Prupe.6G248900_v2.0.a1

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
24454345 .. 24458073
3729 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G248900.1

Sequence Viewer

Length: 2349 bp
ATGGTTTACATTTGGAGTGATCAAGAGAGTGTTGATGAACTGAAACACAAGCTTCTCTGCACCAATTTTGAACTAGAATCAGCAAAGATGATGGCAAAAGAGGAGGTAAGCAAAAATGAGGAGATCATAAAGCAGTTATTTGAACTCTTGAAGGCTGCTTGCCAAGAAAGAGATGAAGCAAGAAACCAGTTGCAAAAGCTAATGAATGAGTTATTGCCATCCATACCAGCTGATCAAACCACTCATATCCTCTCATCACAACCCAATAATGAAAACCCAATTCCCCAAAAAACAACAAACCCATCAATGCTAAAAGAATCAGAAGCTCTTCTTCCCCAAACATACAATTTCCATGTTTATGGTTCATATCCCACAAACTGCAACTTGGGTTCTCTCTCTTTCCAAGGCCTGCCTAATGCAAACTTTGCTGATTCAAGTAACTTGGCTCTGCCAAAAAGGCCTGTTGCTCAAGAATGTGGCTCCAAGTTTGATTGTGCTTCTGTTCTAATTGATAACATTGCTAGATTGAGACCATTGCCCAAGAAAGGAAGACTGATGCAGGCTGTCATGGATACTGGTCCTTTACTTCAAACACTTCTTGTTGCACCTCTTCCCAAGTGGAAAAATCCACCCACTCTCATCTATGGAGGTGATCATTATGGCTCATTAATAGAGCAGAGATTAGAAGCAGTCGAGTCGATTTGCCCAACGCAGAGTTCATCGAGTGGTTCTGCTTCATTCCTTGAGAGTTCACCTGGCTTTTCTCAGATACCATCTTCTTCTGTGTTGAACTTTGCACGTGGCTCTGCTTGTTTGAACAATGGCCTGCAATTGCATGTTGGAAACAATACAGATGCCATGCAGTATCAGATTGCAACTGCTCACACTTCGGCTGGTGCCCTTCTTACTGAAACCCAGAAAGCTCATGCCCATGCCCTTCAACTTGGTACCTCGGATGCATTCTTCCATGCACGCCAGTTGTTCGACGAAACGCCTGACTTGAGCGTAGTATCGGCCACGTCAATAATAGGCAGCTTTGCTCGGCAGCACCATCATGAAGAAGCTATTTATCTCTTTTCAAGAATGCTTCTTTCGAATATTAGACCCAACGAATTTACATTTGGCACTGTCATTCACTCGTCAACTGCACTTGGAGACCTAAACATAGGCAAGCAACTTCATGCATGTGCAACAAAGATAGGTTTGCATTCGAATGTCTTTGTGGGAAGTGCAACGTTAGATCTTTATGCCAAGTTGAGCATTACCCAGGATGCTAAAAGAGCTTTTGAAGATACCCAGAAGCCCAATGTAGTTTCTTACACCACATTGATATATGCATACCTGAAAAAGGAGAAGCTTGAAGAAGCTTTGAAGCTTTTCCAAGTGATGCCAGAAAGGAATGTTGTTTCATGGAATGCAATGATTGGAGGGTATAGCCAAACAGGCCACAATGAAGAGGCTGTCAATCTATTCATTGAGATGCTTAGAAATGGGTTGGTACCTAACCATTCTACTTTTCCTTGTGCTATCATTGCAGCTGCCAATATAGCAGCACTAGGAATGGGCAGAAGTTTTCATGCCTGTGCTGTCAAATTCTTGGGTAAGCTTGATGTGTTTATTGGCAACTCACTAATAAGCTTTTATGCAAAATGTGGTAGCATGGAAGATAGTCTCTTGGTTTTCAACAAAATTGAAGAAAGAAACATTGTTTCTTGGAATGCTGTGATATGTGGCTATGCTCAAAATGGTAAAGGAGAAGAAGCAATAAGCTTTTTTGAAAGGATGAGGTTGTCAAGTTGCAAACCCAATAGTGTTACACTTCTTGGCTTATTGTGGGCTTGCAACCATGCTGGTCTTGTTGACCAGGGTTATTTTTATTTCAATCAGGCAAGAATTGAAGACCCCAGCATTCTGAAGCCTGAGCACTATGCTTGTATGGTTGATTTACTCTCCCGGTCTGGGTGTTTCGGAGAAGCTGAGGAGTTTATCAGCAATTTGCCTTTTGAACCAGGTATTGGGTTTTGGAAAGCATTGCTTGGTGGCTGTCAAATCCACTCAAATATGGAATTAGGGGAGTTTGCAGCTAGGAAAATATTGGCTTTGGATCCTGAAGATGTGTCATCATATGTAATGTTGTCCAATGCACATTCCGCAGCTGGCAGATGGCAGAGTGTGGCAACAATAAGGAGAGAAATGAAAGAAAAAGGGTTGAAAAGGGTTCCAGGCTGCAGTTGGATAGAAATCAGGAACAGAGTTCATGTATTTGTTACTGGGGATAAGAACCATCACCAAGTGAGTGAAATGTTATCTATATTGAAAATTCTGTATAGAGATTTTAAGGGAGAATAA

Protein Analysis

783

Amino Acids

86.49

Weight (kDa)

6.29

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016022)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G42450 AT5G42450
fragaria_vesca FvH4_6g14440 FvH4_6g14560
malus_domestica MD12G1136500.v1.1
prunus_persica Prupe.6G248900_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0467611
rosa_laevigata RLG00000024485
rosa_multiflora Rmu_sc0011632.1_g000010
rosa_roxburghii Rroxscaffold_6G00413550
rosa_rugosa Rorug03G0088500
rosa_samantha Rh3AG136800 Rh3BG158600 Rh3DG159100
rosa_wichuraiana Rw3G012960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 947, 1498
AccB1I GGYRCC 3 cut(s) 896, 947, 1498
AccB7I CCANNNNNTGG 1 cut(s) 2015
AciI CCGC 1 cut(s) 2151
AclI AACGTT 1 cut(s) 1235
AclWI GGATC 2 cut(s) 2099, 2112
AcoI YGGCCR 1 cut(s) 1014
AcsI RAATTY 3 cut(s) 1112, 1592, 2319
AcuI CTGAAG 2 cut(s) 1934, 2130
AcvI CACGTG 1 cut(s) 800
AdeI CACNNNGTG 1 cut(s) 2293
AfaI GTAC 2 cut(s) 949, 1500
AfiI CCNNNNNNNGG 4 cut(s) 545, 1348, 1959, 2015
AjiI CACGTC 1 cut(s) 1020
AjnI CCWGG 5 cut(s) 754, 1266, 1863, 2008, 2221
AjuI GAANNNNNNNTTGG 6 cut(s) 700, 732, 1104, 1136, 1998, 2030
Alw21I GWGCWC 1 cut(s) 1926
Alw26I GTCTC 3 cut(s) 523, 1149, 1676
AlwI GGATC 2 cut(s) 2099, 2112
AoxI GGCC 5 cut(s) 406, 458, 823, 1014, 1444
ApeKI GCWGC 9 cut(s) 155, 1032, 1045, 1535, 1538, 1550, 2081, 2153, 2226
ApoI RAATTY 3 cut(s) 1112, 1592, 2319
AseI ATTAAT 1 cut(s) 668
Asp700I GAANNNNTTC 2 cut(s) 327, 1376
Asp718I GGTACC 2 cut(s) 947, 1498
AspS9I GGNCC 1 cut(s) 578
AsuC2I CCSGG 1 cut(s) 1954
AsuHPI GGTGA 3 cut(s) 662, 744, 2279
AsuII TTCGAA 2 cut(s) 1094, 1211
AvaII GGWCC 1 cut(s) 578
