TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 221 - 362 | 1.7e-10 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 113 |
| Acc16I | TGCGCA | 1 cut(s) | 173 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 641 |
| AccBSI | CCGCTC | 1 cut(s) | 596 |
| AccII | CGCG | 1 cut(s) | 128 |
| AccIII | TCCGGA | 2 cut(s) | 256, 733 |
| AciI | CCGC | 4 cut(s) | 53, 128, 586, 594 |
| AclWI | GGATC | 1 cut(s) | 744 |
| AcoI | YGGCCR | 1 cut(s) | 591 |
| AcsI | RAATTY | 2 cut(s) | 675, 936 |
| AfaI | GTAC | 3 cut(s) | 432, 983, 1073 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 641, 1017 |
| AflII | CTTAAG | 1 cut(s) | 350 |
| AgsI | TTSAA | 7 cut(s) | 576, 691, 698, 791, 977, 1024, 1087 |
| AjnI | CCWGG | 1 cut(s) | 664 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 986, 1018 |
| AleI | CACNNNNGTG | 2 cut(s) | 642, 644 |
| AluBI | AGCT | 5 cut(s) | 22, 251, 355, 727, 1173 |
| AluI | AGCT | 5 cut(s) | 22, 251, 355, 727, 1173 |
| AlwI | GGATC | 1 cut(s) | 744 |
| Aor13HI | TCCGGA | 2 cut(s) | 256, 733 |
| AoxI | GGCC | 2 cut(s) | 591, 1060 |
| ApeKI | GCWGC | 1 cut(s) | 19 |
| ApoI | RAATTY | 2 cut(s) | 675, 936 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 956, 988 |
| AseI | ATTAAT | 2 cut(s) | 339, 366 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 571 |
| AspLEI | GCGC | 2 cut(s) | 128, 174 |
| AspS9I | GGNCC | 1 cut(s) | 1060 |
| AsuHPI | GGTGA | 2 cut(s) | 484, 896 |
| AsuII | TTCGAA | 1 cut(s) | 992 |
| BauI | CACGAG | 1 cut(s) | 927 |
| BbsI | GAAGAC | 1 cut(s) | 317 |
| BbvI | GCAGC | 1 cut(s) | 31 |
| BccI | CCATC | 1 cut(s) | 757 |
| BceAI | ACGGC | 1 cut(s) | 1047 |
| BciT130I | CCWGG | 1 cut(s) | 666 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BfrI | CTTAAG | 1 cut(s) | 350 |
| BglII | AGATCT | 1 cut(s) | 403 |
| BisI | GCNGC | 3 cut(s) | 20, 53, 594 |
| BlsI | GCNGC | 3 cut(s) | 21, 54, 595 |
| Bme1390I | CCNGG | 1 cut(s) | 666 |
| BmgT120I | GGNCC | 1 cut(s) | 1060 |
| BmiI | GGNNCC | 1 cut(s) | 1061 |
| BmrFI | CCNGG | 1 cut(s) | 666 |
| BmsI | GCATC | 4 cut(s) | 108, 110, 220, 397 |
| BpiI | GAAGAC | 1 cut(s) | 317 |
| Bpu10I | CCTNAGC | 1 cut(s) | 581 |
| Bpu14I | TTCGAA | 1 cut(s) | 992 |
| BpuEI | CTTGAG | 1 cut(s) | 1187 |
| BsaAI | YACGTR | 1 cut(s) | 290 |
| BsaBI | GATNNNNATC | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 1 cut(s) | 665 |
| BsaWI | WCCGGW | 2 cut(s) | 256, 733 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 641, 1017 |
| Bse1I | ACTGG | 1 cut(s) | 646 |
| Bse8I | GATNNNNATC | 1 cut(s) | 234 |
| BseAI | TCCGGA | 2 cut(s) | 256, 733 |
| BseBI | CCWGG | 1 cut(s) | 666 |
| BseDI | CCNNGG | 1 cut(s) | 665 |
| BseGI | GGATG | 3 cut(s) | 123, 265, 768 |
