Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015158

Physical Location & Seq

Genomic Coordinates Forward (+)

1411229 .. 1417342

Gene Structure 6114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G010600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGTCGGGCATGGGAGATGGATATGTAGGCACAGCCCAAGATGCCGTGAGGATCCGAAGACTCGAAAAGCAAAGAGAAGCTGAGCGCCAAAAAATTCAAGAGCTCAAAACCAAGTCAGCCTCTGAAAAAGGCCAGCCAGGTCTCCTCCAATTTGGGTCAAGTACTTCTGAGATTCTTGAGACAGCATTTAAGAAGGAAACCGTTGGTTTGGTTACAAGGGAGCAATATGTTGAGAAGAGAGTAAATATTCGAAACAAAATTGAGGAGGAAGAGAAGGAGAAACTTCAGAAGCTTCAGCAAGAGGAGGAGGAATTTCAATTACAAAAGCGTAAGAAGAGGAAGATAAAGGGAAGTTCTCGATTGTCCTTTGCAGAAGACATGGAGGATGGAAGTGAAGAGGAAGATGGAGAAAATAAAAGCTCAGAGGCTACAAGAGTCTGGTGTGGTAGACTTGGGAAAGATCCTACAGTGGAAACTAGCTTTCTGCCAGATAGTGAGAGGGAGGCAGAGGAACAAGCTGAGCGTGAAAGGTTGCGGAAACAGTGGCTTGTTGAGCAGGATAAGATACGAAATGAACCACTTCAAATTACTTACAGCTATTGGGATGGAACAGGGCATAGAAAAGTGCTCCAGGTAAGAAAGGGTGATAAAATAGGAGATTTTCTTCGGGCTGTTCAACAACAACTTGCACCTGAGTTTCGAGAGGTGCGAACCACCTCAGTGGAGAATTTGTTATATGTAAAAGAAGATCTTATCATTCCACATCAGCATAGTTTCTATGAGCTAATTGTAAACAAGGCCAGGGGCAAAAGTGGACCACTTTTTCATTTTGATGTGCATGAGGATGTGCGAACAATTGCTGATGCTACGATAGAGAAGGATGAGTCTCATGCTGGGAAGGTTGTTGAGAGGCATTGGTATGAGAAGAATAAGCATATCTTCCCTGCTTCTAGATGGGAGATATATGATCCAACGAAGAAATGGGAGCGTTATACTATCCACGGGGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009639 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009892 GO:0009987 GO:0010033 GO:0010099 GO:0010114 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0019222 GO:0023052 GO:0031047 GO:0031050 GO:0032870 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035556 GO:0040029 GO:0042221 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071369 GO:0071407 GO:0071495 GO:0071704 GO:0090304 GO:1901360 GO:1901698 GO:1901699 GO:2000026 GO:2000030

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XAP5

Protein Analysis

337

Amino Acids

39.36

Weight (kDa)

6.23

Isoelectric Point (pI)

