Protein XAP5 CIRCADIAN
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ARM_7 | PF26524 | 6 - 244 | 1.8e-115 | Plant ARM repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 997 |
| AciI | CCGC | 2 cut(s) | 1007, 1857 |
| AclWI | GGATC | 3 cut(s) | 1197, 1308, 1541 |
| AcoI | YGGCCR | 1 cut(s) | 1690 |
| AcsI | RAATTY | 5 cut(s) | 338, 495, 737, 1144, 1237 |
| AcuI | CTGAAG | 5 cut(s) | 113, 266, 663, 1049, 1827 |
| AcvI | CACGTG | 1 cut(s) | 1406 |
| AfaI | GTAC | 3 cut(s) | 563, 958, 987 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 32, 149 |
| AflIII | ACRYGT | 2 cut(s) | 959, 1403 |
| AgsI | TTSAA | 9 cut(s) | 386, 416, 515, 623, 947, 1133, 1144, 1162, 1232 |
| AjnI | CCWGG | 3 cut(s) | 31, 754, 859 |
| Alw21I | GWGCWC | 5 cut(s) | 530, 1354, 1411, 1465, 1535 |
| Alw26I | GTCTC | 4 cut(s) | 99, 678, 1454, 1712 |
| Alw44I | GTGCAC | 1 cut(s) | 1407 |
| AlwI | GGATC | 3 cut(s) | 1197, 1308, 1541 |
| AoxI | GGCC | 3 cut(s) | 151, 442, 1690 |
| ApaLI | GTGCAC | 1 cut(s) | 1407 |
| ApeKI | GCWGC | 7 cut(s) | 299, 1208, 1211, 1271, 1385, 1619, 1640 |
| ApoI | RAATTY | 5 cut(s) | 338, 495, 737, 1144, 1237 |
| AspS9I | GGNCC | 1 cut(s) | 842 |
| AsuHPI | GGTGA | 4 cut(s) | 503, 780, 1037, 1691 |
| AsuNHI | GCTAGC | 1 cut(s) | 851 |
| AvaII | GGWCC | 1 cut(s) | 842 |
| BaeGI | GKGCMC | 1 cut(s) | 1411 |
| BanII | GRGCYC | 3 cut(s) | 530, 1354, 1465 |
| BauI | CACGAG | 1 cut(s) | 603 |
| BbrPI | CACGTG | 1 cut(s) | 1406 |
| BbsI | GAAGAC | 1 cut(s) | 923 |
| Bbv12I | GWGCWC | 5 cut(s) | 530, 1354, 1411, 1465, 1535 |
| BbvI | GCAGC | 7 cut(s) | 311, 1220, 1223, 1258, 1372, 1631, 1652 |
| BccI | CCATC | 1 cut(s) | 122 |
| BciT130I | CCWGG | 3 cut(s) | 33, 756, 861 |
| BciVI | GTATCC | 2 cut(s) | 98, 1085 |
| BcoDI | GTCTC | 4 cut(s) | 99, 678, 1454, 1712 |
| BfaI | CTAG | 3 cut(s) | 518, 852, 954 |
| BfmI | CTRYAG | 2 cut(s) | 477, 846 |
| BfuAI | ACCTGC | 1 cut(s) | 997 |
| BfuI | GTATCC | 2 cut(s) | 98, 1085 |
| BisI | GCNGC | 7 cut(s) | 300, 1209, 1212, 1272, 1386, 1620, 1641 |
| BlsI | GCNGC | 7 cut(s) | 301, 1210, 1213, 1273, 1387, 1621, 1642 |
| Bme1390I | CCNGG | 3 cut(s) | 33, 756, 861 |
| Bme18I | GGWCC | 1 cut(s) | 842 |
| BmgT120I | GGNCC | 1 cut(s) | 842 |
| BmiI | GGNNCC | 1 cut(s) | 1578 |
| BmrFI | CCNGG | 3 cut(s) | 33, 756, 861 |
| BmsI | GCATC | 7 cut(s) | 20, 26, 1283, 1387, 1498, 1602, 1747 |
