175, 269
AsuC2I CCSGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
AsuHPI GGTGA 2 cut(s) 130, 640
AvaI CYCGRG 3 cut(s) 265, 506, 787
AvaII GGWCC 4 cut(s) 70, 103, 175, 269
BaeGI GKGCMC 4 cut(s) 572, 603, 813, 834
BalI TGGCCA 1 cut(s) 518
BanI GGYRCC 1 cut(s) 236
BanII GRGCYC 1 cut(s) 484
BauI CACGAG 3 cut(s) 565, 679, 778
BbrPI CACGTG 2 cut(s) 604, 771
BbsI GAAGAC 2 cut(s) 69, 560
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 5 cut(s) 111, 387, 677, 752, 856
BccI CCATC 4 cut(s) 94, 175, 388, 1004
BceAI ACGGC 2 cut(s) 72, 891
BcgI CGANNNNNNTGC 4 cut(s) 382, 416, 645, 679
BciVI GTATCC 1 cut(s) 961
BclI TGATCA 1 cut(s) 165
BcnI CCSGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
BcoDI GTCTC 2 cut(s) 196, 447
BfmI CTRYAG 2 cut(s) 125, 318
BfoI RGCGCY 2 cut(s) 620, 766
BfuI GTATCC 1 cut(s) 961
Bme1390I CCNGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
Bme18I GGWCC 4 cut(s) 70, 103, 175, 269
BmeT110I CYCGRG 3 cut(s) 265, 506, 787
BmgT120I GGNCC 4 cut(s) 70, 103, 175, 269
BmiI GGNNCC 6 cut(s) 72, 238, 270, 271, 491, 1003
BmrFI CCNGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
BmsI GCATC 2 cut(s) 284, 459
BpiI GAAGAC 2 cut(s) 69, 560
BpuMI CCSGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
Bsa29I ATCGAT 1 cut(s) 146
BsaAI YACGTR 2 cut(s) 604, 771
BsaHI GRCGYC 2 cut(s) 503, 926
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 4 cut(s) 33, 265, 507, 513
BsaWI WCCGGW 3 cut(s) 11, 87, 492
BsaXI ACNNNNNCTCC 2 cut(s) 69, 99
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 578, 579, 595, 1011
Bse118I RCCGGY 3 cut(s) 11, 492, 838
BseAI TCCGGA 1 cut(s) 87
BseCI ATCGAT 1 cut(s) 146
BseDI CCNNGG 4 cut(s) 33, 265, 507, 513
BseGI GGATG 6 cut(s) 27, 275, 414, 474, 895, 901
BseLI CCNNNNNNNGG 5 cut(s) 73, 578, 579, 595, 1011
BseMII CTCAG 3 cut(s) 207, 272, 972
BseRI GAGGAG 2 cut(s) 914, 929
BseSI GKGCMC 4 cut(s) 572, 603, 813, 834
BseX3I CGGCCG 1 cut(s) 537
BseXI GCAGC 5 cut(s) 111, 387, 677, 752, 856
BsgI GTGCAG 1 cut(s) 751
Bsh1236I CGCG 6 cut(s) 35, 50, 219, 392, 458, 757
Bsh1285I CGRYCG 2 cut(s) 540, 714
BshFI GGCC 5 cut(s) 251, 512, 518, 539, 818
BshNI GGYRCC 1 cut(s) 236
BshTI ACCGGT 2 cut(s) 11, 492
BshVI ATCGAT 1 cut(s) 146
BsiEI CGRYCG 2 cut(s) 540, 714
BsiHKAI GWGCWC 1 cut(s) 414
BsiHKCI CYCGRG 3 cut(s) 265, 506, 787
BslFI GGGAC 1 cut(s) 282
BslI CCNNNNNNNGG 5 cut(s) 73, 578, 579, 595, 1011
BsmAI GTCTC 2 cut(s) 196, 447
BsmBI CGTCTC 1 cut(s) 447
BsmFI GGGAC 1 cut(s) 282
BsnI GGCC 5 cut(s) 251, 512, 518, 539, 818
Bso31I GGTCTC 1 cut(s) 196
BsoBI CYCGRG 3 cut(s) 265, 506, 787
Bsp1286I GDGCHC 6 cut(s) 414, 484, 572, 603, 813, 834
Bsp13I TCCGGA 1 cut(s) 87
Bsp143I GATC 6 cut(s) 147, 165, 213, 375, 630, 883