57.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21150
fragaria_vesca	FvH4_1g25110
malus_domestica	MD12G1008800.v1.1 MD14G1006100.v1.1
prunus_persica	Prupe.7G010600_v2.0.a1 Prupe.7G010600_v2.0.a1
pyrus_communis	pycom12g00660 pycom14g00480
rosa_chinensis	RchiOBHm_Chr2g0122771
rosa_multiflora	Rmu_sc0008259.1_g000003
rosa_roxburghii	Rroxscaffold_2G00121240
rosa_rugosa	Rorug02G0242300
rosa_samantha	Rh2AG300500 Rh2CG287200
rosa_wichuraiana	Rw2G023870 Rw2G024110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	448
AciI	CCGC	1 cut(s)	535
AclWI	GGATC	4 cut(s)	46, 59, 455, 962
AcsI	RAATTY	3 cut(s)	93, 311, 727
AcuI	CTGAAG	2 cut(s)	269, 278
AfaI	GTAC	1 cut(s)	163
AgsI	TTSAA	4 cut(s)	98, 317, 584, 677
AjnI	CCWGG	3 cut(s)	136, 630, 800
AleI	CACNNNNGTG	1 cut(s)	719
AluBI	AGCT	8 cut(s)	80, 103, 292, 420, 480, 518, 597, 784
AluI	AGCT	8 cut(s)	80, 103, 292, 420, 480, 518, 597, 784
Alw21I	GWGCWC	2 cut(s)	105, 630
Alw26I	GTCTC	3 cut(s)	146, 173, 891
AlwI	GGATC	4 cut(s)	46, 59, 455, 962
AlwNI	CAGNNNCTG	1 cut(s)	122
AoxI	GGCC	2 cut(s)	130, 798
ApoI	RAATTY	3 cut(s)	93, 311, 727
Asp700I	GAANNNNTTC	1 cut(s)	579
AspLEI	GCGC	1 cut(s)	87
AspS9I	GGNCC	1 cut(s)	815
AsuHPI	GGTGA	1 cut(s)	656
AsuII	TTCGAA	1 cut(s)	250
AvaII	GGWCC	1 cut(s)	815
BamHI	GGATCC	1 cut(s)	51
BanII	GRGCYC	1 cut(s)	105
BbsI	GAAGAC	2 cut(s)	64, 381
Bbv12I	GWGCWC	2 cut(s)	105, 630
BccI	CCATC	5 cut(s)	11, 380, 398, 599, 948
BceAI	ACGGC	1 cut(s)	29
BciT130I	CCWGG	3 cut(s)	138, 632, 802
BcoDI	GTCTC	3 cut(s)	146, 173, 891
BfaI	CTAG	2 cut(s)	477, 951
BfmI	CTRYAG	1 cut(s)	465
BfoI	RGCGCY	1 cut(s)	88
BglII	AGATCT	1 cut(s)	748
BlpI	GCTNAGC	2 cut(s)	81, 519
BmcAI	AGTACT	1 cut(s)	163
Bme1390I	CCNGG	3 cut(s)	138, 632, 802
Bme18I	GGWCC	1 cut(s)	815
BmgT120I	GGNCC	1 cut(s)	815
BmiI	GGNNCC	1 cut(s)	53
BmrFI	CCNGG	3 cut(s)	138, 632, 802
BmsI	GCATC	2 cut(s)	31, 853
BpiI	GAAGAC	2 cut(s)	64, 381
BpmI	CTGGAG	1 cut(s)	614
Bpu1102I	GCTNAGC	2 cut(s)	81, 519
Bpu14I	TTCGAA	1 cut(s)	250
BpuEI	CTTGAG	1 cut(s)	197
BsaI	GGTCTC	1 cut(s)	146
BsaJI	CCNNGG	2 cut(s)	801, 1000
BsaXI	ACNNNNNCTCC	2 cut(s)	716, 746
BseBI	CCWGG	3 cut(s)	138, 632, 802
BseDI	CCNNGG	2 cut(s)	801, 1000
BseGI	GGATG	4 cut(s)	391, 610, 850, 886
BseMII	CTCAG	6 cut(s)	72, 159, 435, 510, 684, 732
BseRI	GAGGAG	4 cut(s)	134, 278, 317, 320
BseYI	CCCAGC	1 cut(s)	893
BshFI	GGCC	2 cut(s)	132, 800
BsiHKAI	GWGCWC	2 cut(s)	105, 630
BsmAI	GTCTC	3 cut(s)	146, 173, 891
BsnI	GGCC	2 cut(s)	132, 800
Bso31I	GGTCTC	1 cut(s)	146
Bsp119I	TTCGAA	1 cut(s)	250
Bsp1286I	GDGCHC	2 cut(s)	105, 630
Bsp143I	GATC	4 cut(s)	51, 460, 748, 967
Bsp1720I	GCTNAGC	2 cut(s)	81, 519
BspACI	CCGC	1 cut(s)	535
BspANI	GGCC	2 cut(s)	132, 800
