Protein SENSITIVE TO PROTON RHIZOTOXICITY
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g20670 |
| malus_domestica | MD01G1032000.v1.1 MD15G1323400.v1.1 |
| prunus_persica | Prupe.6G188400_v2.0.a1 |
| pyrus_communis | pycom01g05930 |
| rosa_chinensis | RchiOBHm_Chr2g0113111 |
| rosa_laevigata | RLG00000018044 |
| rosa_multiflora | Rmu_sc0005949.1_g000014 Rmu_sc0039502.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00129630 Rroxscaffold_2G00129700 |
| rosa_rugosa | Rorug02G0185300 |
| rosa_samantha | Rh2AG239700 Rh2CG243800 Rh2DG247600 |
| rosa_wichuraiana | Rw2G018760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 65 |
| AatII | GACGTC | 1 cut(s) | 315 |
| AccB1I | GGYRCC | 2 cut(s) | 224, 842 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 169 |
| AccBSI | CCGCTC | 1 cut(s) | 73 |
| AccI | GTMKAC | 3 cut(s) | 315, 345, 515 |
| AccII | CGCG | 7 cut(s) | 350, 411, 416, 538, 584, 736, 848 |
| AccIII | TCCGGA | 1 cut(s) | 463 |
| AclWI | GGATC | 1 cut(s) | 997 |
| AcoI | YGGCCR | 1 cut(s) | 819 |
| AcsI | RAATTY | 2 cut(s) | 418, 587 |
| AcuI | CTGAAG | 3 cut(s) | 8, 620, 737 |
| AcyI | GRCGYC | 3 cut(s) | 225, 312, 843 |
| AfaI | GTAC | 2 cut(s) | 554, 656 |
| AfeI | AGCGCT | 1 cut(s) | 471 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 169, 557, 574, 817 |
| AgsI | TTSAA | 4 cut(s) | 406, 457, 631, 706 |
| AjnI | CCWGG | 1 cut(s) | 10 |
| AluBI | AGCT | 4 cut(s) | 118, 358, 762, 781 |
| AluI | AGCT | 4 cut(s) | 118, 358, 762, 781 |
| Alw21I | GWGCWC | 2 cut(s) | 372, 749 |
| Alw26I | GTCTC | 2 cut(s) | 184, 318 |
| Alw44I | GTGCAC | 1 cut(s) | 745 |
| AlwI | GGATC | 1 cut(s) | 997 |
| Ama87I | CYCGRG | 3 cut(s) | 61, 278, 766 |
| Aor13HI | TCCGGA | 1 cut(s) | 463 |
| Aor51HI | AGCGCT | 1 cut(s) | 471 |
| AoxI | GGCC | 5 cut(s) | 13, 808, 819, 912, 938 |
| ApaLI | GTGCAC | 1 cut(s) | 745 |
| ApeKI | GCWGC | 1 cut(s) | 358 |
| ApoI | RAATTY | 2 cut(s) | 418, 587 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 626 |
| AspLEI | GCGC | 7 cut(s) | 227, 411, 472, 598, 736, 799, 845 |
| AspS9I | GGNCC | 3 cut(s) | 58, 91, 808 |
| AsuC2I | CCSGG | 3 cut(s) | 56, 271, 593 |
| AsuHPI | GGTGA | 5 cut(s) | 118, 148, 518, 619, 938 |
| AvaI | CYCGRG | 3 cut(s) | 61, 278, 766 |
| AvaII | GGWCC | 2 cut(s) | 58, 91 |
| BaeGI | GKGCMC | 4 cut(s) | 551, 582, 749, 792 |
| BanI | GGYRCC | 2 cut(s) | 224, 842 |
| BanII | GRGCYC | 1 cut(s) | 442 |
| BauI | CACGAG | 4 cut(s) | 544, 658, 757, 916 |
| Bbv12I | GWGCWC | 2 cut(s) | 372, 749 |
| BbvI | GCAGC | 1 cut(s) | 345 |
| BccI | CCATC | 4 cut(s) | 143, 163, 209, 884 |
| BceAI | ACGGC | 7 cut(s) | 51, 238, 334, 460, 806, 879, 927 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 766, 800 |