| BmtI | GCTAGC | 1 cut(s) | 855 |
| BpiI | GAAGAC | 1 cut(s) | 923 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1447, 1479 |
| BpmI | CTGGAG | 3 cut(s) | 662, 1287, 1474 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1381, 1464 |
| BpuEI | CTTGAG | 2 cut(s) | 521, 554 |
| BsaAI | YACGTR | 1 cut(s) | 1406 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1551 |
| BsaI | GGTCTC | 2 cut(s) | 99, 678 |
| BsaJI | CCNNGG | 2 cut(s) | 31, 168 |
| BsaWI | WCCGGW | 1 cut(s) | 706 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 32, 149 |
| Bse1I | ACTGG | 3 cut(s) | 559, 1078, 1096 |
| Bse3DI | GCAATG | 3 cut(s) | 671, 1767, 1774 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1551 |
| BseBI | CCWGG | 3 cut(s) | 33, 756, 861 |
| BseDI | CCNNGG | 2 cut(s) | 31, 168 |
| BseGI | GGATG | 5 cut(s) | 41, 127, 175, 1762, 1792 |
| BseJI | GATNNNNATC | 1 cut(s) | 1551 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 32, 149 |
| BseMI | GCAATG | 3 cut(s) | 671, 1767, 1774 |
| BseMII | CTCAG | 5 cut(s) | 180, 1299, 1367, 1478, 1550 |
| BseNI | ACTGG | 3 cut(s) | 559, 1078, 1096 |
| BseSI | GKGCMC | 1 cut(s) | 1411 |
| BseXI | GCAGC | 7 cut(s) | 311, 1220, 1223, 1258, 1372, 1631, 1652 |
| BseYI | CCCAGC | 1 cut(s) | 832 |
| BsgI | GTGCAG | 3 cut(s) | 975, 1403, 1638 |
| Bsh1285I | CGRYCG | 1 cut(s) | 896 |
| BshFI | GGCC | 3 cut(s) | 153, 444, 1692 |
| BsiEI | CGRYCG | 1 cut(s) | 896 |
| BsiHKAI | GWGCWC | 5 cut(s) | 530, 1354, 1411, 1465, 1535 |
| BsiSI | CCGG | 1 cut(s) | 707 |
| BslFI | GGGAC | 1 cut(s) | 1102 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 32, 149 |
| BsmAI | GTCTC | 4 cut(s) | 99, 678, 1454, 1712 |
| BsmFI | GGGAC | 1 cut(s) | 1102 |
| BsnI | GGCC | 3 cut(s) | 153, 444, 1692 |
| Bso31I | GGTCTC | 2 cut(s) | 99, 678 |
| Bsp1286I | GDGCHC | 5 cut(s) | 530, 1354, 1411, 1465, 1535 |
| Bsp143I | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| Bsp19I | CCATGG | 1 cut(s) | 168 |
| BspACI | CCGC | 2 cut(s) | 1007, 1857 |
| BspANI | GGCC | 3 cut(s) | 153, 444, 1692 |
| BspCNI | CTCAG | 5 cut(s) | 181, 1298, 1366, 1477, 1549 |
| BspHI | TCATGA | 1 cut(s) | 268 |
| BspLI | GGNNCC | 1 cut(s) | 1578 |
| BspMI | ACCTGC | 1 cut(s) | 997 |
| BspOI | GCTAGC | 1 cut(s) | 855 |
| BspPI | GGATC | 3 cut(s) | 1197, 1308, 1541 |
