Calcium-dependent protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51850 AT3G51850 AT3G51850 |
| fragaria_vesca | FvH4_6g11340 |
| malus_domestica | MD04G1154500.v1.1 MD12G1168200.v1.1 |
| prunus_persica | Prupe.6G278500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0462921 |
| rosa_laevigata | RLG00000024823 |
| rosa_multiflora | Rmu_sc0000766.1_g000018 |
| rosa_roxburghii | Rroxscaffold_6G00417100 |
| rosa_rugosa | Rorug03G0059800 Rorug03G0059900 |
| rosa_samantha | Rh3AG118100 Rh3BG123000 Rh3CG124800 Rh3DG123500 |
| rosa_wichuraiana | Rw3G010020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1460 |
| AccII | CGCG | 4 cut(s) | 183, 300, 464, 1356 |
| AclWI | GGATC | 4 cut(s) | 174, 818, 1155, 1168 |
| AcoI | YGGCCR | 5 cut(s) | 24, 64, 76, 178, 1275 |
| AcsI | RAATTY | 6 cut(s) | 331, 571, 1153, 1241, 1457, 1567 |
| AcuI | CTGAAG | 1 cut(s) | 1200 |
| AcyI | GRCGYC | 1 cut(s) | 195 |
| AfaI | GTAC | 3 cut(s) | 158, 203, 1390 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 36, 96, 759, 760 |
| AflII | CTTAAG | 1 cut(s) | 989 |
| AjiI | CACGTC | 1 cut(s) | 46 |
| AjnI | CCWGG | 4 cut(s) | 35, 473, 619, 1227 |
| AleI | CACNNNNGTG | 1 cut(s) | 225 |
| Alw21I | GWGCWC | 4 cut(s) | 177, 234, 417, 1353 |
| AlwI | GGATC | 4 cut(s) | 174, 818, 1155, 1168 |
| Ama87I | CYCGRG | 1 cut(s) | 539 |
| ApeKI | GCWGC | 2 cut(s) | 458, 496 |
| ApoI | RAATTY | 6 cut(s) | 331, 571, 1153, 1241, 1457, 1567 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1013, 1290, 1498 |
| AspLEI | GCGC | 2 cut(s) | 95, 300 |
| AspS9I | GGNCC | 5 cut(s) | 270, 477, 692, 831, 1560 |
| AsuC2I | CCSGG | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 4 cut(s) | 400, 422, 463, 635 |
| AsuII | TTCGAA | 2 cut(s) | 254, 1150 |
| AvaI | CYCGRG | 1 cut(s) | 539 |
| AvaII | GGWCC | 3 cut(s) | 270, 477, 1560 |
| AxyI | CCTNAGG | 2 cut(s) | 669, 1031 |
| BaeGI | GKGCMC | 1 cut(s) | 135 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 193, 226 |
| BalI | TGGCCA | 1 cut(s) | 1277 |
| BamHI | GGATCC | 1 cut(s) | 1160 |
| BanII | GRGCYC | 4 cut(s) | 177, 234, 417, 1353 |
| BbsI | GAAGAC | 1 cut(s) | 1077 |
| Bbv12I | GWGCWC | 4 cut(s) | 177, 234, 417, 1353 |
| BbvI | GCAGC | 2 cut(s) | 445, 508 |
| BccI | CCATC | 6 cut(s) | 385, 1106, 1360, 1367, 1430, 1550 |
| BceAI | ACGGC | 4 cut(s) | 14, 91, 362, 1345 |
| BciT130I | CCWGG | 4 cut(s) | 37, 475, 621, 1229 |
| BcnI | CCSGG | 1 cut(s) | 97 |
| BfmI | CTRYAG | 1 cut(s) | 1265 |
| BfoI | RGCGCY | 1 cut(s) | 96 |
| BfrI | CTTAAG | 1 cut(s) | 989 |
| BglII | AGATCT | 1 cut(s) | 17 |
| BisI | GCNGC | 7 cut(s) | 27, 181, 184, 459, 462, 465, 497 |
| BlsI | GCNGC | 7 cut(s) | 28, 182, 185, 460, 463, 466, 498 |
| BmcAI | AGTACT | 1 cut(s) | 158 |
| Bme1390I | CCNGG | 5 cut(s) | 37, 97, 475, 621, 1229 |