BaeGI GKGCMC 1 cut(s) 901
BamHI GGATCC 1 cut(s) 2104
BanI GGYRCC 3 cut(s) 896, 947, 1498
BbrPI CACGTG 1 cut(s) 800
BbsI GAAGAC 2 cut(s) 556, 1905
Bbv12I GWGCWC 1 cut(s) 1926
BbvCI CCTCAGC 1 cut(s) 1977
BbvI GCAGC 9 cut(s) 142, 1044, 1057, 1525, 1547, 1562, 2093, 2165, 2213
BccI CCATC 7 cut(s) 85, 226, 310, 781, 1059, 2157, 2292
BcgI CGANNNNNNTGC 2 cut(s) 678, 712
BciT130I CCWGG 5 cut(s) 756, 1268, 1865, 2010, 2223
BciVI GTATCC 1 cut(s) 565
BclI TGATCA 3 cut(s) 19, 232, 652
BcnI CCSGG 1 cut(s) 1954
BcoDI GTCTC 3 cut(s) 523, 1149, 1676
BfaI CTAG 4 cut(s) 74, 522, 1556, 2085
BfmI CTRYAG 1 cut(s) 2227
BfuI GTATCC 1 cut(s) 565
BglI GCCNNNNNGGC 2 cut(s) 457, 1443
BglII AGATCT 1 cut(s) 1240
BisI GCNGC 9 cut(s) 156, 1033, 1046, 1536, 1539, 1551, 2082, 2154, 2227
BlsI GCNGC 9 cut(s) 157, 1034, 1047, 1537, 1540, 1552, 2083, 2155, 2228
Bme1390I CCNGG 6 cut(s) 756, 1268, 1865, 1954, 2010, 2223
Bme18I GGWCC 1 cut(s) 578
BmgBI CACGTC 1 cut(s) 1020
BmgT120I GGNCC 1 cut(s) 578
BmiI GGNNCC 6 cut(s) 481, 898, 949, 1500, 2106, 2220
BmrFI CCNGG 6 cut(s) 756, 1268, 1865, 1954, 2010, 2223
BmrI ACTGGG 1 cut(s) 2280
BmsI GCATC 6 cut(s) 546, 844, 946, 1261, 1377, 1470
BmuI ACTGGG 1 cut(s) 2280
BpiI GAAGAC 2 cut(s) 556, 1905
Bpu10I CCTNAGC 2 cut(s) 1920, 1977
Bpu14I TTCGAA 2 cut(s) 1094, 1211
BpuEI CTTGAG 3 cut(s) 453, 764, 1021
BpuMI CCSGG 1 cut(s) 1954
BsaAI YACGTR 1 cut(s) 800
BsaBI GATNNNNATC 1 cut(s) 2240
BsaI GGTCTC 2 cut(s) 523, 1149
BsaJI CCNNGG 4 cut(s) 403, 951, 1266, 1864
Bsc4I CCNNNNNNNGG 4 cut(s) 545, 1348, 1959, 2015
Bse1I ACTGG 4 cut(s) 187, 580, 976, 2275
Bse3DI GCAATG 5 cut(s) 516, 533, 1425, 1530, 2030
Bse8I GATNNNNATC 1 cut(s) 2240
BseBI CCWGG 5 cut(s) 756, 1268, 1865, 2010, 2223
BseDI CCNNGG 4 cut(s) 403, 951, 1266, 1864
BseGI GGATG 4 cut(s) 218, 961, 1276, 1788
BseJI GATNNNNATC 1 cut(s) 2240
BseLI CCNNNNNNNGG 4 cut(s) 545, 1348, 1959, 2015
BseMI GCAATG 5 cut(s) 516, 533, 1425, 1530, 2030
BseMII CTCAG 3 cut(s) 779, 1911, 1968
BseNI ACTGG 4 cut(s) 187, 580, 976, 2275
BseRI GAGGAG 3 cut(s) 116, 134, 1994
BseSI GKGCMC 1 cut(s) 901