| BseJI | GATNNNNATC | 1 cut(s) | 234 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 641, 1017 |
| BseMII | CTCAG | 3 cut(s) | 94, 473, 611 |
| BseNI | ACTGG | 1 cut(s) | 646 |
| BseRI | GAGGAG | 3 cut(s) | 1154, 1157, 1160 |
| BseXI | GCAGC | 1 cut(s) | 31 |
| Bsh1236I | CGCG | 1 cut(s) | 128 |
| BshFI | GGCC | 2 cut(s) | 593, 1062 |
| BsiSI | CCGG | 2 cut(s) | 257, 734 |
| BsiWI | CGTACG | 1 cut(s) | 430 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 641, 1017 |
| BsnI | GGCC | 2 cut(s) | 593, 1062 |
| Bsp119I | TTCGAA | 1 cut(s) | 992 |
| Bsp13I | TCCGGA | 2 cut(s) | 256, 733 |
| Bsp143I | GATC | 3 cut(s) | 403, 736, 901 |
| BspACI | CCGC | 4 cut(s) | 53, 128, 586, 594 |
| BspANI | GGCC | 2 cut(s) | 593, 1062 |
| BspCNI | CTCAG | 3 cut(s) | 93, 474, 610 |
| BspEI | TCCGGA | 2 cut(s) | 256, 733 |
| BspFNI | CGCG | 1 cut(s) | 128 |
| BspLI | GGNNCC | 1 cut(s) | 1061 |
| BspPI | GGATC | 1 cut(s) | 744 |
| BspT104I | TTCGAA | 1 cut(s) | 992 |
| BspTI | CTTAAG | 1 cut(s) | 350 |
| BsrBI | CCGCTC | 1 cut(s) | 596 |
| BsrI | ACTGG | 1 cut(s) | 646 |
| BssECI | CCNNGG | 1 cut(s) | 665 |
| BssMI | GATC | 3 cut(s) | 403, 736, 901 |
| BssSI | CACGAG | 1 cut(s) | 927 |
| Bst2BI | CACGAG | 1 cut(s) | 927 |
| Bst2UI | CCWGG | 1 cut(s) | 666 |
| Bst4CI | ACNGT | 3 cut(s) | 721, 1045, 1055 |
| BstAFI | CTTAAG | 1 cut(s) | 350 |
| BstBAI | YACGTR | 1 cut(s) | 290 |
| BstBI | TTCGAA | 1 cut(s) | 992 |
| BstC8I | GCNNGC | 2 cut(s) | 130, 357 |
| BstDEI | CTNAG | 6 cut(s) | 42, 80, 302, 482, 581, 597 |
| BstF5I | GGATG | 3 cut(s) | 123, 265, 768 |
| BstFNI | CGCG | 1 cut(s) | 128 |
| BstHHI | GCGC | 2 cut(s) | 128, 174 |
| BstKTI | GATC | 3 cut(s) | 406, 739, 904 |
| BstMBI | GATC | 3 cut(s) | 403, 736, 901 |
| BstNI | CCWGG | 1 cut(s) | 666 |
| BstSCI | CCNGG | 1 cut(s) | 664 |
| BstSNI | TACGTA | 1 cut(s) | 290 |
| BstUI | CGCG | 1 cut(s) | 128 |
| BstV1I | GCAGC | 1 cut(s) | 31 |
| BstV2I | GAAGAC | 1 cut(s) | 317 |
| BstX2I | RGATCY | 1 cut(s) | 403 |
| BstYI | RGATCY | 1 cut(s) | 403 |
| BsuRI | GGCC | 2 cut(s) | 593, 1062 |
| BtgZI | GCGATG | 1 cut(s) | 87 |
| BtsCI | GGATG | 3 cut(s) | 123, 265, 768 |
| BtsIMutI | CAGTG | 1 cut(s) | 639 |
| Cac8I | GCNNGC | 2 cut(s) | 130, 357 |
| CfoI | GCGC | 2 cut(s) | 128, 174 |
| Cfr13I | GGNCC | 1 cut(s) | 1060 |
| Csp6I | GTAC | 3 cut(s) | 431, 982, 1072 |
| CviAII | CATG | 4 cut(s) | 175, 747, 1032, 1209 |
| CviQI | GTAC | 3 cut(s) | 431, 982, 1072 |
| DdeI | CTNAG | 6 cut(s) | 42, 80, 302, 482, 581, 597 |
| DpnI | GATC | 3 cut(s) | 405, 738, 903 |
| DpnII | GATC | 3 cut(s) | 403, 736, 901 |
| EaeI | YGGCCR | 1 cut(s) | 591 |
| Eco105I | TACGTA | 1 cut(s) | 290 |
| EcoRII | CCWGG | 1 cut(s) | 664 |
| FaeI | CATG | 4 cut(s) | 178, 750, 1035, 1212 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 891, 923, 1173, 1205 |
