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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08670 |
| fragaria_vesca | FvH4_6g09520 FvH4_6g09520 FvH4_6g09520 |
| malus_domestica | MD04G1176700.v1.1 MD12G1191700.v1.1 |
| prunus_persica | Prupe.6G296400_v2.0.a1 Prupe.6G296400_v2.0.a1 Prupe.6G296400_v2.0.a1 |
| pyrus_communis | pycom04g15610 pycom12g17880 |
| rosa_chinensis | RchiOBHm_Chr3g0460111 |
| rosa_laevigata | RLG00000025043 |
| rosa_multiflora | Rmu_sc0000449.1_g000053 |
| rosa_roxburghii | Rroxscaffold_6G00419830 |
| rosa_rugosa | Rorug03G0039600 |
| rosa_samantha | Rh3AG098000 Rh3BG101100 Rh3CG103200 Rh3DG102400 |
| rosa_wichuraiana | Rw3G008270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1738 |
| AatII | GACGTC | 1 cut(s) | 1593 |
| Acc36I | ACCTGC | 1 cut(s) | 454 |
| AccBSI | CCGCTC | 1 cut(s) | 588 |
| AccI | GTMKAC | 1 cut(s) | 1593 |
| AccII | CGCG | 1 cut(s) | 1434 |
| AciI | CCGC | 8 cut(s) | 257, 586, 934, 983, 1080, 1434, 1459, 1586 |
| AclWI | GGATC | 3 cut(s) | 126, 217, 636 |
| AcoI | YGGCCR | 1 cut(s) | 213 |
| AcsI | RAATTY | 3 cut(s) | 85, 750, 766 |
| AcuI | CTGAAG | 2 cut(s) | 531, 843 |
| AcyI | GRCGYC | 1 cut(s) | 1590 |
| AfaI | GTAC | 4 cut(s) | 667, 739, 1164, 1610 |
| AflIII | ACRYGT | 1 cut(s) | 809 |
| AgsI | TTSAA | 7 cut(s) | 85, 204, 402, 477, 675, 766, 1639 |
| AjiI | CACGTC | 1 cut(s) | 812 |
| AjnI | CCWGG | 3 cut(s) | 740, 1039, 1147 |
| Alw21I | GWGCWC | 3 cut(s) | 542, 1277, 1646 |
| Alw26I | GTCTC | 3 cut(s) | 556, 840, 1057 |
| AlwI | GGATC | 3 cut(s) | 126, 217, 636 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 386, 1454 |
| AoxI | GGCC | 7 cut(s) | 213, 605, 719, 743, 1013, 1156, 1526 |
| ApeKI | GCWGC | 6 cut(s) | 61, 111, 353, 1082, 1374, 1654 |
| ApoI | RAATTY | 3 cut(s) | 85, 750, 766 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 457 |
| AspLEI | GCGC | 1 cut(s) | 888 |
| AspS9I | GGNCC | 4 cut(s) | 720, 1032, 1156, 1685 |
| AsuHPI | GGTGA | 3 cut(s) | 196, 846, 1104 |
| AvaII | GGWCC | 2 cut(s) | 1032, 1685 |
| BanII | GRGCYC | 3 cut(s) | 542, 1146, 1734 |
| BauI | CACGAG | 1 cut(s) | 535 |
| BbsI | GAAGAC | 4 cut(s) | 1108, 1138, 1253, 1638 |
| Bbv12I | GWGCWC | 3 cut(s) | 542, 1277, 1646 |
| BbvI | GCAGC | 6 cut(s) | 73, 123, 340, 1069, 1386, 1641 |
| BccI | CCATC | 8 cut(s) | 320, 441, 445, 577, 601, 637, 805, 1697 |
| BceAI | ACGGC | 2 cut(s) | 1070, 1143 |
| BciT130I | CCWGG | 3 cut(s) | 742, 1041, 1149 |
| BciVI | GTATCC | 1 cut(s) | 941 |
| BclI | TGATCA | 1 cut(s) | 1678 |
| BcoDI | GTCTC | 3 cut(s) | 556, 840, 1057 |
| BfaI | CTAG | 6 cut(s) | 18, 450, 564, 657, 732, 921 |
