Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0019576

Physical Location & Seq

Genomic Coordinates Forward (+)

160287 .. 162425

Gene Structure 2139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G001200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGATGAAAAACCCAGAATCAAGCCTGCCACCAGGGTTTAGGTTCCACCCCACAGATGAAGAGCTCATCCTTCACTACCTTACAAAGAAGGTGGCCTCCACACCCTTACCCGTTTCCATCATCGCGGAAGTTGATATCTACAAGTTTGATCCATGGGAATTACCAGCCAAAGCTGCGTTTGGTGAGAAAGAATGGTACTTCTTTAGTCCTAGAGATCGCAAGTACCCGAATGGCGCAAGGCCAAACAGGGCAGCCGCGTCAGGGTACTGGAAGGCAACAGGAACAGATAAGACGATTGTGGCGTCATTAGGAGGACGCCAGAACGTTGGTGTGAAGAAGGCTCTTGTCTTCTACAAGGGAAGACCCCCTAAAGGAATCAAGACCAACTGGATCATGCATGAATATCGCCTTCCAGAGAATCCAAACAACTACACCACCACCACCAAAACCATGAAGCTCAAAGATTTATCCATGAGGTTGGATGATTGGGTTCTCTGTCGAATCTACAAGAAGTCCAACGTCTCAAGTTCAGCAGCGGTGCCGCCAATCGATCATGAAGAAGAAGTTGAAGAAGAAGAAGATTTTCTCCATGATGTCCTGTTACCAAGCCTGAAAAGTCCCCTTCCCGGCCTTGGTCACAACATGAGTACTAATAATACTGGTCTCAAGCCCCAGAAATCTTCTTCCTTCTCCAACTTACTAGACGTCATGGACTACTCATTACTCACTAGTTTTCTGGCGGATGGCCAATACTCTAACCCAACTGGAACCGGACTCCAATCAACTCCGAATAGGTTTCCCTGTTCCGGGACTACTGGTTTAGACCAGAAACCGCTGTTCATTAATGACTATTCCAATATCAGCAGCAGCAGCAGCAGCAACAGTCATTTGCTTCAAAAGCTCCCTCAATTCAATGGTTTGAACTTGCCAGGAATCCCAAGCACCGAAAACCGGCTCAAGCGCCATGATCATCCAATTGCAGATGATCATGGTCTACTATACCCATCAAAGAAATACGTCAATTCTAATTGCAGTTTCAATAACGCAACGATTCAGTCCGACAATATCTCTCAAGGACACTTACTCAACCATTCATTGTTGAATCATCAGCAATTAGTATTGAGTAGTCCTCAGTTCCAGTTTCAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009825 GO:0009835 GO:0009889 GO:0009908 GO:0009987 GO:0010150 GO:0010154 GO:0010468 GO:0010556 GO:0016049 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071695 GO:0080090 GO:0090567 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

384

Amino Acids

42.91

Weight (kDa)