BseXI GCAGC 9 cut(s) 142, 1044, 1057, 1525, 1547, 1562, 2093, 2165, 2213
BseYI CCCAGC 1 cut(s) 1904
BsgI GTGCAG 2 cut(s) 43, 1131
BshFI GGCC 5 cut(s) 408, 460, 825, 1016, 1446
BshNI GGYRCC 3 cut(s) 896, 947, 1498
BsiHKAI GWGCWC 1 cut(s) 1926
BsiSI CCGG 1 cut(s) 1954
BslI CCNNNNNNNGG 4 cut(s) 545, 1348, 1959, 2015
BsmAI GTCTC 3 cut(s) 523, 1149, 1676
BsmI GAATGC 6 cut(s) 959, 1089, 1207, 1420, 1723, 1908
BsnI GGCC 5 cut(s) 408, 460, 825, 1016, 1446
Bso31I GGTCTC 2 cut(s) 523, 1149
Bsp119I TTCGAA 2 cut(s) 1094, 1211
Bsp1286I GDGCHC 2 cut(s) 901, 1926
Bsp143I GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
BspACI CCGC 1 cut(s) 2151
BspANI GGCC 5 cut(s) 408, 460, 825, 1016, 1446
BspCNI CTCAG 3 cut(s) 778, 1912, 1969
BspHI TCATGA 1 cut(s) 1054
BspLI GGNNCC 6 cut(s) 481, 898, 949, 1500, 2106, 2220
BspMAI CTGCAG 1 cut(s) 2231
BspPI GGATC 2 cut(s) 2099, 2112
BspQI GCTCTTC 1 cut(s) 333
BspT104I TTCGAA 2 cut(s) 1094, 1211
BspT107I GGYRCC 3 cut(s) 896, 947, 1498
BspTNI GGTCTC 2 cut(s) 523, 1149
BsrDI GCAATG 5 cut(s) 516, 533, 1425, 1530, 2030
BsrI ACTGG 4 cut(s) 187, 580, 976, 2275
BssECI CCNNGG 4 cut(s) 403, 951, 1266, 1864
BssMI GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
BssT1I CCWWGG 1 cut(s) 403
Bst2UI CCWGG 5 cut(s) 756, 1268, 1865, 2010, 2223
Bst4CI ACNGT 1 cut(s) 1129
Bst6I CTCTTC 3 cut(s) 333, 615, 1449
BstAPI GCANNNNNTGC 1 cut(s) 425
BstBAI YACGTR 1 cut(s) 800
BstBI TTCGAA 2 cut(s) 1094, 1211
BstC8I GCNNGC 8 cut(s) 160, 410, 561, 827, 973, 1172, 1840, 2158
BstDEI CTNAG 4 cut(s) 765, 1484, 1920, 1977
BstENI CCTNNNNNAGG 1 cut(s) 1346
BstF5I GGATG 4 cut(s) 218, 961, 1276, 1788
BstKTI GATC 6 cut(s) 22, 126, 235, 655, 1243, 2107
BstMAI GTCTC 3 cut(s) 523, 1149, 1676
BstMBI GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
BstMWI GCNNNNNNNGC 7 cut(s) 425, 457, 1280, 1443, 1532, 1547, 2150
BstNI CCWGG 5 cut(s) 756, 1268, 1865, 2010, 2223
BstNSI RCATGY 2 cut(s) 839, 1188
BstSCI CCNGG 6 cut(s) 754, 1266, 1863, 1952, 2008, 2221
BstSFI CTRYAG 1 cut(s) 2227
BstSLI GKGCMC 1 cut(s) 901
BstV1I GCAGC 9 cut(s) 142, 1044, 1057, 1525, 1547, 1562, 2093, 2165, 2213
BstV2I GAAGAC 2 cut(s) 556, 1905