| BfmI | CTRYAG | 2 cut(s) | 597, 1266 |
| BfuAI | ACCTGC | 1 cut(s) | 454 |
| BfuI | GTATCC | 1 cut(s) | 941 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 403 |
| BisI | GCNGC | 7 cut(s) | 62, 112, 354, 1083, 1375, 1435, 1655 |
| BlpI | GCTNAGC | 1 cut(s) | 541 |
| BlsI | GCNGC | 7 cut(s) | 63, 113, 355, 1084, 1376, 1436, 1656 |
| Bme1390I | CCNGG | 3 cut(s) | 742, 1041, 1149 |
| Bme18I | GGWCC | 2 cut(s) | 1032, 1685 |
| BmgBI | CACGTC | 1 cut(s) | 812 |
| BmgT120I | GGNCC | 4 cut(s) | 720, 1032, 1156, 1685 |
| BmiI | GGNNCC | 3 cut(s) | 1034, 1157, 1687 |
| BmrFI | CCNGG | 3 cut(s) | 742, 1041, 1149 |
| BmrI | ACTGGG | 2 cut(s) | 1287, 1417 |
| BmsI | GCATC | 7 cut(s) | 398, 494, 851, 1404, 1460, 1603, 1720 |
| BmuI | ACTGGG | 2 cut(s) | 1287, 1417 |
| BpiI | GAAGAC | 4 cut(s) | 1108, 1138, 1253, 1638 |
| BpmI | CTGGAG | 1 cut(s) | 822 |
| Bpu10I | CCTNAGC | 2 cut(s) | 349, 1194 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 541 |
| BpuEI | CTTGAG | 3 cut(s) | 700, 1108, 1459 |
| BsaAI | YACGTR | 1 cut(s) | 929 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1405 |
| BsaHI | GRCGYC | 1 cut(s) | 1590 |
| BsaJI | CCNNGG | 3 cut(s) | 1086, 1147, 1199 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 503, 533, 574, 604 |
| Bse118I | RCCGGY | 2 cut(s) | 66, 1524 |
| Bse1I | ACTGG | 7 cut(s) | 235, 287, 950, 1177, 1282, 1423, 1655 |
| Bse3DI | GCAATG | 2 cut(s) | 821, 1116 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1405 |
| BseBI | CCWGG | 3 cut(s) | 742, 1041, 1149 |
| BseDI | CCNNGG | 3 cut(s) | 1086, 1147, 1199 |
| BseGI | GGATG | 7 cut(s) | 433, 569, 902, 1165, 1395, 1406, 1672 |
| BseJI | GATNNNNATC | 1 cut(s) | 1405 |
| BseMI | GCAATG | 2 cut(s) | 821, 1116 |
| BseMII | CTCAG | 6 cut(s) | 68, 414, 555, 1185, 1403, 1568 |
| BseNI | ACTGG | 7 cut(s) | 235, 287, 950, 1177, 1282, 1423, 1655 |
| BseRI | GAGGAG | 1 cut(s) | 285 |
| BseXI | GCAGC | 6 cut(s) | 73, 123, 340, 1069, 1386, 1641 |
| BsgI | GTGCAG | 1 cut(s) | 1640 |
| Bsh1236I | CGCG | 1 cut(s) | 1434 |
| BshFI | GGCC | 7 cut(s) | 215, 607, 721, 745, 1015, 1158, 1528 |
| BsiHKAI | GWGCWC | 3 cut(s) | 542, 1277, 1646 |
| BsiSI | CCGG | 3 cut(s) | 67, 139, 1525 |
| BslFI | GGGAC | 2 cut(s) | 834, 1018 |
| BsmAI | GTCTC | 3 cut(s) | 556, 840, 1057 |
| BsmFI | GGGAC | 2 cut(s) | 834, 1018 |
| BsmI | GAATGC | 1 cut(s) | 19 |
| BsnI | GGCC | 7 cut(s) | 215, 607, 721, 745, 1015, 1158, 1528 |
| Bsp1286I | GDGCHC | 5 cut(s) | 542, 1146, 1277, 1646, 1734 |
| Bsp1407I | TGTACA | 1 cut(s) | 1162 |
| Bsp143I | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 541 |
| BspACI | CCGC | 8 cut(s) | 257, 586, 934, 983, 1080, 1434, 1459, 1586 |