| BciT130I | CCWGG | 1 cut(s) | 12 |
| BclI | TGATCA | 1 cut(s) | 153 |
| BcnI | CCSGG | 3 cut(s) | 56, 271, 593 |
| BcoDI | GTCTC | 2 cut(s) | 184, 318 |
| BfoI | RGCGCY | 5 cut(s) | 228, 473, 599, 800, 846 |
| BisI | GCNGC | 7 cut(s) | 228, 359, 394, 523, 727, 754, 846 |
| BlsI | GCNGC | 7 cut(s) | 229, 360, 395, 524, 728, 755, 847 |
| Bme1390I | CCNGG | 4 cut(s) | 12, 56, 271, 593 |
| Bme18I | GGWCC | 2 cut(s) | 58, 91 |
| BmeT110I | CYCGRG | 3 cut(s) | 61, 278, 766 |
| BmgT120I | GGNCC | 3 cut(s) | 58, 91, 808 |
| BmiI | GGNNCC | 4 cut(s) | 60, 226, 638, 844 |
| BmrFI | CCNGG | 4 cut(s) | 12, 56, 271, 593 |
| BmsI | GCATC | 3 cut(s) | 198, 258, 417 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 57, 89 |
| BpmI | CTGGAG | 2 cut(s) | 59, 98 |
| BpuMI | CCSGG | 3 cut(s) | 56, 271, 593 |
| BsaHI | GRCGYC | 3 cut(s) | 225, 312, 843 |
| BsaI | GGTCTC | 1 cut(s) | 184 |
| BsaJI | CCNNGG | 3 cut(s) | 279, 442, 822 |
| BsaWI | WCCGGW | 1 cut(s) | 463 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 164, 194, 628, 658, 959, 989, 1004, 1034 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 169, 557, 574, 817 |
| Bse118I | RCCGGY | 4 cut(s) | 185, 494, 518, 817 |
| Bse1I | ACTGG | 1 cut(s) | 451 |
| BseAI | TCCGGA | 1 cut(s) | 463 |
| BseBI | CCWGG | 1 cut(s) | 12 |
| BseDI | CCNNGG | 3 cut(s) | 279, 442, 822 |
| BseGI | GGATG | 5 cut(s) | 201, 249, 372, 432, 895 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 169, 557, 574, 817 |
| BseNI | ACTGG | 1 cut(s) | 451 |
| BseRI | GAGGAG | 5 cut(s) | 184, 890, 893, 896, 899 |
| BseSI | GKGCMC | 4 cut(s) | 551, 582, 749, 792 |
| BseX3I | CGGCCG | 1 cut(s) | 819 |
| BseXI | GCAGC | 1 cut(s) | 345 |
| Bsh1236I | CGCG | 7 cut(s) | 350, 411, 416, 538, 584, 736, 848 |
| Bsh1285I | CGRYCG | 1 cut(s) | 822 |
| BshFI | GGCC | 5 cut(s) | 15, 810, 821, 914, 940 |
| BshNI | GGYRCC | 2 cut(s) | 224, 842 |
| BsiEI | CGRYCG | 1 cut(s) | 822 |
| BsiHKAI | GWGCWC | 2 cut(s) | 372, 749 |
| BsiHKCI | CYCGRG | 3 cut(s) | 61, 278, 766 |
| BsiSI | CCGG | 9 cut(s) | 56, 186, 271, 464, 482, 495, 519, 592, 818 |
| BsiWI | CGTACG | 1 cut(s) | 552 |
| BslFI | GGGAC | 1 cut(s) | 53 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 169, 557, 574, 817 |
| BsmAI | GTCTC | 2 cut(s) | 184, 318 |
| BsmFI | GGGAC | 1 cut(s) | 53 |
| BsnI | GGCC | 5 cut(s) | 15, 810, 821, 914, 940 |
| Bso31I | GGTCTC | 1 cut(s) | 184 |
| BsoBI | CYCGRG | 3 cut(s) | 61, 278, 766 |
| Bsp1286I | GDGCHC | 6 cut(s) | 372, 442, 551, 582, 749, 792 |
| Bsp13I | TCCGGA | 1 cut(s) | 463 |
| Bsp143I | GATC | 3 cut(s) | 153, 333, 989 |
| BspANI | GGCC | 5 cut(s) | 15, 810, 821, 914, 940 |
