TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1145 |
| AarI | CACCTGC | 1 cut(s) | 1416 |
| AatII | GACGTC | 2 cut(s) | 642, 1458 |
| Acc36I | ACCTGC | 2 cut(s) | 1416, 1614 |
| AccB1I | GGYRCC | 1 cut(s) | 2391 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1381 |
| AccBSI | CCGCTC | 1 cut(s) | 698 |
| AccI | GTMKAC | 3 cut(s) | 1533, 2335, 2439 |
| AciI | CCGC | 4 cut(s) | 643, 669, 698, 1399 |
| AclWI | GGATC | 4 cut(s) | 152, 338, 2877, 2920 |
| AcoI | YGGCCR | 3 cut(s) | 2353, 2472, 2799 |
| AcsI | RAATTY | 7 cut(s) | 288, 481, 585, 728, 2090, 2485, 2612 |
| AcuI | CTGAAG | 5 cut(s) | 830, 1131, 1509, 1607, 2280 |
| AcyI | GRCGYC | 2 cut(s) | 639, 1455 |
| AfaI | GTAC | 5 cut(s) | 357, 1182, 1272, 2654, 2906 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 745, 1381, 1612, 2481, 2668, 2772 |
| AflIII | ACRYGT | 2 cut(s) | 1462, 1741 |
| AjiI | CACGTC | 1 cut(s) | 1543 |
| AjnI | CCWGG | 2 cut(s) | 2629, 2698 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 564, 596, 1107, 1139 |
| AleI | CACNNNNGTG | 1 cut(s) | 2920 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1296, 1328 |
| Alw21I | GWGCWC | 2 cut(s) | 2593, 2895 |
| Alw26I | GTCTC | 2 cut(s) | 1242, 1413 |
| Alw44I | GTGCAC | 1 cut(s) | 2891 |
| AlwI | GGATC | 4 cut(s) | 152, 338, 2877, 2920 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1705 |
| AoxI | GGCC | 3 cut(s) | 2353, 2472, 2799 |
| ApaLI | GTGCAC | 1 cut(s) | 2891 |
| ApeKI | GCWGC | 4 cut(s) | 203, 322, 1705, 2692 |
| ApoI | RAATTY | 7 cut(s) | 288, 481, 585, 728, 2090, 2485, 2612 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2158, 2190 |
| AseI | ATTAAT | 2 cut(s) | 2784, 3102 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1091, 1119, 1626 |
| AspLEI | GCGC | 1 cut(s) | 3203 |
| AspS9I | GGNCC | 2 cut(s) | 3031, 3206 |
| AsuHPI | GGTGA | 3 cut(s) | 92, 2112, 2767 |
| AsuII | TTCGAA | 1 cut(s) | 3068 |
| AvaII | GGWCC | 2 cut(s) | 3031, 3206 |
| AxyI | CCTNAGG | 1 cut(s) | 1611 |
| BaeGI | GKGCMC | 1 cut(s) | 2895 |
| BalI | TGGCCA | 1 cut(s) | 2474 |
| BanI | GGYRCC | 1 cut(s) | 2391 |
| BauI | CACGAG | 1 cut(s) | 2822 |
| BbsI | GAAGAC | 6 cut(s) | 1154, 1357, 1458, 1904, 2286, 2667 |
| Bbv12I | GWGCWC | 2 cut(s) | 2593, 2895 |
| BbvI | GCAGC | 4 cut(s) | 190, 309, 1692, 2679 |
| BccI | CCATC | 3 cut(s) | 1380, 2431, 2716 |
| BceAI | ACGGC | 2 cut(s) | 1666, 2814 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1274, 1308, 2175, 2209 |
| BciT130I | CCWGG | 2 cut(s) | 2631, 2700 |
| BciVI | GTATCC | 1 cut(s) | 1674 |
| BcoDI | GTCTC | 2 cut(s) | 1242, 1413 |
| BfaI | CTAG | 7 cut(s) | 578, 993, 1355, 2364, 2772, 3147, 3210 |
| BfuAI | ACCTGC | 2 cut(s) | 1416, 1614 |
| BfuI | GTATCC | 1 cut(s) | 1674 |
| BglII | AGATCT | 2 cut(s) | 1325, 1948 |