| BspANI | GGCC | 7 cut(s) | 215, 607, 721, 745, 1015, 1158, 1528 |
| BspCNI | CTCAG | 6 cut(s) | 69, 415, 554, 1186, 1402, 1569 |
| BspFNI | CGCG | 1 cut(s) | 1434 |
| BspLI | GGNNCC | 3 cut(s) | 1034, 1157, 1687 |
| BspMI | ACCTGC | 1 cut(s) | 454 |
| BspPI | GGATC | 3 cut(s) | 126, 217, 636 |
| BspQI | GCTCTTC | 3 cut(s) | 478, 688, 1634 |
| BsrBI | CCGCTC | 1 cut(s) | 588 |
| BsrDI | GCAATG | 2 cut(s) | 821, 1116 |
| BsrFI | RCCGGY | 2 cut(s) | 66, 1524 |
| BsrGI | TGTACA | 1 cut(s) | 1162 |
| BsrI | ACTGG | 7 cut(s) | 235, 287, 950, 1177, 1282, 1423, 1655 |
| BssAI | RCCGGY | 2 cut(s) | 66, 1524 |
| BssECI | CCNNGG | 3 cut(s) | 1086, 1147, 1199 |
| BssMI | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| BssNI | GRCGYC | 1 cut(s) | 1590 |
| BssSI | CACGAG | 1 cut(s) | 535 |
| Bst2BI | CACGAG | 1 cut(s) | 535 |
| Bst2UI | CCWGG | 3 cut(s) | 742, 1041, 1149 |
| Bst4CI | ACNGT | 4 cut(s) | 368, 1107, 1556, 1661 |
| Bst6I | CTCTTC | 5 cut(s) | 128, 478, 688, 1388, 1634 |
| BstACI | GRCGYC | 1 cut(s) | 1590 |
| BstAUI | TGTACA | 1 cut(s) | 1162 |
| BstBAI | YACGTR | 1 cut(s) | 929 |
| BstC8I | GCNNGC | 3 cut(s) | 1449, 1459, 1475 |
| BstDEI | CTNAG | 9 cut(s) | 77, 349, 393, 423, 541, 992, 1194, 1389, 1577 |
| BstDSI | CCRYGG | 1 cut(s) | 1086 |
| BstF5I | GGATG | 7 cut(s) | 433, 569, 902, 1165, 1395, 1406, 1672 |
| BstFNI | CGCG | 1 cut(s) | 1434 |
| BstHHI | GCGC | 1 cut(s) | 888 |
| BstKTI | GATC | 9 cut(s) | 121, 212, 244, 380, 644, 704, 1225, 1403, 1681 |
| BstMAI | GTCTC | 3 cut(s) | 556, 840, 1057 |
| BstMBI | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 67, 403 |
| BstNI | CCWGG | 3 cut(s) | 742, 1041, 1149 |
| BstNSI | RCATGY | 1 cut(s) | 776 |
| BstSCI | CCNGG | 3 cut(s) | 740, 1039, 1147 |
| BstSFI | CTRYAG | 2 cut(s) | 597, 1266 |
| BstUI | CGCG | 1 cut(s) | 1434 |
| BstV1I | GCAGC | 6 cut(s) | 73, 123, 340, 1069, 1386, 1641 |
| BstV2I | GAAGAC | 4 cut(s) | 1108, 1138, 1253, 1638 |
| BstX2I | RGATCY | 1 cut(s) | 118 |
| BstYI | RGATCY | 1 cut(s) | 118 |
| BsuI | GTATCC | 1 cut(s) | 941 |
| BsuRI | GGCC | 7 cut(s) | 215, 607, 721, 745, 1015, 1158, 1528 |
| BtgI | CCRYGG | 1 cut(s) | 1086 |
| BtgZI | GCGATG | 1 cut(s) | 615 |
| BtrI | CACGTC | 1 cut(s) | 812 |
| BtsCI | GGATG | 7 cut(s) | 433, 569, 902, 1165, 1395, 1406, 1672 |
| BtsIMutI | CAGTG | 5 cut(s) | 468, 711, 1170, 1275, 1561 |
| BveI | ACCTGC | 1 cut(s) | 454 |
| Cac8I | GCNNGC | 3 cut(s) | 1449, 1459, 1475 |
| CaiI | CAGNNNCTG | 2 cut(s) | 386, 1454 |
| CfoI | GCGC | 1 cut(s) | 888 |
| Cfr10I | RCCGGY | 2 cut(s) | 66, 1524 |
| Cfr13I | GGNCC | 4 cut(s) | 720, 1032, 1156, 1685 |