| BspEI | TCCGGA | 1 cut(s) | 463 |
| BspFNI | CGCG | 7 cut(s) | 350, 411, 416, 538, 584, 736, 848 |
| BspLI | GGNNCC | 4 cut(s) | 60, 226, 638, 844 |
| BspPI | GGATC | 1 cut(s) | 997 |
| BspQI | GCTCTTC | 3 cut(s) | 125, 701, 767 |
| BspT107I | GGYRCC | 2 cut(s) | 224, 842 |
| BspTNI | GGTCTC | 1 cut(s) | 184 |
| BsrBI | CCGCTC | 1 cut(s) | 73 |
| BsrFI | RCCGGY | 4 cut(s) | 185, 494, 518, 817 |
| BsrI | ACTGG | 1 cut(s) | 451 |
| BssAI | RCCGGY | 4 cut(s) | 185, 494, 518, 817 |
| BssECI | CCNNGG | 3 cut(s) | 279, 442, 822 |
| BssMI | GATC | 3 cut(s) | 153, 333, 989 |
| BssNAI | GTATAC | 1 cut(s) | 516 |
| BssNI | GRCGYC | 3 cut(s) | 225, 312, 843 |
| BssSI | CACGAG | 4 cut(s) | 544, 658, 757, 916 |
| Bst1107I | GTATAC | 1 cut(s) | 516 |
| Bst2BI | CACGAG | 4 cut(s) | 544, 658, 757, 916 |
| Bst2UI | CCWGG | 1 cut(s) | 12 |
| Bst4CI | ACNGT | 1 cut(s) | 644 |
| Bst6I | CTCTTC | 7 cut(s) | 125, 239, 288, 674, 701, 767, 867 |
| BstACI | GRCGYC | 3 cut(s) | 225, 312, 843 |
| BstC8I | GCNNGC | 8 cut(s) | 187, 241, 363, 474, 496, 582, 779, 819 |
| BstDSI | CCRYGG | 2 cut(s) | 442, 822 |
| BstF5I | GGATG | 5 cut(s) | 201, 249, 372, 432, 895 |
| BstFNI | CGCG | 7 cut(s) | 350, 411, 416, 538, 584, 736, 848 |
| BstH2I | RGCGCY | 5 cut(s) | 228, 473, 599, 800, 846 |
| BstHHI | GCGC | 7 cut(s) | 227, 411, 472, 598, 736, 799, 845 |
| BstKTI | GATC | 3 cut(s) | 156, 336, 992 |
| BstMAI | GTCTC | 2 cut(s) | 184, 318 |
| BstMBI | GATC | 3 cut(s) | 153, 333, 989 |
| BstMCI | CGRYCG | 1 cut(s) | 822 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 236, 367, 390, 478, 753, 759, 787, 796 |
| BstNI | CCWGG | 1 cut(s) | 12 |
| BstNSI | RCATGY | 1 cut(s) | 817 |
| BstSCI | CCNGG | 4 cut(s) | 10, 54, 269, 591 |
| BstSLI | GKGCMC | 4 cut(s) | 551, 582, 749, 792 |
| BstUI | CGCG | 7 cut(s) | 350, 411, 416, 538, 584, 736, 848 |
| BstV1I | GCAGC | 1 cut(s) | 345 |
| BstX2I | RGATCY | 1 cut(s) | 989 |
| BstYI | RGATCY | 1 cut(s) | 989 |
| BstZ17I | GTATAC | 1 cut(s) | 516 |
| BstZI | CGGCCG | 1 cut(s) | 819 |
| BsuRI | GGCC | 5 cut(s) | 15, 810, 821, 914, 940 |
| BtgI | CCRYGG | 2 cut(s) | 442, 822 |
| BtsCI | GGATG | 5 cut(s) | 201, 249, 372, 432, 895 |
| BtsI | GCAGTG | 1 cut(s) | 721 |
| BtsIMutI | CAGTG | 2 cut(s) | 640, 721 |
| Cac8I | GCNNGC | 8 cut(s) | 187, 241, 363, 474, 496, 582, 779, 819 |
| CfoI | GCGC | 7 cut(s) | 227, 411, 472, 598, 736, 799, 845 |
| Cfr10I | RCCGGY | 4 cut(s) | 185, 494, 518, 817 |
| Cfr13I | GGNCC | 3 cut(s) | 58, 91, 808 |
| CpoI | CGGWCCG | 1 cut(s) | 91 |
| CseI | GACGC | 2 cut(s) | 356, 422 |
| Csp6I | GTAC | 2 cut(s) | 553, 655 |
| CspI | CGGWCCG | 1 cut(s) | 91 |
| CviAII | CATG | 4 cut(s) | 175, 433, 793, 814 |