| Bme18I | GGWCC | 3 cut(s) | 270, 477, 1560 |
| BmeT110I | CYCGRG | 1 cut(s) | 539 |
| BmgBI | CACGTC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 5 cut(s) | 270, 477, 692, 831, 1560 |
| BmiI | GGNNCC | 8 cut(s) | 108, 666, 750, 879, 932, 1162, 1225, 1561 |
| BmrFI | CCNGG | 5 cut(s) | 37, 97, 475, 621, 1229 |
| BmrI | ACTGGG | 1 cut(s) | 1488 |
| BmsI | GCATC | 3 cut(s) | 348, 931, 1348 |
| BmuI | ACTGGG | 1 cut(s) | 1488 |
| BpiI | GAAGAC | 1 cut(s) | 1077 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 617, 649, 711, 743 |
| BpmI | CTGGAG | 2 cut(s) | 73, 1510 |
| Bpu10I | CCTNAGC | 1 cut(s) | 266 |
| Bpu14I | TTCGAA | 2 cut(s) | 254, 1150 |
| BpuEI | CTTGAG | 3 cut(s) | 662, 938, 1498 |
| BpuMI | CCSGG | 1 cut(s) | 97 |
| BsaAI | YACGTR | 1 cut(s) | 201 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1287 |
| BsaHI | GRCGYC | 1 cut(s) | 195 |
| BsaJI | CCNNGG | 8 cut(s) | 36, 135, 181, 462, 827, 926, 964, 1227 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 960, 990 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 36, 96, 759, 760 |
| Bse118I | RCCGGY | 1 cut(s) | 125 |
| Bse1I | ACTGG | 2 cut(s) | 1483, 1493 |
| Bse21I | CCTNAGG | 2 cut(s) | 669, 1031 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1287 |
| BseBI | CCWGG | 4 cut(s) | 37, 475, 621, 1229 |
| BseDI | CCNNGG | 8 cut(s) | 36, 135, 181, 462, 827, 926, 964, 1227 |
| BseGI | GGATG | 4 cut(s) | 295, 922, 1441, 1561 |
| BseJI | GATNNNNATC | 1 cut(s) | 1287 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 36, 96, 759, 760 |
| BseMII | CTCAG | 4 cut(s) | 280, 648, 660, 1022 |
| BseNI | ACTGG | 2 cut(s) | 1483, 1493 |
| BseRI | GAGGAG | 1 cut(s) | 164 |
| BseSI | GKGCMC | 1 cut(s) | 135 |
| BseX3I | CGGCCG | 3 cut(s) | 24, 76, 178 |
| BseXI | GCAGC | 2 cut(s) | 445, 508 |
| BsgI | GTGCAG | 2 cut(s) | 515, 735 |
| Bsh1236I | CGCG | 4 cut(s) | 183, 300, 464, 1356 |
| Bsh1285I | CGRYCG | 5 cut(s) | 27, 79, 181, 217, 424 |
| BsiEI | CGRYCG | 5 cut(s) | 27, 79, 181, 217, 424 |
| BsiHKAI | GWGCWC | 4 cut(s) | 177, 234, 417, 1353 |
| BsiHKCI | CYCGRG | 1 cut(s) | 539 |
| BsiSI | CCGG | 5 cut(s) | 23, 63, 79, 96, 126 |
| BslFI | GGGAC | 3 cut(s) | 98, 542, 1495 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 36, 96, 759, 760 |
| BsmFI | GGGAC | 3 cut(s) | 98, 542, 1495 |
| BsoBI | CYCGRG | 1 cut(s) | 539 |
| Bsp119I | TTCGAA | 2 cut(s) | 254, 1150 |
| Bsp1286I | GDGCHC | 5 cut(s) | 135, 177, 234, 417, 1353 |
| Bsp1407I | TGTACA | 1 cut(s) | 1388 |
| Bsp143I | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| Bsp19I | CCATGG | 1 cut(s) | 827 |
| BspCNI | CTCAG | 4 cut(s) | 279, 647, 661, 1023 |
| BspFNI | CGCG | 4 cut(s) | 183, 300, 464, 1356 |
| BspLI | GGNNCC | 8 cut(s) | 108, 666, 750, 879, 932, 1162, 1225, 1561 |
