Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0020256

Physical Location & Seq

Genomic Coordinates Forward (+)

195084 .. 200457

Gene Structure 5374 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G001300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGAATTCCCAAATGAAAGGCACCACCACCACCGTCATCATCAGAGGGATGATGATGAAGAAAGACAGAATTACCCACCACCCGGAACTGGCTTTGATCAACCTCCACCTCCACCTCCACCTTCATATTATAGAGAAGATCAACCTCCACCTTCCTATTATGGAGTAGATCAACCTCCACCTTTATACTATGGAGAAGATCAACCACCCCCAAATTCATACTATGGAGGAGCAGATAGACCTCCACCTACCCAAGTGAGCCACGTGTCCCACTCTTCCTTCCATGGTCATCCGCCTCCACCCTCCCAAGGCTTTCTTCACCAACCACCGCCACCCCCAGTTCACTCTTTCAACTATCAATCTGAAGAACCTACTCCACCTGTTACTGTGCATCATGTTGCTCATCAAGTTCACCATGACCAACAGTCCCCTGCTCAATTTGAAACCCATCACACTTCTCACACTTCTCATTTGCCCTCCTTCCATCCCCATGCCTCCTCCTCTTACTTCTCAAACAAACCCACTTTCAGAGTCTTCACAAAGGCTGACCCCAATTTCCCTCTCGCCATCACAGAGGGAAAGGTCATTCTTGCCCGCTCCCATGAAACCGATGACTTCCAGCACTGGTACAAAGATGAGAAGTACAGCACAAGGGTGAAGGATGAGGAGCGCTTCCCGTCCTTTGCTCTGGTTAACAAAGCCACCGGGCAGGCTCTCAAGCATTCCATTGGAGCCACTCATCCTGTGCAGCTGATACCTTATAATCCAGATATTCTTGATGAGTCTATACTATGGACTGAGAGTGCGGACCTAGGTGATGGTTTCAGAACTGTTAGGATGGTTAATAATATTCGCCTTAATCTGGATGCTTTTCATGGTGATAAGAAATCTGGAGGTGTTCATGATGGCACTATCATAGTTCTGTGGAATAAAAACAAAGGAGATAACCAGCGATGGAAGATTGTACCTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010118 GO:0030246 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0090332 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

325

Amino Acids

36.97

Weight (kDa)

6.21

Isoelectric Point (pI)