8.23

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04070 AT3G04070
malus_domestica	MD12G1000800.v1.1 MD14G1001000.v1.1
prunus_persica	Prupe.7G001200_v2.0.a1
pyrus_communis	pycom12g00080 pycom49g00050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	708
AccB1I	GGYRCC	1 cut(s)	538
AccI	GTMKAC	1 cut(s)	994
AccII	CGCG	2 cut(s)	125, 257
AciI	CCGC	6 cut(s)	125, 255, 536, 542, 740, 833
AclI	AACGTT	1 cut(s)	324
AclWI	GGATC	2 cut(s)	143, 398
AcoI	YGGCCR	1 cut(s)	745
AcyI	GRCGYC	3 cut(s)	302, 316, 705
AfaI	GTAC	4 cut(s)	197, 224, 266, 649
AfiI	CCNNNNNNNGG	7 cut(s)	261, 371, 626, 632, 806, 807, 951
AgsI	TTSAA	7 cut(s)	569, 896, 913, 922, 1039, 1102, 1145
AhlI	ACTAGT	1 cut(s)	728
AjnI	CCWGG	2 cut(s)	31, 928
AluBI	AGCT	4 cut(s)	64, 173, 457, 901
AluI	AGCT	4 cut(s)	64, 173, 457, 901
Alw21I	GWGCWC	1 cut(s)	66
Alw26I	GTCTC	2 cut(s)	526, 668
AlwI	GGATC	2 cut(s)	143, 398
AoxI	GGCC	4 cut(s)	93, 239, 628, 745
ApeKI	GCWGC	8 cut(s)	173, 251, 533, 864, 867, 870, 873, 876
AseI	ATTAAT	1 cut(s)	843
Asp700I	GAANNNNTTC	1 cut(s)	582
AspLEI	GCGC	2 cut(s)	236, 963
AsuC2I	CCSGG	2 cut(s)	627, 808
AsuHPI	GGTGA	1 cut(s)	194
BalI	TGGCCA	1 cut(s)	747
BanI	GGYRCC	1 cut(s)	538
BanII	GRGCYC	1 cut(s)	66
BbsI	GAAGAC	2 cut(s)	340, 367
Bbv12I	GWGCWC	1 cut(s)	66
BbvI	GCAGC	8 cut(s)	160, 263, 545, 876, 879, 882, 885, 888
BccI	CCATC	3 cut(s)	125, 737, 1012
BcgI	CGANNNNNNTGC	2 cut(s)	386, 420
BciT130I	CCWGG	2 cut(s)	33, 930
BclI	TGATCA	2 cut(s)	967, 985
BcnI	CCSGG	2 cut(s)	627, 808
BcoDI	GTCTC	2 cut(s)	526, 668
BcuI	ACTAGT	1 cut(s)	728
BfaI	CTAG	3 cut(s)	210, 701, 729
BfoI	RGCGCY	1 cut(s)	964
BmcAI	AGTACT	1 cut(s)	649
Bme1390I	CCNGG	4 cut(s)	33, 627, 808, 930
BmiI	GGNNCC	3 cut(s)	44, 540, 769
BmrFI	CCNGG	4 cut(s)	33, 627, 808, 930
BpiI	GAAGAC	2 cut(s)	340, 367
BplI	GAGNNNNNCTC	2 cut(s)	1114, 1146
BpuEI	CTTGAG	4 cut(s)	508, 650, 941, 1056
BpuMI	CCSGG	2 cut(s)	627, 808
Bsa29I	ATCGAT	1 cut(s)	549
BsaHI	GRCGYC	3 cut(s)	302, 316, 705
BsaI	GGTCTC	1 cut(s)	668
BsaJI	CCNNGG	3 cut(s)	32, 152, 631
BsaWI	WCCGGW	1 cut(s)	770
Bsc4I	CCNNNNNNNGG	7 cut(s)	261, 371, 626, 632, 806, 807, 951
Bse118I	RCCGGY	1 cut(s)	951
Bse1I	ACTGG	6 cut(s)	272, 392, 664, 769, 820, 1138
BseBI	CCWGG	2 cut(s)	33, 930
BseCI	ATCGAT	1 cut(s)	549
BseDI	CCNNGG	3 cut(s)	32, 152, 631
BseGI	GGATG	4 cut(s)	66, 487, 748, 970
BseLI	CCNNNNNNNGG	7 cut(s)	261, 371, 626, 632, 806, 807, 951
BseMII	CTCAG	1 cut(s)	1145
BseNI	ACTGG	6 cut(s)	272, 392, 664, 769, 820, 1138