| CseI | GACGC | 1 cut(s) | 151 |
| Csp6I | GTAC | 4 cut(s) | 666, 738, 1163, 1609 |
| CviAII | CATG | 2 cut(s) | 773, 1231 |
| CviQI | GTAC | 4 cut(s) | 666, 738, 1163, 1609 |
| DdeI | CTNAG | 9 cut(s) | 77, 349, 393, 423, 541, 992, 1194, 1389, 1577 |
| DpnI | GATC | 9 cut(s) | 120, 211, 243, 379, 643, 703, 1224, 1402, 1680 |
| DpnII | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| EaeI | YGGCCR | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 5 cut(s) | 128, 478, 688, 1388, 1634 |
| EarI | CTCTTC | 5 cut(s) | 128, 478, 688, 1388, 1634 |
| EciI | GGCGGA | 1 cut(s) | 923 |
| Ecl136II | GAGCTC | 1 cut(s) | 540 |
| Eco147I | AGGCCT | 1 cut(s) | 607 |
| Eco24I | GRGCYC | 3 cut(s) | 542, 1146, 1734 |
| Eco47I | GGWCC | 2 cut(s) | 1032, 1685 |
| Eco53kI | GAGCTC | 1 cut(s) | 540 |
| Eco57I | CTGAAG | 2 cut(s) | 531, 843 |
| EcoICRI | GAGCTC | 1 cut(s) | 540 |
| EcoO109I | RGGNCCY | 3 cut(s) | 720, 1032, 1685 |
| EcoRI | GAATTC | 1 cut(s) | 766 |
| EcoRII | CCWGG | 3 cut(s) | 740, 1039, 1147 |
| EcoT38I | GRGCYC | 3 cut(s) | 542, 1146, 1734 |
| FaeI | CATG | 2 cut(s) | 776, 1234 |
| FaqI | GGGAC | 2 cut(s) | 834, 1018 |
| FatI | CATG | 2 cut(s) | 772, 1230 |
| FauI | CCCGC | 3 cut(s) | 593, 1087, 1466 |
| FauNDI | CATATG | 1 cut(s) | 1329 |
| FbaI | TGATCA | 1 cut(s) | 1678 |
| FblI | GTMKAC | 1 cut(s) | 1593 |
| Fnu4HI | GCNGC | 7 cut(s) | 62, 112, 354, 1083, 1375, 1435, 1655 |
| FokI | GGATG | 7 cut(s) | 420, 556, 889, 1152, 1382, 1393, 1679 |
| FriOI | GRGCYC | 3 cut(s) | 542, 1146, 1734 |
| Fsp4HI | GCNGC | 7 cut(s) | 62, 112, 354, 1083, 1375, 1435, 1655 |
| FspBI | CTAG | 6 cut(s) | 18, 450, 564, 657, 732, 921 |
| GlaI | GCGC | 1 cut(s) | 887 |
| GluI | GCNGC | 7 cut(s) | 62, 112, 354, 1083, 1375, 1435, 1655 |
| GsuI | CTGGAG | 1 cut(s) | 822 |
| HaeIII | GGCC | 7 cut(s) | 215, 607, 721, 745, 1015, 1158, 1528 |
| HapII | CCGG | 3 cut(s) | 67, 139, 1525 |
| HgaI | GACGC | 1 cut(s) | 151 |
| HhaI | GCGC | 1 cut(s) | 888 |
| Hin1I | GRCGYC | 1 cut(s) | 1590 |
| Hin1II | CATG | 2 cut(s) | 776, 1234 |
| Hin6I | GCGC | 1 cut(s) | 886 |
| HinP1I | GCGC | 1 cut(s) | 886 |
| HinfI | GANTC | 7 cut(s) | 23, 98, 133, 167, 335, 466, 1494 |
| HpaII | CCGG | 3 cut(s) | 67, 139, 1525 |
| HphI | GGTGA | 3 cut(s) | 196, 846, 1104 |
| Hpy166II | GTNNAC | 3 cut(s) | 926, 1163, 1594 |
| Hpy8I | GTNNAC | 3 cut(s) | 926, 1163, 1594 |
| Hpy99I | CGWCG | 2 cut(s) | 107, 816 |
| HpyCH4III | ACNGT | 4 cut(s) | 368, 1107, 1556, 1661 |
| HpyCH4IV | ACGT | 3 cut(s) | 811, 928, 1590 |
| HpyCH4V | TGCA | 7 cut(s) | 389, 485, 709, 758, 1477, 1571, 1657 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 67, 403 |