| BspPI | GGATC | 4 cut(s) | 174, 818, 1155, 1168 |
| BspQI | GCTCTTC | 1 cut(s) | 422 |
| BspT104I | TTCGAA | 2 cut(s) | 254, 1150 |
| BspTI | CTTAAG | 1 cut(s) | 989 |
| BsrFI | RCCGGY | 1 cut(s) | 125 |
| BsrGI | TGTACA | 1 cut(s) | 1388 |
| BsrI | ACTGG | 2 cut(s) | 1483, 1493 |
| BssAI | RCCGGY | 1 cut(s) | 125 |
| BssECI | CCNNGG | 8 cut(s) | 36, 135, 181, 462, 827, 926, 964, 1227 |
| BssMI | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| BssNI | GRCGYC | 1 cut(s) | 195 |
| BssT1I | CCWWGG | 4 cut(s) | 135, 827, 926, 964 |
| Bst2UI | CCWGG | 4 cut(s) | 37, 475, 621, 1229 |
| Bst4CI | ACNGT | 3 cut(s) | 118, 224, 1532 |
| Bst6I | CTCTTC | 2 cut(s) | 422, 1125 |
| BstACI | GRCGYC | 1 cut(s) | 195 |
| BstAFI | CTTAAG | 1 cut(s) | 989 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 12 |
| BstAUI | TGTACA | 1 cut(s) | 1388 |
| BstBAI | YACGTR | 1 cut(s) | 201 |
| BstBI | TTCGAA | 2 cut(s) | 254, 1150 |
| BstC8I | GCNNGC | 3 cut(s) | 131, 241, 456 |
| BstDEI | CTNAG | 6 cut(s) | 266, 634, 669, 942, 1031, 1535 |
| BstDSI | CCRYGG | 3 cut(s) | 181, 462, 827 |
| BstEII | GGTNACC | 1 cut(s) | 469 |
| BstF5I | GGATG | 4 cut(s) | 295, 922, 1441, 1561 |
| BstFNI | CGCG | 4 cut(s) | 183, 300, 464, 1356 |
| BstH2I | RGCGCY | 1 cut(s) | 96 |
| BstHHI | GCGC | 2 cut(s) | 95, 300 |
| BstKTI | GATC | 6 cut(s) | 20, 73, 169, 424, 826, 1163 |
| BstMBI | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| BstMCI | CGRYCG | 5 cut(s) | 27, 79, 181, 217, 424 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 12, 32, 192, 345, 464, 928, 947, 1348 |
| BstNI | CCWGG | 4 cut(s) | 37, 475, 621, 1229 |
| BstPI | GGTNACC | 1 cut(s) | 469 |
| BstSCI | CCNGG | 5 cut(s) | 35, 95, 473, 619, 1227 |
| BstSFI | CTRYAG | 1 cut(s) | 1265 |
| BstSLI | GKGCMC | 1 cut(s) | 135 |
| BstUI | CGCG | 4 cut(s) | 183, 300, 464, 1356 |
| BstV1I | GCAGC | 2 cut(s) | 445, 508 |
| BstV2I | GAAGAC | 1 cut(s) | 1077 |
| BstX2I | RGATCY | 2 cut(s) | 17, 1160 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1570 |
| BstYI | RGATCY | 2 cut(s) | 17, 1160 |
| BstZI | CGGCCG | 3 cut(s) | 24, 76, 178 |
| Bsu36I | CCTNAGG | 2 cut(s) | 669, 1031 |
| BtgI | CCRYGG | 3 cut(s) | 181, 462, 827 |
| BtgZI | GCGATG | 1 cut(s) | 1371 |
| BtrI | CACGTC | 1 cut(s) | 46 |
| BtsCI | GGATG | 4 cut(s) | 295, 922, 1441, 1561 |
| BtsI | GCAGTG | 1 cut(s) | 282 |
| BtsIMutI | CAGTG | 4 cut(s) | 123, 282, 1101, 1361 |
| Cac8I | GCNNGC | 3 cut(s) | 131, 241, 456 |
| CfoI | GCGC | 2 cut(s) | 95, 300 |
| Cfr10I | RCCGGY | 1 cut(s) | 125 |
| Cfr13I | GGNCC | 5 cut(s) | 270, 477, 692, 831, 1560 |
| Cfr42I | CCGCGG | 2 cut(s) | 184, 465 |
| CseI | GACGC | 1 cut(s) | 184 |
| Csp6I | GTAC | 3 cut(s) | 157, 202, 1389 |
| CviAII | CATG | 4 cut(s) | 512, 661, 828, 1468 |