BseXI	GCAGC	8 cut(s)	160, 263, 545, 876, 879, 882, 885, 888
Bsh1236I	CGCG	2 cut(s)	125, 257
BshFI	GGCC	4 cut(s)	95, 241, 630, 747
BshNI	GGYRCC	1 cut(s)	538
BshVI	ATCGAT	1 cut(s)	549
BsiHKAI	GWGCWC	1 cut(s)	66
BsiSI	CCGG	4 cut(s)	627, 771, 807, 952
BslFI	GGGAC	2 cut(s)	603, 823
BslI	CCNNNNNNNGG	7 cut(s)	261, 371, 626, 632, 806, 807, 951
BsmAI	GTCTC	2 cut(s)	526, 668
BsmBI	CGTCTC	1 cut(s)	526
BsmFI	GGGAC	2 cut(s)	603, 823
BsnI	GGCC	4 cut(s)	95, 241, 630, 747
Bso31I	GGTCTC	1 cut(s)	668
Bsp1286I	GDGCHC	1 cut(s)	66
Bsp143I	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
Bsp19I	CCATGG	1 cut(s)	152
BspACI	CCGC	6 cut(s)	125, 255, 536, 542, 740, 833
BspANI	GGCC	4 cut(s)	95, 241, 630, 747
BspCNI	CTCAG	1 cut(s)	1144
BspDI	ATCGAT	1 cut(s)	549
BspFNI	CGCG	2 cut(s)	125, 257
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	3 cut(s)	44, 540, 769
BspPI	GGATC	2 cut(s)	143, 398
BspQI	GCTCTTC	1 cut(s)	54
BspT107I	GGYRCC	1 cut(s)	538
BspTNI	GGTCTC	1 cut(s)	668
BsrFI	RCCGGY	1 cut(s)	951
BsrI	ACTGG	6 cut(s)	272, 392, 664, 769, 820, 1138
BssAI	RCCGGY	1 cut(s)	951
BssECI	CCNNGG	3 cut(s)	32, 152, 631
BssMI	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
BssNI	GRCGYC	3 cut(s)	302, 316, 705
BssT1I	CCWWGG	2 cut(s)	152, 631
Bst2UI	CCWGG	2 cut(s)	33, 930
Bst4CI	ACNGT	1 cut(s)	884
Bst6I	CTCTTC	1 cut(s)	54
BstACI	GRCGYC	3 cut(s)	302, 316, 705
BstC8I	GCNNGC	1 cut(s)	26
BstDEI	CTNAG	1 cut(s)	1131
BstDSI	CCRYGG	1 cut(s)	152
BstF5I	GGATG	4 cut(s)	66, 487, 748, 970
BstFNI	CGCG	2 cut(s)	125, 257
BstH2I	RGCGCY	1 cut(s)	964
BstHHI	GCGC	2 cut(s)	236, 963
BstKTI	GATC	6 cut(s)	151, 217, 393, 553, 970, 988
BstMAI	GTCTC	2 cut(s)	526, 668
BstMBI	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
BstMWI	GCNNNNNNNGC	5 cut(s)	173, 870, 873, 876, 898
BstNI	CCWGG	2 cut(s)	33, 930
BstSCI	CCNGG	4 cut(s)	31, 625, 806, 928
BstUI	CGCG	2 cut(s)	125, 257
BstV1I	GCAGC	8 cut(s)	160, 263, 545, 876, 879, 882, 885, 888
BstV2I	GAAGAC	2 cut(s)	340, 367
BstXI	CCANNNNNNTGG	2 cut(s)	326, 478
Bsu15I	ATCGAT	1 cut(s)	549
BsuRI	GGCC	4 cut(s)	95, 241, 630, 747
BsuTUI	ATCGAT	1 cut(s)	549
BtgI	CCRYGG	1 cut(s)	152
BtgZI	GCGATG	1 cut(s)	106
BtsCI	GGATG	4 cut(s)	66, 487, 748, 970
Cac8I	GCNNGC	1 cut(s)	26
CciI	TCATGA	1 cut(s)	553
CfoI	GCGC	2 cut(s)	236, 963
Cfr10I	RCCGGY	1 cut(s)	951
ClaI	ATCGAT	1 cut(s)	549
CseI	GACGC	3 cut(s)	246, 291, 324
Csp6I	GTAC	4 cut(s)	196, 223, 265, 648