| HpyF3I | CTNAG | 9 cut(s) | 77, 349, 393, 423, 541, 992, 1194, 1389, 1577 |
| HpySE526I | ACGT | 3 cut(s) | 811, 928, 1590 |
| Hsp92I | GRCGYC | 1 cut(s) | 1590 |
| Hsp92II | CATG | 2 cut(s) | 776, 1234 |
| HspAI | GCGC | 1 cut(s) | 886 |
| Ksp22I | TGATCA | 1 cut(s) | 1678 |
| Kzo9I | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| LguI | GCTCTTC | 3 cut(s) | 478, 688, 1634 |
| LmnI | GCTCC | 2 cut(s) | 361, 920 |
| Lsp1109I | GCAGC | 6 cut(s) | 73, 123, 340, 1069, 1386, 1641 |
| LweI | GCATC | 7 cut(s) | 398, 494, 851, 1404, 1460, 1603, 1720 |
| MaeI | CTAG | 6 cut(s) | 18, 450, 564, 657, 732, 921 |
| MaeII | ACGT | 3 cut(s) | 811, 928, 1590 |
| MaeIII | GTNAC | 4 cut(s) | 151, 428, 463, 636 |
| MalI | GATC | 9 cut(s) | 120, 211, 243, 379, 643, 703, 1224, 1402, 1680 |
| MbiI | CCGCTC | 1 cut(s) | 588 |
| MboI | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MflI | RGATCY | 1 cut(s) | 118 |
| MhlI | GDGCHC | 5 cut(s) | 542, 1146, 1277, 1646, 1734 |
| MluCI | AATT | 6 cut(s) | 85, 188, 204, 750, 766, 1017 |
| MlyI | GAGTC | 2 cut(s) | 460, 1503 |
| MmeI | TCCRAC | 5 cut(s) | 13, 126, 641, 794, 1348 |
| MroXI | GAANNNNTTC | 1 cut(s) | 457 |
| MseI | TTAA | 2 cut(s) | 371, 531 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| MspA1I | CMGCKG | 2 cut(s) | 863, 1082 |
| MspI | CCGG | 3 cut(s) | 67, 139, 1525 |
| MspR9I | CCNGG | 3 cut(s) | 742, 1041, 1149 |
| MunI | CAATTG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 1 cut(s) | 19 |
| MvaI | CCWGG | 3 cut(s) | 742, 1041, 1149 |
| MvnI | CGCG | 1 cut(s) | 1434 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 67, 403 |
| NdeI | CATATG | 1 cut(s) | 1329 |
| NdeII | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| NlaIII | CATG | 2 cut(s) | 776, 1234 |
| NlaIV | GGNNCC | 3 cut(s) | 1034, 1157, 1687 |
| NmuCI | GTSAC | 2 cut(s) | 463, 636 |
| NspI | RCATGY | 1 cut(s) | 776 |
| PceI | AGGCCT | 1 cut(s) | 607 |
| PciSI | GCTCTTC | 3 cut(s) | 478, 688, 1634 |
| PctI | GAATGC | 1 cut(s) | 19 |
| PdmI | GAANNNNTTC | 1 cut(s) | 457 |
| PfeI | GAWTC | 5 cut(s) | 23, 98, 133, 167, 335 |
| PkrI | GCNGC | 7 cut(s) | 63, 113, 355, 1084, 1376, 1436, 1656 |
| PleI | GAGTC | 2 cut(s) | 460, 1502 |
| PpsI | GAGTC | 2 cut(s) | 460, 1502 |
| Ppu21I | YACGTR | 1 cut(s) | 929 |
| PpuMI | RGGWCCY | 2 cut(s) | 1032, 1685 |
| PsiI | TTATAA | 1 cut(s) | 1738 |
| Psp124BI | GAGCTC | 1 cut(s) | 542 |
| Psp5II | RGGWCCY | 2 cut(s) | 1032, 1685 |
| Psp6I | CCWGG | 3 cut(s) | 740, 1039, 1147 |
| PspGI | CCWGG | 3 cut(s) | 740, 1039, 1147 |
| PspN4I | GGNNCC | 3 cut(s) | 1034, 1157, 1687 |