| CviQI | GTAC | 3 cut(s) | 157, 202, 1389 |
| DdeI | CTNAG | 6 cut(s) | 266, 634, 669, 942, 1031, 1535 |
| DpnI | GATC | 6 cut(s) | 19, 72, 168, 423, 825, 1162 |
| DpnII | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1460 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1460 |
| EaeI | YGGCCR | 5 cut(s) | 24, 64, 76, 178, 1275 |
| EagI | CGGCCG | 3 cut(s) | 24, 76, 178 |
| Eam1104I | CTCTTC | 2 cut(s) | 422, 1125 |
| EarI | CTCTTC | 2 cut(s) | 422, 1125 |
| EciI | GGCGGA | 1 cut(s) | 779 |
| Ecl136II | GAGCTC | 4 cut(s) | 175, 232, 415, 1351 |
| EclXI | CGGCCG | 3 cut(s) | 24, 76, 178 |
| Eco130I | CCWWGG | 4 cut(s) | 135, 827, 926, 964 |
| Eco24I | GRGCYC | 4 cut(s) | 177, 234, 417, 1353 |
| Eco47I | GGWCC | 3 cut(s) | 270, 477, 1560 |
| Eco52I | CGGCCG | 3 cut(s) | 24, 76, 178 |
| Eco53kI | GAGCTC | 4 cut(s) | 175, 232, 415, 1351 |
| Eco57I | CTGAAG | 1 cut(s) | 1200 |
| Eco81I | CCTNAGG | 2 cut(s) | 669, 1031 |
| Eco88I | CYCGRG | 1 cut(s) | 539 |
| Eco91I | GGTNACC | 1 cut(s) | 469 |
| EcoICRI | GAGCTC | 4 cut(s) | 175, 232, 415, 1351 |
| EcoO65I | GGTNACC | 1 cut(s) | 469 |
| EcoRI | GAATTC | 2 cut(s) | 331, 571 |
| EcoRII | CCWGG | 4 cut(s) | 35, 473, 619, 1227 |
| EcoT14I | CCWWGG | 4 cut(s) | 135, 827, 926, 964 |
| EcoT38I | GRGCYC | 4 cut(s) | 177, 234, 417, 1353 |
| ErhI | CCWWGG | 4 cut(s) | 135, 827, 926, 964 |
| FaeI | CATG | 4 cut(s) | 515, 664, 831, 1471 |
| FaqI | GGGAC | 3 cut(s) | 98, 542, 1495 |
| FatI | CATG | 4 cut(s) | 511, 660, 827, 1467 |
| Fnu4HI | GCNGC | 7 cut(s) | 27, 181, 184, 459, 462, 465, 497 |
| FokI | GGATG | 4 cut(s) | 302, 909, 1448, 1568 |
| FriOI | GRGCYC | 4 cut(s) | 177, 234, 417, 1353 |
| Fsp4HI | GCNGC | 7 cut(s) | 27, 181, 184, 459, 462, 465, 497 |
| GlaI | GCGC | 2 cut(s) | 94, 299 |
| GluI | GCNGC | 7 cut(s) | 27, 181, 184, 459, 462, 465, 497 |
| GsuI | CTGGAG | 2 cut(s) | 73, 1510 |
| HaeII | RGCGCY | 1 cut(s) | 96 |
| HapII | CCGG | 5 cut(s) | 23, 63, 79, 96, 126 |
| HgaI | GACGC | 1 cut(s) | 184 |
| HhaI | GCGC | 2 cut(s) | 95, 300 |
| Hin1I | GRCGYC | 1 cut(s) | 195 |
| Hin1II | CATG | 4 cut(s) | 515, 664, 831, 1471 |
| Hin6I | GCGC | 2 cut(s) | 93, 298 |
| HinP1I | GCGC | 2 cut(s) | 93, 298 |
| HincII | GTYRAC | 1 cut(s) | 123 |
| HindII | GTYRAC | 1 cut(s) | 123 |
| HinfI | GANTC | 7 cut(s) | 86, 520, 630, 767, 1014, 1175, 1524 |
| HpaII | CCGG | 5 cut(s) | 23, 63, 79, 96, 126 |
| HphI | GGTGA | 4 cut(s) | 400, 422, 463, 635 |
| Hpy166II | GTNNAC | 4 cut(s) | 123, 280, 803, 1423 |
| Hpy188I | TCNGA | 6 cut(s) | 111, 426, 637, 772, 844, 1180 |
| Hpy188III | TCNNGA | 9 cut(s) | 170, 227, 268, 343, 668, 1143, 1415, 1503, 1515 |
| Hpy8I | GTNNAC | 4 cut(s) | 123, 280, 803, 1423 |
| Hpy99I | CGWCG | 2 cut(s) | 35, 115 |