| BisI | GCNGC | 4 cut(s) | 204, 323, 1706, 2693 |
| BlsI | GCNGC | 4 cut(s) | 205, 324, 1707, 2694 |
| BmcAI | AGTACT | 2 cut(s) | 1182, 1272 |
| Bme1390I | CCNGG | 2 cut(s) | 2631, 2700 |
| Bme18I | GGWCC | 2 cut(s) | 3031, 3206 |
| BmgBI | CACGTC | 1 cut(s) | 1543 |
| BmgT120I | GGNCC | 2 cut(s) | 3031, 3206 |
| BmiI | GGNNCC | 5 cut(s) | 856, 1604, 2393, 2882, 3032 |
| BmrFI | CCNGG | 2 cut(s) | 2631, 2700 |
| BmrI | ACTGGG | 4 cut(s) | 1193, 1250, 2268, 2980 |
| BmsI | GCATC | 9 cut(s) | 32, 263, 436, 1048, 1350, 2358, 2704, 3043, 3152 |
| BmuI | ACTGGG | 4 cut(s) | 1193, 1250, 2268, 2980 |
| BpiI | GAAGAC | 6 cut(s) | 1154, 1357, 1458, 1904, 2286, 2667 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 211, 243, 698, 730, 700, 732 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| Bpu14I | TTCGAA | 1 cut(s) | 3068 |
| BpuEI | CTTGAG | 4 cut(s) | 577, 1091, 1925, 2600 |
| BsaAI | YACGTR | 2 cut(s) | 2890, 2904 |
| BsaBI | GATNNNNATC | 3 cut(s) | 342, 1953, 2310 |
| BsaHI | GRCGYC | 2 cut(s) | 639, 1455 |
| BsaJI | CCNNGG | 2 cut(s) | 2480, 2908 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 745, 1381, 1612, 2481, 2668, 2772 |
| Bse21I | CCTNAGG | 1 cut(s) | 1611 |
| Bse3DI | GCAATG | 3 cut(s) | 2267, 2489, 3119 |
| Bse8I | GATNNNNATC | 3 cut(s) | 342, 1953, 2310 |
| BseBI | CCWGG | 2 cut(s) | 2631, 2700 |
| BseDI | CCNNGG | 2 cut(s) | 2480, 2908 |
| BseJI | GATNNNNATC | 3 cut(s) | 342, 1953, 2310 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 745, 1381, 1612, 2481, 2668, 2772 |
| BseMI | GCAATG | 3 cut(s) | 2267, 2489, 3119 |
| BseMII | CTCAG | 5 cut(s) | 23, 59, 1712, 2329, 2334 |
| BseRI | GAGGAG | 7 cut(s) | 33, 751, 1793, 1837, 2006, 2050, 3074 |
| BseSI | GKGCMC | 1 cut(s) | 2895 |
| BseXI | GCAGC | 4 cut(s) | 190, 309, 1692, 2679 |
| BseYI | CCCAGC | 1 cut(s) | 1420 |
| BsgI | GTGCAG | 2 cut(s) | 1278, 1450 |
| BshFI | GGCC | 3 cut(s) | 2355, 2474, 2801 |
| BshNI | GGYRCC | 1 cut(s) | 2391 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2593, 2895 |
| BsiSI | CCGG | 4 cut(s) | 1084, 1775, 1988, 2183 |
| BslFI | GGGAC | 1 cut(s) | 1629 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 745, 1381, 1612, 2481, 2668, 2772 |
| BsmAI | GTCTC | 2 cut(s) | 1242, 1413 |
| BsmFI | GGGAC | 1 cut(s) | 1629 |
| BsmI | GAATGC | 2 cut(s) | 1091, 2218 |
| BsnI | GGCC | 3 cut(s) | 2355, 2474, 2801 |
| Bsp119I | TTCGAA | 1 cut(s) | 3068 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2593, 2895 |
| Bsp143I | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| BspACI | CCGC | 4 cut(s) | 643, 669, 698, 1399 |
| BspANI | GGCC | 3 cut(s) | 2355, 2474, 2801 |
| BspCNI | CTCAG | 5 cut(s) | 22, 60, 1711, 2328, 2335 |
| BspHI | TCATGA | 3 cut(s) | 397, 718, 3229 |
| BspLI | GGNNCC | 5 cut(s) | 856, 1604, 2393, 2882, 3032 |