CspCI	CAANNNNNGTGG	2 cut(s)	72, 107
CviQI	GTAC	4 cut(s)	196, 223, 265, 648
DdeI	CTNAG	1 cut(s)	1131
DpnI	GATC	6 cut(s)	150, 216, 392, 552, 969, 987
DpnII	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
EaeI	YGGCCR	1 cut(s)	745
Eam1104I	CTCTTC	1 cut(s)	54
EarI	CTCTTC	1 cut(s)	54
EciI	GGCGGA	1 cut(s)	755
Ecl136II	GAGCTC	1 cut(s)	64
Eco130I	CCWWGG	2 cut(s)	152, 631
Eco24I	GRGCYC	1 cut(s)	66
Eco31I	GGTCTC	1 cut(s)	668
Eco32I	GATATC	1 cut(s)	136
Eco53kI	GAGCTC	1 cut(s)	64
EcoICRI	GAGCTC	1 cut(s)	64
EcoRII	CCWGG	2 cut(s)	31, 928
EcoRV	GATATC	1 cut(s)	136
EcoT14I	CCWWGG	2 cut(s)	152, 631
EcoT22I	ATGCAT	1 cut(s)	399
EcoT38I	GRGCYC	1 cut(s)	66
ErhI	CCWWGG	2 cut(s)	152, 631
Esp3I	CGTCTC	1 cut(s)	526
FaqI	GGGAC	2 cut(s)	603, 823
FbaI	TGATCA	2 cut(s)	967, 985
FblI	GTMKAC	1 cut(s)	994
FokI	GGATG	4 cut(s)	53, 494, 755, 957
FriOI	GRGCYC	1 cut(s)	66
FspBI	CTAG	3 cut(s)	210, 701, 729
GlaI	GCGC	2 cut(s)	235, 962
HaeII	RGCGCY	1 cut(s)	964
HaeIII	GGCC	4 cut(s)	95, 241, 630, 747
HapII	CCGG	4 cut(s)	627, 771, 807, 952
HgaI	GACGC	3 cut(s)	246, 291, 324
HhaI	GCGC	2 cut(s)	236, 963
Hin1I	GRCGYC	3 cut(s)	302, 316, 705
Hin6I	GCGC	2 cut(s)	234, 961
HinP1I	GCGC	2 cut(s)	234, 961
HinfI	GANTC	8 cut(s)	17, 375, 418, 501, 774, 933, 1051, 1102
HpaII	CCGG	4 cut(s)	627, 771, 807, 952
HphI	GGTGA	1 cut(s)	194
Hpy166II	GTNNAC	1 cut(s)	995
Hpy188I	TCNGA	2 cut(s)	789, 1060
Hpy188III	TCNNGA	4 cut(s)	379, 413, 554, 1145
Hpy8I	GTNNAC	1 cut(s)	995
HpyAV	CCTTC	7 cut(s)	80, 82, 265, 331, 419, 632, 697
HpyCH4III	ACNGT	1 cut(s)	884
HpyCH4IV	ACGT	4 cut(s)	324, 519, 705, 1017
HpyCH4V	TGCA	3 cut(s)	397, 980, 1032
HpyF10VI	GCNNNNNNNGC	5 cut(s)	173, 870, 873, 876, 898
HpyF3I	CTNAG	1 cut(s)	1131
HpySE526I	ACGT	4 cut(s)	324, 519, 705, 1017
Hsp92I	GRCGYC	3 cut(s)	302, 316, 705
HspAI	GCGC	2 cut(s)	234, 961
Ksp22I	TGATCA	2 cut(s)	967, 985
Kzo9I	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
LguI	GCTCTTC	1 cut(s)	54
LmnI	GCTCC	1 cut(s)	906
Lsp1109I	GCAGC	8 cut(s)	160, 263, 545, 876, 879, 882, 885, 888
MaeI	CTAG	3 cut(s)	210, 701, 729
MaeII	ACGT	4 cut(s)	324, 519, 705, 1017
MaeIII	GTNAC	2 cut(s)	600, 635
MalI	GATC	6 cut(s)	150, 216, 392, 552, 969, 987
MboI	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
MfeI	CAATTG	1 cut(s)	975
MhlI	GDGCHC	1 cut(s)	66
MlsI	TGGCCA	1 cut(s)	747
MluCI	AATT	6 cut(s)	158, 908, 975, 1021, 1027, 1112
MluNI	TGGCCA	1 cut(s)	747
MlyI	GAGTC	1 cut(s)	768
MmeI	TCCRAC	4 cut(s)	459, 540, 717, 1083