BspCNI	CTCAG	6 cut(s)	73, 160, 434, 511, 685, 731
BspLI	GGNNCC	1 cut(s)	53
BspPI	GGATC	4 cut(s)	46, 59, 455, 962
BspT104I	TTCGAA	1 cut(s)	250
BspTNI	GGTCTC	1 cut(s)	146
BssECI	CCNNGG	2 cut(s)	801, 1000
BssMI	GATC	4 cut(s)	51, 460, 748, 967
Bst2UI	CCWGG	3 cut(s)	138, 632, 802
Bst4CI	ACNGT	3 cut(s)	202, 469, 543
Bst6I	CTCTTC	4 cut(s)	230, 264, 329, 390
BstBI	TTCGAA	1 cut(s)	250
BstC8I	GCNNGC	1 cut(s)	134
BstDEI	CTNAG	6 cut(s)	81, 168, 421, 519, 693, 718
BstDSI	CCRYGG	1 cut(s)	1000
BstF5I	GGATG	4 cut(s)	391, 610, 850, 886
BstH2I	RGCGCY	1 cut(s)	88
BstHHI	GCGC	1 cut(s)	87
BstKTI	GATC	4 cut(s)	54, 463, 751, 970
BstMAI	GTCTC	3 cut(s)	146, 173, 891
BstMBI	GATC	4 cut(s)	51, 460, 748, 967
BstMWI	GCNNNNNNNGC	2 cut(s)	41, 553
BstNI	CCWGG	3 cut(s)	138, 632, 802
BstSCI	CCNGG	3 cut(s)	136, 630, 800
BstSFI	CTRYAG	1 cut(s)	465
BstV2I	GAAGAC	2 cut(s)	64, 381
BstX2I	RGATCY	3 cut(s)	51, 460, 748
BstXI	CCANNNNNNTGG	1 cut(s)	721
BstYI	RGATCY	3 cut(s)	51, 460, 748
BsuRI	GGCC	2 cut(s)	132, 800
BtgI	CCRYGG	1 cut(s)	1000
BtsCI	GGATG	4 cut(s)	391, 610, 850, 886
BtsIMutI	CAGTG	3 cut(s)	474, 548, 726
Cac8I	GCNNGC	1 cut(s)	134
CaiI	CAGNNNCTG	1 cut(s)	122
CfoI	GCGC	1 cut(s)	87
Cfr13I	GGNCC	1 cut(s)	815
Csp6I	GTAC	1 cut(s)	162
CviAII	CATG	4 cut(s)	10, 379, 839, 890
CviQI	GTAC	1 cut(s)	162
DdeI	CTNAG	6 cut(s)	81, 168, 421, 519, 693, 718
DpnI	GATC	4 cut(s)	53, 462, 750, 969
DpnII	GATC	4 cut(s)	51, 460, 748, 967
Eam1104I	CTCTTC	4 cut(s)	230, 264, 329, 390
EarI	CTCTTC	4 cut(s)	230, 264, 329, 390
Ecl136II	GAGCTC	1 cut(s)	103
Eco24I	GRGCYC	1 cut(s)	105
Eco31I	GGTCTC	1 cut(s)	146
Eco47I	GGWCC	1 cut(s)	815
Eco53kI	GAGCTC	1 cut(s)	103
Eco57I	CTGAAG	2 cut(s)	269, 278
EcoICRI	GAGCTC	1 cut(s)	103
EcoRII	CCWGG	3 cut(s)	136, 630, 800
EcoT38I	GRGCYC	1 cut(s)	105
FaeI	CATG	4 cut(s)	13, 382, 842, 893
FalI	AAGNNNNNCTT	4 cut(s)	735, 767, 923, 955
FatI	CATG	4 cut(s)	9, 378, 838, 889
FblI	GTMKAC	1 cut(s)	448
FokI	GGATG	4 cut(s)	398, 617, 857, 893
FriOI	GRGCYC	1 cut(s)	105
FspBI	CTAG	2 cut(s)	477, 951
GlaI	GCGC	1 cut(s)	86
GsaI	CCCAGC	1 cut(s)	897
GsuI	CTGGAG	1 cut(s)	614
HaeII	RGCGCY	1 cut(s)	88
HaeIII	GGCC	2 cut(s)	132, 800
HhaI	GCGC	1 cut(s)	87
Hin1II	CATG	4 cut(s)	13, 382, 842, 893
Hin6I	GCGC	1 cut(s)	85
HinP1I	GCGC	1 cut(s)	85
HindIII	AAGCTT	1 cut(s)	290
HinfI	GANTC	4 cut(s)	60, 172, 435, 884
HphI	GGTGA	1 cut(s)	656
Hpy166II	GTNNAC	3 cut(s)	449, 793, 815
Hpy188I	TCNGA	5 cut(s)	56, 124, 169, 288, 424
Hpy188III	TCNNGA	5 cut(s)	98, 176, 357, 701, 951
Hpy8I	GTNNAC	3 cut(s)	449, 793, 815
HpyAV	CCTTC	4 cut(s)	187, 268, 871, 892
HpyCH4III	ACNGT	3 cut(s)	202, 469, 543
HpyCH4V	TGCA	3 cut(s)	371, 689, 838
HpyF10VI	GCNNNNNNNGC	2 cut(s)	41, 553
HpyF3I	CTNAG	6 cut(s)	81, 168, 421, 519, 693, 718