| FatI | CATG | 4 cut(s) | 174, 746, 1031, 1208 |
| FauI | CCCGC | 1 cut(s) | 121 |
| FauNDI | CATATG | 1 cut(s) | 69 |
| Fnu4HI | GCNGC | 3 cut(s) | 20, 53, 594 |
| FokI | GGATG | 3 cut(s) | 130, 272, 775 |
| Fsp4HI | GCNGC | 3 cut(s) | 20, 53, 594 |
| FspBI | CTAG | 1 cut(s) | 89 |
| FspI | TGCGCA | 1 cut(s) | 173 |
| GlaI | GCGC | 2 cut(s) | 127, 173 |
| GluI | GCNGC | 3 cut(s) | 20, 53, 594 |
| HaeIII | GGCC | 2 cut(s) | 593, 1062 |
| HapII | CCGG | 2 cut(s) | 257, 734 |
| HhaI | GCGC | 2 cut(s) | 128, 174 |
| Hin1II | CATG | 4 cut(s) | 178, 750, 1035, 1212 |
| Hin6I | GCGC | 2 cut(s) | 126, 172 |
| HinP1I | GCGC | 2 cut(s) | 126, 172 |
| HincII | GTYRAC | 2 cut(s) | 219, 544 |
| HindII | GTYRAC | 2 cut(s) | 219, 544 |
| HindIII | AAGCTT | 1 cut(s) | 353 |
| HpaI | GTTAAC | 1 cut(s) | 219 |
| HpaII | CCGG | 2 cut(s) | 257, 734 |
| HphI | GGTGA | 2 cut(s) | 484, 896 |
| Hpy166II | GTNNAC | 4 cut(s) | 219, 544, 1072, 1130 |
| Hpy188I | TCNGA | 3 cut(s) | 469, 483, 1195 |
| Hpy188III | TCNNGA | 7 cut(s) | 161, 257, 652, 734, 929, 941, 1127 |
| Hpy8I | GTNNAC | 4 cut(s) | 219, 544, 1072, 1130 |
| HpyAV | CCTTC | 9 cut(s) | 70, 74, 195, 545, 549, 917, 971, 1098, 1151 |
| HpyCH4III | ACNGT | 3 cut(s) | 721, 1045, 1055 |
| HpyCH4IV | ACGT | 2 cut(s) | 289, 429 |
| HpyCH4V | TGCA | 2 cut(s) | 101, 381 |
| HpyF3I | CTNAG | 6 cut(s) | 42, 80, 302, 482, 581, 597 |
| HpySE526I | ACGT | 2 cut(s) | 289, 429 |
| Hsp92II | CATG | 4 cut(s) | 178, 750, 1035, 1212 |
| HspAI | GCGC | 2 cut(s) | 126, 172 |
| Kpn2I | TCCGGA | 2 cut(s) | 256, 733 |
| KspAI | GTTAAC | 1 cut(s) | 219 |
| Kzo9I | GATC | 3 cut(s) | 403, 736, 901 |
| LmnI | GCTCC | 2 cut(s) | 248, 724 |
| LpnPI | CCDG | 9 cut(s) | 174, 270, 414, 627, 651, 678, 747, 819, 926 |
| Lsp1109I | GCAGC | 1 cut(s) | 31 |
| LweI | GCATC | 4 cut(s) | 108, 110, 220, 397 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MaeII | ACGT | 2 cut(s) | 289, 429 |
| MaeIII | GTNAC | 2 cut(s) | 600, 929 |
| MalI | GATC | 3 cut(s) | 405, 738, 903 |
| MbiI | CCGCTC | 1 cut(s) | 596 |
| MboI | GATC | 3 cut(s) | 403, 736, 901 |
| MboII | GAAGA | 5 cut(s) | 162, 317, 398, 1060, 1091 |
| MfeI | CAATTG | 3 cut(s) | 376, 395, 526 |
| MflI | RGATCY | 1 cut(s) | 403 |
| MlyI | GAGTC | 5 cut(s) | 14, 166, 221, 1132, 1194 |
| MroI | TCCGGA | 2 cut(s) | 256, 733 |
| MroXI | GAANNNNTTC | 1 cut(s) | 571 |
| MseI | TTAA | 8 cut(s) | 218, 339, 351, 366, 455, 476, 515, 716 |
| MslI | CAYNNNNRTG | 2 cut(s) | 642, 644 |
| MspCI | CTTAAG | 1 cut(s) | 350 |
| MspI | CCGG | 2 cut(s) | 257, 734 |
| MspR9I | CCNGG | 1 cut(s) | 666 |
| MunI | CAATTG | 3 cut(s) | 376, 395, 526 |
| MvaI | CCWGG | 1 cut(s) | 666 |
| MvnI | CGCG | 1 cut(s) | 128 |