BstX2I RGATCY 2 cut(s) 1240, 2104
BstXI CCANNNNNNTGG 1 cut(s) 359
BstYI RGATCY 2 cut(s) 1240, 2104
BsuI GTATCC 1 cut(s) 565
BsuRI GGCC 5 cut(s) 408, 460, 825, 1016, 1446
BtrI CACGTC 1 cut(s) 1020
BtsCI GGATG 4 cut(s) 218, 961, 1276, 1788
BtsIMutI CAGTG 1 cut(s) 1125
Cac8I GCNNGC 8 cut(s) 160, 410, 561, 827, 973, 1172, 1840, 2158
CciI TCATGA 1 cut(s) 1054
Cfr13I GGNCC 1 cut(s) 578
CsiI ACCWGGT 1 cut(s) 2008
Csp6I GTAC 2 cut(s) 948, 1499
CviQI GTAC 2 cut(s) 948, 1499
DdeI CTNAG 4 cut(s) 765, 1484, 1920, 1977
DpnI GATC 6 cut(s) 21, 125, 234, 654, 1242, 2106
DpnII GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
DraIII CACNNNGTG 1 cut(s) 2293
EaeI YGGCCR 1 cut(s) 1014
Eam1104I CTCTTC 3 cut(s) 333, 615, 1449
EarI CTCTTC 3 cut(s) 333, 615, 1449
Eco130I CCWWGG 1 cut(s) 403
Eco147I AGGCCT 2 cut(s) 408, 460
Eco31I GGTCTC 2 cut(s) 523, 1149
Eco47I GGWCC 1 cut(s) 578
Eco57I CTGAAG 2 cut(s) 1934, 2130
Eco72I CACGTG 1 cut(s) 800
EcoNI CCTNNNNNAGG 1 cut(s) 1346
EcoRII CCWGG 5 cut(s) 754, 1266, 1863, 2008, 2221
EcoT14I CCWWGG 1 cut(s) 403
EcoT22I ATGCAT 3 cut(s) 961, 1186, 1339
ErhI CCWWGG 1 cut(s) 403
FalI AAGNNNNNCTT 4 cut(s) 315, 347, 2019, 2051
FauNDI CATATG 1 cut(s) 2125
FbaI TGATCA 3 cut(s) 19, 232, 652
Fnu4HI GCNGC 9 cut(s) 156, 1033, 1046, 1536, 1539, 1551, 2082, 2154, 2227
FokI GGATG 4 cut(s) 205, 968, 1283, 1795
Fsp4HI GCNGC 9 cut(s) 156, 1033, 1046, 1536, 1539, 1551, 2082, 2154, 2227
FspBI CTAG 4 cut(s) 74, 522, 1556, 2085
GluI GCNGC 9 cut(s) 156, 1033, 1046, 1536, 1539, 1551, 2082, 2154, 2227
GsaI CCCAGC 1 cut(s) 1908
HaeIII GGCC 5 cut(s) 408, 460, 825, 1016, 1446
HapII CCGG 1 cut(s) 1954
HincII GTYRAC 2 cut(s) 1143, 1861
HindII GTYRAC 2 cut(s) 1143, 1861
HindIII AAGCTT 7 cut(s) 50, 1355, 1365, 1373, 1604, 1636, 1768
HinfI GANTC 4 cut(s) 77, 317, 431, 695
HpaII CCGG 1 cut(s) 1954
HphI GGTGA 3 cut(s) 662, 744, 2279
Hpy166II GTNNAC 4 cut(s) 7, 752, 1143, 1861
Hpy188I TCNGA 6 cut(s) 322, 768, 870, 955, 1914, 1970
Hpy188III TCNNGA 7 cut(s) 23, 148, 470, 1055, 1080, 2108, 2245
Hpy8I GTNNAC 4 cut(s) 7, 752, 1143, 1861
Hpy99I CGWCG 1 cut(s) 989