| BspQI | GCTCTTC | 2 cut(s) | 73, 1453 |
| BspTNI | GGTCTC | 2 cut(s) | 99, 678 |
| BsrDI | GCAATG | 3 cut(s) | 671, 1767, 1774 |
| BsrI | ACTGG | 3 cut(s) | 559, 1078, 1096 |
| BssECI | CCNNGG | 2 cut(s) | 31, 168 |
| BssMI | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| BssSI | CACGAG | 1 cut(s) | 603 |
| BssT1I | CCWWGG | 1 cut(s) | 168 |
| Bst2BI | CACGAG | 1 cut(s) | 603 |
| Bst2UI | CCWGG | 3 cut(s) | 33, 756, 861 |
| Bst4CI | ACNGT | 4 cut(s) | 590, 692, 1140, 1343 |
| Bst6I | CTCTTC | 2 cut(s) | 73, 1453 |
| BstBAI | YACGTR | 1 cut(s) | 1406 |
| BstC8I | GCNNGC | 6 cut(s) | 260, 463, 731, 853, 1617, 1855 |
| BstDEI | CTNAG | 6 cut(s) | 189, 1285, 1353, 1381, 1464, 1536 |
| BstDSI | CCRYGG | 1 cut(s) | 168 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 30 |
| BstF5I | GGATG | 5 cut(s) | 41, 127, 175, 1762, 1792 |
| BstKTI | GATC | 5 cut(s) | 595, 1192, 1316, 1549, 1555 |
| BstMAI | GTCTC | 4 cut(s) | 99, 678, 1454, 1712 |
| BstMBI | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| BstMCI | CGRYCG | 1 cut(s) | 896 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 434, 458, 989, 1406 |
| BstNI | CCWGG | 3 cut(s) | 33, 756, 861 |
| BstNSI | RCATGY | 3 cut(s) | 763, 963, 1480 |
| BstSCI | CCNGG | 3 cut(s) | 31, 754, 859 |
| BstSFI | CTRYAG | 2 cut(s) | 477, 846 |
| BstSLI | GKGCMC | 1 cut(s) | 1411 |
| BstV1I | GCAGC | 7 cut(s) | 311, 1220, 1223, 1258, 1372, 1631, 1652 |
| BstV2I | GAAGAC | 1 cut(s) | 923 |
| BstX2I | RGATCY | 2 cut(s) | 1189, 1313 |
| BstYI | RGATCY | 2 cut(s) | 1189, 1313 |
| BsuI | GTATCC | 2 cut(s) | 98, 1085 |
| BsuRI | GGCC | 3 cut(s) | 153, 444, 1692 |
| BtgI | CCRYGG | 1 cut(s) | 168 |
| BtsCI | GGATG | 5 cut(s) | 41, 127, 175, 1762, 1792 |
| BtsI | GCAGTG | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 5 cut(s) | 154, 162, 227, 586, 1361 |
| BveI | ACCTGC | 1 cut(s) | 997 |
| Cac8I | GCNNGC | 6 cut(s) | 260, 463, 731, 853, 1617, 1855 |
| CciI | TCATGA | 1 cut(s) | 268 |
| Cfr13I | GGNCC | 1 cut(s) | 842 |
| Csp6I | GTAC | 3 cut(s) | 562, 957, 986 |
| CviQI | GTAC | 3 cut(s) | 562, 957, 986 |
| DdeI | CTNAG | 6 cut(s) | 189, 1285, 1353, 1381, 1464, 1536 |
| DpnI | GATC | 5 cut(s) | 594, 1191, 1315, 1548, 1554 |
| DpnII | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| DraI | TTTAAA | 1 cut(s) | 703 |
| EaeI | YGGCCR | 1 cut(s) | 1690 |