| PspPI | GGNCC | 4 cut(s) | 720, 1032, 1156, 1685 |
| PspPPI | RGGWCCY | 2 cut(s) | 1032, 1685 |
| PstNI | CAGNNNCTG | 2 cut(s) | 386, 1454 |
| PsuI | RGATCY | 1 cut(s) | 118 |
| PvuII | CAGCTG | 1 cut(s) | 863 |
| RsaI | GTAC | 4 cut(s) | 667, 739, 1164, 1610 |
| RsaNI | GTAC | 4 cut(s) | 666, 738, 1163, 1609 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| SacI | GAGCTC | 1 cut(s) | 542 |
| SapI | GCTCTTC | 3 cut(s) | 478, 688, 1634 |
| SaqAI | TTAA | 2 cut(s) | 371, 531 |
| SatI | GCNGC | 7 cut(s) | 62, 112, 354, 1083, 1375, 1435, 1655 |
| Sau3AI | GATC | 9 cut(s) | 118, 209, 241, 377, 641, 701, 1222, 1400, 1678 |
| Sau96I | GGNCC | 4 cut(s) | 720, 1032, 1156, 1685 |
| SchI | GAGTC | 2 cut(s) | 460, 1503 |
| ScrFI | CCNGG | 3 cut(s) | 742, 1041, 1149 |
| SduI | GDGCHC | 5 cut(s) | 542, 1146, 1277, 1646, 1734 |
| SfaNI | GCATC | 7 cut(s) | 398, 494, 851, 1404, 1460, 1603, 1720 |
| SfcI | CTRYAG | 2 cut(s) | 597, 1266 |
| SgrAI | CRCCGGYG | 1 cut(s) | 66 |
| SinI | GGWCC | 2 cut(s) | 1032, 1685 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| SmlI | CTYRAG | 3 cut(s) | 715, 1123, 1438 |
| SmoI | CTYRAG | 3 cut(s) | 715, 1123, 1438 |
| Sse9I | AATT | 6 cut(s) | 85, 188, 204, 750, 766, 1017 |
| SseBI | AGGCCT | 1 cut(s) | 607 |
| SsiI | CCGC | 8 cut(s) | 257, 586, 934, 983, 1080, 1434, 1459, 1586 |
| SspI | AATATT | 1 cut(s) | 46 |
| SspMI | CTAG | 6 cut(s) | 18, 450, 564, 657, 732, 921 |
| SstI | GAGCTC | 1 cut(s) | 542 |
| StuI | AGGCCT | 1 cut(s) | 607 |
| StyD4I | CCNGG | 3 cut(s) | 740, 1039, 1147 |
| TaaI | ACNGT | 4 cut(s) | 368, 1107, 1556, 1661 |
| TaiI | ACGT | 3 cut(s) | 814, 931, 1593 |
| TaqI | TCGA | 5 cut(s) | 128, 700, 781, 1298, 1311 |
| TasI | AATT | 6 cut(s) | 85, 188, 204, 750, 766, 1017 |
| TatI | WGTACW | 1 cut(s) | 1162 |
| TauI | GCSGC | 1 cut(s) | 1437 |
| TfiI | GAWTC | 5 cut(s) | 23, 98, 133, 167, 335 |
| Tru1I | TTAA | 2 cut(s) | 371, 531 |
| Tru9I | TTAA | 2 cut(s) | 371, 531 |
| TscAI | CASTG | 5 cut(s) | 468, 711, 1177, 1282, 1561 |
| TseFI | GTSAC | 2 cut(s) | 463, 636 |
| TseI | GCWGC | 6 cut(s) | 61, 111, 353, 1082, 1374, 1654 |
| Tsp45I | GTSAC | 2 cut(s) | 463, 636 |
| TspDTI | ATGAA | 6 cut(s) | 20, 180, 309, 810, 1073, 1535 |
| TspGWI | ACGGA | 2 cut(s) | 39, 1482 |
| TspRI | CASTG | 5 cut(s) | 468, 711, 1177, 1282, 1561 |
| VpaK11BI | GGWCC | 2 cut(s) | 1032, 1685 |
| XapI | RAATTY | 3 cut(s) | 85, 750, 766 |
| XbaI | TCTAGA | 1 cut(s) | 656 |
| XceI | RCATGY | 1 cut(s) | 776 |
| XmiI | GTMKAC | 1 cut(s) | 1593 |
| XmnI | GAANNNNTTC | 1 cut(s) | 457 |
| XspI | CTAG | 6 cut(s) | 18, 450, 564, 657, 732, 921 |
| ZraI | GACGTC | 1 cut(s) | 1591 |