HpyAV CCTTC 3 cut(s) 145, 911, 947
HpyCH4III ACNGT 1 cut(s) 1129
HpyCH4IV ACGT 3 cut(s) 799, 1019, 1235
HpyF10VI GCNNNNNNNGC 7 cut(s) 425, 457, 1280, 1443, 1532, 1547, 2150
HpyF3I CTNAG 4 cut(s) 765, 1484, 1920, 1977
HpySE526I ACGT 3 cut(s) 799, 1019, 1235
KpnI GGTACC 2 cut(s) 951, 1502
Ksp22I TGATCA 3 cut(s) 19, 232, 652
Kzo9I GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 1 cut(s) 485
Lsp1109I GCAGC 9 cut(s) 142, 1044, 1057, 1525, 1547, 1562, 2093, 2165, 2213
LweI GCATC 6 cut(s) 546, 844, 946, 1261, 1377, 1470
MabI ACCWGGT 1 cut(s) 2008
MaeI CTAG 4 cut(s) 74, 522, 1556, 2085
MaeII ACGT 3 cut(s) 799, 1019, 1235
MaeIII GTNAC 3 cut(s) 437, 1813, 2266
MalI GATC 6 cut(s) 21, 125, 234, 654, 1242, 2106
MboI GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
MfeI CAATTG 1 cut(s) 830
MflI RGATCY 2 cut(s) 1240, 2104
MhlI GDGCHC 2 cut(s) 901, 1926
MlyI GAGTC 1 cut(s) 704
MmeI TCCRAC 2 cut(s) 820, 2213
Mph1103I ATGCAT 3 cut(s) 961, 1186, 1339
MroXI GAANNNNTTC 2 cut(s) 327, 1376
MseI TTAA 2 cut(s) 668, 2337
MslI CAYNNNNRTG 7 cut(s) 357, 930, 1053, 1185, 1212, 1478, 1581
MspA1I CMGCKG 3 cut(s) 230, 1538, 2156
MspI CCGG 1 cut(s) 1954
MspR9I CCNGG 6 cut(s) 756, 1268, 1865, 1954, 2010, 2223
MunI CAATTG 1 cut(s) 830
Mva1269I GAATGC 6 cut(s) 959, 1089, 1207, 1420, 1723, 1908
MvaI CCWGG 5 cut(s) 756, 1268, 1865, 2010, 2223
MwoI GCNNNNNNNGC 7 cut(s) 425, 457, 1280, 1443, 1532, 1547, 2150
NciI CCSGG 1 cut(s) 1954
NdeI CATATG 1 cut(s) 2125
NdeII GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
NlaIV GGNNCC 6 cut(s) 481, 898, 949, 1500, 2106, 2220
NmeAIII GCCGAG 1 cut(s) 1021
NsiI ATGCAT 3 cut(s) 961, 1186, 1339
NspI RCATGY 2 cut(s) 839, 1188
NspV TTCGAA 2 cut(s) 1094, 1211
PagI TCATGA 1 cut(s) 1054
PceI AGGCCT 2 cut(s) 408, 460
PciSI GCTCTTC 1 cut(s) 333
PctI GAATGC 6 cut(s) 959, 1089, 1207, 1420, 1723, 1908
PdmI GAANNNNTTC 2 cut(s) 327, 1376
PfeI GAWTC 3 cut(s) 77, 317, 431
PflMI CCANNNNNTGG 1 cut(s) 2015
PkrI GCNGC 9 cut(s) 157, 1034, 1047, 1537, 1540, 1552, 2083, 2155, 2228
PleI GAGTC 1 cut(s) 703
PmaCI CACGTG 1 cut(s) 800
PmlI CACGTG 1 cut(s) 800
PpsI GAGTC 1 cut(s) 703