| Eam1104I | CTCTTC | 2 cut(s) | 73, 1453 |
| EarI | CTCTTC | 2 cut(s) | 73, 1453 |
| Ecl136II | GAGCTC | 3 cut(s) | 528, 1352, 1463 |
| Eco130I | CCWWGG | 1 cut(s) | 168 |
| Eco24I | GRGCYC | 3 cut(s) | 530, 1354, 1465 |
| Eco31I | GGTCTC | 2 cut(s) | 99, 678 |
| Eco47I | GGWCC | 1 cut(s) | 842 |
| Eco53kI | GAGCTC | 3 cut(s) | 528, 1352, 1463 |
| Eco57I | CTGAAG | 5 cut(s) | 113, 266, 663, 1049, 1827 |
| Eco72I | CACGTG | 1 cut(s) | 1406 |
| EcoICRI | GAGCTC | 3 cut(s) | 528, 1352, 1463 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 30 |
| EcoO109I | RGGNCCY | 1 cut(s) | 842 |
| EcoRI | GAATTC | 2 cut(s) | 737, 1144 |
| EcoRII | CCWGG | 3 cut(s) | 31, 754, 859 |
| EcoT14I | CCWWGG | 1 cut(s) | 168 |
| EcoT38I | GRGCYC | 3 cut(s) | 530, 1354, 1465 |
| ErhI | CCWWGG | 1 cut(s) | 168 |
| FaqI | GGGAC | 1 cut(s) | 1102 |
| Fnu4HI | GCNGC | 7 cut(s) | 300, 1209, 1212, 1272, 1386, 1620, 1641 |
| FokI | GGATG | 5 cut(s) | 48, 134, 162, 1769, 1799 |
| FriOI | GRGCYC | 3 cut(s) | 530, 1354, 1465 |
| Fsp4HI | GCNGC | 7 cut(s) | 300, 1209, 1212, 1272, 1386, 1620, 1641 |
| FspBI | CTAG | 3 cut(s) | 518, 852, 954 |
| GluI | GCNGC | 7 cut(s) | 300, 1209, 1212, 1272, 1386, 1620, 1641 |
| GsaI | CCCAGC | 1 cut(s) | 836 |
| GsuI | CTGGAG | 3 cut(s) | 662, 1287, 1474 |
| HaeIII | GGCC | 3 cut(s) | 153, 444, 1692 |
| HapII | CCGG | 1 cut(s) | 707 |
| HincII | GTYRAC | 3 cut(s) | 405, 568, 1000 |
| HindII | GTYRAC | 3 cut(s) | 405, 568, 1000 |
| HindIII | AAGCTT | 2 cut(s) | 1226, 1851 |
| HinfI | GANTC | 5 cut(s) | 64, 250, 629, 1046, 1706 |
| HpaI | GTTAAC | 1 cut(s) | 405 |
| HpaII | CCGG | 1 cut(s) | 707 |
| HphI | GGTGA | 4 cut(s) | 503, 780, 1037, 1691 |
| Hpy166II | GTNNAC | 4 cut(s) | 405, 568, 1000, 1409 |
| Hpy188I | TCNGA | 7 cut(s) | 19, 246, 434, 901, 1043, 1288, 1711 |
| Hpy8I | GTNNAC | 4 cut(s) | 405, 568, 1000, 1409 |
| Hpy99I | CGWCG | 1 cut(s) | 258 |
| HpyAV | CCTTC | 8 cut(s) | 49, 53, 119, 232, 393, 567, 1226, 1746 |
| HpyCH4III | ACNGT | 4 cut(s) | 590, 692, 1140, 1343 |
| HpyCH4IV | ACGT | 4 cut(s) | 407, 564, 1096, 1405 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 434, 458, 989, 1406 |
| HpyF3I | CTNAG | 6 cut(s) | 189, 1285, 1353, 1381, 1464, 1536 |
| HpySE526I | ACGT | 4 cut(s) | 407, 564, 1096, 1405 |
| KspAI | GTTAAC | 1 cut(s) | 405 |
