TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CRAL_TRIO | PF00650 | 5 - 84 | 1.2e-14 | CRAL/TRIO domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 353, 363 |
| AclWI | GGATC | 3 cut(s) | 179, 297, 308 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AcyI | GRCGYC | 1 cut(s) | 330 |
| AgsI | TTSAA | 3 cut(s) | 115, 239, 299 |
| AjnI | CCWGG | 1 cut(s) | 325 |
| Alw21I | GWGCWC | 1 cut(s) | 167 |
| Alw26I | GTCTC | 2 cut(s) | 101, 341 |
| AlwI | GGATC | 3 cut(s) | 179, 297, 308 |
| ApeKI | GCWGC | 2 cut(s) | 289, 359 |
| AseI | ATTAAT | 1 cut(s) | 207 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 176 |
| AsuHPI | GGTGA | 2 cut(s) | 230, 266 |
| BbsI | GAAGAC | 1 cut(s) | 325 |
| Bbv12I | GWGCWC | 1 cut(s) | 167 |
| BbvI | GCAGC | 2 cut(s) | 276, 346 |
| BccI | CCATC | 1 cut(s) | 249 |
| BciT130I | CCWGG | 1 cut(s) | 327 |
| BcoDI | GTCTC | 2 cut(s) | 101, 341 |
| BfaI | CTAG | 1 cut(s) | 252 |
| BisI | GCNGC | 3 cut(s) | 290, 360, 363 |
| BlsI | GCNGC | 3 cut(s) | 291, 361, 364 |
| Bme1390I | CCNGG | 1 cut(s) | 327 |
| BmiI | GGNNCC | 2 cut(s) | 38, 324 |
| BmrFI | CCNGG | 1 cut(s) | 327 |
| BmrI | ACTGGG | 1 cut(s) | 333 |
| BmsI | GCATC | 2 cut(s) | 238, 415 |
| BmuI | ACTGGG | 1 cut(s) | 333 |
| BpiI | GAAGAC | 1 cut(s) | 325 |
| BpuEI | CTTGAG | 1 cut(s) | 26 |
| BsaHI | GRCGYC | 1 cut(s) | 330 |
| BsaJI | CCNNGG | 1 cut(s) | 214 |
| Bse1I | ACTGG | 1 cut(s) | 339 |
| BseBI | CCWGG | 1 cut(s) | 327 |
| BseDI | CCNNGG | 1 cut(s) | 214 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BseNI | ACTGG | 1 cut(s) | 339 |
| BseXI | GCAGC | 2 cut(s) | 276, 346 |
| BsiHKAI | GWGCWC | 1 cut(s) | 167 |
| BsmAI | GTCTC | 2 cut(s) | 101, 341 |
| Bsp1286I | GDGCHC | 1 cut(s) | 167 |
| Bsp143I | GATC | 3 cut(s) | 184, 302, 313 |
| BspACI | CCGC | 2 cut(s) | 353, 363 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspLI | GGNNCC | 2 cut(s) | 38, 324 |
| BspPI | GGATC | 3 cut(s) | 179, 297, 308 |
| BsrI | ACTGG | 1 cut(s) | 339 |
| BssECI | CCNNGG | 1 cut(s) | 214 |
| BssMI | GATC | 3 cut(s) | 184, 302, 313 |
| BssNI | GRCGYC | 1 cut(s) | 330 |
| BssT1I | CCWWGG | 1 cut(s) | 214 |
| Bst2UI | CCWGG | 1 cut(s) | 327 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| BstACI | GRCGYC | 1 cut(s) | 330 |
| BstDEI | CTNAG | 1 cut(s) | 105 |
| BstKTI | GATC | 3 cut(s) | 187, 305, 316 |
| BstMAI | GTCTC | 2 cut(s) | 101, 341 |
| BstMBI | GATC | 3 cut(s) | 184, 302, 313 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 359 |
| BstNI | CCWGG | 1 cut(s) | 327 |
| BstNSI | RCATGY | 1 cut(s) | 273 |
| BstSCI | CCNGG | 1 cut(s) | 325 |
| BstV1I | GCAGC | 2 cut(s) | 276, 346 |
| BstV2I | GAAGAC | 1 cut(s) | 325 |
| BstX2I | RGATCY | 1 cut(s) | 313 |
| BstYI | RGATCY | 1 cut(s) | 313 |
| BtsI | GCAGTG | 1 cut(s) | 22 |
| BtsIMutI | CAGTG | 2 cut(s) | 22, 165 |
| CseI | GACGC | 1 cut(s) | 319 |
| CviAII | CATG | 2 cut(s) | 16, 270 |
| CviJI | RGCY | 5 cut(s) | 39, 259, 289, 325, 370 |
| CviKI_1 | RGCY | 5 cut(s) | 39, 259, 289, 325, 370 |
| DdeI | CTNAG | 1 cut(s) | 105 |
| DpnI | GATC | 3 cut(s) | 186, 304, 315 |
| DpnII | GATC | 3 cut(s) | 184, 302, 313 |
| Eco130I | CCWWGG | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| EcoRII | CCWGG | 1 cut(s) | 325 |