| CviQI | GTAC | 2 cut(s) | 553, 655 |
| DinI | GGCGCC | 2 cut(s) | 226, 844 |
| DpnI | GATC | 3 cut(s) | 155, 335, 991 |
| DpnII | GATC | 3 cut(s) | 153, 333, 989 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 65 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 65 |
| EaeI | YGGCCR | 1 cut(s) | 819 |
| EagI | CGGCCG | 1 cut(s) | 819 |
| Eam1104I | CTCTTC | 7 cut(s) | 125, 239, 288, 674, 701, 767, 867 |
| EarI | CTCTTC | 7 cut(s) | 125, 239, 288, 674, 701, 767, 867 |
| EciI | GGCGGA | 6 cut(s) | 172, 187, 336, 380, 540, 713 |
| EclXI | CGGCCG | 1 cut(s) | 819 |
| Eco24I | GRGCYC | 1 cut(s) | 442 |
| Eco31I | GGTCTC | 1 cut(s) | 184 |
| Eco47I | GGWCC | 2 cut(s) | 58, 91 |
| Eco47III | AGCGCT | 1 cut(s) | 471 |
| Eco52I | CGGCCG | 1 cut(s) | 819 |
| Eco57I | CTGAAG | 3 cut(s) | 8, 620, 737 |
| Eco88I | CYCGRG | 3 cut(s) | 61, 278, 766 |
| EcoRII | CCWGG | 1 cut(s) | 10 |
| EcoT38I | GRGCYC | 1 cut(s) | 442 |
| EgeI | GGCGCC | 2 cut(s) | 226, 844 |
| EheI | GGCGCC | 2 cut(s) | 226, 844 |
| FaeI | CATG | 4 cut(s) | 178, 436, 796, 817 |
| FaiI | YATR | 8 cut(s) | 176, 434, 516, 794, 815, 869, 948, 1019 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 611, 643 |
| FaqI | GGGAC | 1 cut(s) | 53 |
| FatI | CATG | 4 cut(s) | 174, 432, 792, 813 |
| FauI | CCCGC | 2 cut(s) | 78, 254 |
| FbaI | TGATCA | 1 cut(s) | 153 |
| FblI | GTMKAC | 3 cut(s) | 315, 345, 515 |
| Fnu4HI | GCNGC | 7 cut(s) | 228, 359, 394, 523, 727, 754, 846 |
| FokI | GGATG | 5 cut(s) | 188, 236, 359, 439, 902 |
| FriOI | GRGCYC | 1 cut(s) | 442 |
| Fsp4HI | GCNGC | 7 cut(s) | 228, 359, 394, 523, 727, 754, 846 |
| GlaI | GCGC | 7 cut(s) | 226, 410, 471, 597, 735, 798, 844 |
| GluI | GCNGC | 7 cut(s) | 228, 359, 394, 523, 727, 754, 846 |
| GsuI | CTGGAG | 2 cut(s) | 59, 98 |
| HaeII | RGCGCY | 5 cut(s) | 228, 473, 599, 800, 846 |
| HaeIII | GGCC | 5 cut(s) | 15, 810, 821, 914, 940 |
| HapII | CCGG | 9 cut(s) | 56, 186, 271, 464, 482, 495, 519, 592, 818 |
| HgaI | GACGC | 2 cut(s) | 356, 422 |
| HhaI | GCGC | 7 cut(s) | 227, 411, 472, 598, 736, 799, 845 |
| Hin1I | GRCGYC | 3 cut(s) | 225, 312, 843 |
| Hin1II | CATG | 4 cut(s) | 178, 436, 796, 817 |
| Hin6I | GCGC | 7 cut(s) | 225, 409, 470, 596, 734, 797, 843 |
| HinP1I | GCGC | 7 cut(s) | 225, 409, 470, 596, 734, 797, 843 |
| HincII | GTYRAC | 2 cut(s) | 316, 346 |
| HindII | GTYRAC | 2 cut(s) | 316, 346 |
| HinfI | GANTC | 7 cut(s) | 66, 79, 86, 107, 326, 460, 622 |
| HpaII | CCGG | 9 cut(s) | 56, 186, 271, 464, 482, 495, 519, 592, 818 |
| HphI | GGTGA | 5 cut(s) | 118, 148, 518, 619, 938 |
| Hpy166II | GTNNAC | 4 cut(s) | 316, 346, 516, 747 |
| Hpy188I | TCNGA | 5 cut(s) | 49, 95, 331, 648, 967 |