| BspMI | ACCTGC | 2 cut(s) | 1416, 1614 |
| BspPI | GGATC | 4 cut(s) | 152, 338, 2877, 2920 |
| BspQI | GCTCTTC | 1 cut(s) | 3171 |
| BspT104I | TTCGAA | 1 cut(s) | 3068 |
| BspT107I | GGYRCC | 1 cut(s) | 2391 |
| BsrBI | CCGCTC | 1 cut(s) | 698 |
| BsrDI | GCAATG | 3 cut(s) | 2267, 2489, 3119 |
| BssECI | CCNNGG | 2 cut(s) | 2480, 2908 |
| BssMI | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| BssNI | GRCGYC | 2 cut(s) | 639, 1455 |
| BssSI | CACGAG | 1 cut(s) | 2822 |
| BssT1I | CCWWGG | 2 cut(s) | 2480, 2908 |
| Bst2BI | CACGAG | 1 cut(s) | 2822 |
| Bst2UI | CCWGG | 2 cut(s) | 2631, 2700 |
| Bst4CI | ACNGT | 9 cut(s) | 1180, 1226, 1339, 2391, 2516, 2686, 2897, 2939, 3128 |
| Bst6I | CTCTTC | 3 cut(s) | 417, 1240, 3171 |
| BstACI | GRCGYC | 2 cut(s) | 639, 1455 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 200, 1369 |
| BstBAI | YACGTR | 2 cut(s) | 2890, 2904 |
| BstBI | TTCGAA | 1 cut(s) | 3068 |
| BstC8I | GCNNGC | 2 cut(s) | 832, 1859 |
| BstDEI | CTNAG | 8 cut(s) | 9, 68, 1611, 1698, 1715, 2240, 2315, 2343 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1610 |
| BstHHI | GCGC | 1 cut(s) | 3203 |
| BstKTI | GATC | 8 cut(s) | 160, 346, 1258, 1328, 1593, 1951, 2872, 2915 |
| BstMAI | GTCTC | 2 cut(s) | 1242, 1413 |
| BstMBI | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 200, 209, 827, 1369, 3096, 3161 |
| BstNI | CCWGG | 2 cut(s) | 2631, 2700 |
| BstNSI | RCATGY | 4 cut(s) | 1466, 1745, 1861, 2921 |
| BstSCI | CCNGG | 2 cut(s) | 2629, 2698 |
| BstSLI | GKGCMC | 1 cut(s) | 2895 |
| BstSNI | TACGTA | 1 cut(s) | 2904 |
| BstV1I | GCAGC | 4 cut(s) | 190, 309, 1692, 2679 |
| BstV2I | GAAGAC | 6 cut(s) | 1154, 1357, 1458, 1904, 2286, 2667 |
| BstX2I | RGATCY | 2 cut(s) | 1325, 1948 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3242 |
| BstYI | RGATCY | 2 cut(s) | 1325, 1948 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1611 |
| BsuI | GTATCC | 1 cut(s) | 1674 |
| BsuRI | GGCC | 3 cut(s) | 2355, 2474, 2801 |
| BtrI | CACGTC | 1 cut(s) | 1543 |
| BtsI | GCAGTG | 2 cut(s) | 117, 1927 |
| BtsIMutI | CAGTG | 6 cut(s) | 46, 117, 1231, 1927, 2281, 3133 |
| BveI | ACCTGC | 2 cut(s) | 1416, 1614 |
| Cac8I | GCNNGC | 2 cut(s) | 832, 1859 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1705 |
| CciI | TCATGA | 3 cut(s) | 397, 718, 3229 |
| CfoI | GCGC | 1 cut(s) | 3203 |
| Cfr13I | GGNCC | 2 cut(s) | 3031, 3206 |
| CseI | GACGC | 1 cut(s) | 2450 |
| Csp6I | GTAC | 5 cut(s) | 356, 1181, 1271, 2653, 2905 |
| CviQI | GTAC | 5 cut(s) | 356, 1181, 1271, 2653, 2905 |
| DdeI | CTNAG | 8 cut(s) | 9, 68, 1611, 1698, 1715, 2240, 2315, 2343 |
| DpnI | GATC | 8 cut(s) | 159, 345, 1257, 1327, 1592, 1950, 2871, 2914 |
| DpnII | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| DraI | TTTAAA | 2 cut(s) | 1201, 2310 |