| NdeI | CATATG | 1 cut(s) | 69 |
| NdeII | GATC | 3 cut(s) | 403, 736, 901 |
| NlaIII | CATG | 4 cut(s) | 178, 750, 1035, 1212 |
| NlaIV | GGNNCC | 1 cut(s) | 1061 |
| NmeAIII | GCCGAG | 1 cut(s) | 835 |
| NmuCI | GTSAC | 1 cut(s) | 929 |
| NsbI | TGCGCA | 1 cut(s) | 173 |
| NspV | TTCGAA | 1 cut(s) | 992 |
| OliI | CACNNNNGTG | 2 cut(s) | 642, 644 |
| PdmI | GAANNNNTTC | 1 cut(s) | 571 |
| PfeI | GAWTC | 5 cut(s) | 489, 627, 802, 1007, 1184 |
| Pfl23II | CGTACG | 1 cut(s) | 430 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 641 |
| PkrI | GCNGC | 3 cut(s) | 21, 54, 595 |
| PleI | GAGTC | 5 cut(s) | 13, 165, 220, 1131, 1194 |
| PpsI | GAGTC | 5 cut(s) | 13, 165, 220, 1131, 1194 |
| Ppu21I | YACGTR | 1 cut(s) | 290 |
| PshBI | ATTAAT | 2 cut(s) | 339, 366 |
| PsiI | TTATAA | 1 cut(s) | 113 |
| Psp6I | CCWGG | 1 cut(s) | 664 |
| PspGI | CCWGG | 1 cut(s) | 664 |
| PspLI | CGTACG | 1 cut(s) | 430 |
| PspN4I | GGNNCC | 1 cut(s) | 1061 |
| PspPI | GGNCC | 1 cut(s) | 1060 |
| PsuI | RGATCY | 1 cut(s) | 403 |
| RsaI | GTAC | 3 cut(s) | 432, 983, 1073 |
| RsaNI | GTAC | 3 cut(s) | 431, 982, 1072 |
| RseI | CAYNNNNRTG | 2 cut(s) | 642, 644 |
| SaqAI | TTAA | 8 cut(s) | 218, 339, 351, 366, 455, 476, 515, 716 |
| SatI | GCNGC | 3 cut(s) | 20, 53, 594 |
| Sau3AI | GATC | 3 cut(s) | 403, 736, 901 |
| Sau96I | GGNCC | 1 cut(s) | 1060 |
| SchI | GAGTC | 5 cut(s) | 14, 166, 221, 1132, 1194 |
| ScrFI | CCNGG | 1 cut(s) | 666 |
| SfaNI | GCATC | 4 cut(s) | 108, 110, 220, 397 |
| SfuI | TTCGAA | 1 cut(s) | 992 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 642, 644 |
| SmlI | CTYRAG | 2 cut(s) | 350, 1202 |
| SmoI | CTYRAG | 2 cut(s) | 350, 1202 |
| SnaBI | TACGTA | 1 cut(s) | 290 |
| SsiI | CCGC | 4 cut(s) | 53, 128, 586, 594 |
| SspI | AATATT | 2 cut(s) | 562, 694 |
| SspMI | CTAG | 1 cut(s) | 89 |
| StyD4I | CCNGG | 1 cut(s) | 664 |
| TaaI | ACNGT | 3 cut(s) | 721, 1045, 1055 |
| TaiI | ACGT | 2 cut(s) | 292, 432 |
| TaqI | TCGA | 6 cut(s) | 651, 832, 992, 1037, 1095, 1162 |
| TauI | GCSGC | 2 cut(s) | 55, 596 |
| TfiI | GAWTC | 5 cut(s) | 489, 627, 802, 1007, 1184 |
| Tru1I | TTAA | 8 cut(s) | 218, 339, 351, 366, 455, 476, 515, 716 |
| Tru9I | TTAA | 8 cut(s) | 218, 339, 351, 366, 455, 476, 515, 716 |
| TscAI | CASTG | 1 cut(s) | 646 |
| TseFI | GTSAC | 1 cut(s) | 929 |
| TseI | GCWGC | 1 cut(s) | 19 |
| Tsp45I | GTSAC | 1 cut(s) | 929 |
| TspDTI | ATGAA | 5 cut(s) | 56, 86, 352, 564, 1113 |
| TspGWI | ACGGA | 1 cut(s) | 1135 |
| TspRI | CASTG | 1 cut(s) | 646 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 641 |
| Vha464I | CTTAAG | 1 cut(s) | 350 |
| VspI | ATTAAT | 2 cut(s) | 339, 366 |
| XapI | RAATTY | 2 cut(s) | 675, 936 |
| XmnI | GAANNNNTTC | 1 cut(s) | 571 |
| XspI | CTAG | 1 cut(s) | 89 |