BspANI GGCC 5 cut(s) 251, 512, 518, 539, 818
BspCNI CTCAG 3 cut(s) 206, 271, 973
BspDI ATCGAT 1 cut(s) 146
BspEI TCCGGA 1 cut(s) 87
BspFNI CGCG 6 cut(s) 35, 50, 219, 392, 458, 757
BspLI GGNNCC 6 cut(s) 72, 238, 270, 271, 491, 1003
BspMAI CTGCAG 1 cut(s) 129
BspPI GGATC 2 cut(s) 208, 891
BspQI GCTCTTC 3 cut(s) 695, 722, 788
BspT107I GGYRCC 1 cut(s) 236
BspTNI GGTCTC 1 cut(s) 196
BsrBI CCGCTC 1 cut(s) 85
BsrFI RCCGGY 3 cut(s) 11, 492, 838
BssAI RCCGGY 3 cut(s) 11, 492, 838
BssECI CCNNGG 4 cut(s) 33, 265, 507, 513
BssMI GATC 6 cut(s) 147, 165, 213, 375, 630, 883
BssNI GRCGYC 2 cut(s) 503, 926
BssSI CACGAG 3 cut(s) 565, 679, 778
BssT1I CCWWGG 1 cut(s) 513
Bst2BI CACGAG 3 cut(s) 565, 679, 778
Bst4CI ACNGT 2 cut(s) 21, 236
Bst6I CTCTTC 6 cut(s) 333, 695, 722, 788, 851, 900
BstACI GRCGYC 2 cut(s) 503, 926
BstAPI GCANNNNNTGC 1 cut(s) 690
BstBAI YACGTR 2 cut(s) 604, 771
BstC8I GCNNGC 5 cut(s) 253, 405, 480, 800, 840
BstDEI CTNAG 3 cut(s) 193, 258, 981
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 6 cut(s) 27, 275, 414, 474, 895, 901
BstFNI CGCG 6 cut(s) 35, 50, 219, 392, 458, 757
BstH2I RGCGCY 2 cut(s) 620, 766
BstHHI GCGC 4 cut(s) 52, 619, 757, 765
BstKTI GATC 6 cut(s) 150, 168, 216, 378, 633, 886
BstMAI GTCTC 2 cut(s) 196, 447
BstMBI GATC 6 cut(s) 147, 165, 213, 375, 630, 883
BstMCI CGRYCG 2 cut(s) 540, 714
BstNSI RCATGY 2 cut(s) 478, 838
BstSCI CCNGG 7 cut(s) 66, 72, 264, 265, 534, 557, 612
BstSFI CTRYAG 2 cut(s) 125, 318
BstSLI GKGCMC 4 cut(s) 572, 603, 813, 834
BstUI CGCG 6 cut(s) 35, 50, 219, 392, 458, 757
BstV1I GCAGC 5 cut(s) 111, 387, 677, 752, 856
BstV2I GAAGAC 2 cut(s) 69, 560
BstZI CGGCCG 1 cut(s) 537
Bsu15I ATCGAT 1 cut(s) 146
BsuI GTATCC 1 cut(s) 961
BsuRI GGCC 5 cut(s) 251, 512, 518, 539, 818
BsuTUI ATCGAT 1 cut(s) 146
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 407
BtsCI GGATG 6 cut(s) 27, 275, 414, 474, 895, 901
BtsI GCAGTG 3 cut(s) 134, 661, 742
BtsIMutI CAGTG 3 cut(s) 134, 661, 742
Cac8I GCNNGC 5 cut(s) 253, 405, 480, 800, 840
CfoI GCGC 4 cut(s) 52, 619, 757, 765
Cfr10I RCCGGY 3 cut(s) 11, 492, 838
Cfr13I GGNCC 4 cut(s) 70, 103, 175, 269
Cfr42I CCGCGG 1 cut(s) 36
Cfr9I CCCGGG 1 cut(s) 265
ClaI ATCGAT 1 cut(s) 146
CseI GACGC 4 cut(s) 371, 398, 464, 511
Csp6I GTAC 1 cut(s) 676
CspAI ACCGGT 2 cut(s) 11, 492
CviAII CATG 4 cut(s) 187, 475, 814, 835
CviQI GTAC 1 cut(s) 676
DdeI CTNAG 3 cut(s) 193, 258, 981
DpnI GATC 6 cut(s) 149, 167, 215, 377, 632, 885
DpnII GATC 6 cut(s) 147, 165, 213, 375, 630, 883
EaeI YGGCCR 2 cut(s) 516, 537
EagI CGGCCG 1 cut(s) 537
Eam1104I CTCTTC 6 cut(s) 333, 695, 722, 788, 851, 900
EarI CTCTTC 6 cut(s) 333, 695, 722, 788, 851, 900
EciI GGCGGA 2 cut(s) 422, 734
EclXI CGGCCG 1 cut(s) 537