Ppu21I YACGTR 1 cut(s) 800
PshBI ATTAAT 1 cut(s) 668
Psp1406I AACGTT 1 cut(s) 1235
Psp6I CCWGG 5 cut(s) 754, 1266, 1863, 2008, 2221
PspCI CACGTG 1 cut(s) 800
PspFI CCCAGC 1 cut(s) 1904
PspGI CCWGG 5 cut(s) 754, 1266, 1863, 2008, 2221
PspN4I GGNNCC 6 cut(s) 481, 898, 949, 1500, 2106, 2220
PspPI GGNCC 1 cut(s) 578
PstI CTGCAG 1 cut(s) 2231
PsuI RGATCY 2 cut(s) 1240, 2104
PvuII CAGCTG 3 cut(s) 230, 1538, 2156
RsaI GTAC 2 cut(s) 949, 1500
RsaNI GTAC 2 cut(s) 948, 1499
RseI CAYNNNNRTG 7 cut(s) 357, 930, 1053, 1185, 1212, 1478, 1581
SapI GCTCTTC 1 cut(s) 333
SaqAI TTAA 2 cut(s) 668, 2337
SatI GCNGC 9 cut(s) 156, 1033, 1046, 1536, 1539, 1551, 2082, 2154, 2227
Sau3AI GATC 6 cut(s) 19, 123, 232, 652, 1240, 2104
Sau96I GGNCC 1 cut(s) 578
SchI GAGTC 1 cut(s) 704
ScrFI CCNGG 6 cut(s) 756, 1268, 1865, 1954, 2010, 2223
SduI GDGCHC 2 cut(s) 901, 1926
SexAI ACCWGGT 1 cut(s) 2008
SfaNI GCATC 6 cut(s) 546, 844, 946, 1261, 1377, 1470
SfcI CTRYAG 1 cut(s) 2227
SfuI TTCGAA 2 cut(s) 1094, 1211
SinI GGWCC 1 cut(s) 578
SmiMI CAYNNNNRTG 7 cut(s) 357, 930, 1053, 1185, 1212, 1478, 1581
SmlI CTYRAG 3 cut(s) 468, 743, 1000
SmoI CTYRAG 3 cut(s) 468, 743, 1000
SseBI AGGCCT 2 cut(s) 408, 460
SsiI CCGC 1 cut(s) 2151
SspI AATATT 2 cut(s) 1099, 2094
SspMI CTAG 4 cut(s) 74, 522, 1556, 2085
StuI AGGCCT 2 cut(s) 408, 460
StyD4I CCNGG 6 cut(s) 754, 1266, 1863, 1952, 2008, 2221
StyI CCWWGG 1 cut(s) 403
TaaI ACNGT 1 cut(s) 1129
TaiI ACGT 3 cut(s) 802, 1022, 1238
TaqI TCGA 6 cut(s) 693, 698, 722, 984, 1094, 1211
TfiI GAWTC 3 cut(s) 77, 317, 431
Tru1I TTAA 2 cut(s) 668, 2337
Tru9I TTAA 2 cut(s) 668, 2337
TscAI CASTG 1 cut(s) 1132
TseI GCWGC 9 cut(s) 155, 1032, 1045, 1535, 1538, 1550, 2081, 2153, 2226
TspRI CASTG 1 cut(s) 1132
Van91I CCANNNNNTGG 1 cut(s) 2015
VpaK11BI GGWCC 1 cut(s) 578
VspI ATTAAT 1 cut(s) 668
XagI CCTNNNNNAGG 1 cut(s) 1346
XapI RAATTY 3 cut(s) 1112, 1592, 2319
XceI RCATGY 2 cut(s) 839, 1188
XcmI CCANNNNNNNNNTGG 1 cut(s) 2229
XmnI GAANNNNTTC 2 cut(s) 327, 1376
XspI CTAG 4 cut(s) 74, 522, 1556, 2085
Zsp2I ATGCAT 3 cut(s) 961, 1186, 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.