| Hpy188III | TCNNGA | 7 cut(s) | 31, 76, 83, 286, 457, 464, 766 |
| Hpy8I | GTNNAC | 4 cut(s) | 316, 346, 516, 747 |
| Hpy99I | CGWCG | 9 cut(s) | 37, 53, 311, 314, 317, 320, 350, 416, 560 |
| HpyAV | CCTTC | 1 cut(s) | 916 |
| HpyCH4III | ACNGT | 1 cut(s) | 644 |
| HpyCH4IV | ACGT | 2 cut(s) | 312, 555 |
| HpyCH4V | TGCA | 4 cut(s) | 430, 564, 672, 747 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 236, 367, 390, 478, 753, 759, 787, 796 |
| HpySE526I | ACGT | 2 cut(s) | 312, 555 |
| Hsp92I | GRCGYC | 3 cut(s) | 225, 312, 843 |
| Hsp92II | CATG | 4 cut(s) | 178, 436, 796, 817 |
| HspAI | GCGC | 7 cut(s) | 225, 409, 470, 596, 734, 797, 843 |
| KasI | GGCGCC | 2 cut(s) | 224, 842 |
| Kpn2I | TCCGGA | 1 cut(s) | 463 |
| KroI | GCCGGC | 3 cut(s) | 185, 494, 817 |
| KroNI | GCCGGC | 3 cut(s) | 187, 496, 819 |
| Ksp22I | TGATCA | 1 cut(s) | 153 |
| Kzo9I | GATC | 3 cut(s) | 153, 333, 989 |
| LguI | GCTCTTC | 3 cut(s) | 125, 701, 767 |
| LmnI | GCTCC | 5 cut(s) | 78, 248, 355, 367, 636 |
| Lsp1109I | GCAGC | 1 cut(s) | 345 |
| LweI | GCATC | 3 cut(s) | 198, 258, 417 |
| MaeII | ACGT | 2 cut(s) | 312, 555 |
| MaeIII | GTNAC | 1 cut(s) | 859 |
| MalI | GATC | 3 cut(s) | 155, 335, 991 |
| MbiI | CCGCTC | 1 cut(s) | 73 |
| MboI | GATC | 3 cut(s) | 153, 333, 989 |
| MflI | RGATCY | 1 cut(s) | 989 |
| MhlI | GDGCHC | 6 cut(s) | 372, 442, 551, 582, 749, 792 |
| MluCI | AATT | 3 cut(s) | 418, 587, 971 |
| Mly113I | GGCGCC | 2 cut(s) | 225, 843 |
| MlyI | GAGTC | 5 cut(s) | 75, 80, 101, 320, 454 |
| MmeI | TCCRAC | 2 cut(s) | 72, 243 |
| MroI | TCCGGA | 1 cut(s) | 463 |
| MroNI | GCCGGC | 3 cut(s) | 185, 494, 817 |
| MroXI | GAANNNNTTC | 1 cut(s) | 626 |
| MslI | CAYNNNNRTG | 1 cut(s) | 866 |
| MspI | CCGG | 9 cut(s) | 56, 186, 271, 464, 482, 495, 519, 592, 818 |
| MspR9I | CCNGG | 4 cut(s) | 12, 56, 271, 593 |
| MvaI | CCWGG | 1 cut(s) | 12 |
| MvnI | CGCG | 7 cut(s) | 350, 411, 416, 538, 584, 736, 848 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 236, 367, 390, 478, 753, 759, 787, 796 |
| NaeI | GCCGGC | 3 cut(s) | 187, 496, 819 |
| NarI | GGCGCC | 2 cut(s) | 225, 843 |
| NciI | CCSGG | 3 cut(s) | 56, 271, 593 |
| NdeII | GATC | 3 cut(s) | 153, 333, 989 |
| NgoMIV | GCCGGC | 3 cut(s) | 185, 494, 817 |
| NlaIII | CATG | 4 cut(s) | 178, 436, 796, 817 |
| NlaIV | GGNNCC | 4 cut(s) | 60, 226, 638, 844 |
| NmuCI | GTSAC | 1 cut(s) | 859 |
| NspI | RCATGY | 1 cut(s) | 817 |
| PaeR7I | CTCGAG | 1 cut(s) | 766 |
| PciSI | GCTCTTC | 3 cut(s) | 125, 701, 767 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 312, 342, 542, 764 |
| PdiI | GCCGGC | 3 cut(s) | 187, 496, 819 |
| PdmI | GAANNNNTTC | 1 cut(s) | 626 |
| PfeI | GAWTC | 2 cut(s) | 79, 622 |