| HpyAV | CCTTC | 5 cut(s) | 97, 346, 559, 1213, 1546 |
| HpyCH4III | ACNGT | 3 cut(s) | 118, 224, 1532 |
| HpyCH4IV | ACGT | 3 cut(s) | 45, 200, 820 |
| HpyCH4V | TGCA | 8 cut(s) | 15, 243, 382, 496, 716, 785, 905, 1361 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 12, 32, 192, 345, 464, 928, 947, 1348 |
| HpyF3I | CTNAG | 6 cut(s) | 266, 634, 669, 942, 1031, 1535 |
| HpySE526I | ACGT | 3 cut(s) | 45, 200, 820 |
| Hsp92I | GRCGYC | 1 cut(s) | 195 |
| Hsp92II | CATG | 4 cut(s) | 515, 664, 831, 1471 |
| HspAI | GCGC | 2 cut(s) | 93, 298 |
| KspI | CCGCGG | 2 cut(s) | 184, 465 |
| Kzo9I | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| LguI | GCTCTTC | 1 cut(s) | 422 |
| LmnI | GCTCC | 7 cut(s) | 112, 451, 670, 877, 936, 955, 1356 |
| Lsp1109I | GCAGC | 2 cut(s) | 445, 508 |
| LweI | GCATC | 3 cut(s) | 348, 931, 1348 |
| MaeII | ACGT | 3 cut(s) | 45, 200, 820 |
| MaeIII | GTNAC | 3 cut(s) | 196, 469, 503 |
| MalI | GATC | 6 cut(s) | 19, 72, 168, 423, 825, 1162 |
| MboI | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| MfeI | CAATTG | 3 cut(s) | 7, 1125, 1187 |
| MflI | RGATCY | 2 cut(s) | 17, 1160 |
| MhlI | GDGCHC | 5 cut(s) | 135, 177, 234, 417, 1353 |
| MlsI | TGGCCA | 1 cut(s) | 1277 |
| MluNI | TGGCCA | 1 cut(s) | 1277 |
| MlyI | GAGTC | 3 cut(s) | 80, 776, 1184 |
| MmeI | TCCRAC | 3 cut(s) | 134, 625, 855 |
| Mox20I | TGGCCA | 1 cut(s) | 1277 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1013, 1290, 1498 |
| MscI | TGGCCA | 1 cut(s) | 1277 |
| MseI | TTAA | 4 cut(s) | 990, 1077, 1089, 1136 |
| MslI | CAYNNNNRTG | 2 cut(s) | 225, 510 |
| Msp20I | TGGCCA | 1 cut(s) | 1277 |
| MspA1I | CMGCKG | 2 cut(s) | 183, 464 |
| MspCI | CTTAAG | 1 cut(s) | 989 |
| MspI | CCGG | 5 cut(s) | 23, 63, 79, 96, 126 |
| MspR9I | CCNGG | 5 cut(s) | 37, 97, 475, 621, 1229 |
| MunI | CAATTG | 3 cut(s) | 7, 1125, 1187 |
| MvaI | CCWGG | 4 cut(s) | 37, 475, 621, 1229 |
| MvnI | CGCG | 4 cut(s) | 183, 300, 464, 1356 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 12, 32, 192, 345, 464, 928, 947, 1348 |
| NciI | CCSGG | 1 cut(s) | 97 |
| NcoI | CCATGG | 1 cut(s) | 827 |
| NdeII | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| NlaIII | CATG | 4 cut(s) | 515, 664, 831, 1471 |
| NlaIV | GGNNCC | 8 cut(s) | 108, 666, 750, 879, 932, 1162, 1225, 1561 |
| NmeAIII | GCCGAG | 2 cut(s) | 156, 1198 |
| NmuCI | GTSAC | 3 cut(s) | 196, 469, 503 |
| NspV | TTCGAA | 2 cut(s) | 254, 1150 |
| OliI | CACNNNNGTG | 1 cut(s) | 225 |
| PciSI | GCTCTTC | 1 cut(s) | 422 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 183, 375, 1353 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1013, 1290, 1498 |
| PfeI | GAWTC | 4 cut(s) | 520, 630, 1014, 1524 |
| PkrI | GCNGC | 7 cut(s) | 28, 182, 185, 460, 463, 466, 498 |
| Ple19I | CGATCG | 1 cut(s) | 424 |