55.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0020256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39050
malus_domestica	MD12G1000900.v1.1 MD14G1001100.v1.1
prunus_persica	Prupe.7G001300_v2.0.a1 Prupe.7G001300_v2.0.a1
pyrus_communis	pycom49g00060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	762
AccB1I	GGYRCC	1 cut(s)	21
AccBSI	CCGCTC	1 cut(s)	597
AciI	CCGC	4 cut(s)	293, 329, 595, 806
AcsI	RAATTY	2 cut(s)	5, 214
AcuI	CTGAAG	1 cut(s)	384
AcvI	CACGTG	1 cut(s)	265
AfaI	GTAC	3 cut(s)	629, 644, 966
AfeI	AGCGCT	1 cut(s)	671
AfiI	CCNNNNNNNGG	4 cut(s)	83, 89, 308, 862
AflIII	ACRYGT	1 cut(s)	264
AgsI	TTSAA	2 cut(s)	352, 443
AhdI	GACNNNNNGTC	1 cut(s)	424
AjuI	GAANNNNNNNTTGG	2 cut(s)	300, 332
AleI	CACNNNNGTG	1 cut(s)	653
AluBI	AGCT	1 cut(s)	751
AluI	AGCT	1 cut(s)	751
Aor51HI	AGCGCT	1 cut(s)	671
ApeKI	GCWGC	1 cut(s)	748
ApoI	RAATTY	2 cut(s)	5, 214
AspA2I	CCTAGG	1 cut(s)	811
AspLEI	GCGC	1 cut(s)	672
AspS9I	GGNCC	1 cut(s)	808
AsuC2I	CCSGG	2 cut(s)	84, 706
AsuHPI	GGTGA	5 cut(s)	311, 404, 667, 827, 890
AvaII	GGWCC	1 cut(s)	808
AvrII	CCTAGG	1 cut(s)	811
BanI	GGYRCC	1 cut(s)	21
BbrPI	CACGTG	1 cut(s)	265
BbsI	GAAGAC	1 cut(s)	526
BbvI	GCAGC	1 cut(s)	760
BccI	CCATC	7 cut(s)	456, 492, 575, 812, 832, 899, 948
BclI	TGATCA	1 cut(s)	97
BcnI	CCSGG	2 cut(s)	84, 706
BfaI	CTAG	1 cut(s)	812
BfoI	RGCGCY	1 cut(s)	673
BisI	GCNGC	1 cut(s)	749
BlnI	CCTAGG	1 cut(s)	811
BlsI	GCNGC	1 cut(s)	750
Bme1390I	CCNGG	2 cut(s)	84, 706
Bme18I	GGWCC	1 cut(s)	808
BmeRI	GACNNNNNGTC	1 cut(s)	424
BmgT120I	GGNCC	1 cut(s)	808
BmiI	GGNNCC	2 cut(s)	23, 733
BmrFI	CCNGG	2 cut(s)	84, 706
BmrI	ACTGGG	1 cut(s)	332
BmsI	GCATC	2 cut(s)	400, 856
BmuI	ACTGGG	1 cut(s)	332
BpiI	GAAGAC	1 cut(s)	526
BpmI	CTGGAG	1 cut(s)	912
BpuEI	CTTGAG	1 cut(s)	701
BpuMI	CCSGG	2 cut(s)	84, 706
BsaAI	YACGTR	1 cut(s)	265
BsaJI	CCNNGG	3 cut(s)	283, 307, 811
Bsc4I	CCNNNNNNNGG	4 cut(s)	83, 89, 308, 862
Bse1I	ACTGG	3 cut(s)	94, 338, 629
BseDI	CCNNGG	3 cut(s)	283, 307, 811
BseGI	GGATG	7 cut(s)	55, 289, 484, 667, 739, 843, 871
BseLI	CCNNNNNNNGG	4 cut(s)	83, 89, 308, 862
BseMII	CTCAG	1 cut(s)	789
BseNI	ACTGG	3 cut(s)	94, 338, 629
BseRI	GAGGAG	4 cut(s)	243, 487, 490, 680
BseXI	GCAGC	1 cut(s)	760
BsgI	GTGCAG	1 cut(s)	767
BshNI	GGYRCC	1 cut(s)	21
BsiSI	CCGG	2 cut(s)	84, 705
BslFI	GGGAC	2 cut(s)	253, 412
BslI	CCNNNNNNNGG	4 cut(s)	83, 89, 308, 862
BsmFI	GGGAC	2 cut(s)	253, 412
BsmI	GAATGC	1 cut(s)	721
Bsp143I	GATC	4 cut(s)	97, 139, 169, 199
Bsp19I	CCATGG	1 cut(s)	283
BspACI	CCGC	4 cut(s)	293, 329, 595, 806
BspCNI	CTCAG	1 cut(s)	790
BspHI	TCATGA	1 cut(s)	901
BspLI	GGNNCC	2 cut(s)	23, 733