| Pfl23II | CGTACG | 1 cut(s) | 552 |
| PflFI | GACNNNGTC | 3 cut(s) | 89, 176, 311 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 169 |
| PkrI | GCNGC | 7 cut(s) | 229, 360, 395, 524, 728, 755, 847 |
| PleI | GAGTC | 5 cut(s) | 74, 80, 101, 320, 454 |
| PluTI | GGCGCC | 2 cut(s) | 228, 846 |
| PpsI | GAGTC | 5 cut(s) | 74, 80, 101, 320, 454 |
| Psp6I | CCWGG | 1 cut(s) | 10 |
| PspGI | CCWGG | 1 cut(s) | 10 |
| PspLI | CGTACG | 1 cut(s) | 552 |
| PspN4I | GGNNCC | 4 cut(s) | 60, 226, 638, 844 |
| PspPI | GGNCC | 3 cut(s) | 58, 91, 808 |
| PsuI | RGATCY | 1 cut(s) | 989 |
| PsyI | GACNNNGTC | 3 cut(s) | 89, 176, 311 |
| RsaI | GTAC | 2 cut(s) | 554, 656 |
| RsaNI | GTAC | 2 cut(s) | 553, 655 |
| RseI | CAYNNNNRTG | 1 cut(s) | 866 |
| Rsr2I | CGGWCCG | 1 cut(s) | 91 |
| RsrII | CGGWCCG | 1 cut(s) | 91 |
| SalI | GTCGAC | 2 cut(s) | 314, 344 |
| SapI | GCTCTTC | 3 cut(s) | 125, 701, 767 |
| SatI | GCNGC | 7 cut(s) | 228, 359, 394, 523, 727, 754, 846 |
| Sau3AI | GATC | 3 cut(s) | 153, 333, 989 |
| Sau96I | GGNCC | 3 cut(s) | 58, 91, 808 |
| SchI | GAGTC | 5 cut(s) | 75, 80, 101, 320, 454 |
| ScrFI | CCNGG | 4 cut(s) | 12, 56, 271, 593 |
| SduI | GDGCHC | 6 cut(s) | 372, 442, 551, 582, 749, 792 |
| SfaNI | GCATC | 3 cut(s) | 198, 258, 417 |
| SfoI | GGCGCC | 2 cut(s) | 226, 844 |
| Sfr274I | CTCGAG | 1 cut(s) | 766 |
| SgrDI | CGTCGACG | 1 cut(s) | 314 |
| SinI | GGWCC | 2 cut(s) | 58, 91 |
| SlaI | CTCGAG | 1 cut(s) | 766 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 866 |
| SmlI | CTYRAG | 1 cut(s) | 766 |
| SmoI | CTYRAG | 1 cut(s) | 766 |
| Sse9I | AATT | 3 cut(s) | 418, 587, 971 |
| SspDI | GGCGCC | 2 cut(s) | 224, 842 |
| StyD4I | CCNGG | 4 cut(s) | 10, 54, 269, 591 |
| TaaI | ACNGT | 1 cut(s) | 644 |
| TaiI | ACGT | 2 cut(s) | 315, 558 |
| TaqI | TCGA | 6 cut(s) | 84, 315, 345, 767, 804, 935 |
| TaqII | GACCGA | 1 cut(s) | 79 |
| TasI | AATT | 3 cut(s) | 418, 587, 971 |
| TatI | WGTACW | 1 cut(s) | 654 |
| TauI | GCSGC | 6 cut(s) | 230, 396, 525, 729, 756, 848 |
| TfiI | GAWTC | 2 cut(s) | 79, 622 |
| TscAI | CASTG | 2 cut(s) | 647, 728 |
| TseFI | GTSAC | 1 cut(s) | 859 |
| TseI | GCWGC | 1 cut(s) | 358 |
| Tsp45I | GTSAC | 1 cut(s) | 859 |
| TspGWI | ACGGA | 1 cut(s) | 544 |
| TspRI | CASTG | 2 cut(s) | 647, 728 |
| Tth111I | GACNNNGTC | 3 cut(s) | 89, 176, 311 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 169 |
| VneI | GTGCAC | 1 cut(s) | 745 |
| VpaK11BI | GGWCC | 2 cut(s) | 58, 91 |
| XapI | RAATTY | 2 cut(s) | 418, 587 |
| XceI | RCATGY | 1 cut(s) | 817 |
| XhoI | CTCGAG | 1 cut(s) | 766 |
| XmiI | GTMKAC | 3 cut(s) | 315, 345, 515 |
| XmnI | GAANNNNTTC | 1 cut(s) | 626 |
| ZraI | GACGTC | 1 cut(s) | 313 |