| PleI | GAGTC | 3 cut(s) | 80, 775, 1183 |
| PpsI | GAGTC | 3 cut(s) | 80, 775, 1183 |
| Ppu21I | YACGTR | 1 cut(s) | 201 |
| Psp124BI | GAGCTC | 4 cut(s) | 177, 234, 417, 1353 |
| Psp6I | CCWGG | 4 cut(s) | 35, 473, 619, 1227 |
| PspEI | GGTNACC | 1 cut(s) | 469 |
| PspGI | CCWGG | 4 cut(s) | 35, 473, 619, 1227 |
| PspN4I | GGNNCC | 8 cut(s) | 108, 666, 750, 879, 932, 1162, 1225, 1561 |
| PspPI | GGNCC | 5 cut(s) | 270, 477, 692, 831, 1560 |
| PsuI | RGATCY | 2 cut(s) | 17, 1160 |
| PvuI | CGATCG | 1 cut(s) | 424 |
| RsaI | GTAC | 3 cut(s) | 158, 203, 1390 |
| RsaNI | GTAC | 3 cut(s) | 157, 202, 1389 |
| RseI | CAYNNNNRTG | 2 cut(s) | 225, 510 |
| SacI | GAGCTC | 4 cut(s) | 177, 234, 417, 1353 |
| SacII | CCGCGG | 2 cut(s) | 184, 465 |
| SapI | GCTCTTC | 1 cut(s) | 422 |
| SaqAI | TTAA | 4 cut(s) | 990, 1077, 1089, 1136 |
| SatI | GCNGC | 7 cut(s) | 27, 181, 184, 459, 462, 465, 497 |
| Sau3AI | GATC | 6 cut(s) | 17, 70, 166, 421, 823, 1160 |
| Sau96I | GGNCC | 5 cut(s) | 270, 477, 692, 831, 1560 |
| ScaI | AGTACT | 1 cut(s) | 158 |
| SchI | GAGTC | 3 cut(s) | 80, 776, 1184 |
| ScrFI | CCNGG | 5 cut(s) | 37, 97, 475, 621, 1229 |
| SduI | GDGCHC | 5 cut(s) | 135, 177, 234, 417, 1353 |
| SfaNI | GCATC | 3 cut(s) | 348, 931, 1348 |
| SfcI | CTRYAG | 1 cut(s) | 1265 |
| Sfr303I | CCGCGG | 2 cut(s) | 184, 465 |
| SfuI | TTCGAA | 2 cut(s) | 254, 1150 |
| SgrBI | CCGCGG | 2 cut(s) | 184, 465 |
| SinI | GGWCC | 3 cut(s) | 270, 477, 1560 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 225, 510 |
| SmlI | CTYRAG | 4 cut(s) | 677, 917, 989, 1513 |
| SmoI | CTYRAG | 4 cut(s) | 677, 917, 989, 1513 |
| SspI | AATATT | 1 cut(s) | 838 |
| SstI | GAGCTC | 4 cut(s) | 177, 234, 417, 1353 |
| StyD4I | CCNGG | 5 cut(s) | 35, 95, 473, 619, 1227 |
| StyI | CCWWGG | 4 cut(s) | 135, 827, 926, 964 |
| TaaI | ACNGT | 3 cut(s) | 118, 224, 1532 |
| TaiI | ACGT | 3 cut(s) | 48, 203, 823 |
| TatI | WGTACW | 2 cut(s) | 156, 1388 |
| TauI | GCSGC | 5 cut(s) | 29, 183, 186, 464, 467 |
| TfiI | GAWTC | 4 cut(s) | 520, 630, 1014, 1524 |
| Tru1I | TTAA | 4 cut(s) | 990, 1077, 1089, 1136 |
| Tru9I | TTAA | 4 cut(s) | 990, 1077, 1089, 1136 |
| TscAI | CASTG | 4 cut(s) | 123, 282, 1108, 1368 |
| TseFI | GTSAC | 3 cut(s) | 196, 469, 503 |
| TseI | GCWGC | 2 cut(s) | 458, 496 |
| Tsp45I | GTSAC | 3 cut(s) | 196, 469, 503 |
| TspDTI | ATGAA | 7 cut(s) | 329, 512, 1022, 1077, 1299, 1487, 1565 |
| TspGWI | ACGGA | 2 cut(s) | 464, 1251 |
| TspRI | CASTG | 4 cut(s) | 123, 282, 1108, 1368 |
| Vha464I | CTTAAG | 1 cut(s) | 989 |
| VpaK11BI | GGWCC | 3 cut(s) | 270, 477, 1560 |
| XapI | RAATTY | 6 cut(s) | 331, 571, 1153, 1241, 1457, 1567 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1013, 1290, 1498 |
| ZrmI | AGTACT | 1 cut(s) | 158 |