BspT107I	GGYRCC	1 cut(s)	21
BsrBI	CCGCTC	1 cut(s)	597
BsrI	ACTGG	3 cut(s)	94, 338, 629
BssECI	CCNNGG	3 cut(s)	283, 307, 811
BssMI	GATC	4 cut(s)	97, 139, 169, 199
BssT1I	CCWWGG	3 cut(s)	283, 307, 811
Bst4CI	ACNGT	4 cut(s)	35, 388, 426, 832
Bst6I	CTCTTC	1 cut(s)	280
BstBAI	YACGTR	1 cut(s)	265
BstC8I	GCNNGC	2 cut(s)	595, 711
BstDEI	CTNAG	1 cut(s)	798
BstDSI	CCRYGG	1 cut(s)	283
BstF5I	GGATG	7 cut(s)	55, 289, 484, 667, 739, 843, 871
BstH2I	RGCGCY	1 cut(s)	673
BstHHI	GCGC	1 cut(s)	672
BstKTI	GATC	4 cut(s)	100, 142, 172, 202
BstMBI	GATC	4 cut(s)	97, 139, 169, 199
BstSCI	CCNGG	2 cut(s)	82, 704
BstV1I	GCAGC	1 cut(s)	760
BstV2I	GAAGAC	1 cut(s)	526
BtgI	CCRYGG	1 cut(s)	283
BtgZI	GCGATG	1 cut(s)	967
BtsCI	GGATG	7 cut(s)	55, 289, 484, 667, 739, 843, 871
BtsIMutI	CAGTG	1 cut(s)	622
Cac8I	GCNNGC	2 cut(s)	595, 711
CciI	TCATGA	1 cut(s)	901
CfoI	GCGC	1 cut(s)	672
Cfr13I	GGNCC	1 cut(s)	808
Csp6I	GTAC	3 cut(s)	628, 643, 965
CviAII	CATG	7 cut(s)	284, 395, 416, 491, 602, 875, 902
CviJI	RGCY	8 cut(s)	93, 261, 312, 545, 701, 713, 734, 751
CviKI_1	RGCY	8 cut(s)	93, 261, 312, 545, 701, 713, 734, 751
CviQI	GTAC	3 cut(s)	628, 643, 965
DdeI	CTNAG	1 cut(s)	798
DpnI	GATC	4 cut(s)	99, 141, 171, 201
DpnII	GATC	4 cut(s)	97, 139, 169, 199
DriI	GACNNNNNGTC	1 cut(s)	424
Eam1104I	CTCTTC	1 cut(s)	280
Eam1105I	GACNNNNNGTC	1 cut(s)	424
EarI	CTCTTC	1 cut(s)	280
EciI	GGCGGA	1 cut(s)	282
Eco130I	CCWWGG	3 cut(s)	283, 307, 811
Eco47I	GGWCC	1 cut(s)	808
Eco47III	AGCGCT	1 cut(s)	671
Eco57I	CTGAAG	1 cut(s)	384
Eco72I	CACGTG	1 cut(s)	265
EcoRI	GAATTC	1 cut(s)	5
EcoT14I	CCWWGG	3 cut(s)	283, 307, 811
ErhI	CCWWGG	3 cut(s)	283, 307, 811
FaeI	CATG	7 cut(s)	287, 398, 419, 494, 605, 878, 905
FalI	AAGNNNNNCTT	2 cut(s)	300, 332
FaqI	GGGAC	2 cut(s)	253, 412
FatI	CATG	7 cut(s)	283, 394, 415, 490, 601, 874, 901
FauI	CCCGC	1 cut(s)	602
FbaI	TGATCA	1 cut(s)	97
Fnu4HI	GCNGC	1 cut(s)	749
FokI	GGATG	7 cut(s)	62, 276, 471, 674, 726, 850, 878
Fsp4HI	GCNGC	1 cut(s)	749
FspBI	CTAG	1 cut(s)	812
GlaI	GCGC	1 cut(s)	671
GluI	GCNGC	1 cut(s)	749
GsuI	CTGGAG	1 cut(s)	912
HaeII	RGCGCY	1 cut(s)	673
HapII	CCGG	2 cut(s)	84, 705
HhaI	GCGC	1 cut(s)	672
Hin1II	CATG	7 cut(s)	287, 398, 419, 494, 605, 878, 905
Hin6I	GCGC	1 cut(s)	670
HinP1I	GCGC	1 cut(s)	670
HincII	GTYRAC	1 cut(s)	694
HindII	GTYRAC	1 cut(s)	694
HinfI	GANTC	2 cut(s)	531, 782
HpaI	GTTAAC	1 cut(s)	694
HpaII	CCGG	2 cut(s)	84, 705
HphI	GGTGA	5 cut(s)	311, 404, 667, 827, 890
Hpy166II	GTNNAC	3 cut(s)	343, 412, 694
Hpy188I	TCNGA	4 cut(s)	45, 364, 530, 827
Hpy188III	TCNNGA	5 cut(s)	767, 776, 863, 891, 902
Hpy8I	GTNNAC	3 cut(s)	343, 412, 694