| Kzo9I | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| LguI | GCTCTTC | 2 cut(s) | 73, 1453 |
| LmnI | GCTCC | 2 cut(s) | 379, 1268 |
| Lsp1109I | GCAGC | 7 cut(s) | 311, 1220, 1223, 1258, 1372, 1631, 1652 |
| LweI | GCATC | 7 cut(s) | 20, 26, 1283, 1387, 1498, 1602, 1747 |
| MaeI | CTAG | 3 cut(s) | 518, 852, 954 |
| MaeII | ACGT | 4 cut(s) | 407, 564, 1096, 1405 |
| MaeIII | GTNAC | 5 cut(s) | 939, 1080, 1097, 1109, 1679 |
| MalI | GATC | 5 cut(s) | 594, 1191, 1315, 1548, 1554 |
| MboI | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| MflI | RGATCY | 2 cut(s) | 1189, 1313 |
| MhlI | GDGCHC | 5 cut(s) | 530, 1354, 1411, 1465, 1535 |
| MluCI | AATT | 7 cut(s) | 309, 338, 495, 737, 816, 1144, 1237 |
| MlyI | GAGTC | 1 cut(s) | 638 |
| MmeI | TCCRAC | 1 cut(s) | 743 |
| MseI | TTAA | 9 cut(s) | 404, 578, 687, 702, 743, 809, 1200, 1602, 1848 |
| MslI | CAYNNNNRTG | 4 cut(s) | 167, 180, 232, 1656 |
| MspA1I | CMGCKG | 1 cut(s) | 794 |
| MspI | CCGG | 1 cut(s) | 707 |
| MspR9I | CCNGG | 3 cut(s) | 33, 756, 861 |
| MvaI | CCWGG | 3 cut(s) | 33, 756, 861 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 434, 458, 989, 1406 |
| NcoI | CCATGG | 1 cut(s) | 168 |
| NdeII | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| NheI | GCTAGC | 1 cut(s) | 851 |
| NlaIV | GGNNCC | 1 cut(s) | 1578 |
| NmeAIII | GCCGAG | 1 cut(s) | 1718 |
| NmuCI | GTSAC | 2 cut(s) | 1080, 1679 |
| NspI | RCATGY | 3 cut(s) | 763, 963, 1480 |
| PagI | TCATGA | 1 cut(s) | 268 |
| PciI | ACATGT | 1 cut(s) | 959 |
| PciSI | GCTCTTC | 2 cut(s) | 73, 1453 |
| PfeI | GAWTC | 4 cut(s) | 64, 250, 1046, 1706 |
| PkrI | GCNGC | 7 cut(s) | 301, 1210, 1213, 1273, 1387, 1621, 1642 |
| PleI | GAGTC | 1 cut(s) | 637 |
| PmaCI | CACGTG | 1 cut(s) | 1406 |
| PmlI | CACGTG | 1 cut(s) | 1406 |
| PpsI | GAGTC | 1 cut(s) | 637 |
| Ppu21I | YACGTR | 1 cut(s) | 1406 |
| PpuMI | RGGWCCY | 1 cut(s) | 842 |
| PscI | ACATGT | 1 cut(s) | 959 |
| Psp124BI | GAGCTC | 3 cut(s) | 530, 1354, 1465 |
| Psp5II | RGGWCCY | 1 cut(s) | 842 |
| Psp6I | CCWGG | 3 cut(s) | 31, 754, 859 |
| PspCI | CACGTG | 1 cut(s) | 1406 |
| PspFI | CCCAGC | 1 cut(s) | 832 |
| PspGI | CCWGG | 3 cut(s) | 31, 754, 859 |
| PspN4I | GGNNCC | 1 cut(s) | 1578 |
| PspPI | GGNCC | 1 cut(s) | 842 |
| PspPPI | RGGWCCY | 1 cut(s) | 842 |
| PsuI | RGATCY | 2 cut(s) | 1189, 1313 |
| PvuII | CAGCTG | 1 cut(s) | 794 |