| EaeI | YGGCCR | 3 cut(s) | 2353, 2472, 2799 |
| Eam1104I | CTCTTC | 3 cut(s) | 417, 1240, 3171 |
| EarI | CTCTTC | 3 cut(s) | 417, 1240, 3171 |
| EciI | GGCGGA | 1 cut(s) | 1388 |
| Eco105I | TACGTA | 1 cut(s) | 2904 |
| Eco130I | CCWWGG | 2 cut(s) | 2480, 2908 |
| Eco32I | GATATC | 1 cut(s) | 2932 |
| Eco47I | GGWCC | 2 cut(s) | 3031, 3206 |
| Eco57I | CTGAAG | 5 cut(s) | 830, 1131, 1509, 1607, 2280 |
| Eco81I | CCTNAGG | 1 cut(s) | 1611 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1610 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3206 |
| EcoRI | GAATTC | 4 cut(s) | 288, 481, 2090, 2485 |
| EcoRII | CCWGG | 2 cut(s) | 2629, 2698 |
| EcoRV | GATATC | 1 cut(s) | 2932 |
| EcoT14I | CCWWGG | 2 cut(s) | 2480, 2908 |
| EcoT22I | ATGCAT | 2 cut(s) | 256, 2434 |
| ErhI | CCWWGG | 2 cut(s) | 2480, 2908 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1107, 1139 |
| FaqI | GGGAC | 1 cut(s) | 1629 |
| FauI | CCCGC | 1 cut(s) | 662 |
| FblI | GTMKAC | 3 cut(s) | 1533, 2335, 2439 |
| Fnu4HI | GCNGC | 4 cut(s) | 204, 323, 1706, 2693 |
| Fsp4HI | GCNGC | 4 cut(s) | 204, 323, 1706, 2693 |
| FspBI | CTAG | 7 cut(s) | 578, 993, 1355, 2364, 2772, 3147, 3210 |
| GlaI | GCGC | 1 cut(s) | 3202 |
| GluI | GCNGC | 4 cut(s) | 204, 323, 1706, 2693 |
| GsaI | CCCAGC | 1 cut(s) | 1424 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HaeIII | GGCC | 3 cut(s) | 2355, 2474, 2801 |
| HapII | CCGG | 4 cut(s) | 1084, 1775, 1988, 2183 |
| HgaI | GACGC | 1 cut(s) | 2450 |
| HhaI | GCGC | 1 cut(s) | 3203 |
| Hin1I | GRCGYC | 2 cut(s) | 639, 1455 |
| Hin6I | GCGC | 1 cut(s) | 3201 |
| HinP1I | GCGC | 1 cut(s) | 3201 |
| HincII | GTYRAC | 3 cut(s) | 2512, 2858, 2942 |
| HindII | GTYRAC | 3 cut(s) | 2512, 2858, 2942 |
| HindIII | AAGCTT | 4 cut(s) | 1808, 1973, 2021, 2399 |
| HpaII | CCGG | 4 cut(s) | 1084, 1775, 1988, 2183 |
| HphI | GGTGA | 3 cut(s) | 92, 2112, 2767 |
| Hpy188I | TCNGA | 8 cut(s) | 12, 69, 352, 1551, 1701, 1749, 2260, 2406 |
| HpyAV | CCTTC | 9 cut(s) | 45, 397, 749, 845, 854, 1033, 1493, 1859, 3128 |
| HpyCH4III | ACNGT | 9 cut(s) | 1180, 1226, 1339, 2391, 2516, 2686, 2897, 2939, 3128 |
| HpyCH4IV | ACGT | 7 cut(s) | 639, 880, 1455, 1542, 2468, 2889, 2903 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 200, 209, 827, 1369, 3096, 3161 |
| HpyF3I | CTNAG | 8 cut(s) | 9, 68, 1611, 1698, 1715, 2240, 2315, 2343 |
| HpySE526I | ACGT | 7 cut(s) | 639, 880, 1455, 1542, 2468, 2889, 2903 |
| Hsp92I | GRCGYC | 2 cut(s) | 639, 1455 |
| HspAI | GCGC | 1 cut(s) | 3201 |
| Kzo9I | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| LguI | GCTCTTC | 1 cut(s) | 3171 |
| LmnI | GCTCC | 5 cut(s) | 764, 854, 1377, 1759, 3061 |
| Lsp1109I | GCAGC | 4 cut(s) | 190, 309, 1692, 2679 |
| LweI | GCATC | 9 cut(s) | 32, 263, 436, 1048, 1350, 2358, 2704, 3043, 3152 |