HpyAV	CCTTC	5 cut(s)	132, 162, 289, 490, 652
HpyCH4III	ACNGT	4 cut(s)	35, 388, 426, 832
HpyCH4IV	ACGT	1 cut(s)	264
HpyCH4V	TGCA	2 cut(s)	391, 748
HpyF3I	CTNAG	1 cut(s)	798
HpySE526I	ACGT	1 cut(s)	264
Hsp92II	CATG	7 cut(s)	287, 398, 419, 494, 605, 878, 905
HspAI	GCGC	1 cut(s)	670
Ksp22I	TGATCA	1 cut(s)	97
KspAI	GTTAAC	1 cut(s)	694
Kzo9I	GATC	4 cut(s)	97, 139, 169, 199
LmnI	GCTCC	4 cut(s)	230, 602, 667, 731
Lsp1109I	GCAGC	1 cut(s)	760
LweI	GCATC	2 cut(s)	400, 856
MaeI	CTAG	1 cut(s)	812
MaeII	ACGT	1 cut(s)	264
MaeIII	GTNAC	1 cut(s)	382
MalI	GATC	4 cut(s)	99, 141, 171, 201
MbiI	CCGCTC	1 cut(s)	597
MboI	GATC	4 cut(s)	97, 139, 169, 199
MboII	GAAGA	8 cut(s)	71, 149, 209, 267, 308, 377, 526, 970
MluCI	AATT	5 cut(s)	5, 70, 214, 437, 553
MlyI	GAGTC	2 cut(s)	540, 791
MseI	TTAA	3 cut(s)	693, 843, 858
MslI	CAYNNNNRTG	2 cut(s)	489, 653
MspA1I	CMGCKG	1 cut(s)	751
MspI	CCGG	2 cut(s)	84, 705
MspR9I	CCNGG	2 cut(s)	84, 706
Mva1269I	GAATGC	1 cut(s)	721
NciI	CCSGG	2 cut(s)	84, 706
NcoI	CCATGG	1 cut(s)	283
NdeII	GATC	4 cut(s)	97, 139, 169, 199
NlaIII	CATG	7 cut(s)	287, 398, 419, 494, 605, 878, 905
NlaIV	GGNNCC	2 cut(s)	23, 733
OliI	CACNNNNGTG	1 cut(s)	653
PagI	TCATGA	1 cut(s)	901
PctI	GAATGC	1 cut(s)	721
PkrI	GCNGC	1 cut(s)	750
PleI	GAGTC	2 cut(s)	539, 790
PmaCI	CACGTG	1 cut(s)	265
PmlI	CACGTG	1 cut(s)	265
PpsI	GAGTC	2 cut(s)	539, 790
Ppu21I	YACGTR	1 cut(s)	265
PsiI	TTATAA	1 cut(s)	762
PspCI	CACGTG	1 cut(s)	265
PspN4I	GGNNCC	2 cut(s)	23, 733
PspPI	GGNCC	1 cut(s)	808
PvuII	CAGCTG	1 cut(s)	751
RsaI	GTAC	3 cut(s)	629, 644, 966
RsaNI	GTAC	3 cut(s)	628, 643, 965
RseI	CAYNNNNRTG	2 cut(s)	489, 653
SaqAI	TTAA	3 cut(s)	693, 843, 858
SatI	GCNGC	1 cut(s)	749
Sau3AI	GATC	4 cut(s)	97, 139, 169, 199
Sau96I	GGNCC	1 cut(s)	808
SchI	GAGTC	2 cut(s)	540, 791
ScrFI	CCNGG	2 cut(s)	84, 706
SfaNI	GCATC	2 cut(s)	400, 856
SinI	GGWCC	1 cut(s)	808
SmiMI	CAYNNNNRTG	2 cut(s)	489, 653
SmlI	CTYRAG	1 cut(s)	716
SmoI	CTYRAG	1 cut(s)	716
Sse9I	AATT	5 cut(s)	5, 70, 214, 437, 553
SsiI	CCGC	4 cut(s)	293, 329, 595, 806
SspI	AATATT	1 cut(s)	850
SspMI	CTAG	1 cut(s)	812
StyD4I	CCNGG	2 cut(s)	82, 704
StyI	CCWWGG	3 cut(s)	283, 307, 811
TaaI	ACNGT	4 cut(s)	35, 388, 426, 832
TaiI	ACGT	1 cut(s)	267
TasI	AATT	5 cut(s)	5, 70, 214, 437, 553
TatI	WGTACW	1 cut(s)	642
Tru1I	TTAA	3 cut(s)	693, 843, 858
Tru9I	TTAA	3 cut(s)	693, 843, 858
TscAI	CASTG	1 cut(s)	629
TseI	GCWGC	1 cut(s)	748
TspDTI	ATGAA	7 cut(s)	30, 72, 114, 207, 618, 863, 890
TspRI	CASTG	1 cut(s)	629
VpaK11BI	GGWCC	1 cut(s)	808
XapI	RAATTY	2 cut(s)	5, 214
XmaJI	CCTAGG	1 cut(s)	811
XspI	CTAG	1 cut(s)	812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.