| RsaI | GTAC | 3 cut(s) | 563, 958, 987 |
| RsaNI | GTAC | 3 cut(s) | 562, 957, 986 |
| RseI | CAYNNNNRTG | 4 cut(s) | 167, 180, 232, 1656 |
| SacI | GAGCTC | 3 cut(s) | 530, 1354, 1465 |
| SapI | GCTCTTC | 2 cut(s) | 73, 1453 |
| SaqAI | TTAA | 9 cut(s) | 404, 578, 687, 702, 743, 809, 1200, 1602, 1848 |
| SatI | GCNGC | 7 cut(s) | 300, 1209, 1212, 1272, 1386, 1620, 1641 |
| Sau3AI | GATC | 5 cut(s) | 592, 1189, 1313, 1546, 1552 |
| Sau96I | GGNCC | 1 cut(s) | 842 |
| SchI | GAGTC | 1 cut(s) | 638 |
| ScrFI | CCNGG | 3 cut(s) | 33, 756, 861 |
| SduI | GDGCHC | 5 cut(s) | 530, 1354, 1411, 1465, 1535 |
| SfaNI | GCATC | 7 cut(s) | 20, 26, 1283, 1387, 1498, 1602, 1747 |
| SfcI | CTRYAG | 2 cut(s) | 477, 846 |
| SinI | GGWCC | 1 cut(s) | 842 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 167, 180, 232, 1656 |
| SmlI | CTYRAG | 2 cut(s) | 500, 533 |
| SmoI | CTYRAG | 2 cut(s) | 500, 533 |
| Sse9I | AATT | 7 cut(s) | 309, 338, 495, 737, 816, 1144, 1237 |
| SsiI | CCGC | 2 cut(s) | 1007, 1857 |
| SspI | AATATT | 1 cut(s) | 886 |
| SspMI | CTAG | 3 cut(s) | 518, 852, 954 |
| SstI | GAGCTC | 3 cut(s) | 530, 1354, 1465 |
| StyD4I | CCNGG | 3 cut(s) | 31, 754, 859 |
| StyI | CCWWGG | 1 cut(s) | 168 |
| TaaI | ACNGT | 4 cut(s) | 590, 692, 1140, 1343 |
| TaiI | ACGT | 4 cut(s) | 410, 567, 1099, 1408 |
| TaqI | TCGA | 3 cut(s) | 213, 870, 1348 |
| TaqII | GACCGA | 2 cut(s) | 585, 882 |
| TasI | AATT | 7 cut(s) | 309, 338, 495, 737, 816, 1144, 1237 |
| TatI | WGTACW | 1 cut(s) | 956 |
| TfiI | GAWTC | 4 cut(s) | 64, 250, 1046, 1706 |
| Tru1I | TTAA | 9 cut(s) | 404, 578, 687, 702, 743, 809, 1200, 1602, 1848 |
| Tru9I | TTAA | 9 cut(s) | 404, 578, 687, 702, 743, 809, 1200, 1602, 1848 |
| TscAI | CASTG | 5 cut(s) | 154, 169, 234, 593, 1361 |
| TseFI | GTSAC | 2 cut(s) | 1080, 1679 |
| TseI | GCWGC | 7 cut(s) | 299, 1208, 1211, 1271, 1385, 1619, 1640 |
| Tsp45I | GTSAC | 2 cut(s) | 1080, 1679 |
| TspDTI | ATGAA | 7 cut(s) | 68, 184, 306, 341, 347, 795, 1510 |
| TspGWI | ACGGA | 1 cut(s) | 1764 |
| TspRI | CASTG | 5 cut(s) | 154, 169, 234, 593, 1361 |
| VneI | GTGCAC | 1 cut(s) | 1407 |
| VpaK11BI | GGWCC | 1 cut(s) | 842 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 30 |
| XapI | RAATTY | 5 cut(s) | 338, 495, 737, 1144, 1237 |
| XceI | RCATGY | 3 cut(s) | 763, 963, 1480 |
| XspI | CTAG | 3 cut(s) | 518, 852, 954 |