| EcoT14I | CCWWGG | 1 cut(s) | 214 |
| ErhI | CCWWGG | 1 cut(s) | 214 |
| FaeI | CATG | 2 cut(s) | 19, 273 |
| FaiI | YATR | 3 cut(s) | 17, 122, 271 |
| FatI | CATG | 2 cut(s) | 15, 269 |
| Fnu4HI | GCNGC | 3 cut(s) | 290, 360, 363 |
| Fsp4HI | GCNGC | 3 cut(s) | 290, 360, 363 |
| FspBI | CTAG | 1 cut(s) | 252 |
| GluI | GCNGC | 3 cut(s) | 290, 360, 363 |
| HgaI | GACGC | 1 cut(s) | 319 |
| Hin1I | GRCGYC | 1 cut(s) | 330 |
| Hin1II | CATG | 2 cut(s) | 19, 273 |
| HphI | GGTGA | 2 cut(s) | 230, 266 |
| Hpy188I | TCNGA | 2 cut(s) | 81, 418 |
| Hpy188III | TCNNGA | 1 cut(s) | 104 |
| HpyAV | CCTTC | 2 cut(s) | 86, 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 359 |
| HpyF3I | CTNAG | 1 cut(s) | 105 |
| Hsp92I | GRCGYC | 1 cut(s) | 330 |
| Hsp92II | CATG | 2 cut(s) | 19, 273 |
| Kzo9I | GATC | 3 cut(s) | 184, 302, 313 |
| LmnI | GCTCC | 3 cut(s) | 36, 162, 322 |
| LpnPI | CCDG | 8 cut(s) | 19, 117, 123, 129, 312, 339, 352, 381 |
| Lsp1109I | GCAGC | 2 cut(s) | 276, 346 |
| LweI | GCATC | 2 cut(s) | 238, 415 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeIII | GTNAC | 3 cut(s) | 218, 231, 272 |
| MalI | GATC | 3 cut(s) | 186, 304, 315 |
| MboI | GATC | 3 cut(s) | 184, 302, 313 |
| MboII | GAAGA | 1 cut(s) | 325 |
| MflI | RGATCY | 1 cut(s) | 313 |
| MhlI | GDGCHC | 1 cut(s) | 167 |
| MluCI | AATT | 3 cut(s) | 115, 243, 387 |
| MnlI | CCTC | 3 cut(s) | 3, 50, 288 |
| MroXI | GAANNNNTTC | 1 cut(s) | 176 |
| MseI | TTAA | 3 cut(s) | 207, 309, 424 |
| MspA1I | CMGCKG | 1 cut(s) | 353 |
| MspR9I | CCNGG | 1 cut(s) | 327 |
| MvaI | CCWGG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 359 |
| NdeII | GATC | 3 cut(s) | 184, 302, 313 |
| NlaIII | CATG | 2 cut(s) | 19, 273 |
| NlaIV | GGNNCC | 2 cut(s) | 38, 324 |
| NmuCI | GTSAC | 2 cut(s) | 218, 272 |
| NspI | RCATGY | 1 cut(s) | 273 |
| PdmI | GAANNNNTTC | 1 cut(s) | 176 |
| PkrI | GCNGC | 3 cut(s) | 291, 361, 364 |
| PshBI | ATTAAT | 1 cut(s) | 207 |
| Psp6I | CCWGG | 1 cut(s) | 325 |
| PspGI | CCWGG | 1 cut(s) | 325 |
| PspN4I | GGNNCC | 2 cut(s) | 38, 324 |
| PsuI | RGATCY | 1 cut(s) | 313 |
| SaqAI | TTAA | 3 cut(s) | 207, 309, 424 |
| SatI | GCNGC | 3 cut(s) | 290, 360, 363 |
| Sau3AI | GATC | 3 cut(s) | 184, 302, 313 |
| ScrFI | CCNGG | 1 cut(s) | 327 |
| SduI | GDGCHC | 1 cut(s) | 167 |
| SfaNI | GCATC | 2 cut(s) | 238, 415 |
| SmlI | CTYRAG | 1 cut(s) | 41 |
| SmoI | CTYRAG | 1 cut(s) | 41 |
| Sse9I | AATT | 3 cut(s) | 115, 243, 387 |
| SsiI | CCGC | 2 cut(s) | 353, 363 |
| SspMI | CTAG | 1 cut(s) | 252 |
| StyD4I | CCNGG | 1 cut(s) | 325 |
| StyI | CCWWGG | 1 cut(s) | 214 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TasI | AATT | 3 cut(s) | 115, 243, 387 |
| TauI | GCSGC | 1 cut(s) | 365 |
| Tru1I | TTAA | 3 cut(s) | 207, 309, 424 |
| Tru9I | TTAA | 3 cut(s) | 207, 309, 424 |
| TscAI | CASTG | 2 cut(s) | 29, 172 |
| TseFI | GTSAC | 2 cut(s) | 218, 272 |
| TseI | GCWGC | 2 cut(s) | 289, 359 |
| Tsp45I | GTSAC | 2 cut(s) | 218, 272 |
| TspDTI | ATGAA | 1 cut(s) | 32 |
| TspRI | CASTG | 2 cut(s) | 29, 172 |
| VspI | ATTAAT | 1 cut(s) | 207 |
| XceI | RCATGY | 1 cut(s) | 273 |
| XmnI | GAANNNNTTC | 1 cut(s) | 176 |
| XspI | CTAG | 1 cut(s) | 252 |