| MaeI | CTAG | 7 cut(s) | 578, 993, 1355, 2364, 2772, 3147, 3210 |
| MaeII | ACGT | 7 cut(s) | 639, 880, 1455, 1542, 2468, 2889, 2903 |
| MaeIII | GTNAC | 8 cut(s) | 881, 1261, 1543, 1683, 2174, 2243, 2711, 3128 |
| MalI | GATC | 8 cut(s) | 159, 345, 1257, 1327, 1592, 1950, 2871, 2914 |
| MbiI | CCGCTC | 1 cut(s) | 698 |
| MboI | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MflI | RGATCY | 2 cut(s) | 1325, 1948 |
| MhlI | GDGCHC | 2 cut(s) | 2593, 2895 |
| MlsI | TGGCCA | 1 cut(s) | 2474 |
| MluNI | TGGCCA | 1 cut(s) | 2474 |
| MlyI | GAGTC | 5 cut(s) | 1415, 1508, 1532, 1540, 2593 |
| MmeI | TCCRAC | 2 cut(s) | 562, 2847 |
| Mox20I | TGGCCA | 1 cut(s) | 2474 |
| Mph1103I | ATGCAT | 2 cut(s) | 256, 2434 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1091, 1119, 1626 |
| MscI | TGGCCA | 1 cut(s) | 2474 |
| MslI | CAYNNNNRTG | 5 cut(s) | 262, 1508, 1541, 2560, 2920 |
| Msp20I | TGGCCA | 1 cut(s) | 2474 |
| MspI | CCGG | 4 cut(s) | 1084, 1775, 1988, 2183 |
| MspR9I | CCNGG | 2 cut(s) | 2631, 2700 |
| MunI | CAATTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 2 cut(s) | 1091, 2218 |
| MvaI | CCWGG | 2 cut(s) | 2631, 2700 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 200, 209, 827, 1369, 3096, 3161 |
| NdeII | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| NlaIV | GGNNCC | 5 cut(s) | 856, 1604, 2393, 2882, 3032 |
| NmuCI | GTSAC | 6 cut(s) | 881, 1543, 1683, 2174, 2243, 3128 |
| NsiI | ATGCAT | 2 cut(s) | 256, 2434 |
| NspI | RCATGY | 4 cut(s) | 1466, 1745, 1861, 2921 |
| NspV | TTCGAA | 1 cut(s) | 3068 |
| OliI | CACNNNNGTG | 1 cut(s) | 2920 |
| PaeI | GCATGC | 1 cut(s) | 1861 |
| PagI | TCATGA | 3 cut(s) | 397, 718, 3229 |
| PaqCI | CACCTGC | 1 cut(s) | 1416 |
| PciI | ACATGT | 2 cut(s) | 1462, 1741 |
| PciSI | GCTCTTC | 1 cut(s) | 3171 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1664, 2986 |
| PctI | GAATGC | 2 cut(s) | 1091, 2218 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1091, 1119, 1626 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1381 |
| PfoI | TCCNGGA | 1 cut(s) | 2629 |
| PkrI | GCNGC | 4 cut(s) | 205, 324, 1707, 2694 |
| PleI | GAGTC | 5 cut(s) | 1414, 1508, 1531, 1540, 2592 |
| PpsI | GAGTC | 5 cut(s) | 1414, 1508, 1531, 1540, 2592 |
| Ppu21I | YACGTR | 2 cut(s) | 2890, 2904 |
| PpuMI | RGGWCCY | 1 cut(s) | 3206 |
| PscI | ACATGT | 2 cut(s) | 1462, 1741 |
| PshBI | ATTAAT | 2 cut(s) | 2784, 3102 |
| PsiI | TTATAA | 1 cut(s) | 1145 |
| Psp5II | RGGWCCY | 1 cut(s) | 3206 |
| Psp6I | CCWGG | 2 cut(s) | 2629, 2698 |
| PspFI | CCCAGC | 1 cut(s) | 1420 |
| PspGI | CCWGG | 2 cut(s) | 2629, 2698 |
| PspN4I | GGNNCC | 5 cut(s) | 856, 1604, 2393, 2882, 3032 |
| PspPI | GGNCC | 2 cut(s) | 3031, 3206 |
| PspPPI | RGGWCCY | 1 cut(s) | 3206 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1705 |