MnlI	CCTC	5 cut(s)	106, 305, 468, 915, 1140
Mox20I	TGGCCA	1 cut(s)	747
Mph1103I	ATGCAT	1 cut(s)	399
MroXI	GAANNNNTTC	1 cut(s)	582
MscI	TGGCCA	1 cut(s)	747
MseI	TTAA	1 cut(s)	843
Msp20I	TGGCCA	1 cut(s)	747
MspA1I	CMGCKG	2 cut(s)	536, 835
MspI	CCGG	4 cut(s)	627, 771, 807, 952
MspR9I	CCNGG	4 cut(s)	33, 627, 808, 930
MunI	CAATTG	1 cut(s)	975
MvaI	CCWGG	2 cut(s)	33, 930
MvnI	CGCG	2 cut(s)	125, 257
MwoI	GCNNNNNNNGC	5 cut(s)	173, 870, 873, 876, 898
NciI	CCSGG	2 cut(s)	627, 808
NcoI	CCATGG	1 cut(s)	152
NdeII	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
NlaIV	GGNNCC	3 cut(s)	44, 540, 769
NmuCI	GTSAC	1 cut(s)	635
NsiI	ATGCAT	1 cut(s)	399
PagI	TCATGA	1 cut(s)	553
PciSI	GCTCTTC	1 cut(s)	54
PcsI	WCGNNNNNNNCGW	1 cut(s)	299
PdmI	GAANNNNTTC	1 cut(s)	582
PfeI	GAWTC	7 cut(s)	17, 375, 418, 501, 933, 1051, 1102
PfoI	TCCNGGA	1 cut(s)	806
PleI	GAGTC	1 cut(s)	768
PpsI	GAGTC	1 cut(s)	768
PshBI	ATTAAT	1 cut(s)	843
Psp124BI	GAGCTC	1 cut(s)	66
Psp1406I	AACGTT	1 cut(s)	324
Psp6I	CCWGG	2 cut(s)	31, 928
PspGI	CCWGG	2 cut(s)	31, 928
PspN4I	GGNNCC	3 cut(s)	44, 540, 769
RsaI	GTAC	4 cut(s)	197, 224, 266, 649
RsaNI	GTAC	4 cut(s)	196, 223, 265, 648
SacI	GAGCTC	1 cut(s)	66
SapI	GCTCTTC	1 cut(s)	54
SaqAI	TTAA	1 cut(s)	843
Sau3AI	GATC	6 cut(s)	148, 214, 390, 550, 967, 985
ScaI	AGTACT	1 cut(s)	649
SchI	GAGTC	1 cut(s)	768
ScrFI	CCNGG	4 cut(s)	33, 627, 808, 930
SduI	GDGCHC	1 cut(s)	66
SmlI	CTYRAG	4 cut(s)	523, 665, 956, 1071
SmoI	CTYRAG	4 cut(s)	523, 665, 956, 1071
SpeI	ACTAGT	1 cut(s)	728
Sse9I	AATT	6 cut(s)	158, 908, 975, 1021, 1027, 1112
SsiI	CCGC	6 cut(s)	125, 255, 536, 542, 740, 833
SspMI	CTAG	3 cut(s)	210, 701, 729
SstI	GAGCTC	1 cut(s)	66
StyD4I	CCNGG	4 cut(s)	31, 625, 806, 928
StyI	CCWWGG	2 cut(s)	152, 631
TaaI	ACNGT	1 cut(s)	884
TaiI	ACGT	4 cut(s)	327, 522, 708, 1020
TaqI	TCGA	2 cut(s)	499, 549
TasI	AATT	6 cut(s)	158, 908, 975, 1021, 1027, 1112
TatI	WGTACW	1 cut(s)	647
TauI	GCSGC	2 cut(s)	257, 544
TfiI	GAWTC	7 cut(s)	17, 375, 418, 501, 933, 1051, 1102
Tru1I	TTAA	1 cut(s)	843
Tru9I	TTAA	1 cut(s)	843
TseFI	GTSAC	1 cut(s)	635
TseI	GCWGC	8 cut(s)	173, 251, 533, 864, 867, 870, 873, 876
Tsp45I	GTSAC	1 cut(s)	635
TspDTI	ATGAA	7 cut(s)	20, 72, 414, 467, 570, 829, 1083
VspI	ATTAAT	1 cut(s)	843
XmiI	GTMKAC	1 cut(s)	994
XmnI	GAANNNNTTC	1 cut(s)	582
XspI	CTAG	3 cut(s)	210, 701, 729
ZraI	GACGTC	1 cut(s)	706
ZrmI	AGTACT	1 cut(s)	649
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.