Hsp92II	CATG	4 cut(s)	13, 382, 842, 893
HspAI	GCGC	1 cut(s)	85
Kzo9I	GATC	4 cut(s)	51, 460, 748, 967
LmnI	GCTCC	3 cut(s)	220, 633, 985
LweI	GCATC	2 cut(s)	31, 853
MaeI	CTAG	2 cut(s)	477, 951
MaeIII	GTNAC	1 cut(s)	211
MalI	GATC	4 cut(s)	53, 462, 750, 969
MboI	GATC	4 cut(s)	51, 460, 748, 967
MfeI	CAATTG	1 cut(s)	855
MflI	RGATCY	3 cut(s)	51, 460, 748
MhlI	GDGCHC	2 cut(s)	105, 630
MluCI	AATT	9 cut(s)	93, 149, 258, 311, 317, 585, 727, 786, 855
MlyI	GAGTC	3 cut(s)	54, 444, 893
MmeI	TCCRAC	1 cut(s)	995
MroXI	GAANNNNTTC	1 cut(s)	579
MseI	TTAA	1 cut(s)	189
MslI	CAYNNNNRTG	4 cut(s)	719, 831, 843, 918
MspR9I	CCNGG	3 cut(s)	138, 632, 802
MunI	CAATTG	1 cut(s)	855
MvaI	CCWGG	3 cut(s)	138, 632, 802
MwoI	GCNNNNNNNGC	2 cut(s)	41, 553
NdeII	GATC	4 cut(s)	51, 460, 748, 967
NlaIII	CATG	4 cut(s)	13, 382, 842, 893
NlaIV	GGNNCC	1 cut(s)	53
NspV	TTCGAA	1 cut(s)	250
OliI	CACNNNNGTG	1 cut(s)	719
PcsI	WCGNNNNNNNCGW	1 cut(s)	706
PdmI	GAANNNNTTC	1 cut(s)	579
PfeI	GAWTC	1 cut(s)	172
PleI	GAGTC	3 cut(s)	54, 443, 892
PpsI	GAGTC	3 cut(s)	54, 443, 892
Psp124BI	GAGCTC	1 cut(s)	105
Psp6I	CCWGG	3 cut(s)	136, 630, 800
PspFI	CCCAGC	1 cut(s)	893
PspGI	CCWGG	3 cut(s)	136, 630, 800
PspN4I	GGNNCC	1 cut(s)	53
PspPI	GGNCC	1 cut(s)	815
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	3 cut(s)	51, 460, 748
RsaI	GTAC	1 cut(s)	163
RsaNI	GTAC	1 cut(s)	162
RseI	CAYNNNNRTG	4 cut(s)	719, 831, 843, 918
SacI	GAGCTC	1 cut(s)	105
SaqAI	TTAA	1 cut(s)	189
Sau3AI	GATC	4 cut(s)	51, 460, 748, 967
Sau96I	GGNCC	1 cut(s)	815
ScaI	AGTACT	1 cut(s)	163
SchI	GAGTC	3 cut(s)	54, 444, 893
ScrFI	CCNGG	3 cut(s)	138, 632, 802
SduI	GDGCHC	2 cut(s)	105, 630
SfaNI	GCATC	2 cut(s)	31, 853
SfcI	CTRYAG	1 cut(s)	465
SfuI	TTCGAA	1 cut(s)	250
SinI	GGWCC	1 cut(s)	815
SmiMI	CAYNNNNRTG	4 cut(s)	719, 831, 843, 918
SmlI	CTYRAG	1 cut(s)	176
SmoI	CTYRAG	1 cut(s)	176
Sse9I	AATT	9 cut(s)	93, 149, 258, 311, 317, 585, 727, 786, 855
SsiI	CCGC	1 cut(s)	535
SspI	AATATT	1 cut(s)	247
SspMI	CTAG	2 cut(s)	477, 951
SstI	GAGCTC	1 cut(s)	105
StyD4I	CCNGG	3 cut(s)	136, 630, 800
TaaI	ACNGT	3 cut(s)	202, 469, 543
TaqI	TCGA	4 cut(s)	63, 250, 358, 700
TasI	AATT	9 cut(s)	93, 149, 258, 311, 317, 585, 727, 786, 855
TatI	WGTACW	1 cut(s)	161
TfiI	GAWTC	1 cut(s)	172
Tru1I	TTAA	1 cut(s)	189
Tru9I	TTAA	1 cut(s)	189
TscAI	CASTG	3 cut(s)	474, 548, 726
TspDTI	ATGAA	2 cut(s)	588, 815
TspRI	CASTG	3 cut(s)	474, 548, 726
VpaK11BI	GGWCC	1 cut(s)	815
XapI	RAATTY	3 cut(s)	93, 311, 727
XbaI	TCTAGA	1 cut(s)	950
XcmI	CCANNNNNNNNNTGG	1 cut(s)	978
XmiI	GTMKAC	1 cut(s)	448
XmnI	GAANNNNTTC	1 cut(s)	579
XspI	CTAG	2 cut(s)	477, 951
ZrmI	AGTACT	1 cut(s)	163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.