Eco130I CCWWGG 1 cut(s) 513
Eco147I AGGCCT 1 cut(s) 512
Eco24I GRGCYC 1 cut(s) 484
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 4 cut(s) 70, 103, 175, 269
Eco52I CGGCCG 1 cut(s) 537
Eco57I CTGAAG 2 cut(s) 81, 758
Eco72I CACGTG 2 cut(s) 604, 771
Eco88I CYCGRG 3 cut(s) 265, 506, 787
EcoO109I RGGNCCY 1 cut(s) 269
EcoT14I CCWWGG 1 cut(s) 513
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 1 cut(s) 513
Esp3I CGTCTC 1 cut(s) 447
FaeI CATG 4 cut(s) 190, 478, 817, 838
FaiI YATR 7 cut(s) 188, 476, 576, 815, 836, 881, 1031
FalI AAGNNNNNCTT 4 cut(s) 632, 664, 689, 721
FaqI GGGAC 1 cut(s) 282
FatI CATG 4 cut(s) 186, 474, 813, 834
FauI CCCGC 5 cut(s) 40, 280, 304, 428, 471
FbaI TGATCA 1 cut(s) 165
FokI GGATG 6 cut(s) 14, 262, 401, 481, 902, 908
FriOI GRGCYC 1 cut(s) 484
GlaI GCGC 4 cut(s) 51, 618, 756, 764
HaeII RGCGCY 2 cut(s) 620, 766
HaeIII GGCC 5 cut(s) 251, 512, 518, 539, 818
HgaI GACGC 4 cut(s) 371, 398, 464, 511
HhaI GCGC 4 cut(s) 52, 619, 757, 765
Hin1I GRCGYC 2 cut(s) 503, 926
Hin1II CATG 4 cut(s) 190, 478, 817, 838
Hin6I GCGC 4 cut(s) 50, 617, 755, 763
HinP1I GCGC 4 cut(s) 50, 617, 755, 763
HincII GTYRAC 1 cut(s) 17
HindII GTYRAC 1 cut(s) 17
HinfI GANTC 4 cut(s) 91, 143, 201, 643
HphI GGTGA 2 cut(s) 130, 640
Hpy166II GTNNAC 4 cut(s) 9, 17, 388, 1039
Hpy188I TCNGA 5 cut(s) 107, 165, 261, 280, 982
Hpy188III TCNNGA 5 cut(s) 88, 328, 499, 787, 887
Hpy8I GTNNAC 4 cut(s) 9, 17, 388, 1039
Hpy99I CGWCG 6 cut(s) 50, 362, 365, 877, 928, 931
HpyAV CCTTC 3 cut(s) 433, 821, 929
HpyCH4III ACNGT 2 cut(s) 21, 236
HpyCH4IV ACGT 3 cut(s) 603, 770, 926
HpyCH4V TGCA 6 cut(s) 127, 472, 585, 684, 693, 768
HpyF3I CTNAG 3 cut(s) 193, 258, 981
HpySE526I ACGT 3 cut(s) 603, 770, 926
Hsp92I GRCGYC 2 cut(s) 503, 926
Hsp92II CATG 4 cut(s) 190, 478, 817, 838
HspAI GCGC 4 cut(s) 50, 617, 755, 763
KflI GGGWCCC 1 cut(s) 269
Kpn2I TCCGGA 1 cut(s) 87
KroI GCCGGC 1 cut(s) 838
KroNI GCCGGC 1 cut(s) 840
Ksp22I TGATCA 1 cut(s) 165
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 6 cut(s) 147, 165, 213, 375, 630, 883
LguI GCTCTTC 3 cut(s) 695, 722, 788
LmnI GCTCC 3 cut(s) 90, 397, 409
Lsp1109I GCAGC 5 cut(s) 111, 387, 677, 752, 856
LweI GCATC 2 cut(s) 284, 459
MaeII ACGT 3 cut(s) 603, 770, 926
MalI GATC 6 cut(s) 149, 167, 215, 377, 632, 885
MbiI CCGCTC 1 cut(s) 85
MboI GATC 6 cut(s) 147, 165, 213, 375, 630, 883
MhlI GDGCHC 6 cut(s) 414, 484, 572, 603, 813, 834
MlsI TGGCCA 1 cut(s) 518
MluCI AATT 3 cut(s) 460, 955, 974
MluNI TGGCCA 1 cut(s) 518
MmeI TCCRAC 1 cut(s) 303
Mox20I TGGCCA 1 cut(s) 518
MroI TCCGGA 1 cut(s) 87
MroNI GCCGGC 1 cut(s) 838
MroXI GAANNNNTTC 4 cut(s) 347, 443, 494, 647
MscI TGGCCA 1 cut(s) 518
MseI TTAA 2 cut(s) 23, 864
Msp20I TGGCCA 1 cut(s) 518