| PsuI | RGATCY | 2 cut(s) | 1325, 1948 |
| RsaI | GTAC | 5 cut(s) | 357, 1182, 1272, 2654, 2906 |
| RsaNI | GTAC | 5 cut(s) | 356, 1181, 1271, 2653, 2905 |
| RseI | CAYNNNNRTG | 5 cut(s) | 262, 1508, 1541, 2560, 2920 |
| SapI | GCTCTTC | 1 cut(s) | 3171 |
| SatI | GCNGC | 4 cut(s) | 204, 323, 1706, 2693 |
| Sau3AI | GATC | 8 cut(s) | 157, 343, 1255, 1325, 1590, 1948, 2869, 2912 |
| Sau96I | GGNCC | 2 cut(s) | 3031, 3206 |
| ScaI | AGTACT | 2 cut(s) | 1182, 1272 |
| SchI | GAGTC | 5 cut(s) | 1415, 1508, 1532, 1540, 2593 |
| ScrFI | CCNGG | 2 cut(s) | 2631, 2700 |
| SduI | GDGCHC | 2 cut(s) | 2593, 2895 |
| SfaNI | GCATC | 9 cut(s) | 32, 263, 436, 1048, 1350, 2358, 2704, 3043, 3152 |
| SfuI | TTCGAA | 1 cut(s) | 3068 |
| SinI | GGWCC | 2 cut(s) | 3031, 3206 |
| SmiI | ATTTAAAT | 1 cut(s) | 2310 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 262, 1508, 1541, 2560, 2920 |
| SmlI | CTYRAG | 4 cut(s) | 592, 1070, 1904, 2579 |
| SmoI | CTYRAG | 4 cut(s) | 592, 1070, 1904, 2579 |
| SnaBI | TACGTA | 1 cut(s) | 2904 |
| SphI | GCATGC | 1 cut(s) | 1861 |
| SsiI | CCGC | 4 cut(s) | 643, 669, 698, 1399 |
| SspI | AATATT | 2 cut(s) | 938, 3094 |
| SspMI | CTAG | 7 cut(s) | 578, 993, 1355, 2364, 2772, 3147, 3210 |
| StyD4I | CCNGG | 2 cut(s) | 2629, 2698 |
| StyI | CCWWGG | 2 cut(s) | 2480, 2908 |
| SwaI | ATTTAAAT | 1 cut(s) | 2310 |
| TaaI | ACNGT | 9 cut(s) | 1180, 1226, 1339, 2391, 2516, 2686, 2897, 2939, 3128 |
| TaiI | ACGT | 7 cut(s) | 642, 883, 1458, 1545, 2471, 2892, 2906 |
| TaqI | TCGA | 7 cut(s) | 218, 260, 1044, 1258, 2587, 2678, 3068 |
| TatI | WGTACW | 2 cut(s) | 1180, 1270 |
| TscAI | CASTG | 6 cut(s) | 53, 124, 1231, 1927, 2281, 3133 |
| TseFI | GTSAC | 6 cut(s) | 881, 1543, 1683, 2174, 2243, 3128 |
| TseI | GCWGC | 4 cut(s) | 203, 322, 1705, 2692 |
| Tsp45I | GTSAC | 6 cut(s) | 881, 1543, 1683, 2174, 2243, 3128 |
| TspGWI | ACGGA | 7 cut(s) | 503, 761, 1362, 1656, 1657, 1772, 3023 |
| TspRI | CASTG | 6 cut(s) | 53, 124, 1231, 1927, 2281, 3133 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1381 |
| VneI | GTGCAC | 1 cut(s) | 2891 |
| VpaK11BI | GGWCC | 2 cut(s) | 3031, 3206 |
| VspI | ATTAAT | 2 cut(s) | 2784, 3102 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1610 |
| XapI | RAATTY | 7 cut(s) | 288, 481, 585, 728, 2090, 2485, 2612 |
| XbaI | TCTAGA | 1 cut(s) | 2363 |
| XceI | RCATGY | 4 cut(s) | 1466, 1745, 1861, 2921 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2430 |
| XmiI | GTMKAC | 3 cut(s) | 1533, 2335, 2439 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1091, 1119, 1626 |
| XspI | CTAG | 7 cut(s) | 578, 993, 1355, 2364, 2772, 3147, 3210 |
| ZraI | GACGTC | 2 cut(s) | 640, 1456 |
| ZrmI | AGTACT | 2 cut(s) | 1182, 1272 |
| Zsp2I | ATGCAT | 2 cut(s) | 256, 2434 |