MspA1I CMGCKG 1 cut(s) 35
MspR9I CCNGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
MvnI CGCG 6 cut(s) 35, 50, 219, 392, 458, 757
NaeI GCCGGC 1 cut(s) 840
NciI CCSGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
NdeII GATC 6 cut(s) 147, 165, 213, 375, 630, 883
NgoMIV GCCGGC 1 cut(s) 838
NlaIII CATG 4 cut(s) 190, 478, 817, 838
NlaIV GGNNCC 6 cut(s) 72, 238, 270, 271, 491, 1003
NmeAIII GCCGAG 2 cut(s) 565, 570
NspI RCATGY 2 cut(s) 478, 838
PaeR7I CTCGAG 1 cut(s) 787
PceI AGGCCT 1 cut(s) 512
PciSI GCTCTTC 3 cut(s) 695, 722, 788
PcsI WCGNNNNNNNCGW 3 cut(s) 369, 776, 785
PdiI GCCGGC 1 cut(s) 840
PdmI GAANNNNTTC 4 cut(s) 347, 443, 494, 647
PfeI GAWTC 4 cut(s) 91, 143, 201, 643
PflFI GACNNNGTC 1 cut(s) 188
PinAI ACCGGT 2 cut(s) 11, 492
PmaCI CACGTG 2 cut(s) 604, 771
PmlI CACGTG 2 cut(s) 604, 771
Ppu21I YACGTR 2 cut(s) 604, 771
PpuMI RGGWCCY 1 cut(s) 269
Psp5II RGGWCCY 1 cut(s) 269
PspCI CACGTG 2 cut(s) 604, 771
PspN4I GGNNCC 6 cut(s) 72, 238, 270, 271, 491, 1003
PspPI GGNCC 4 cut(s) 70, 103, 175, 269
PspPPI RGGWCCY 1 cut(s) 269
PstI CTGCAG 1 cut(s) 129
PsyI GACNNNGTC 1 cut(s) 188
RsaI GTAC 1 cut(s) 677
RsaNI GTAC 1 cut(s) 676
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 3 cut(s) 695, 722, 788
SaqAI TTAA 2 cut(s) 23, 864
Sau3AI GATC 6 cut(s) 147, 165, 213, 375, 630, 883
Sau96I GGNCC 4 cut(s) 70, 103, 175, 269
ScrFI CCNGG 7 cut(s) 68, 74, 266, 267, 536, 559, 614
SduI GDGCHC 6 cut(s) 414, 484, 572, 603, 813, 834
SfaNI GCATC 2 cut(s) 284, 459
SfcI CTRYAG 2 cut(s) 125, 318
Sfr274I CTCGAG 1 cut(s) 787
Sfr303I CCGCGG 1 cut(s) 36
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 4 cut(s) 70, 103, 175, 269
SlaI CTCGAG 1 cut(s) 787
SmaI CCCGGG 1 cut(s) 267
SmlI CTYRAG 1 cut(s) 787
SmoI CTYRAG 1 cut(s) 787
Sse9I AATT 3 cut(s) 460, 955, 974
SseBI AGGCCT 1 cut(s) 512
StuI AGGCCT 1 cut(s) 512
StyD4I CCNGG 7 cut(s) 66, 72, 264, 265, 534, 557, 612
StyI CCWWGG 1 cut(s) 513
TaaI ACNGT 2 cut(s) 21, 236
TaiI ACGT 3 cut(s) 606, 773, 929
TaqI TCGA 4 cut(s) 98, 146, 788, 953
TaqII GACCGA 1 cut(s) 700
TasI AATT 3 cut(s) 460, 955, 974
TatI WGTACW 1 cut(s) 675
TauI GCSGC 5 cut(s) 38, 242, 302, 750, 777
TfiI GAWTC 4 cut(s) 91, 143, 201, 643
Tru1I TTAA 2 cut(s) 23, 864
Tru9I TTAA 2 cut(s) 23, 864
TscAI CASTG 3 cut(s) 134, 668, 749
TseI GCWGC 5 cut(s) 124, 400, 690, 765, 869
TspGWI ACGGA 1 cut(s) 34
TspMI CCCGGG 1 cut(s) 265
TspRI CASTG 3 cut(s) 134, 668, 749
Tth111I GACNNNGTC 1 cut(s) 188
VpaK11BI GGWCC 4 cut(s) 70, 103, 175, 269
XapI RAATTY 3 cut(s) 460, 955, 974
XceI RCATGY 2 cut(s) 478, 838
XhoI CTCGAG 1 cut(s) 787
XmaI CCCGGG 1 cut(s) 265
XmnI GAANNNNTTC 4 cut(s) 347, 443, 494, 647
ZraI GACGTC 1 cut(s) 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.